View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18481_low_19 (Length: 402)

Name: NF18481_low_19
Description: NF18481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18481_low_19
NF18481_low_19
[»] chr7 (43 HSPs)
chr7 (1-89)||(3622448-3622536)
chr7 (2-89)||(48459744-48459831)
chr7 (2-89)||(42740426-42740513)
chr7 (5-89)||(37562607-37562691)
chr7 (20-89)||(3750738-3750807)
chr7 (2-89)||(3375524-3375611)
chr7 (3-89)||(37639465-37639551)
chr7 (3-89)||(43631684-43631769)
chr7 (2-87)||(32205959-32206044)
chr7 (2-89)||(386469-386556)
chr7 (2-89)||(3342824-3342911)
chr7 (2-89)||(44967387-44967474)
chr7 (6-89)||(47217529-47217612)
chr7 (3-89)||(10371946-10372032)
chr7 (5-89)||(38230105-38230189)
chr7 (2-78)||(39391136-39391212)
chr7 (2-85)||(12632075-12632158)
chr7 (2-89)||(43737927-43738014)
chr7 (20-89)||(47021971-47022040)
chr7 (2-89)||(42904587-42904674)
chr7 (2-89)||(46541634-46541721)
chr7 (6-87)||(34365972-34366052)
chr7 (2-86)||(9456139-9456222)
chr7 (6-86)||(24770902-24770982)
chr7 (2-89)||(34010374-34010460)
chr7 (3-89)||(36920166-36920252)
chr7 (25-78)||(39634164-39634217)
chr7 (25-78)||(42752190-42752243)
chr7 (5-89)||(41715694-41715778)
chr7 (5-80)||(32186977-32187052)
chr7 (2-77)||(37008351-37008425)
chr7 (6-89)||(48134618-48134700)
chr7 (2-89)||(34010949-34011036)
chr7 (28-77)||(38494276-38494325)
chr7 (25-86)||(39977609-39977670)
chr7 (29-89)||(12964659-12964719)
chr7 (26-78)||(16079460-16079512)
chr7 (28-76)||(20088929-20088977)
chr7 (25-76)||(4228604-4228655)
chr7 (2-76)||(1766459-1766533)
chr7 (2-76)||(33746423-33746497)
chr7 (45-89)||(19097474-19097518)
chr7 (25-77)||(29829310-29829362)
[»] chr4 (69 HSPs)
chr4 (1-89)||(39636782-39636870)
chr4 (2-89)||(42944899-42944986)
chr4 (2-89)||(49136520-49136607)
chr4 (2-89)||(49519728-49519815)
chr4 (5-89)||(16566306-16566390)
chr4 (1-89)||(43772124-43772212)
chr4 (2-89)||(46830070-46830157)
chr4 (5-89)||(6138621-6138705)
chr4 (1-89)||(19592232-19592320)
chr4 (2-89)||(4954052-4954139)
chr4 (2-89)||(13167523-13167610)
chr4 (2-89)||(14564147-14564234)
chr4 (2-89)||(25312713-25312800)
chr4 (6-89)||(29149308-29149391)
chr4 (2-89)||(43781520-43781606)
chr4 (2-89)||(48550428-48550515)
chr4 (2-89)||(51922938-51923025)
chr4 (2-89)||(54150524-54150611)
chr4 (25-89)||(15619635-15619699)
chr4 (2-86)||(26651852-26651936)
chr4 (6-89)||(6505203-6505286)
chr4 (2-89)||(15603358-15603445)
chr4 (6-89)||(46926050-46926133)
chr4 (2-89)||(48407699-48407785)
chr4 (23-89)||(33574197-33574263)
chr4 (3-89)||(39187733-39187819)
chr4 (2-89)||(9889336-9889422)
chr4 (6-89)||(14054853-14054936)
chr4 (2-89)||(14076013-14076099)
chr4 (2-89)||(19599497-19599583)
chr4 (2-89)||(30842130-30842216)
chr4 (2-89)||(38263897-38263984)
chr4 (26-89)||(41866176-41866239)
chr4 (3-89)||(26426116-26426201)
chr4 (11-89)||(55638756-55638834)
chr4 (6-86)||(31520375-31520454)
chr4 (25-89)||(48908295-48908358)
chr4 (2-89)||(9893709-9893796)
chr4 (14-89)||(28987029-28987103)
chr4 (2-81)||(56241844-56241923)
chr4 (6-76)||(2175161-2175231)
chr4 (20-89)||(54153061-54153129)
chr4 (25-89)||(32238060-32238123)
chr4 (5-89)||(48550218-48550302)
chr4 (6-89)||(13183051-13183134)
chr4 (2-89)||(54735652-54735738)
chr4 (20-89)||(14072519-14072587)
chr4 (25-78)||(38306032-38306085)
chr4 (29-78)||(54488630-54488679)
chr4 (25-89)||(54487221-54487285)
chr4 (23-77)||(33843801-33843855)
chr4 (25-78)||(22699763-22699816)
chr4 (25-78)||(22980714-22980767)
chr4 (25-78)||(22994301-22994354)
chr4 (24-89)||(36150624-36150689)
chr4 (4-89)||(45780011-45780095)
chr4 (25-89)||(16492948-16493012)
chr4 (25-89)||(53914920-53914983)
chr4 (28-77)||(28947762-28947811)
chr4 (25-78)||(39993574-39993627)
chr4 (28-89)||(46958047-46958108)
chr4 (28-89)||(53532001-53532062)
chr4 (26-89)||(523172-523235)
chr4 (2-89)||(38694046-38694133)
chr4 (25-76)||(38740316-38740367)
chr4 (5-84)||(8683034-8683115)
chr4 (2-64)||(8754156-8754217)
chr4 (8-61)||(17898085-17898138)
chr4 (2-79)||(30887165-30887241)
[»] chr8 (49 HSPs)
chr8 (2-89)||(3097207-3097294)
chr8 (2-89)||(3467554-3467641)
chr8 (2-89)||(25697961-25698047)
chr8 (2-89)||(40742145-40742232)
chr8 (2-89)||(6399109-6399196)
chr8 (3-86)||(22936797-22936880)
chr8 (2-89)||(42143365-42143452)
chr8 (2-89)||(440190-440277)
chr8 (2-89)||(4941782-4941869)
chr8 (6-89)||(25497717-25497799)
chr8 (2-89)||(26243145-26243232)
chr8 (2-89)||(44926862-44926948)
chr8 (3-81)||(43550913-43550991)
chr8 (2-87)||(8124992-8125076)
chr8 (32-89)||(30759306-30759363)
chr8 (2-78)||(28425484-28425560)
chr8 (2-89)||(15206717-15206804)
chr8 (2-89)||(41289059-41289146)
chr8 (5-76)||(42149029-42149100)
chr8 (25-89)||(38114489-38114552)
chr8 (2-86)||(38152179-38152262)
chr8 (2-89)||(24897589-24897675)
chr8 (2-89)||(27649767-27649853)
chr8 (2-89)||(33627035-33627122)
chr8 (25-78)||(31246327-31246380)
chr8 (25-89)||(40742296-40742360)
chr8 (20-89)||(36121546-36121614)
chr8 (25-76)||(19649230-19649281)
chr8 (2-89)||(36114042-36114128)
chr8 (30-76)||(10552923-10552969)
chr8 (25-78)||(26490977-26491030)
chr8 (2-71)||(34342873-34342941)
chr8 (25-84)||(32767481-32767538)
chr8 (24-84)||(39219764-39219824)
chr8 (6-76)||(1373064-1373134)
chr8 (24-78)||(36779434-36779488)
chr8 (28-78)||(42600968-42601018)
chr8 (25-89)||(30081652-30081715)
chr8 (5-89)||(35615733-35615817)
chr8 (21-89)||(37667059-37667126)
chr8 (1-89)||(40792205-40792292)
chr8 (2-77)||(37458312-37458386)
chr8 (27-89)||(2071569-2071630)
chr8 (55-89)||(30085640-30085674)
chr8 (52-89)||(3465441-3465478)
chr8 (23-84)||(27746231-27746292)
chr8 (25-78)||(33588764-33588817)
chr8 (25-89)||(23018140-23018204)
chr8 (26-78)||(38516343-38516395)
[»] chr2 (50 HSPs)
chr2 (5-89)||(9988500-9988584)
chr2 (5-89)||(1945038-1945122)
chr2 (2-89)||(2213669-2213756)
chr2 (2-89)||(7472673-7472759)
chr2 (2-89)||(31224702-31224789)
chr2 (6-89)||(2213532-2213615)
chr2 (6-89)||(7296181-7296264)
chr2 (1-84)||(26207933-26208016)
chr2 (6-89)||(27911432-27911515)
chr2 (2-89)||(28261316-28261403)
chr2 (6-86)||(28127289-28127369)
chr2 (5-84)||(5916246-5916324)
chr2 (5-84)||(36312302-36312380)
chr2 (2-89)||(39141469-39141555)
chr2 (6-89)||(44619060-44619143)
chr2 (20-89)||(2215292-2215361)
chr2 (28-89)||(30007552-30007613)
chr2 (12-89)||(36548231-36548308)
chr2 (25-89)||(34433305-34433369)
chr2 (25-89)||(41580709-41580773)
chr2 (25-89)||(45714667-45714731)
chr2 (2-89)||(25747881-25747967)
chr2 (20-86)||(38600445-38600511)
chr2 (3-89)||(42515975-42516060)
chr2 (2-80)||(42089536-42089618)
chr2 (2-76)||(16467108-16467182)
chr2 (28-82)||(28641690-28641744)
chr2 (25-89)||(3853945-3854009)
chr2 (25-89)||(7295347-7295411)
chr2 (25-89)||(8170358-8170421)
chr2 (25-89)||(32502031-32502094)
chr2 (2-89)||(14821185-14821271)
chr2 (6-89)||(23358284-23358367)
chr2 (27-89)||(31562686-31562747)
chr2 (12-89)||(8041311-8041387)
chr2 (25-78)||(23359940-23359993)
chr2 (25-84)||(30599908-30599967)
chr2 (23-86)||(34997238-34997301)
chr2 (4-79)||(39106678-39106753)
chr2 (25-89)||(18511147-18511211)
chr2 (26-77)||(10918649-10918700)
chr2 (25-76)||(12110919-12110970)
chr2 (25-76)||(23377549-23377600)
chr2 (5-79)||(43436290-43436364)
chr2 (6-76)||(3654794-3654865)
chr2 (52-89)||(23267363-23267400)
chr2 (25-78)||(26806265-26806318)
chr2 (2-62)||(11240693-11240753)
chr2 (29-65)||(25940264-25940300)
chr2 (24-76)||(42770408-42770460)
[»] chr6 (21 HSPs)
chr6 (2-89)||(10826104-10826191)
chr6 (5-89)||(16442351-16442435)
chr6 (2-89)||(13739219-13739305)
chr6 (2-89)||(13744719-13744805)
chr6 (2-89)||(33899006-33899093)
chr6 (5-79)||(16548155-16548229)
chr6 (30-89)||(17829999-17830058)
chr6 (2-89)||(29409252-29409339)
chr6 (2-89)||(6208064-6208150)
chr6 (2-89)||(21254880-21254966)
chr6 (2-87)||(1312442-1312527)
chr6 (26-89)||(699594-699656)
chr6 (2-89)||(31132477-31132563)
chr6 (1-89)||(5584050-5584137)
chr6 (25-84)||(29682203-29682262)
chr6 (25-90)||(882778-882843)
chr6 (4-89)||(21455897-21455980)
chr6 (8-76)||(10874222-10874290)
chr6 (52-89)||(15151506-15151543)
chr6 (8-76)||(1499975-1500043)
chr6 (29-89)||(16122002-16122062)
[»] chr5 (42 HSPs)
chr5 (2-89)||(39987965-39988052)
chr5 (2-89)||(8049049-8049136)
chr5 (5-89)||(22482219-22482303)
chr5 (2-89)||(32030741-32030828)
chr5 (1-86)||(41834918-41835003)
chr5 (6-89)||(3667885-3667968)
chr5 (2-89)||(27021156-27021242)
chr5 (2-89)||(32454564-32454650)
chr5 (8-89)||(40885244-40885325)
chr5 (1-89)||(10058100-10058188)
chr5 (3-86)||(4292177-4292260)
chr5 (2-89)||(9275482-9275569)
chr5 (2-89)||(13253081-13253167)
chr5 (6-89)||(35760220-35760303)
chr5 (6-89)||(40495356-40495439)
chr5 (3-89)||(40791068-40791153)
chr5 (3-89)||(42146336-42146421)
chr5 (2-86)||(3060225-3060308)
chr5 (2-86)||(7385933-7386017)
chr5 (2-90)||(16158462-16158550)
chr5 (2-89)||(7714967-7715054)
chr5 (26-89)||(24045881-24045944)
chr5 (2-89)||(2430295-2430381)
chr5 (25-87)||(5710386-5710448)
chr5 (25-77)||(2483724-2483776)
chr5 (2-89)||(7178805-7178891)
chr5 (2-89)||(23914252-23914339)
chr5 (2-60)||(28869530-28869588)
chr5 (25-78)||(22811076-22811129)
chr5 (30-89)||(34106945-34107004)
chr5 (6-89)||(41740591-41740674)
chr5 (20-89)||(33953900-33953968)
chr5 (26-77)||(19784864-19784915)
chr5 (3-89)||(20068942-20069028)
chr5 (24-89)||(24036622-24036687)
chr5 (26-78)||(2868362-2868414)
chr5 (25-89)||(33467990-33468054)
chr5 (2-89)||(2861668-2861754)
chr5 (37-78)||(4569089-4569130)
chr5 (29-78)||(5969956-5970005)
chr5 (52-89)||(35847888-35847925)
chr5 (45-89)||(16843599-16843643)
[»] chr1 (53 HSPs)
chr1 (2-89)||(42850221-42850308)
chr1 (2-89)||(48510945-48511032)
chr1 (2-89)||(31223411-31223498)
chr1 (2-89)||(43728880-43728966)
chr1 (5-89)||(20800279-20800363)
chr1 (5-89)||(35569204-35569288)
chr1 (2-89)||(47123423-47123510)
chr1 (3-89)||(1199865-1199951)
chr1 (25-89)||(15884287-15884351)
chr1 (2-89)||(4369805-4369891)
chr1 (2-89)||(7826356-7826443)
chr1 (29-89)||(49242984-49243044)
chr1 (2-89)||(5410677-5410763)
chr1 (2-89)||(11561859-11561946)
chr1 (1-89)||(36205227-36205315)
chr1 (2-89)||(6166147-6166233)
chr1 (6-89)||(12468253-12468336)
chr1 (2-88)||(25230044-25230129)
chr1 (3-77)||(40229484-40229558)
chr1 (6-87)||(13056039-13056119)
chr1 (6-89)||(12247461-12247543)
chr1 (2-89)||(50406167-50406254)
chr1 (25-87)||(50977344-50977406)
chr1 (25-89)||(10470650-10470713)
chr1 (25-89)||(11023332-11023395)
chr1 (5-89)||(27801654-27801738)
chr1 (1-76)||(13931659-13931733)
chr1 (2-89)||(23628708-23628794)
chr1 (2-89)||(34718488-34718575)
chr1 (2-89)||(45710086-45710172)
chr1 (6-79)||(291729-291802)
chr1 (25-78)||(4347034-4347087)
chr1 (5-89)||(26058281-26058365)
chr1 (2-77)||(25061263-25061338)
chr1 (30-89)||(47085898-47085957)
chr1 (3-69)||(9447571-9447636)
chr1 (24-77)||(40352450-40352503)
chr1 (1-89)||(15576490-15576578)
chr1 (25-76)||(29759711-29759762)
chr1 (2-89)||(35536109-35536195)
chr1 (25-76)||(43730059-43730110)
chr1 (28-78)||(13344836-13344886)
chr1 (51-89)||(43134536-43134574)
chr1 (26-84)||(47978368-47978426)
chr1 (2-63)||(11051339-11051400)
chr1 (25-89)||(6219968-6220032)
chr1 (37-89)||(6464679-6464731)
chr1 (29-76)||(32365143-32365190)
chr1 (28-78)||(5930823-5930873)
chr1 (29-78)||(41989-42038)
chr1 (52-89)||(29441271-29441308)
chr1 (25-78)||(40709236-40709288)
chr1 (25-89)||(16556295-16556358)
[»] chr3 (54 HSPs)
chr3 (2-89)||(10853268-10853355)
chr3 (2-89)||(50664771-50664858)
chr3 (1-89)||(21225002-21225090)
chr3 (2-89)||(38172308-38172395)
chr3 (2-89)||(44224775-44224862)
chr3 (2-89)||(53074916-53075002)
chr3 (2-88)||(20813159-20813245)
chr3 (25-89)||(23496353-23496417)
chr3 (10-86)||(38340827-38340902)
chr3 (2-89)||(3348256-3348343)
chr3 (2-89)||(4984594-4984681)
chr3 (6-89)||(26519681-26519764)
chr3 (2-89)||(31084221-31084307)
chr3 (2-89)||(52966810-52966897)
chr3 (6-87)||(15511379-15511459)
chr3 (20-89)||(19877448-19877517)
chr3 (2-89)||(10334151-10334238)
chr3 (2-89)||(42318343-42318429)
chr3 (2-89)||(42475722-42475809)
chr3 (2-89)||(8424731-8424817)
chr3 (6-89)||(53179865-53179948)
chr3 (20-89)||(35425365-35425433)
chr3 (2-86)||(34561121-34561205)
chr3 (2-89)||(38125443-38125529)
chr3 (6-76)||(23207082-23207152)
chr3 (20-89)||(30811533-30811601)
chr3 (25-89)||(35930774-35930838)
chr3 (25-89)||(48189443-48189506)
chr3 (37-89)||(55154549-55154601)
chr3 (2-89)||(25848045-25848132)
chr3 (2-89)||(30809946-30810033)
chr3 (25-78)||(7012676-7012729)
chr3 (2-79)||(16246105-16246182)
chr3 (1-89)||(14651103-14651190)
chr3 (13-77)||(40415309-40415373)
chr3 (34-89)||(29716687-29716742)
chr3 (2-89)||(44939417-44939502)
chr3 (16-89)||(22737041-22737114)
chr3 (28-76)||(10852727-10852775)
chr3 (24-76)||(42644297-42644349)
chr3 (25-89)||(49526670-49526734)
chr3 (28-78)||(23918881-23918931)
chr3 (37-78)||(30736172-30736213)
chr3 (25-78)||(44225601-44225654)
chr3 (25-76)||(21023229-21023280)
chr3 (25-76)||(52931586-52931637)
chr3 (26-80)||(30301199-30301253)
chr3 (2-76)||(32357524-32357597)
chr3 (27-65)||(38626750-38626788)
chr3 (25-78)||(25181246-25181299)
chr3 (2-47)||(31618930-31618975)
chr3 (52-89)||(52813278-52813315)
chr3 (2-78)||(45423781-45423856)
chr3 (23-75)||(49330378-49330430)
[»] scaffold0005 (1 HSPs)
scaffold0005 (2-89)||(253141-253228)
[»] scaffold0369 (1 HSPs)
scaffold0369 (6-89)||(8466-8549)
[»] scaffold0381 (1 HSPs)
scaffold0381 (2-89)||(9124-9210)
[»] scaffold0983 (1 HSPs)
scaffold0983 (9-89)||(2269-2349)
[»] scaffold0394 (1 HSPs)
scaffold0394 (38-89)||(5831-5882)
[»] scaffold0014 (1 HSPs)
scaffold0014 (2-89)||(118411-118498)
[»] scaffold0007 (1 HSPs)
scaffold0007 (20-86)||(29127-29192)
[»] scaffold0217 (1 HSPs)
scaffold0217 (6-89)||(2028-2111)
[»] scaffold0172 (1 HSPs)
scaffold0172 (25-76)||(15271-15322)
[»] scaffold0009 (1 HSPs)
scaffold0009 (28-78)||(199381-199431)
[»] scaffold0015 (1 HSPs)
scaffold0015 (24-76)||(65535-65587)
[»] scaffold0003 (1 HSPs)
scaffold0003 (26-89)||(301562-301625)
[»] scaffold0031 (1 HSPs)
scaffold0031 (28-76)||(99701-99749)


Alignment Details
Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 3622536 - 3622448
Alignment:
Q  1 gtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3622536 gtaagaatcacttttaagtaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 3622448  T

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Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 48459744 - 48459831
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48459744 taagaatcacttttaagtaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 48459831  T

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Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 42740426 - 42740513
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  42740426 taagaatcacttttaagtaagtatatctaaacataaatcaattaacattcaacttacttttaaccaaaatcaattctctcaaactcaa 42740513  T

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Target: chr7; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 37562607 - 37562691
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  37562607 gaatcacttttaaataagtgtatccaaacataaatcaattcacatccaactcacttttaacaaaaatcaattctcttaaactcaa 37562691  T

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Target: chr7; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 3750738 - 3750807
Alignment:
Q  20 aagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3750738 aagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 3750807  T

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Target: chr7; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 3375524 - 3375611
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||||    
T  3375524 taagaatcacttttaagtgagtgtatccaaacacaaatcaattcacaccaaactcacttttaaccaaaattaattctctcaaactcaa 3375611  T

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Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 37639465 - 37639551
Alignment:
Q  3 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||  |||| | ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  37639465 aagaatcacttttaataaagtttctccaaacataaatcaattcacattcaattcacttttaaccaaaatcaattctctcaaactcaa 37639551  T

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Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 43631769 - 43631684
Alignment:
Q  3 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||| |||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  43631769 aagaatcacttttaattaagcatatccaaacataa-tcaattcatatctaactcacttttaaccaaaatcaattctctcaaactcaa 43631684  T

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Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 32205959 - 32206044
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactc 87  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||  |||||||||||| ||||||||    
T  32205959 taagaatcacttttaagtaagtgtatccaaacataaatcaattcacatcaaacccacttttaattaaaatcaattctttcaaactc 32206044  T

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Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 386556 - 386469
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||  || ||||||||||||||||||||||||||||| || || ||||||||||||||||||| |||||||||||||    
T  386556 taagaatcacttttcggttagtatatccaaacataaatcaattcacattcagctaacttttaaccaaaatcaatactctcaaactcaa 386469  T

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Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 3342824 - 3342911
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| ||   |||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  3342824 taagaatcacttctattaaagtgtatccaaacataaatcaattcatatccaactcacttttaactaaaatcaattctctcaaactcaa 3342911  T

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Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 44967474 - 44967387
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| ||   |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44967474 taagaatcacttctattaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 44967387  T

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Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 47217612 - 47217529
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||  |||  ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  47217612 aatcacttttaagcgagtgcatccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaattctctcaaactcaa 47217529  T

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Target: chr7; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 10372032 - 10371946
Alignment:
Q  3 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||| |||  || | || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10372032 aagaatcacttctaataaactgtaaccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 10371946  T

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Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 38230105 - 38230189
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||  || | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||    
T  38230105 gaatcacttttaataaaatgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctcttaaattcaa 38230189  T

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Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 39391212 - 39391136
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    |||||||||||| |||| |||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  39391212 taagaatcacttgtaagaaagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattct 39391136  T

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Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 12632158 - 12632075
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaac 85  Q
    |||||||||||||||||  |||| |  |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  12632158 taagaatcacttttaagcgagtacactcaaacataaatcaattcacatctaactcacttttaaccaaaatctattctctcaaac 12632075  T

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Target: chr7; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 43738014 - 43737927
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||| ||| |||| |||||||| ||||||||||||||| ||||||||    
T  43738014 taagaatcacttttaaataagtttatccaaacaaaaatcaattcatatctaactaacttttaatcaaaatcaattctcttaaactcaa 43737927  T

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Target: chr7; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 47021971 - 47022040
Alignment:
Q  20 aagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| ||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||    
T  47021971 aagtgtatccaaacataaatcaattcactttcaacttacttttaaccaaaatcaattctctcaaactcaa 47022040  T

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Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 42904587 - 42904674
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||   ||| |||| ||||||||||||||||||||| |||||| ||||| |||||| ||||||||||||||||||    
T  42904587 taagaatcacttttaaacgagtgtatcaaaacataaatcaattcacatctaactcatttttatccaaaaacaattctctcaaactcaa 42904674  T

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Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 46541634 - 46541721
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||  || | ||||  |||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  46541634 taagaatcacttttcggtgaatatactcaaacataaaccaattcacattcaactcacttctaaccaaaatcaattctctcaaactcaa 46541721  T

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Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 34366052 - 34365972
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactc 87  Q
    |||||||||||| ||||  |||||||||||||||||||||||| |||||| ||||||||| |||||||||||| ||||||||    
T  34366052 aatcacttttaa-taagcgtatccaaacataaatcaattcacacccaactaacttttaactaaaatcaattctttcaaactc 34365972  T

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Target: chr7; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 9456139 - 9456222
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 86  Q
    ||||||||||||||||  |||| ||||||||||||| |||||| || || |||||||||||||||||||||||||||||| ||||    
T  9456139 taagaatcacttttaaacaagtgtatccaaacataa-tcaatttacctcaaactcacttttaaccaaaatcaattctctcgaact 9456222  T

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Target: chr7; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 24770982 - 24770902
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 86  Q
    |||||||||||  |  ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  24770982 aatcacttttagttttgtatatctaaatataaatcaatttacatccaactcacttttaaccaaaatcaattatctcaaact 24770902  T

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Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 34010374 - 34010460
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||| ||||||||| | ||| ||| ||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||||||||    
T  34010374 taagaaccacttttaaatgagtgtattcaaacataa-tcagttcatatccaactcacttttaaccaaaatcaattctttcaaactcaa 34010460  T

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Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 36920252 - 36920166
Alignment:
Q  3 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| ||||| |||   ||| |||||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||||||    
T  36920252 aagaatcacctttaattaaacgtattcaaacataaatcaatttatatctaactcacttttaaccaaaatcaattctttcaaactcaa 36920166  T

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Target: chr7; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 39634217 - 39634164
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  39634217 tatccaaacataaatcaattcatattcaactcacttttaaccaaaatcaattct 39634164  T

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Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 42752243 - 42752190
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  42752243 tatccaaacataaatcaattcacattcaactcacttttaacaaaaatcaattct 42752190  T

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Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 41715694 - 41715778
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| |||||||| | |||  ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| ||| ||||    
T  41715694 gaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaa 41715778  T

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Target: chr7; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 32186977 - 32187052
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctct 80  Q
    |||| |||||||| | |||  ||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||    
T  32186977 gaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctct 32187052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 37008425 - 37008351
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 77  Q
    |||||||||||| |||| |||| | ||||||||||||||||| ||| || ||||||||||||||||||||||||||    
T  37008425 taagaatcacttataagaaagtgtctccaaacataaatcaat-cacctcaaactcacttttaaccaaaatcaattc 37008351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 48134618 - 48134700
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||  |||| ||||||||||||| ||||||| | || ||| |||||||||| |||||||||||||||||||||||    
T  48134618 aatcacttttaaacaagtttatccaaacataa-tcaattctcctcaaacccacttttaacaaaaatcaattctctcaaactcaa 48134700  T

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Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 34011036 - 34010949
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcaca-tccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||| | | | ||||||||||||| |||| ||| || |||||||||| |||||||||||||| ||||||||||||    
T  34011036 taagaatcacttttaagtgaatgtttccaaacataaattaatttacactcaaactcacttt-aaccaaaatcaattttctcaaactcaa 34010949  T

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Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 38494276 - 38494325
Alignment:
Q  28 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 77  Q
    ||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  38494276 ccaaacataaaccacttcacattcaactcacttttaaccaaaatcaattc 38494325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 39977609 - 39977670
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 86  Q
    |||||||| ||||||||||||| ||| ||||||||||| || |||||||||||| |||||||    
T  39977609 tatccaaaaataaatcaattcatatcaaactcacttttgactaaaatcaattctttcaaact 39977670  T

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Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 12964659 - 12964719
Alignment:
Q  29 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||  |||| |||||||||| |||| |||||||||| ||||||||||||    
T  12964659 caaacataaatcaatctacattcaactcacttataacgaaaatcaattatctcaaactcaa 12964719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 16079460 - 16079512
Alignment:
Q  26 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    |||||||||||||||| ||  ||| ||||||||||| ||||||||||||||||    
T  16079460 atccaaacataaatcacttttcattcaactcactttaaaccaaaatcaattct 16079512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 20088929 - 20088977
Alignment:
Q  28 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    |||||||||||||| || || | ||||||||||||||||||||||||||    
T  20088929 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaatt 20088977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 4228604 - 4228655
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    ||||||||||||||||| ||  ||| |||||||||||||| |||||||||||    
T  4228604 tatccaaacataaatcacttttcattcaactcacttttaatcaaaatcaatt 4228655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 1766459 - 1766533
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    ||||||||||||||| || |   |||||||| ||||||||||| |  | |||||||||||||| |||||||||||    
T  1766459 taagaatcacttttatgttaaggtatccaaatataaatcaatttaggttcaactcacttttaatcaaaatcaatt 1766533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 33746423 - 33746497
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    ||||||||||  |||||| | | || ||||||| ||||||||| | || |||||||||||||| |||||||||||    
T  33746423 taagaatcacggttaagttaatgtaaccaaacaaaaatcaatttatattcaactcacttttaatcaaaatcaatt 33746497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 19097474 - 19097518
Alignment:
Q  45 cacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||| | ||||||||||| ||||||||||||| ||||||||||    
T  19097474 cacatctagctcacttttaatcaaaatcaattctttcaaactcaa 19097518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 29829362 - 29829310
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 77  Q
    ||||||||||||||||| || |||| ||||||| ||||| ||| |||||||||    
T  29829362 tatccaaacataaatcactttacattcaactcatttttagccagaatcaattc 29829310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 5e-38; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 39636782 - 39636870
Alignment:
Q  1 gtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39636782 gtaagaatcacttttaagtaagtgtatccaaacataaatcaattcacatccaactcacttttaatcaaaatcaattctctcaaactcaa 39636870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 42944986 - 42944899
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  42944986 taagaatcacttttaagtaagtatatctaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaa 42944899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 49136520 - 49136607
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  49136520 taagaatcacttttaagtgagtgtatccaaacataaatcaattcacatcaaactcacttttaaccataatcaattctctcaaactcaa 49136607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 49519728 - 49519815
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| ||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49519728 taagaatcatttttaagcaagtgtatccaaacataaataaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 49519815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 16566306 - 16566390
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16566306 gaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 16566390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43772212 - 43772124
Alignment:
Q  1 gtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| |||  |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43772212 gtaagaatcacttctaaaaaagtgtatccaaacataaatcgattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 43772124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 46830157 - 46830070
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  46830157 taagaatcaattttaagaaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattcacttaaactcaa 46830070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 6138705 - 6138621
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  6138705 gaatcatttttaaataagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattatttcaaactcaa 6138621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 19592320 - 19592232
Alignment:
Q  1 gtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||   |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  19592320 gtaagaatcacttttagtaaagtgtatccaaacataaatcaattcacttccaactcacttttaaccaaaatcaattctctaaaactcaa 19592232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 4954139 - 4954052
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||| ||  || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  4954139 taagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaaactcacttttaaccaaaatcaattctctcaaaatcaa 4954052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 13167523 - 13167610
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| |  || |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13167523 taagaatcacttttaaatgggtgtatccaaatataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 13167610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 14564234 - 14564147
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| | |   |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  14564234 taagaatcacttttaactgaaggtatccaaacataaatcaattcatatccaactcacatttaaccaaaatcaattctctcaaactcaa 14564147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 25312713 - 25312800
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||| |||||||  |||| |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  25312713 taagaatcgcttttaacaaagtgtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaa 25312800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 29149391 - 29149308
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  29149391 aatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaa 29149308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 43781606 - 43781520
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||  |||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  43781606 taagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 43781520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 48550515 - 48550428
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| ||   |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  48550515 taagaatcacttctattaaagtttatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctatcaaaatcaa 48550428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 51922938 - 51923025
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||| |||||||   |||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  51922938 taagaattacttttagtaaagtgtatccaaacataaatcaattcagattcaactcacttttaaccaaaatcaattctctcaaactcaa 51923025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 54150524 - 54150611
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| ||||||  |||| |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  54150524 taagaatcatttttaacgaagtgtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaa 54150611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 15619635 - 15619699
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15619635 tatccaaacatacatcaattcacatccaactcactttttaccaaaatcaattctctcaaactcaa 15619699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 26651936 - 26651852
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 86  Q
    ||||||| |||||||   |||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26651936 taagaattacttttagtaaagtgtatctaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaact 26651852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 6505203 - 6505286
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||  | ||| |||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  6505203 aatcacttttatatgagtgtatctaaacataaatcaattcacatcaaactcatttttaaccaaaatcaattctctcaaactcaa 6505286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 15603358 - 15603445
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| ||||||| ||||||||| ||||| ||||||||||||||| ||||||||||| |||| |||||||| ||||||||||||    
T  15603358 taagaatcatttttaagcaagtatatctaaacacaaatcaattcacatcaaactcactttttaccataatcaattatctcaaactcaa 15603445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 46926050 - 46926133
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||   ||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  46926050 aatcacttttaaacgagtgtatccaaacataaatcaattcacatctaactcacttttaaccaaaaacaattttctcaaactcaa 46926133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 48407785 - 48407699
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| ||  |||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  48407785 taagaatcactttcaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 48407699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 33574197 - 33574263
Alignment:
Q  23 tatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  33574197 tatattcaaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaa 33574263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 39187733 - 39187819
Alignment:
Q  3 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||| ||   |||| ||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||    
T  39187733 aagaatcacttctagtaaagtgtatccaaacataaatcaattcacattcaaattacttttaaccaaaatcaattctctcaaactcaa 39187819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 9889422 - 9889336
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| |||| ||| |||||||||||| | ||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  9889422 taagaatcactttcaagtgagtgtatccaaacatata-caattcatatctaactcacttttaatcaaaatcaattctctcaaactcaa 9889336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 14054853 - 14054936
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||  ||||| |||||||||||||||||||||||||| ||||||||||| || ||| |||||||| ||||||||||    
T  14054853 aatcacttttatataagtttatccaaacataaatcaattcacatcaaactcacttttgactaaactcaattctttcaaactcaa 14054936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 14076013 - 14076099
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||  | | |||||||||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||||||    
T  14076013 taagaatcacttttaagtatatgtttccaaacataaatcaatttacatcaaactcac-tttaaccaaaatcaattttctcaaactcaa 14076099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 19599583 - 19599497
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| |||||||||| |  ||||||||||||||||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  19599583 taagaatcaattttaagtaattgcatccaaacataaatcaatt-acattcaactcacttttattcaaaatcaattctctcaaactcaa 19599497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 30842130 - 30842216
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| ||  |||| ||||||||||||| ||||||||| || ||||||||||||| ||||||||||||||||||||||||    
T  30842130 taagaatcactttcaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaatcaaaatcaattctctcaaactcaa 30842216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 38263897 - 38263984
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| ||||||||||||| ||||||| ||||||||||| |||||||||| |||||| |||||| |||||| |||| ||||||||||||    
T  38263897 taagtatcacttttaagtgagtatattcaaacataaattaattcacatcaaactcaattttaagcaaaattaattttctcaaactcaa 38263984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 41866176 - 41866239
Alignment:
Q  26 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  41866176 atccaaacataaatcaattcacatccaactcacttttaactaaactcaattccctcaaactcaa 41866239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 26426201 - 26426116
Alignment:
Q  3 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||| ||||  ||||||||||||| |||||| | ||| ||||||||||||||||||||||||| ||||||||||||    
T  26426201 aagaatcacttttaattaagcgtatccaaacataa-tcaatttatatctaactcacttttaaccaaaatcaattttctcaaactcaa 26426116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 55638834 - 55638756
Alignment:
Q  11 cttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||| ||||| |||| ||||||||||||||| ||||  |||||||||||||| |||||||||||||||||||||||    
T  55638834 cttttaaataagtgtatctaaacataaatcaatttacatttaactcacttttaacaaaaatcaattctctcaaactcaa 55638756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 31520454 - 31520375
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 86  Q
    |||||||||||| |||| ||||| ||||||||||| ||||||| |||||||||||||||||||||| |||||| |||||||    
T  31520454 aatcacttttaa-taagcatatctaaacataaatccattcacacccaactcacttttaaccaaaattaattctttcaaact 31520375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 48908295 - 48908358
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48908295 tatccaaacataac-caattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaa 48908358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 9893709 - 9893796
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| ||||  || |||||||||||| ||||||||| ||| ||||||||||| || |||||||||||||||||| ||||    
T  9893709 taagaatcactttcaagtgggtgtatccaaacatatatcaattcatatctaactcacttttgacaaaaatcaattctctcaaattcaa 9893796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 28987029 - 28987103
Alignment:
Q  14 ttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||| ||| ||| ||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  28987029 ttaagtgagtgtattcaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 28987103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 56241923 - 56241844
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctc 81  Q
    |||||||||||||||  | | | |||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  56241923 taagaatcacttttacattaatgtatccaaacataaatcaattcatatcaaactcacttttaatcaaaatcaattctctc 56241844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 2175231 - 2175161
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    |||||||||||||  |||  ||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  2175231 aatcacttttaagcgagtgcatccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaatt 2175161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 54153061 - 54153129
Alignment:
Q  20 aagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| ||| ||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  54153061 aagtgtattcaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattcactcaaactcaa 54153129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 32238123 - 32238060
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||  |||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  32238123 tatccaaacataac-caattcacattcaactcacttttaaccaaaatcaattcactcaaactcaa 32238060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 48550218 - 48550302
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| |||||||| | |||  ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| ||| ||||    
T  48550218 gaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaa 48550302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 13183134 - 13183051
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||| |||||| ||||| ||||||||||||||||||||||| |  ||||  ||||||||||||||||||| ||||| ||||||    
T  13183134 aatcatttttaaataagtgtatccaaacataaatcaattcaccttaaacttgcttttaaccaaaatcaattatctcagactcaa 13183051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 54735738 - 54735652
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||  | | |||||||||||| ||||| ||||| ||||||  ||||||||||||||||| ||||||||||||    
T  54735738 taagaatcacttttaagtatatgtttccaaacataaaccaatttacatcaaactca-atttaaccaaaatcaattttctcaaactcaa 54735652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 14072519 - 14072587
Alignment:
Q  20 aagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| ||||||||||||| |||||| || | |||||||||||||| ||||||||||||||||||||||||    
T  14072519 aagtgtatccaaacataa-tcaatttaccttcaactcacttttaaacaaaatcaattctctcaaactcaa 14072587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 38306032 - 38306085
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  38306032 tatccaaacataaatcaattcgcattcaactcacttttaacaaaaatcaattct 38306085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 54488630 - 54488679
Alignment:
Q  29 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  54488630 caaacataaatcaattcacattcaactcacttttaacaaaaatcaattct 54488679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 54487285 - 54487221
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||| |||| |||||||||||| | | ||||||||||| ||||||||||    
T  54487285 tatccaaacataaatcaatttacattcaactcacttttgatcgaaatcaattctatcaaactcaa 54487221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 33843801 - 33843855
Alignment:
Q  23 tatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 77  Q
    ||||||||||||||||||| || |||||||||||||||||| ||| |||||||||    
T  33843801 tatatccaaacataaatcactttacatccaactcacttttagccagaatcaattc 33843855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 22699763 - 22699816
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||||||| || |||| ||||| ||||||||||||||||||||||    
T  22699763 tatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattct 22699816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 22980767 - 22980714
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||||||| || |||| ||||| ||||||||||||||||||||||    
T  22980767 tatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattct 22980714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 22994354 - 22994301
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||||||| || |||| ||||| ||||||||||||||||||||||    
T  22994354 tatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattct 22994301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 36150624 - 36150689
Alignment:
Q  24 atatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||| || |||| |||||||||||||| ||||||||||| | ||||| ||||    
T  36150624 atatccaaacataaatcactttacattcaactcacttttaatcaaaatcaattatatcaaaatcaa 36150689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 45780095 - 45780011
Alignment:
Q  4 agaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| | | |||| ||||| |||| |||||| | | ||||||||||| ||||||||||||| ||||||||||||    
T  45780095 agaatcacttttaagtgaatgtatctaaacaaaaattaattcataccaaactcactttttaccaaaatcaatt-tctcaaactcaa 45780011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 16492948 - 16493012
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||| |||||| | ||||| ||||    
T  16492948 tatccaaacataaataaattcacattcaactcacttttaatcaaactcaattatttcaaaatcaa 16493012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 53914920 - 53914983
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||| |||| |||||||||||||  ||||||| ||||||| ||||||||    
T  53914920 tatccaaacataaatcaatt-acattcaactcacttttagtcaaaatcgattctctgaaactcaa 53914983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 28947811 - 28947762
Alignment:
Q  28 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 77  Q
    |||||||||||||| || || | |||||||||||||||||||||||||||    
T  28947811 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattc 28947762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 39993574 - 39993627
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    |||| ||||||||||||||||||||  |||||| |||||| |||||||||||||    
T  39993574 tatctaaacataaatcaattcacatttaactcatttttaatcaaaatcaattct 39993627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 46958047 - 46958108
Alignment:
Q  28 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| | || || | |||||||||||||||||||||||||||| ||||| ||||    
T  46958047 ccaaacataaattactttacgttcaactcacttttaaccaaaatcaattctatcaaaatcaa 46958108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 53532001 - 53532062
Alignment:
Q  28 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||| ||  | |||||||||||||||||||| |||||||||| | ||||||||||    
T  53532001 ccaaacataaaccacgttacatccaactcacttttaactaaaatcaattatgtcaaactcaa 53532062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 523172 - 523235
Alignment:
Q  26 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||||||| ||  |||||||||||  |||||||||||| | |||| |||||    
T  523172 atccaaacataaatcaattcatattgaactcactttttcccaaaatcaattttgtcaagctcaa 523235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 38694046 - 38694133
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||  ||| ||||||||||||||  ||||  ||  ||||| |||||||  ||||||||||||| | ||||||||    
T  38694046 taagaatcacttttaagcgagtgtatccaaacataaactaatttgcactcaacttacttttagacaaaatcaattcttttaaactcaa 38694133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 38740367 - 38740316
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    ||||||||||||||||| ||||  | ||||||||||||| ||||||||||||    
T  38740367 tatccaaacataaatcacttcaacttcaactcacttttatccaaaatcaatt 38740316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 8683115 - 8683034
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattc--acatccaactcacttttaaccaaaatcaattctctcaaa 84  Q
    |||||||||||| || | | ||||||||||||||| |||||  ||||  |||||| ||||||||||| |||||| |||||||    
T  8683115 gaatcacttttatgttaatgtatccaaacataaattaattcttacattaaactcaattttaaccaaattcaattttctcaaa 8683034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 8754156 - 8754217
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaa 64  Q
    ||||||||| ||||| || | | |||||||||||||||||||| |||| ||||||||||||||    
T  8754156 taagaatcaattttaggtgattgtatccaaacataaatcaatt-acattcaactcacttttaa 8754217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 17898138 - 17898085
Alignment:
Q  8 tcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttt 61  Q
    |||||||||  ||| ||||||||||||||||||| || |||| |||||||||||    
T  17898138 tcacttttacctaaatatatccaaacataaatcactttacattcaactcacttt 17898085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 30887241 - 30887165
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctc 79  Q
    |||||||||||||||  |  || ||||||||||||||||||||  |||| ||||||| |||||| ||||| |||||||    
T  30887241 taagaatcacttttatattggtgtatccaaacataaatcaatt-tcatcaaactcacgtttaactaaaataaattctc 30887165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 5e-35; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 3097294 - 3097207
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  3097294 taagaatcacttttaagtgagtatatccaaacataaatcaattcatatcaaactcacttttaaccaaaatcaattctctcaaactcaa 3097207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 3467554 - 3467641
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| ||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3467554 taagaatcacttttaaataaatatatccaaacagaaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 3467641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 25698047 - 25697961
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25698047 taagaatcacttttaaataagtttatccaaacataa-tcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaa 25697961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 40742145 - 40742232
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| |||||   |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40742145 taagaatcaattttattaaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 40742232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 6399196 - 6399109
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||    
T  6399196 taagaatcacttttaagtgagtgtatcgaaacataaatcaattcacatcaaactcacttttaaccataatcaattctatcaaactcaa 6399109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 22936880 - 22936797
Alignment:
Q  3 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 86  Q
    ||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22936880 aagaatcacttctaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaact 22936797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 42143452 - 42143365
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||| |||||||||| ||||||||||||    
T  42143452 taagaatcacttttaaataagtttatccaaacataaatcaattcacctcaaactcacttttaactaaaatcaattttctcaaactcaa 42143365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 440277 - 440190
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| |||||| | | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  440277 taagaatcatttttaactgaatgtatccaaacataaatcaattcacatccaactcacatttaaccaaaatcaattctctcagactcaa 440190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 4941869 - 4941782
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||| ||||||| ||| | ||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||    
T  4941869 taagaatcgcttttaaataattttatccaaacataaatcaattcacctcaaactcacttttaatcaaaatcaattctctcaaactcaa 4941782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 25497717 - 25497799
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  25497717 aatcacttttaaataagtgtatccaaacataa-tcaattcacatccaactcacttttaaccaaaatcaattctcctaaactcaa 25497799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 26243145 - 26243232
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||  || |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||| ||||||||    
T  26243145 taagaatcacttttaaacaattatatccaaacataaatcaattcatatcaaactcacttttaacaaaaatcaattctcttaaactcaa 26243232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 44926862 - 44926948
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||  |||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  44926862 taagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 44926948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 43550913 - 43550991
Alignment:
Q  3 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctc 81  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  43550913 aagaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattttctc 43550991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 8124992 - 8125076
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactc 87  Q
    |||||||||||||||| | ||| ||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  8124992 taagaatcacttttaaatgagtgtatccaaacataa-tcaattcacatcaaactcacttctaaccaaaatcaattctctcaaactc 8125076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 30759363 - 30759306
Alignment:
Q  32 acataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30759363 acataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 30759306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 28425560 - 28425484
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    |||||||||||| |||| |||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  28425560 taagaatcacttgtaagaaagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattct 28425484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 15206717 - 15206804
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| ||||| | | ||||||||||||||||||||||||| ||||||||||||| |||||||||||| | ||||||||||    
T  15206717 taagaatcacttctaagtcaatgtatccaaacataaatcaattcacattcaactcacttttacccaaaatcaattttgtcaaactcaa 15206804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 41289146 - 41289059
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||   |||| ||||||||||||||||||||||||  ||||||||||||||  |||||||||||||||||||||||    
T  41289146 taagaatcacttttagtaaagtgtatccaaacataaatcaattcacaatcaactcacttttaattaaaatcaattctctcaaactcaa 41289059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 42149029 - 42149100
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  42149029 gaatcacttttaaataagtctatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaatt 42149100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 38114489 - 38114552
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38114489 tatccaaacataa-tcaattcacatccaacttacttttaaccaaaatcaattctctcaaactcaa 38114552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 38152262 - 38152179
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 86  Q
    ||||||||| |||||||||| ||| |||||||||||||||||| ||||| ||||||| |||||| |||||||||| |||||||||    
T  38152262 taagaatcatttttaagtaaatatttccaaacataaatcaatttacatcaaactcac-tttaactaaaatcaattttctcaaact 38152179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 24897675 - 24897589
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| |||||| ||| | ||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||  ||||||||    
T  24897675 taagaatcaattttaaataaatgtatccaaacataattca-ttcatatccaactcacttttaaccaaaatcaattctcataaactcaa 24897589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 27649767 - 27649853
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| | ||| |||| |||||||  |||||||| |||||| |||||||||||||||||||||||| ||||||||||    
T  27649767 taagaatcacttttaaatgagtgtatctaaacatat-tcaattcatatccaaatcacttttaaccaaaatcaattctttcaaactcaa 27649853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 33627122 - 33627035
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||   |||| |||||||||||||||||||||  |||||||||| ||||||  |||||||||||| ||||||||||    
T  33627122 taagaatcacttttagtaaagtgtatccaaacataaatcaattcttatccaactcagttttaaataaaatcaattctttcaaactcaa 33627035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 31246380 - 31246327
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  31246380 tatccaaacataaatcaattcacattcaactcacttttaacaaaaatcaattct 31246327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 40742360 - 40742296
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||||| ||| |||||||||||||| |||||||||||| | ||||||||    
T  40742360 tatccaaacataaatcaattcagatcaaactcacttttaacgaaaatcaattcttttaaactcaa 40742296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 36121614 - 36121546
Alignment:
Q  20 aagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| ||||||||||||| || |||||||| ||||||||||||||||||||||||||| || ||||||||    
T  36121614 aagtgtatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaattcacttaaactcaa 36121546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 19649230 - 19649281
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||||||||    
T  19649230 tatccaaacataaatcactttacattcaactcacttttaaccaaaatcaatt 19649281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 36114128 - 36114042
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||   ||| |||||||||||||  ||||  ||||| |||| |||||||| ||||||||||||||||||||||||    
T  36114128 taagaatcacttttaaacgagtgtatccaaacataac-caatctacatcaaacttacttttaatcaaaatcaattctctcaaactcaa 36114042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 10552969 - 10552923
Alignment:
Q  30 aaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  10552969 aaacataaatcaatttacattcaactcacttttaaccaaaatcaatt 10552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 26490977 - 26491030
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||||||||    
T  26490977 tatccaaacacaaatcaatttacactcaactcacttttaaccaaaatcaattct 26491030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 34342941 - 34342873
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaat 71  Q
    |||||||||||||||| ||| | |||||||||| ||||||||||| || | |||||||||||||||||||    
T  34342941 taagaatcacttttaaataaatttatccaaacaaaaatcaattcatat-ctactcacttttaaccaaaat 34342873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 32767481 - 32767538
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 84  Q
    |||||||||||||||||||| ||||||||||||||||||  || ||||||||| ||||||    
T  32767481 tatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaa 32767538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 39219764 - 39219824
Alignment:
Q  24 atatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 84  Q
    |||||||||||||||||| |||| ||  |||||||||||||| |||||||||||| |||||    
T  39219764 atatccaaacataaatcacttcatattaaactcacttttaacgaaaatcaattctatcaaa 39219824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 1373064 - 1373134
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    ||||||||||  |||| | ||||||||||||||||| ||||  | ||||||||||||| ||||||||||||    
T  1373064 aatcacttttttgtaattgtatccaaacataaatcacttcaacttcaactcacttttatccaaaatcaatt 1373134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 36779434 - 36779488
Alignment:
Q  24 atatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    |||||||||||||||| | || |||| |||||||||||||| |||||||||||||    
T  36779434 atatccaaacataaattactttacattcaactcacttttaatcaaaatcaattct 36779488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 42600968 - 42601018
Alignment:
Q  28 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||| |||||||||||||||| ||||||||||| ||| ||||||||||||    
T  42600968 ccaaaaataaatcaattcacattcaactcactttgaacaaaaatcaattct 42601018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 30081715 - 30081652
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||||||||| |  |||||||||||||| |||||||||| || |||| ||||    
T  30081715 tatccaaacataaatcaattcac-tttaactcacttttaactaaaatcaattttcacaaaatcaa 30081652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 35615733 - 35615817
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||| |||||||| | | |||| |||||||||||||||| ||| |||||||||| |  |||||||||||  | ||||||||||    
T  35615733 gaatcaattttaagtgaatgtatctaaacataaatcaattcccattcaactcacttctttccaaaatcaatcttgtcaaactcaa 35615817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 37667126 - 37667059
Alignment:
Q  21 agtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| ||||||||||||||||  |||| | ||||||| |||||||||||| ||||| ||||    
T  37667126 agtatatccaaatataaatcaattcacattaaactta-ttttaacgaaaatcaattctatcaaaatcaa 37667059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 40792292 - 40792205
Alignment:
Q  1 gtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| |||||||| || |||| ||||| |||| |||||||||||  ||| |||||||||||||| ||||||||||| | ||||| ||||    
T  40792292 gtaaaaatcacttctatgtaaatatattcaaatataaatcaattg-cattcaactcacttttaatcaaaatcaattatatcaaaatcaa 40792205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 37458386 - 37458312
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 77  Q
    ||||||||||||||| || | |||||||||||||||||||||| |  | |||| || |||| ||||||||||||||    
T  37458386 taagaatcacttttatgtcaatatatccaaacataaatcaatttagcttcaacaca-tttttaccaaaatcaattc 37458312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 2071630 - 2071569
Alignment:
Q  27 tccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| |||||||| |||| |||||||||||||  ||||||||||||| ||||| ||||    
T  2071630 tccaaacatgaatcaatt-acattcaactcacttttagtcaaaatcaattctgtcaaaatcaa 2071569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 89
Target Start/End: Complemental strand, 30085674 - 30085640
Alignment:
Q  55 tcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||||||||| ||||||||    
T  30085674 tcacttttaaccaaaatcaattctcttaaactcaa 30085640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 3465478 - 3465441
Alignment:
Q  52 aactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  3465478 aactcacttctaaccaaaatcaattcactcaaactcaa 3465441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 27746292 - 27746231
Alignment:
Q  23 tatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 84  Q
    ||||||||||||||||||| ||||  ||||||| | ||| |||||||||||| ||| |||||    
T  27746292 tatatccaaacataaatcagttcaagtccaacttattttgaaccaaaatcaagtctatcaaa 27746231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 33588764 - 33588817
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||||| | || ||||  ||||||||||||| |||||||||||||    
T  33588764 tatccaaacataaataattttacattaaactcacttttaatcaaaatcaattct 33588817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 23018140 - 23018204
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||| |||| | |  |||||||||||| | ||||||||||||  ||||||||||    
T  23018140 tatccaaacataaataaatttatactcaactcacttttgatcaaaatcaattcgatcaaactcaa 23018204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 38516343 - 38516395
Alignment:
Q  26 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    |||||||||||||||| || |||| ||||||||| ||| | ||||||||||||    
T  38516343 atccaaacataaatcactttacattcaactcactattatcgaaaatcaattct 38516395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 9988584 - 9988500
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9988584 gaatcacttttaaataagtgtatccaaacataaatcaattcacatccaactcacttttaacaaaaatcaattctctcaaactcaa 9988500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 1945122 - 1945038
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1945122 gaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 1945038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 2213669 - 2213756
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| ||||| |||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2213669 taagaatcacttttaaataagtgtatccaaagacaaatcaattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaa 2213756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 7472759 - 7472673
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| ||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7472759 taagaatcacttttaaataagtgtatccaaacataa-tcaattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaa 7472673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 31224702 - 31224789
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||   || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  31224702 taagaatcacttttagtaaaatatatccaaacataaatcaattcacatccaactcacttttaactaaaatcaattctttcaaactcaa 31224789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 2213532 - 2213615
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  2213532 aatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaa 2213615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 7296181 - 7296264
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||  | ||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  7296181 aatcacttttatatgagtgtatccaaacataaatcaattcacatcaaactcatttttaaccaaaatcaattctctcaaactcaa 7296264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 26208016 - 26207933
Alignment:
Q  1 gtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 84  Q
    |||||||||| |||||| ||||| |||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  26208016 gtaagaatcaattttaattaagtgtatcaaaacataaatcaattcacatccaactgacttttaaccaaaaccaattctctcaaa 26207933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 27911432 - 27911515
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| ||||    
T  27911432 aatcacttttaaatgagtatatccaaacataaatcaattcacatcaaactcacttttaaccaaactcaattctatcaaaatcaa 27911515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 28261316 - 28261403
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| || || ||  |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28261316 taagaatcacttctatgtgagagtatccaaatataaatcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaa 28261403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 28127369 - 28127289
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 86  Q
    |||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||    
T  28127369 aatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaact 28127289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 5916324 - 5916246
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 84  Q
    |||||||||||||  |||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  5916324 gaatcacttttaataaagtgtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctctcaaa 5916246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 36312302 - 36312380
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 84  Q
    |||||||||||||  |||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  36312302 gaatcacttttaataaagtgtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctctcaaa 36312380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 39141555 - 39141469
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| |||||| | ||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  39141555 taagaatcatttttaaatgagtgtatccaaacataa-tcaattcatatccaactcacttttaaccaaaatcaattctttcaaactcaa 39141469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 44619143 - 44619060
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||| ||||||  |||| ||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||    
T  44619143 aatcatttttaaacaagtgtatccaaacataaatcaattcccctcaaactcacttttaaccaaaatcaattctctcaaactcaa 44619060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 2215292 - 2215361
Alignment:
Q  20 aagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||    
T  2215292 aagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctctcaagctcaa 2215361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 30007613 - 30007552
Alignment:
Q  28 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  30007613 ccaaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaa 30007552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 36548231 - 36548308
Alignment:
Q  12 ttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||| ||  ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  36548231 ttttaagtgagagtatccaaacataaatcaattcacatcagactcacttttaatcaaaatcaattctctcaaactcaa 36548308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 34433369 - 34433305
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  34433369 tatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctgtcaaactcaa 34433305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 41580773 - 41580709
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  41580773 tatccaaacataaattaatttacatcaaactcacttttaaccaaaatcaattctctcaaactcaa 41580709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 45714731 - 45714667
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  45714731 tatccaaacataaatcaattcacatcgaactcatttttaatcaaaatcaattctctcaaactcaa 45714667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 25747967 - 25747881
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| ||||| || | | |||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  25747967 taagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcacttttaatcaaaatcaattctctcaaactcaa 25747881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 38600511 - 38600445
Alignment:
Q  20 aagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 86  Q
    |||| ||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  38600511 aagtgtattcaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattctctcaaact 38600445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 42516060 - 42515975
Alignment:
Q  3 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||| |||| | | ||||||| ||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  42516060 aagaatcattttttaatgagtatattcaaacataa-tcaattcacatcaaactcacttttaactaaaatcaattctctcaaactcaa 42515975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 42089618 - 42089536
Alignment:
Q  2 taagaatcacttttaagtaagtatatc----caaacataaatcaattcacatccaactcacttttaaccaaaatcaattctct 80  Q
    |||||||||||||||| ||||| ||||    ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  42089618 taagaatcacttttaaataagtgtatctatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctct 42089536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 16467108 - 16467182
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    |||||||||||||||  | |  ||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  16467108 taagaatcacttttacattatcatatccaaacataaatcaatttacatctaactcacttttaaccaaaatcaatt 16467182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 28641690 - 28641744
Alignment:
Q  28 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctca 82  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28641690 ccaaatataaatcaattcacatccaactcacatttaaccaaaatcaattctctca 28641744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 3853945 - 3854009
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||| |||| |||||||||||||| ||||||||||||| ||||| ||||    
T  3853945 tatccaaacataaatcaatttacattcaactcacttttaatcaaaatcaattctatcaaaatcaa 3854009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 7295411 - 7295347
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||| || || |||||| ||||||||| |||||||||||||||||||||    
T  7295411 tatccaaacataaatcaatttacgtcaaactcatttttaaccagaatcaattctctcaaactcaa 7295347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 8170358 - 8170421
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  8170358 tatccaaacataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaa 8170421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 32502031 - 32502094
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  32502031 tatccaaacataa-tcaattcacctaaaactcacttttaaccaaaatcaattctctcaaactcaa 32502094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 14821185 - 14821271
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| ||   |||| ||||||||||||| |||||||||||  |||||||||||||| ||||||||||| |||||||||||    
T  14821185 taagaatcacttctagtaaagtgtatccaaacataa-tcaattcacattaaactcacttttaactaaaatcaattcactcaaactcaa 14821271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 23358284 - 23358367
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||  |||| ||||||||||||||  | ||||  || ||||||||||||| ||||||||||||||||||||||||    
T  23358284 aatcacttttaaacaagtgtatccaaacataaactatttcatctcaaactcacttttaatcaaaatcaattctctcaaactcaa 23358367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 31562747 - 31562686
Alignment:
Q  27 tccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||| ||||||||| || || |||||||||||||||||||||||||||||||||||    
T  31562747 tccaaacataa-tcaattcacctcaaattcacttttaaccaaaatcaattctctcaaactcaa 31562686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 8041311 - 8041387
Alignment:
Q  12 ttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||| |  ||||||||||||||||||| |||| ||| |||||||||  ||||||||||||||||||||||||    
T  8041311 ttttaagtaattgcatccaaacataaatcaatt-acattcaattcacttttattcaaaatcaattctctcaaactcaa 8041387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 23359993 - 23359940
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  23359993 tatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct 23359940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 30599967 - 30599908
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 84  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||||||||||| |||||    
T  30599967 tatccaaacacaaatcaattgacactcaactcacttttaaccaaaatcaattctatcaaa 30599908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 34997301 - 34997238
Alignment:
Q  23 tatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 86  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||| | |||||||    
T  34997301 tatattcaaacataaatcaattcacatccaattcatttttaacaaaaatcaattttgtcaaact 34997238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 39106753 - 39106678
Alignment:
Q  4 agaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctc 79  Q
    |||||||||||||||| | | ||||||||||| || ||||| | ||| ||||||||||| ||||||||||||||||    
T  39106753 agaatcacttttaagtgaatgtatccaaacattaaacaatttatatcaaactcactttttaccaaaatcaattctc 39106678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 18511147 - 18511211
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||| ||||  || |||||||||||||||||||||| | ||||| ||||    
T  18511147 tatccaaacataaatcaattaacatttaaatcacttttaaccaaaatcaattatatcaaaatcaa 18511211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 10918649 - 10918700
Alignment:
Q  26 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 77  Q
    |||||||||||||||| || |||| ||||||||||||| |||||||||||||    
T  10918649 atccaaacataaatcactttacattcaactcacttttatccaaaatcaattc 10918700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 12110919 - 12110970
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    ||||||||||||||||| || | || ||||||||||||||||||||||||||    
T  12110919 tatccaaacataaatcactttatattcaactcacttttaaccaaaatcaatt 12110970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 23377549 - 23377600
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    |||||||||||||||||| | |||| ||||||||||||||||||||| ||||    
T  23377549 tatccaaacataaatcaacttacattcaactcacttttaaccaaaattaatt 23377600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 43436364 - 43436290
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctc 79  Q
    |||| |||||||| | |||  ||| ||||||||||||||| ||||| || |||||||||| ||||||||||||||    
T  43436364 gaattacttttaaatgagtgcatcaaaacataaatcaatttacatctaattcacttttaatcaaaatcaattctc 43436290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 3654865 - 3654794
Alignment:
Q  6 aatcacttttaagtaagtatatccaaa-cataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    ||||||||||| |||| | |||||||| ||||| ||| | ||||| ||||||||||||||| ||||||||||    
T  3654865 aatcacttttatgtaactctatccaaaacataagtcactgcacattcaactcacttttaactaaaatcaatt 3654794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 23267400 - 23267363
Alignment:
Q  52 aactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  23267400 aactcacttctaaccaaaatcaattcactcaaactcaa 23267363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 26806318 - 26806265
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||||||| ||  ||  |||||||||||||| |||||||||||||    
T  26806318 tatccaaacataaatcacttttcactcaactcacttttaatcaaaatcaattct 26806265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 11240693 - 11240753
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcactttt 62  Q
    ||||||||| || ||||| | | ||| ||||||||||||||||||||| |||||| |||||    
T  11240693 taagaatcaattctaagtgaatgtattcaaacataaatcaattcacattcaactcgctttt 11240753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 25940300 - 25940264
Alignment:
Q  29 caaacataaatcaattcacatccaactcacttttaac 65  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  25940300 caaatataaatcaattcacatcaaactcacttttaac 25940264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 42770460 - 42770408
Alignment:
Q  24 atatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    ||||||||||||| |||||||  ||| |||||||||||||| |||||| ||||    
T  42770460 atatccaaacatagatcaattttcattcaactcacttttaatcaaaatgaatt 42770408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 1e-32; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 10826104 - 10826191
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| |||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  10826104 taagaatcacttttaaataagtatatccaaacaaaaatcaattcaaattcaactcacttttaaccaaaatcaattctctcaaactcaa 10826191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 16442435 - 16442351
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||| ||||    
T  16442435 gaatcacttttaaataagtgtatccaaacataaatcaattcacattcaactcacttgtaactaaaatcaattctctcaaaatcaa 16442351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 13739219 - 13739305
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||  |||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  13739219 taagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 13739305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 13744719 - 13744805
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||  |||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  13744719 taagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 13744805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 33899093 - 33899006
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||  | ||| |||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  33899093 taagaatcacttttacattagtgtatccaaacataaatcaattcatatcaaactcacttttaatcaaaatcaattctctcaaactcaa 33899006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 16548155 - 16548229
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctc 79  Q
    |||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16548155 gaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctc 16548229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 17830058 - 17829999
Alignment:
Q  30 aaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17830058 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 17829999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 29409339 - 29409252
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| ||||||  || | |||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  29409339 taagaatcatttttaaaaaactgtatccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaattctttcaaactcaa 29409252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 6208150 - 6208064
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||   |||| ||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||| ||||    
T  6208150 taagaatcacttttagtaaagtgtatccaaacataa-tcaattcacattcaactcacttttaatcaaaatcaattcactcaaaatcaa 6208064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 21254966 - 21254880
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| ||||| || | | |||||||||||||||||||| |||| |||||||||||||| |||| |||||||||||||||||||    
T  21254966 taagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcacttttaatcaaattcaattctctcaaactcaa 21254880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 1312527 - 1312442
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactc 87  Q
    ||||||||| || ||||| | | ||||| ||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||||    
T  1312527 taagaatcaattctaagtcaatgtatccgaacataaatcaattcgcattcaactcacttttaaccaaaatcaattttatcaaactc 1312442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 699594 - 699656
Alignment:
Q  26 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||||||  ||||||||||| |||||| |||||||||||| ||||||||||    
T  699594 atccaaacataaatcaattcttatccaactcac-tttaactaaaatcaattctttcaaactcaa 699656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 31132477 - 31132563
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| ||||| |||||||| ||||   |||| |||||||||||| ||||| ||||||| |||| ||||||||||||    
T  31132477 taagaatcacttttaaataagtgtatccaaaaataacg-aattaacatccaactcatttttagccaaaataaattatctcaaactcaa 31132563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5584137 - 5584050
Alignment:
Q  1 gtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| |||||||| ||  ||| |||||||||||||||||||||| ||||  ||||||||||||  ||||||||||||| ||||| ||||    
T  5584137 gtaaaaatcacttctatataaatatatccaaacataaatcaatt-acattaaactcacttttagtcaaaatcaattctgtcaaaatcaa 5584050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 29682203 - 29682262
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 84  Q
    |||||||||| ||||||||| |||  ||||||| |||||||||||||||||||| |||||    
T  29682203 tatccaaacacaaatcaatttacacgcaactcaattttaaccaaaatcaattctatcaaa 29682262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 882778 - 882843
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaaa 90  Q
    ||||||||||||||||| || || | ||||||| ||||||| | ||||||||| ||||||||||||    
T  882778 tatccaaacataaatcattttaccttcaactcaattttaactagaatcaattcactcaaactcaaa 882843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 21455897 - 21455980
Alignment:
Q  4 agaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||| ||||| ||| |||||| || | | ||||||||||||| ||||||||| ||||||||||||  |||||||||    
T  21455897 agaatcacttttaa-taagtgtatacaaacacaattga-ttcacatccaacttacttttaactaaaatcaattcttacaaactcaa 21455980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 10874290 - 10874222
Alignment:
Q  8 tcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    |||||||||  ||| |||||||||||||||| || ||||||| |||||||| |||| | ||||||||||    
T  10874290 tcacttttacctaaatatatccaaacataaaccacttcacattcaactcacatttacctaaaatcaatt 10874222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 15151543 - 15151506
Alignment:
Q  52 aactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  15151543 aactcacttctaaccaaaatcaattcactcaaactcaa 15151506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 1499975 - 1500043
Alignment:
Q  8 tcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    |||||||||  ||| | ||| |||||||||||||||| |||  |||||| |||||| ||||||||||||    
T  1499975 tcacttttacataaatgtattcaaacataaatcaatttacactcaactcgcttttagccaaaatcaatt 1500043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 16122062 - 16122002
Alignment:
Q  29 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||| ||||||| | |||  ||| |||||||||||||||||||||||| ||||| ||||    
T  16122062 caaacacaaatcaacttacactcaaatcacttttaaccaaaatcaattctatcaaaatcaa 16122002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 39988052 - 39987965
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  39988052 taagaatcacttttaaataagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 39987965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 8049136 - 8049049
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| ||||| |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||    
T  8049136 taagaatcacttttaaataagtgtatccaaacataaatcaattaacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 8049049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 22482219 - 22482303
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  22482219 gaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaa 22482303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 32030741 - 32030828
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||| | |||||||||| ||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  32030741 taagaatcacttttgaataagtatatcaaaacaaaaatcaattcacatctaacttacttttaaccaaaatcaattctctcaaactcaa 32030828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41834918 - 41835003
Alignment:
Q  1 gtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 86  Q
    ||||||||||||| ||   |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41834918 gtaagaatcacttctagtaaagtgtatccaaacataaatcaattcacttccaactcacttttaaccaaaatcaattctctcaaact 41835003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 3667885 - 3667968
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  3667885 aatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttaacaaaatcaattctctcaaactcaa 3667968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 27021156 - 27021242
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||  |||||| |||||||||||||||||| ||||||||||||    
T  27021156 taagaatcacttttaagtgagtata-ccaaacataaatcaattcacatttaactcatttttaaccaaaatcaattttctcaaactcaa 27021242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 32454564 - 32454650
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||  |||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  32454564 taagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 32454650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 40885244 - 40885325
Alignment:
Q  8 tcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||  |||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  40885244 tcacttttaaacaagtgtgtccaaacataaatcaattcacatccaactcacttttaatcaaaatcaattctcttaaactcaa 40885325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 10058100 - 10058188
Alignment:
Q  1 gtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| ||   |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  10058100 gtaagaatcacttctagtaaagtgtatccaaacataaatcaattcatttccaactcacttttaaccaaaatcaatactctcaaactcaa 10058188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 4292177 - 4292260
Alignment:
Q  3 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 86  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||||||| ||||| | |||||| |||||||||||||||||||||    
T  4292177 aagaatcacttctaattaagtgtatccaaacataaatcaattcacattcaacttatttttaatcaaaatcaattctctcaaact 4292260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 9275569 - 9275482
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| |||||   |||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||    
T  9275569 taagaatcaattttattaaagtgtatccaaacataaatcaattaacatctaactcacttttaaccaaaatcaattctcttaaactcaa 9275482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 13253167 - 13253081
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| | ||| ||||||||||||| |||||||| || |||||||||||||||||||||||||||| ||||||||||    
T  13253167 taagaatcacttttaaatgagtgtatccaaacataa-tcaattcatattcaactcacttttaaccaaaatcaattctttcaaactcaa 13253081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 35760220 - 35760303
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||| |||||| | ||| ||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  35760220 aatcagttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaa 35760303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 40495439 - 40495356
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||  |||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| | ||||||||||    
T  40495439 aatcacttttaaaaaagtgtatccaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattatatcaaactcaa 40495356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 40791153 - 40791068
Alignment:
Q  3 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||| ||||  ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||    
T  40791153 aagaatcacttttaattaagcgtatccaaacataa-tcaattcatatctaactcacttttaaccaaaatcaattttctcaaactcaa 40791068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 42146336 - 42146421
Alignment:
Q  3 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||| ||||  ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||    
T  42146336 aagaatcacttttaattaagcgtatccaaacataa-tcaattcatatctaactcacttttaaccaaaatcaattttctcaaactcaa 42146421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 3060308 - 3060225
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 86  Q
    ||||||||||||| |||| ||||||||||||||||||| |||||| ||  ||||||||||||| |||||||||||||||||||||    
T  3060308 taagaatcacttt-aagtgagtatatccaaacataaattaattcatataaaactcacttttaatcaaaatcaattctctcaaact 3060225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 7386017 - 7385933
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 86  Q
    |||||||||||||||| ||||| |||  |||||||||||||||||| || ||| ||||||||||||||||||||||||| |||||    
T  7386017 taagaatcacttttaaataagtgtatttaaacataaatcaattcacctcaaacccacttttaaccaaaatcaattctctaaaact 7385933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 16158550 - 16158462
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaaa 90  Q
    ||||||||||||||||  ||||  ||||||| |||||| |||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  16158550 taagaatcacttttaaaaaagtgcatccaaatataaattaattcacatcaaactcacttttaatcaaaatcaattctttcaaactcaaa 16158462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 7714967 - 7715054
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| ||| |||| ||| | || ||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  7714967 taagaatcaatttcaagtgagtgtgtcaaaacatatatcaattcatatctaactcacttttaaccaaaatcaattctctcaaactcaa 7715054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 24045881 - 24045944
Alignment:
Q  26 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  24045881 atccaaacataaatcaattcacatcagactcacttttaaccaaaatcaattctctcaaattcaa 24045944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 2430381 - 2430295
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| ||   |||| ||||||||||||| ||||||||  | |||||||||||||||||||||||||||||||||||||||    
T  2430381 taagaatcacttctattgaagtgtatccaaacataa-tcaattcatgttcaactcacttttaaccaaaatcaattctctcaaactcaa 2430295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 5710448 - 5710386
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactc 87  Q
    |||||||||||||| ||||||||| | ||||||||||||||||||||||||||| ||||||||    
T  5710448 tatccaaacataaagcaattcacaccaaactcacttttaaccaaaatcaattctttcaaactc 5710386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 2483776 - 2483724
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 77  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  2483776 tatccaaacataaatcaattcacattcaactcacttttaactaaaatcaattc 2483724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 7178805 - 7178891
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| ||||| || | | |||||||||||||||||||| |||| |||||||||||||  |||||| |||||||||||||||||    
T  7178805 taagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcacttttagtcaaaattaattctctcaaactcaa 7178891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 23914339 - 23914252
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| |  || ||||||||| |||||||||||| |||||||||| ||||||  | |||||||||||||||| ||||    
T  23914339 taagaatcacttttaaatgggtgtatccaaacgtaaatcaattcatatccaactcaattttaagtataatcaattctctcaaaatcaa 23914252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 28869588 - 28869530
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcactt 60  Q
    |||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||    
T  28869588 taagaatcacttttaagtaagtgtattcaaacataaatcaatccacatccaactaactt 28869530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 22811076 - 22811129
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  22811076 tatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct 22811129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 34107004 - 34106945
Alignment:
Q  30 aaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||||||| | ||||||||    
T  34107004 aaacattaatcaattcacatctaactcacttttaaccaaaaacaattcttttaaactcaa 34106945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 41740674 - 41740591
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||  |||| ||| |||||||||| |||||||  || ||||||| | ||| ||||||||||||||||||||||||    
T  41740674 aatcacttttaaacaagtgtattcaaacataaaccaattcatctcaaactcacctataatcaaaatcaattctctcaaactcaa 41740591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 33953968 - 33953900
Alignment:
Q  20 aagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| ||||||||||||| |||||| || | ||||||||||||||  |||||||||||||||||||||||    
T  33953968 aagtgtatccaaacataa-tcaatttacgttcaactcacttttaaataaaatcaattctctcaaactcaa 33953900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 19784864 - 19784915
Alignment:
Q  26 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 77  Q
    ||||||||||||| || || |||| |||||||||||||||||||||||||||    
T  19784864 atccaaacataaaccactttacattcaactcacttttaaccaaaatcaattc 19784915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 20068942 - 20069028
Alignment:
Q  3 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||   | ||| ||||||||||||||| |||| | |  |||||||||||| ||||||||||||||  ||||||||||    
T  20068942 aagaatcacttttgcattagtgtatccaaacataaataaatttaaactcaactcacttttgaccaaaatcaattcgatcaaactcaa 20069028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 24036622 - 24036687
Alignment:
Q  24 atatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| ||||||||||||| || |||| |||||||||||| | ||||||||||||| ||||| ||||    
T  24036622 atattcaaacataaatcattttacattcaactcacttttcatcaaaatcaattctatcaaaatcaa 24036687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 2868414 - 2868362
Alignment:
Q  26 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    |||||||| ||||||| || |||| ||||||||||||||| ||||||||||||    
T  2868414 atccaaacttaaatcactttacattcaactcacttttaactaaaatcaattct 2868362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 33468054 - 33467990
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||| ||||||||  |||  ||||||||||||||||||||||| |||| ||||| ||||    
T  33468054 tatccaaacacaaatcaatatacactcaactcacttttaaccaaaatcagttctatcaaaatcaa 33467990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 2861668 - 2861754
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||  ||  |||||||||||||||||||||| |||| ||| ||| |||||||  ||||||||| | ||||| ||||    
T  2861668 taagaatcacttttacatat-tatatccaaacataaatcaatttacatgcaagtcatttttaactcaaatcaattatatcaaaatcaa 2861754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 4569130 - 4569089
Alignment:
Q  37 aatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||  |||||||||||||| |||||||||||||    
T  4569130 aatcaattcacactcaactcacttttaatcaaaatcaattct 4569089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 5970005 - 5969956
Alignment:
Q  29 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||| || |||| |||||||||| || ||||||||||||||    
T  5970005 caaacataaatcactttacattcaactcacttatatccaaaatcaattct 5969956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 35847925 - 35847888
Alignment:
Q  52 aactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  35847925 aactcacttctaaccaaaatcaattcactcaaactcaa 35847888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 16843599 - 16843643
Alignment:
Q  45 cacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| |||||||||||||||||| ||||  ||||||||||    
T  16843599 cacatccaattcacttttaaccaaaatctattcgttcaaactcaa 16843643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 42850308 - 42850221
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  42850308 taagaatcacttttaaggaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattcacttaaactcaa 42850221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 48510945 - 48511032
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  48510945 taagaatcacttttaagcaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattatctcaaactcaa 48511032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 31223411 - 31223498
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| ||   |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31223411 taagaatcacttctattaaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 31223498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 43728966 - 43728880
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43728966 taagaatcacttttaaataagtttatccaaacataa-tcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaa 43728880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 20800363 - 20800279
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  20800363 gaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaa 20800279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 35569288 - 35569204
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  35569288 gaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaa 35569204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 47123423 - 47123510
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||  |||| |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  47123423 taagaatcacttttaacgaagtgtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaa 47123510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 1199865 - 1199951
Alignment:
Q  3 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  1199865 aagaatcacttctaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaa 1199951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 15884287 - 15884351
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15884287 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctgtcaaactcaa 15884351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 4369891 - 4369805
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||| ||  || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  4369891 taagaatcacttttaagtgagggtacccaaacataaatcaattcacatc-aactcacttttaaccaaaatcaattctctcaaaatcaa 4369805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 7826443 - 7826356
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||| ||  || ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  7826443 taagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaagctcacttttaaccaaaatcaattctctcaaaatcaa 7826356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 49243044 - 49242984
Alignment:
Q  29 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  49243044 caaacataaatcaattcacatccaactcatttttaaccaaaatcaattctctcaaactcaa 49242984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 5410677 - 5410763
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||| ||||    
T  5410677 taagaatcacttttaagta-gtgtattcaaacataaatcaatttacatccaactcacttttaatcaaaatcaattctttcaaattcaa 5410763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 11561859 - 11561946
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||   ||||||| |||| |||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||    
T  11561859 taagaatcacttttaaaatagtatattcaaatataaatcaattcacattcaactcacttttaaccaaaattaattctttcaaactcaa 11561946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 36205227 - 36205315
Alignment:
Q  1 gtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||| ||||| ||||||| || ||| ||||||| ||| ||| ||||||||| ||||||||||||||||||||||||    
T  36205227 gtaagaatcacttttaaataagtttatccaatcaaaaaccaattcatatctaacccacttttaatcaaaatcaattctctcaaactcaa 36205315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 6166147 - 6166233
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| | ||| ||||||||||||| |||||||| ||| ||||||||| ||||||||||||||||||||||| ||||    
T  6166147 taagaatcacttttaaatgagtgtatccaaacataa-tcaattcagatcaaactcacttctaaccaaaatcaattctctcaaattcaa 6166233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 12468253 - 12468336
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||  |||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||| | ||||||||||    
T  12468253 aatcacttttaaaaaagtgtatccaaatataaatcaatttacatcaaactcacttttaaccaaaatcaattatatcaaactcaa 12468336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 25230044 - 25230129
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactca 88  Q
    |||||||||||| ||   |||| ||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  25230044 taagaatcacttctattaaagtgtatccaaacataa-tcaattcacattcaactcacttttaactaaaatcaattctctcaaactca 25230129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 40229558 - 40229484
Alignment:
Q  3 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 77  Q
    ||||||||| | |||| |||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  40229558 aagaatcacctgtaagaaagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattc 40229484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 13056039 - 13056119
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactc 87  Q
    |||||||||||| ||||  ||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  13056039 aatcacttttaa-taagcgtattcaaacataaatcaattcacactcaactcacttttaaccaaaatcaattctttcaaactc 13056119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 12247461 - 12247543
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||  |||| ||||||||||||| | |||| |||||||||||||||||||||| |||||||||||| ||||||||    
T  12247461 aatcacttttaaacaagtgtatccaaacataatt-aatttacatccaactcacttttaaccagaatcaattctcttaaactcaa 12247543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 50406167 - 50406254
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| ||||||  ||||  ||||||||| ||||||||||||||| ||||||||||||| ||||||||| ||| ||||||||||    
T  50406167 taagaatcatttttaacgaagtgcatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaaatctttcaaactcaa 50406254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 50977406 - 50977344
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactc 87  Q
    |||||||||||||| ||||||||| | ||||||||||||||||||||||||||| ||||||||    
T  50977406 tatccaaacataaaacaattcacaccaaactcacttttaaccaaaatcaattctttcaaactc 50977344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 10470650 - 10470713
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  10470650 tatccaaacataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaa 10470713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 11023395 - 11023332
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  11023395 tatccaaacataa-tcaattcacctaaaactcacttttaaccaaaatcaattctctcaaactcaa 11023332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 27801738 - 27801654
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| |||||||| | |||  ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| ||| ||||    
T  27801738 gaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaa 27801654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 13931659 - 13931733
Alignment:
Q  1 gtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    ||||||||||  ||||||| ||||||||||||||||| |||||||||||| |||||| |||||| |||||||||||    
T  13931659 gtaagaatcatgtttaagtgagtatatccaaacataa-tcaattcacatcaaactcatttttaaacaaaatcaatt 13931733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 23628794 - 23628708
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| ||||| || | | |||||||||||||||||||| |||| |||||||||||||  ||||||||||| ||||||||||||    
T  23628794 taagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcacttttagtcaaaatcaattatctcaaactcaa 23628708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 34718488 - 34718575
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||    |||| ||| |||||||||||||||| | ||| |||||||||||||||||||| |||| ||||||||||||    
T  34718488 taagaatcacttttgtacaagtgtattcaaacataaatcaatttatatcaaactcacttttaaccaaaattaattatctcaaactcaa 34718575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 45710086 - 45710172
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| ||   |||| ||| ||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||||||    
T  45710086 taagaatcacttctagtaaagtgtattcaaacataa-tcaattcacatacaactcacttttaatcaaaatcaattcactcaaactcaa 45710172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 291802 - 291729
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctc 79  Q
    ||||||||||||  |||| |||||||||||||| |||||||  || ||||||||||||| ||||||||||||||    
T  291802 aatcacttttaaacaagtgtatccaaacataaaccaattcatctcaaactcacttttaatcaaaatcaattctc 291729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 4347034 - 4347087
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  4347034 tatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct 4347087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 26058281 - 26058365
Alignment:
Q  5 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| |||||||| | |||  ||||||||||||||||||| ||||| || |||||||||| ||||||||||||||| ||| ||||    
T  26058281 gaattacttttaaatgagtgcatccaaacataaatcaatttacatctaattcacttttaatcaaaatcaattctcttaaaatcaa 26058365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 25061263 - 25061338
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 77  Q
    ||||||||||||||| || |   |||||||||||||||||||| |  | |||||||||||||||||||||||||||    
T  25061263 taagaatcacttttatgttaaggtatccaaacataaatcaatttatgttcaactcacttttaaccaaaatcaattc 25061338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 47085898 - 47085957
Alignment:
Q  30 aaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||| ||||| ||||    
T  47085898 aaacataaatcaattcacattcaactcacttttaattaaaatcaattctatcaaaatcaa 47085957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 9447571 - 9447636
Alignment:
Q  3 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaa 69  Q
    ||||||||||||||| | |||||||| |||||||| || ||||||||| ||||||||||||||||||    
T  9447571 aagaatcacttttaaatgagtatatctaaacataa-tccattcacatcaaactcacttttaaccaaa 9447636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 40352450 - 40352503
Alignment:
Q  24 atatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 77  Q
    |||||||||||||||||| || ||||  ||||||||||||||||||||||||||    
T  40352450 atatccaaacataaatcactttacattaaactcacttttaaccaaaatcaattc 40352503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15576490 - 15576578
Alignment:
Q  1 gtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| |||||||||||| |  ||| ||| ||||||||| ||||| | ||| |||||||||||||  |||||||||||||| ||||||||    
T  15576490 gtaaaaatcacttttaattttgtaaatcaaaacataaaacaattaatatctaactcacttttaattaaaatcaattctcttaaactcaa 15576578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 29759711 - 29759762
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    ||||||||||||||||| || |||| ||||||||||||||||| ||||||||    
T  29759711 tatccaaacataaatcattttacattcaactcacttttaaccataatcaatt 29759762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 35536109 - 35536195
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||   ||| |||| ||||||||  |||||||| || || |||||||||| |||||| |||||||||||||||||    
T  35536109 taagaatcacttttaaacgagtgtatctaaacataac-caattcacgtcaaagtcacttttaatcaaaattaattctctcaaactcaa 35536195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 43730110 - 43730059
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||||||    
T  43730110 tatccaaacacaaatcaattgacactcaactcacttttaaccaaaatcaatt 43730059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 13344836 - 13344886
Alignment:
Q  28 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    |||||||||||||| || || | ||||||||||||||||||||||||||||    
T  13344836 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattct 13344886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 43134536 - 43134574
Alignment:
Q  51 caactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  43134536 caactcacttttaaccaaaatcaattctcttaaactcaa 43134574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 47978426 - 47978368
Alignment:
Q  26 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 84  Q
    |||||| ||||||||| || |||| ||||||||||||| ||||||||||||| ||||||    
T  47978426 atccaaccataaatcactttacattcaactcacttttacccaaaatcaattcactcaaa 47978368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 11051400 - 11051339
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcactttta 63  Q
    |||||| || ||||||||  || ||| |||||||||||||||||||||| ||||||||||||    
T  11051400 taagaaccatttttaagtgtgtgtattcaaacataaatcaattcacatcaaactcactttta 11051339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 6220032 - 6219968
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||  ||||||| | ||||||| ||||||||| ||||||||||| | ||||||||||    
T  6220032 tatccaaacatgtatcaatttaaatccaacacacttttaatcaaaatcaattatatcaaactcaa 6219968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 6464679 - 6464731
Alignment:
Q  37 aatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||  |||||||||||||||||||| || || |||||||||||    
T  6464679 aatcaattcacattaaactcacttttaaccaaaatgaactcactcaaactcaa 6464731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 32365143 - 32365190
Alignment:
Q  29 caaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    |||||||||||||||| |||| |||||||||||| || ||||||||||    
T  32365143 caaacataaatcaatttacattcaactcacttttgactaaaatcaatt 32365190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 5930823 - 5930873
Alignment:
Q  28 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    |||||||||||||| || |||| ||| | ||||||||||||||||||||||    
T  5930823 ccaaacataaatcactttacattcaatttacttttaaccaaaatcaattct 5930873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 41989 - 42038
Alignment:
Q  29 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||||||||| | |||||||| ||| || ||||||||||||    
T  41989 caaacataaatcaattcacgttcaactcaccttttactaaaatcaattct 42038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 29441271 - 29441308
Alignment:
Q  52 aactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  29441271 aactcacttctaaccaaaatcaattcactcaaactcaa 29441308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 40709236 - 40709288
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    |||||||||||||||||||| |||  ||||||||| |||| |||||||||||||    
T  40709236 tatccaaacataaatcaatt-acactcaactcactattaatcaaaatcaattct 40709288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 16556295 - 16556358
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||| ||||  || || |||||||||||||||||||||| | ||||| ||||    
T  16556295 tatccaaacataaatcacttcatctc-aattcacttttaaccaaaatcaattatgtcaaattcaa 16556358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 10853355 - 10853268
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||| |||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||    
T  10853355 taagaatcacttttaagtgagtatatccaaacataaatcaatttatattaaactcacttttaaccaaaatcaattctctcaaactcaa 10853268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 50664771 - 50664858
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| |||||  || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  50664771 taagaatcacttctaagtgtgtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 50664858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21225002 - 21225090
Alignment:
Q  1 gtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| |||||||| |||| |||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  21225002 gtaagaatcgcttttaagaaagtgtatccaaacatatatcaatttacatcaaactcacttttaaccaaaatcaattctctcaaactcaa 21225090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 38172395 - 38172308
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| ||   |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38172395 taagaatcacttctattaaagtgtatccaaacataaatcaattcacatcccactcacttttaaccaaaatcaattctctcaaactcaa 38172308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 44224775 - 44224862
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||||| |||||||| ||||||||||||    
T  44224775 taagaatcacttttaagtgagtgtatccaaacataaatcaattcatatcaaactcacttttaaccataatcaattatctcaaactcaa 44224862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 53074916 - 53075002
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  53074916 taagaatcacttttaagtgagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 53075002  T

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Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 20813159 - 20813245
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactca 88  Q
    |||||||||||||| | |||||||||||||||| ||||||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  20813159 taagaatcacttttgaataagtatatccaaacaaaaatcaattcaaatccaactcacttttaaccaaacacaattctctcaaactca 20813245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 23496353 - 23496417
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23496353 tatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 23496417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 38340827 - 38340902
Alignment:
Q  10 acttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 86  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38340827 acttttaa-taagcatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctttcaaact 38340902  T

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Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 3348256 - 3348343
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| || ||||||||    
T  3348256 taagaattacttttaaggaagtgtatccaaacataaatcaatttacatccaactcacttctaaccaaaatcaattcacttaaactcaa 3348343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 4984594 - 4984681
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||   ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||    
T  4984594 taagaatcacttttaaacgagtgtatccaaacataaatcaattcacatctaactcacttttaaccaaaatcaattttctcaaattcaa 4984681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 26519681 - 26519764
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  26519681 aatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaa 26519764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 31084221 - 31084307
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||| ||||    
T  31084221 taagaatcacttttaag-aagtgtatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctttcaaaatcaa 31084307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 52966897 - 52966810
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||| ||  || ||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||    
T  52966897 taagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaaagtcacttttaaccaaaatcaattctctcaaaatcaa 52966810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 15511459 - 15511379
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactc 87  Q
    |||||||||||| ||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  15511459 aatcacttttaa-taagcgtatccaaacataaatcaattcacacccaactcacttttaaccaaaatcaattctttcaaactc 15511379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 19877448 - 19877517
Alignment:
Q  20 aagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  19877448 aagtatatctaaacataaatcaatttacatccaactcacttttaaccaaaatcaattctttcaaactcaa 19877517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 10334151 - 10334238
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||| |||||||   |||| |||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||    
T  10334151 taagaattacttttagtaaagtgtatccaaacataaatcaattcatattcaactgacttttaaccaaaatcaattctctcaaactcaa 10334238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 42318343 - 42318429
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| ||  |||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  42318343 taagaatcactttcaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 42318429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 42475722 - 42475809
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||| |||||||  |||| ||| |||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  42475722 taagaatcgcttttaacaaagtgtattcaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaa 42475809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 8424817 - 8424731
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| ||   |||| ||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  8424817 taagaatcacttctattgaagtgtatccaaacataa-tcaattcacgttcaactcacttttaaccaaaatcaattctctcaaactcaa 8424731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 53179865 - 53179948
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||  |||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| | | ||||||||    
T  53179865 aatcacttttaaaaaagtgtatccaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattatataaaactcaa 53179948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 35425365 - 35425433
Alignment:
Q  20 aagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  35425365 aagtgtatccaaacataa-tcaattcacattcaactcacttttaatcaaaatcaattctctcaaactcaa 35425433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 34561121 - 34561205
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 86  Q
    ||||||||| || ||||| | | ||||||||||||||||||||| ||| |||||||||||||||||||||||||| | |||||||    
T  34561121 taagaatcaattctaagtcaatgtatccaaacataaatcaattcgcattcaactcacttttaaccaaaatcaattttatcaaact 34561205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 38125529 - 38125443
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| ||  |||| ||||||||||||| ||||||||| || ||| ||||||||||||||||||||||||||||| ||||    
T  38125529 taagaatcactttcaaacaagtgtatccaaacataa-tcaattcacctcaaacccacttttaaccaaaatcaattctctcaaattcaa 38125443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 23207152 - 23207082
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    |||||||| |||  |||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  23207152 aatcacttgtaaaaaagtgtatccaaacataaatcaattcacatcaaactcatttttaaccaaaatcaatt 23207082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 30811601 - 30811533
Alignment:
Q  20 aagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  30811601 aagtgtatccaaacataa-tcaattcacattcaactcacttttaatcaaaatcaattctctcaaattcaa 30811533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 35930774 - 35930838
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||| |||||||||||||| ||| |||||||||||||  |||||||||||||||||||||||    
T  35930774 tatccaagcataaatcaattcatatcaaactcacttttaataaaaatcaattctctcaaactcaa 35930838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 48189506 - 48189443
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  48189506 tatccaaacataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaa 48189443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 55154549 - 55154601
Alignment:
Q  37 aatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  55154549 aatcaattcacattcaactcacttttaactaaaatcaattctctcaaactcaa 55154601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 25848045 - 25848132
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| |||||||| |   |||||||||||||||||||||| ||  ||||||||||| |||||||| |||| ||||||||||||    
T  25848045 taagaatcatttttaagtgaaggtatccaaacataaatcaattcatattaaactcactttttaccaaaattaattttctcaaactcaa 25848132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 30810033 - 30809946
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||||  ||  ||| |||||||||||||||||  |||||||||||||||||| |||||| | ||||| ||||    
T  30810033 taagaatcacttttaagtaagcgtaatcaatcataaatcaattcacatttaactcacttttaaccaaactcaattttatcaaaatcaa 30809946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 7012676 - 7012729
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  7012676 tatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct 7012729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 16246182 - 16246105
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctc 79  Q
    |||||||||||| ||   |||| | |||||||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  16246182 taagaatcacttctattaaagtgtttccaaacataaatcaatttacatctaactcacttttaactaaaatcaattctc 16246105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 14651190 - 14651103
Alignment:
Q  1 gtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||| |||||||| || ||||||||||| ||||| ||||||||| | || |||||||||||||| ||||||||||||| ||||| ||||    
T  14651190 gtaaaaatcacttctatgtaagtatatcaaaacacaaatcaatt-atattcaactcacttttaatcaaaatcaattctatcaaaatcaa 14651103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 40415373 - 40415309
Alignment:
Q  13 tttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 77  Q
    |||||||  |||||||||||||||||| |||| |||||||||||||||||||| |||||| ||||    
T  40415373 tttaagtgggtatatccaaacataaattaatttacatccaactcacttttaactaaaatcgattc 40415309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 29716742 - 29716687
Alignment:
Q  34 ataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||| ||||    
T  29716742 ataaatcaattcatatttaactcacttttaaccaaaatcaattctctcaaattcaa 29716687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 44939502 - 44939417
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| || |||| | ||||||||||||| |||||||| || |||||||||||||| |||||||||||| |||||| ||||    
T  44939502 taagaatcacttata-gtaaatgtatccaaacataa-tcaattcatattcaactcacttttaatcaaaatcaattcactcaaattcaa 44939417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 22737041 - 22737114
Alignment:
Q  16 aagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||| ||| || ||||||||||||||| |||| | ||| |||||||||||||||||||| | ||||||||||    
T  22737041 aagtaaatatgtctaaacataaatcaatttacattctacttacttttaaccaaaatcaattttttcaaactcaa 22737114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 10852775 - 10852727
Alignment:
Q  28 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    |||||||||||||| || |||| ||||||||||||||||||||||||||    
T  10852775 ccaaacataaatcactttacattcaactcacttttaaccaaaatcaatt 10852727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 42644297 - 42644349
Alignment:
Q  24 atatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    |||||||||||||||||| || |||| ||||||||||||||| ||||||||||    
T  42644297 atatccaaacataaatcactttacattcaactcacttttaactaaaatcaatt 42644349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 49526734 - 49526670
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||||||| |||  ||| |||||||||| ||||||||||||| ||||| ||||    
T  49526734 tatccaaacataaatcaatttacaatcaattcacttttaatcaaaatcaattctatcaaaatcaa 49526670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 23918881 - 23918931
Alignment:
Q  28 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    |||||||||||||| || |||| ||||||||||||||||||||| ||||||    
T  23918881 ccaaacataaatcactttacattcaactcacttttaaccaaaattaattct 23918931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 30736172 - 30736213
Alignment:
Q  37 aatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  30736172 aatcaattcacatacaactcacttttaactaaaatcaattct 30736213  T

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Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 44225601 - 44225654
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||||||| || ||||  |||||||||||||| ||||||||||||    
T  44225601 tatccaaacataaatcactttacattaaactcacttttaacgaaaatcaattct 44225654  T

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Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 21023280 - 21023229
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    |||| |||||||||||| |||| || |||||||| |||||||||||||||||    
T  21023280 tatctaaacataaatcacttcaaattcaactcacatttaaccaaaatcaatt 21023229  T

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Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 52931637 - 52931586
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    |||||||||||||||||||| |||   |||||||||||||| ||||||||||    
T  52931637 tatccaaacataaatcaatttacactaaactcacttttaactaaaatcaatt 52931586  T

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Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 30301253 - 30301199
Alignment:
Q  26 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctct 80  Q
    |||||||||||| ||| |  |||| |||||||||||||| |||||||||||||||    
T  30301253 atccaaacataattcactatacattcaactcacttttaatcaaaatcaattctct 30301199  T

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Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 32357524 - 32357597
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    |||||||||||||||| | ||| | | |||||||||||||||| ||||| || |||| || ||||||||||||||    
T  32357524 taagaatcacttttaaatgagtgttttcaaacataaatcaatttacatcaaattcac-ttcaaccaaaatcaatt 32357597  T

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Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 38626750 - 38626788
Alignment:
Q  27 tccaaacataaatcaattcacatccaactcacttttaac 65  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  38626750 tccaaacataaatcatttcacattcaactcacttttaac 38626788  T

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Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 25181246 - 25181299
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    ||||||||||||||| | || ||||  ||||||||||||| |||||||||||||    
T  25181246 tatccaaacataaataattttacattaaactcacttttaatcaaaatcaattct 25181299  T

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Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 31618975 - 31618930
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcac 47  Q
    |||||||||||| ||||| ||  |||||||||||||||||||||||    
T  31618975 taagaatcacttctaagtgagagtatccaaacataaatcaattcac 31618930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 52813278 - 52813315
Alignment:
Q  52 aactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  52813278 aactcacttctaaccaaaatcaattcactcaaactcaa 52813315  T

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Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 45423856 - 45423781
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    |||||||||||||||  | | |||||||||||||||| ||||| |  | |||||||||||||  |||||||||||||    
T  45423856 taagaatcacttttactttaatatatccaaacataaaccaatt-aagttcaactcacttttaggcaaaatcaattct 45423781  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 49330430 - 49330378
Alignment:
Q  23 tatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaat 75  Q
    ||||||||||||||| | | ||||| | ||||| |||||||||||||||||||    
T  49330430 tatatccaaacataatttagttcactttcaactaacttttaaccaaaatcaat 49330378  T

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Target: scaffold0005 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 253141 - 253228
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||||| | |   |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  253141 taagaatcacttttaactgaaggtatccaaacataaatcaattcatatccaactcacatttaaccaaaatcaattctctcaaactcaa 253228  T

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Target: scaffold0369 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 8466 - 8549
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||| ||||||  |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  8466 aatcatttttaaaaaagtgtatccaaacataaatcaattcacatcaaactcacttttaaccaaaatcaattatatcaaactcaa 8549  T

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Target: scaffold0381 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 9124 - 9210
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||| |||| ||| |||||||||||| | ||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  9124 taagaatcactttcaagtgagtgtatccaaacatata-caattcatatctaactcacttttaatcaaaatcaattctctcaaactcaa 9210  T

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Target: scaffold0983 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 2349 - 2269
Alignment:
Q  9 cacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||  |||| | ||||||||||||||||||||| || ||||||||||||||||||||||||| | ||||||||||    
T  2349 cacttttaaacaagtgtgtccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattatgtcaaactcaa 2269  T

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Target: scaffold0394 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 5882 - 5831
Alignment:
Q  38 atcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5882 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 5831  T

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Target: scaffold0014 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 118498 - 118411
Alignment:
Q  2 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    ||||||||||||||    |||| |||||||||||||||||||| ||||| |||||||||||||| |||||| ||||| ||||||||||    
T  118498 taagaatcacttttgtacaagtgtatccaaacataaatcaatttacatcaaactcacttttaacaaaaatctattctatcaaactcaa 118411  T

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Target: scaffold0007 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 29192 - 29127
Alignment:
Q  20 aagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 86  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||    
T  29192 aagtgtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctttcaaact 29127  T

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Target: scaffold0217 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 2111 - 2028
Alignment:
Q  6 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||  | |||  ||||||||||||||||||||| ||| |||||| ||| |||||||||||||||| ||||||||||    
T  2111 aatcacttttatatgagtgcatccaaacataaatcaattcatatcaaactcattttgaaccaaaatcaattctttcaaactcaa 2028  T

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Target: scaffold0172 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 15322 - 15271
Alignment:
Q  25 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    ||||||||||||||||| || | || ||||||||||||||||||||||||||    
T  15322 tatccaaacataaatcactttatattcaactcacttttaaccaaaatcaatt 15271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 199431 - 199381
Alignment:
Q  28 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 78  Q
    |||||||||||||| || || | ||||||||||||||||||||||||||||    
T  199431 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattct 199381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 65535 - 65587
Alignment:
Q  24 atatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    |||||||||||||||||| || ||||  |||||| ||||||||||||||||||    
T  65535 atatccaaacataaatcactttacattaaactcatttttaaccaaaatcaatt 65587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 301562 - 301625
Alignment:
Q  26 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 89  Q
    |||||||||||||| |||| | |  |||||||||||| ||||||||||||||  ||||||||||    
T  301562 atccaaacataaataaatttatactcaactcacttttgaccaaaatcaattcgatcaaactcaa 301625  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 99701 - 99749
Alignment:
Q  28 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 76  Q
    |||||||||||| |||| |||| ||||||||||||||  ||||||||||    
T  99701 ccaaacataaattaatttacattcaactcacttttaattaaaatcaatt 99749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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