View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18481_low_45 (Length: 231)

Name: NF18481_low_45
Description: NF18481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18481_low_45
NF18481_low_45
[»] chr2 (49 HSPs)
chr2 (15-216)||(22263446-22263650)
chr2 (15-133)||(19251476-19251593)
chr2 (23-134)||(23806215-23806326)
chr2 (23-140)||(17463354-17463471)
chr2 (15-140)||(17850841-17850966)
chr2 (29-133)||(23854693-23854797)
chr2 (15-127)||(26135828-26135940)
chr2 (17-139)||(19251727-19251848)
chr2 (15-139)||(26236126-26236250)
chr2 (15-134)||(42670974-42671093)
chr2 (15-139)||(13254496-13254620)
chr2 (15-134)||(15106071-15106190)
chr2 (15-134)||(34548578-34548696)
chr2 (23-139)||(26236358-26236473)
chr2 (23-134)||(30390463-30390574)
chr2 (15-66)||(23854921-23854972)
chr2 (24-66)||(22263263-22263305)
chr2 (24-133)||(42670722-42670833)
chr2 (23-134)||(15106330-15106439)
chr2 (23-134)||(17850591-17850701)
chr2 (15-66)||(23806024-23806075)
chr2 (15-66)||(26560809-26560860)
chr2 (17-62)||(13284484-13284529)
chr2 (15-127)||(17463103-17463214)
chr2 (19-139)||(20498746-20498864)
chr2 (24-133)||(26560561-26560668)
chr2 (15-115)||(39878125-39878225)
chr2 (82-134)||(13254758-13254810)
chr2 (84-143)||(12419046-12419105)
chr2 (84-143)||(12431106-12431165)
chr2 (91-134)||(23855025-23855068)
chr2 (24-66)||(33290313-33290355)
chr2 (17-66)||(20499002-20499051)
chr2 (23-60)||(26236277-26236314)
chr2 (85-134)||(26560880-26560929)
chr2 (17-57)||(13254693-13254733)
chr2 (23-66)||(13284671-13284714)
chr2 (82-133)||(30958689-30958740)
chr2 (86-133)||(30959997-30960044)
chr2 (26-59)||(19251653-19251686)
chr2 (23-60)||(22263350-22263387)
chr2 (82-139)||(23047904-23047961)
chr2 (82-126)||(13284735-13284779)
chr2 (91-139)||(23046706-23046754)
chr2 (23-59)||(23854825-23854861)
chr2 (30-66)||(26136087-26136123)
chr2 (86-134)||(26136143-26136191)
chr2 (16-60)||(33290231-33290275)
chr2 (82-134)||(39878395-39878446)
[»] chr8 (39 HSPs)
chr8 (15-140)||(10108368-10108493)
chr8 (15-139)||(5554868-5554992)
chr8 (15-134)||(14820299-14820417)
chr8 (15-140)||(30789762-30789887)
chr8 (15-142)||(21148191-21148318)
chr8 (24-133)||(10108634-10108743)
chr8 (24-133)||(14820558-14820667)
chr8 (24-130)||(5555133-5555239)
chr8 (23-134)||(43851669-43851779)
chr8 (24-133)||(21147941-21148051)
chr8 (15-133)||(26136690-26136808)
chr8 (23-140)||(7689786-7689903)
chr8 (23-139)||(10171406-10171522)
chr8 (15-139)||(7689523-7689646)
chr8 (15-134)||(2583324-2583443)
chr8 (15-134)||(14767762-14767878)
chr8 (15-134)||(17623142-17623260)
chr8 (19-66)||(42605825-42605872)
chr8 (23-140)||(26136948-26137064)
chr8 (23-135)||(22494647-22494758)
chr8 (17-130)||(42112993-42113105)
chr8 (86-134)||(18044153-18044201)
chr8 (17-127)||(30789519-30789628)
chr8 (26-139)||(42606019-42606132)
chr8 (27-141)||(43481581-43481696)
chr8 (15-141)||(42113239-42113362)
chr8 (24-66)||(14767579-14767621)
chr8 (82-139)||(17622889-17622946)
chr8 (84-133)||(20877069-20877118)
chr8 (82-139)||(35367409-35367466)
chr8 (26-66)||(22494457-22494497)
chr8 (23-66)||(26532855-26532898)
chr8 (23-65)||(2583583-2583625)
chr8 (23-60)||(10108552-10108589)
chr8 (23-60)||(17623046-17623083)
chr8 (20-65)||(18044089-18044134)
chr8 (23-60)||(43851823-43851860)
chr8 (15-64)||(43851919-43851968)
chr8 (82-114)||(21144598-21144630)
[»] chr7 (45 HSPs)
chr7 (15-139)||(28218418-28218542)
chr7 (15-141)||(41600213-41600339)
chr7 (15-139)||(12006795-12006919)
chr7 (15-139)||(23383755-23383879)
chr7 (15-139)||(25772586-25772710)
chr7 (15-139)||(48672534-48672658)
chr7 (23-134)||(20419540-20419651)
chr7 (23-139)||(23704924-23705039)
chr7 (23-140)||(28218176-28218294)
chr7 (15-134)||(1250461-1250580)
chr7 (15-134)||(23704666-23704784)
chr7 (15-134)||(20419791-20419911)
chr7 (19-139)||(20458950-20459069)
chr7 (23-139)||(12006540-12006655)
chr7 (23-134)||(38879727-38879839)
chr7 (15-66)||(31851494-31851545)
chr7 (15-139)||(20963750-20963872)
chr7 (17-66)||(38879981-38880030)
chr7 (25-134)||(16995204-16995312)
chr7 (23-141)||(25772361-25772478)
chr7 (23-139)||(20458691-20458806)
chr7 (23-134)||(23383503-23383615)
chr7 (82-139)||(48672276-48672333)
chr7 (15-134)||(6465859-6465977)
chr7 (15-134)||(7658224-7658339)
chr7 (23-66)||(24195059-24195102)
chr7 (23-66)||(44816907-44816950)
chr7 (23-140)||(10409637-10409753)
chr7 (23-134)||(20963498-20963610)
chr7 (23-134)||(41599962-41600073)
chr7 (15-134)||(7657973-7658094)
chr7 (87-134)||(38880048-38880095)
chr7 (15-66)||(44817090-44817141)
chr7 (23-60)||(20419695-20419732)
chr7 (23-60)||(20963654-20963691)
chr7 (86-134)||(24195198-24195246)
chr7 (15-66)||(48648484-48648535)
chr7 (17-59)||(6466037-6466079)
chr7 (87-133)||(31852157-31852203)
chr7 (86-140)||(33162862-33162916)
chr7 (23-60)||(23704843-23704880)
chr7 (19-60)||(48648416-48648457)
chr7 (16-60)||(24194973-24195017)
chr7 (82-134)||(31851245-31851297)
chr7 (23-59)||(31851398-31851434)
[»] chr3 (65 HSPs)
chr3 (23-140)||(9266973-9267090)
chr3 (15-140)||(14262291-14262416)
chr3 (15-140)||(45969913-45970038)
chr3 (15-139)||(14171841-14171965)
chr3 (15-139)||(43572388-43572512)
chr3 (15-142)||(30500296-30500422)
chr3 (23-139)||(35995677-35995793)
chr3 (15-134)||(5800609-5800728)
chr3 (24-139)||(16722255-16722370)
chr3 (15-140)||(16721989-16722114)
chr3 (15-139)||(33372405-33372529)
chr3 (15-134)||(14161875-14161994)
chr3 (15-134)||(19113020-19113139)
chr3 (15-134)||(52552943-52553062)
chr3 (24-133)||(5800869-5800977)
chr3 (15-139)||(49986526-49986651)
chr3 (24-139)||(19112763-19112879)
chr3 (15-139)||(20853951-20854074)
chr3 (28-143)||(45970183-45970299)
chr3 (15-141)||(11003729-11003855)
chr3 (24-133)||(14262041-14262150)
chr3 (24-133)||(30500048-30500155)
chr3 (24-133)||(14162135-14162243)
chr3 (38-134)||(19720337-19720433)
chr3 (15-134)||(45003500-45003619)
chr3 (23-140)||(20853693-20853811)
chr3 (15-139)||(9267230-9267353)
chr3 (23-139)||(21633159-21633275)
chr3 (15-134)||(15328467-15328583)
chr3 (25-139)||(33372669-33372783)
chr3 (15-140)||(21632899-21633019)
chr3 (17-130)||(4204717-4204829)
chr3 (82-139)||(27946187-27946244)
chr3 (15-134)||(38283554-38283673)
chr3 (82-133)||(27946114-27946165)
chr3 (82-140)||(35995997-35996055)
chr3 (23-140)||(14171585-14171701)
chr3 (83-140)||(24490242-24490299)
chr3 (17-66)||(43572648-43572697)
chr3 (23-124)||(45003759-45003859)
chr3 (19-134)||(17649269-17649383)
chr3 (24-66)||(15328724-15328766)
chr3 (15-65)||(17465622-17465672)
chr3 (15-140)||(47575527-47575651)
chr3 (23-139)||(49986791-49986907)
chr3 (24-66)||(52552764-52552806)
chr3 (82-143)||(3424769-3424830)
chr3 (23-64)||(35995837-35995878)
chr3 (85-133)||(3425973-3426021)
chr3 (82-125)||(32997220-32997263)
chr3 (23-66)||(35740887-35740930)
chr3 (82-133)||(35741906-35741957)
chr3 (15-54)||(35995933-35995972)
chr3 (15-66)||(38283805-38283856)
chr3 (23-65)||(1068912-1068954)
chr3 (23-57)||(17465527-17465561)
chr3 (23-60)||(16722173-16722210)
chr3 (85-126)||(35740829-35740870)
chr3 (23-64)||(38283728-38283769)
chr3 (23-64)||(47575431-47575472)
chr3 (23-60)||(49986710-49986747)
chr3 (23-59)||(14262195-14262231)
chr3 (82-126)||(36990981-36991025)
chr3 (82-126)||(37016421-37016465)
chr3 (23-59)||(45003679-45003715)
[»] chr6 (33 HSPs)
chr6 (15-140)||(32017759-32017883)
chr6 (15-134)||(9481186-9481305)
chr6 (15-134)||(19284133-19284252)
chr6 (23-141)||(18500312-18500429)
chr6 (15-134)||(26385529-26385648)
chr6 (23-134)||(26385282-26385393)
chr6 (15-139)||(24731934-24732061)
chr6 (23-140)||(24732201-24732317)
chr6 (19-140)||(30617965-30618081)
chr6 (82-139)||(2299635-2299692)
chr6 (17-66)||(9854144-9854193)
chr6 (83-135)||(10321736-10321788)
chr6 (15-66)||(2299564-2299615)
chr6 (28-133)||(9154884-9154990)
chr6 (23-66)||(33714559-33714602)
chr6 (86-139)||(18500655-18500708)
chr6 (24-66)||(9481446-9481488)
chr6 (15-61)||(10321986-10322032)
chr6 (88-134)||(30458904-30458950)
chr6 (16-66)||(33637631-33637681)
chr6 (17-66)||(14680954-14681003)
chr6 (17-66)||(17142749-17142798)
chr6 (23-63)||(33637791-33637831)
chr6 (82-134)||(34884561-34884613)
chr6 (15-54)||(18500602-18500641)
chr6 (15-128)||(30459156-30459267)
chr6 (17-59)||(10321809-10321851)
chr6 (82-115)||(2299363-2299396)
chr6 (23-60)||(3230022-3230059)
chr6 (23-60)||(26385437-26385474)
chr6 (24-60)||(17142798-17142834)
chr6 (23-59)||(32017695-32017731)
chr6 (82-127)||(33714494-33714541)
[»] chr4 (52 HSPs)
chr4 (15-134)||(38574223-38574342)
chr4 (15-134)||(3018015-3018135)
chr4 (15-134)||(9618984-9619103)
chr4 (15-141)||(46046679-46046804)
chr4 (15-142)||(37012962-37013088)
chr4 (15-130)||(15640724-15640838)
chr4 (23-134)||(9516614-9516725)
chr4 (15-134)||(9516865-9516984)
chr4 (26-141)||(9619245-9619360)
chr4 (23-139)||(38573968-38574083)
chr4 (15-128)||(31943959-31944073)
chr4 (15-133)||(48580121-48580239)
chr4 (25-134)||(26252502-26252611)
chr4 (15-134)||(9396703-9396822)
chr4 (15-142)||(31090316-31090443)
chr4 (15-66)||(3273694-3273745)
chr4 (83-149)||(41946954-41947020)
chr4 (23-134)||(31090064-31090176)
chr4 (23-134)||(34063986-34064097)
chr4 (15-66)||(26252340-26252391)
chr4 (15-134)||(35376167-35376285)
chr4 (29-139)||(9396968-9397077)
chr4 (82-139)||(31218303-31218360)
chr4 (15-134)||(7819019-7819137)
chr4 (15-139)||(13132196-13132318)
chr4 (17-134)||(15640972-15641090)
chr4 (15-66)||(18713032-18713083)
chr4 (23-139)||(46046429-46046539)
chr4 (24-140)||(48259821-48259938)
chr4 (15-66)||(34064237-34064288)
chr4 (23-134)||(35376391-35376501)
chr4 (15-133)||(4355887-4356004)
chr4 (23-140)||(31944213-31944330)
chr4 (24-66)||(37012779-37012821)
chr4 (16-66)||(41947112-41947162)
chr4 (17-134)||(3273877-3273992)
chr4 (23-66)||(7819277-7819320)
chr4 (85-139)||(3273620-3273674)
chr4 (24-66)||(4356145-4356187)
chr4 (15-52)||(18667375-18667412)
chr4 (23-59)||(9396882-9396918)
chr4 (86-134)||(41947180-41947228)
chr4 (30-66)||(48260021-48260057)
chr4 (82-133)||(3018332-3018383)
chr4 (82-141)||(12904744-12904803)
chr4 (90-133)||(18667620-18667663)
chr4 (82-133)||(36887685-36887736)
chr4 (24-66)||(18713224-18713266)
chr4 (23-60)||(7819196-7819233)
chr4 (23-60)||(9516769-9516806)
chr4 (23-56)||(38574127-38574160)
chr4 (82-134)||(13131944-13131996)
[»] chr1 (49 HSPs)
chr1 (23-141)||(4906959-4907077)
chr1 (15-140)||(18462284-18462408)
chr1 (23-140)||(39711335-39711452)
chr1 (15-142)||(52058263-52058390)
chr1 (15-140)||(24467627-24467751)
chr1 (15-134)||(4907217-4907336)
chr1 (17-134)||(24467884-24467998)
chr1 (15-142)||(30299228-30299354)
chr1 (19-133)||(33628949-33629063)
chr1 (19-134)||(39711078-39711191)
chr1 (15-133)||(48071966-48072084)
chr1 (24-133)||(17606572-17606679)
chr1 (26-134)||(39826312-39826420)
chr1 (15-134)||(8292808-8292927)
chr1 (15-139)||(29696564-29696687)
chr1 (15-134)||(17606308-17606431)
chr1 (23-139)||(33628689-33628805)
chr1 (23-141)||(8293070-8293189)
chr1 (23-142)||(29696821-29696939)
chr1 (29-139)||(48072230-48072340)
chr1 (23-140)||(39826048-39826165)
chr1 (17-140)||(18462541-18462664)
chr1 (15-66)||(43539419-43539470)
chr1 (17-143)||(52058006-52058132)
chr1 (23-141)||(34749135-34749252)
chr1 (15-134)||(39970900-39971020)
chr1 (17-66)||(42510086-42510135)
chr1 (23-134)||(30299494-30299605)
chr1 (19-134)||(34749364-34749479)
chr1 (24-66)||(20995932-20995974)
chr1 (17-66)||(7473864-7473913)
chr1 (82-139)||(20995697-20995754)
chr1 (82-134)||(18342339-18342391)
chr1 (23-139)||(30252161-30252279)
chr1 (15-66)||(13229804-13229855)
chr1 (24-66)||(16294211-16294253)
chr1 (15-60)||(20995747-20995792)
chr1 (86-133)||(27039643-27039690)
chr1 (23-66)||(39970718-39970761)
chr1 (17-60)||(42510167-42510210)
chr1 (86-133)||(42510341-42510388)
chr1 (82-133)||(43539669-43539720)
chr1 (24-66)||(43539611-43539653)
chr1 (23-60)||(17606490-17606527)
chr1 (84-133)||(37236723-37236772)
chr1 (23-55)||(18342282-18342314)
chr1 (23-59)||(34749296-34749332)
chr1 (23-59)||(39826209-39826245)
chr1 (23-59)||(48072144-48072180)
[»] chr5 (42 HSPs)
chr5 (17-134)||(23979158-23979275)
chr5 (15-139)||(7126172-7126296)
chr5 (15-140)||(14143900-14144024)
chr5 (15-139)||(14411696-14411820)
chr5 (15-139)||(24074302-24074426)
chr5 (23-139)||(24837168-24837284)
chr5 (15-134)||(24837424-24837543)
chr5 (17-141)||(6817120-6817243)
chr5 (24-134)||(31799644-31799754)
chr5 (15-134)||(41001608-41001726)
chr5 (24-133)||(7125923-7126031)
chr5 (19-140)||(17762281-17762401)
chr5 (15-139)||(31799895-31800018)
chr5 (24-134)||(18336720-18336829)
chr5 (24-133)||(14144165-14144274)
chr5 (23-139)||(17762545-17762661)
chr5 (15-134)||(29444810-29444929)
chr5 (15-66)||(6817376-6817427)
chr5 (23-139)||(4918988-4919105)
chr5 (15-134)||(18336471-18336591)
chr5 (15-139)||(24650954-24651078)
chr5 (23-140)||(30512286-30512402)
chr5 (23-140)||(30552626-30552742)
chr5 (15-134)||(4919245-4919363)
chr5 (15-133)||(27159212-27159327)
chr5 (15-133)||(20709467-20709584)
chr5 (24-133)||(29445070-29445178)
chr5 (23-134)||(993754-993862)
chr5 (19-114)||(994005-994100)
chr5 (24-128)||(24074566-24074672)
chr5 (26-66)||(41001425-41001465)
chr5 (17-66)||(20709284-20709333)
chr5 (24-65)||(27159063-27159104)
chr5 (17-56)||(22571159-22571198)
chr5 (28-66)||(24650772-24650810)
chr5 (23-66)||(14411929-14411972)
chr5 (82-124)||(41001370-41001412)
chr5 (23-60)||(7126076-7126113)
chr5 (23-60)||(18336638-18336675)
chr5 (23-59)||(20709371-20709407)
chr5 (17-65)||(22571230-22571278)
chr5 (90-134)||(24650706-24650750)
[»] scaffold0117 (1 HSPs)
scaffold0117 (15-133)||(12237-12355)
[»] scaffold0361 (3 HSPs)
scaffold0361 (23-139)||(4826-4941)
scaffold0361 (19-140)||(4560-4682)
scaffold0361 (23-60)||(4745-4782)
[»] scaffold0449 (2 HSPs)
scaffold0449 (15-140)||(7454-7580)
scaffold0449 (23-134)||(7230-7341)
[»] scaffold0185 (3 HSPs)
scaffold0185 (17-139)||(3868-3990)
scaffold0185 (23-56)||(4028-4061)
scaffold0185 (15-55)||(4124-4164)
[»] scaffold0809 (3 HSPs)
scaffold0809 (15-141)||(1408-1533)
scaffold0809 (84-139)||(1730-1785)
scaffold0809 (23-61)||(1673-1711)
[»] scaffold0176 (1 HSPs)
scaffold0176 (15-139)||(15887-16007)
[»] scaffold0141 (2 HSPs)
scaffold0141 (23-126)||(8585-8688)
scaffold0141 (15-139)||(8324-8446)
[»] scaffold0477 (2 HSPs)
scaffold0477 (86-139)||(4879-4932)
scaffold0477 (23-66)||(5011-5054)
[»] scaffold0352 (2 HSPs)
scaffold0352 (82-139)||(6001-6058)
scaffold0352 (24-139)||(4666-4781)


Alignment Details
Target: chr2 (Bit Score: 139; Significance: 7e-73; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 15 - 216
Target Start/End: Original strand, 22263446 - 22263650
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnn--acagggactaaaaccggaattcactaatatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||           |||| ||||||||||||||||| ||||||||    
T  22263446 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctgaatctttttttttttacagagactaaaaccggaattcgctaatatt 22263545  T
Q  113 acaggaacgaaaagaggtattttcccttatacttttactt-attcagatcaatatttttgtatttaacttgcgtggttgaatgtttttaattagtcacaa 211  Q
    |||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22263546 acaggaacgaaaagaggtatttacccttatacttttgctttattcagatcaatatttttgtatttaacttgcgtggttgaatgtttttaattagtcacaa 22263645  T
Q  212 gttaa 216  Q
    |||||    
T  22263646 gttaa 22263650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 19251593 - 19251476
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||         |||||||||||||||| ||||| ||||||||||    
T  19251593 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc-ttttttttacagggactaaaaccgaaattcgctaatattac 19251495  T
Q  115 aggaacgaaaagaggtatt 133  Q
    ||| |||||||||||||||    
T  19251494 agggacgaaaagaggtatt 19251476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 134
Target Start/End: Original strand, 23806215 - 23806326
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||         |||||||||||||||| ||||| ||||||||||||| || |    
T  23806215 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccgaaattcgctaatattacagggacaa 23806314  T
Q  123 aaagaggtattt 134  Q
    ||||||||||||    
T  23806315 aaagaggtattt 23806326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 17463354 - 17463471
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||| |||||||||||||||||| ||||||||||||||||||  ||||         |||||||||||||||||||||| |||||||||||||  |||    
T  17463354 gagggatcaaaagtggaagaatatgcaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacaggggcga 17463453  T
Q  123 aaagaggtattttccctt 140  Q
    |||||||||||| |||||    
T  17463454 aaagaggtatttaccctt 17463471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 17850841 - 17850966
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||  || |         |||| ||||||||||| ||||| ||||||||||    
T  17850841 gatgaaaagagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaagcattttatttacagtgactaaaaccgaaattcgctaatattac 17850940  T
Q  115 aggaacgaaaagaggtattttccctt 140  Q
    ||| |||||||||||||||| |||||    
T  17850941 agggacgaaaagaggtatttaccctt 17850966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 23854797 - 23854693
Alignment:
Q  29 ccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaaaagag 128  Q
    ||||||||||||||||||||||||||||||||||||||  ||||         |||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  23854797 ccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccgaaattcgctaatattacagggacgaaaagag 23854698  T
Q  129 gtatt 133  Q
    |||||    
T  23854697 gtatt 23854693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 26135940 - 26135828
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||  ||||         ||||||||||||| |||||||| ||||||||||    
T  26135940 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcggaattcgctaatattac 26135841  T
Q  115 aggaacgaaaaga 127  Q
    ||| |||||||||    
T  26135840 agggacgaaaaga 26135828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 19251727 - 19251848
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacag 116  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||| ||||  ||||         ||||||||||||||||||||||||||||||||||     
T  19251727 tgaaatgagggaccgaaagtggaagaatatgaaattacaaggacagaatctaaatctttttttt-acagggactaaaaccggaattcactaatattacaa 19251825  T
Q  117 gaacgaaaagaggtattttccct 139  Q
    | |||||||||||||||| ||||    
T  19251826 ggacgaaaagaggtatttaccct 19251848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 26236250 - 26236126
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||   ||||         ||||||||||||||| |||||| ||||||||||    
T  26236250 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagggacaaaatataaatctttttttatacagggactaaaaccagaattcgctaatattac 26236151  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    | | |||||||||| ||||| ||||    
T  26236150 aaggacgaaaagagatatttaccct 26236126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 42670974 - 42671093
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||  ||||         |||||||||||||| | ||||| |||||| |||    
T  42670974 gatgaaaggagggaccaaaagtggaaaaatatgaaattacagggacataatctaaatccttttttttacagggactaaaactgaaattcgctaatactac 42671073  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| || |||||||||||||    
T  42671074 agggacaaaaagaggtattt 42671093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 13254620 - 13254496
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||| |||||||||| |||||| |||||||||| ||||||||||  ||||         ||||||| |||||||  ||||| ||||||||||    
T  13254620 gatgaaaggaggaaccaaaagtgaaagaatctgaaattacaaggacaaaatctaaatcttttattttacagggagtaaaaccaaaattcgctaatattac 13254521  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    ||||||| |||||||||||| ||||    
T  13254520 aggaacggaaagaggtatttaccct 13254496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 15106190 - 15106071
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||| ||| | |||||||||||||||||||  ||||         ||||||| |||||||| ||||| ||||||||||    
T  15106190 gatgaaaggagggaccaaaagtggaataatctaaaattacagggacaaaatctaaatctttttatttacagggattaaaaccgaaattcgctaatattac 15106091  T
Q  115 aggaacgaaaagaggtattt 134  Q
     || |||||||||| |||||    
T  15106090 ggggacgaaaagagatattt 15106071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 34548696 - 34548578
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||| ||||||| |||||| |||||||||||||| ||||||||||  ||||         |||||||||||||||  ||||||||||||||||    
T  34548696 gatgaaaggagtgaccaaaggtggaacaatatgaaattacatggacaaaatctaaatctttttttt-acagggactaaaaccaaaattcactaatattac 34548598  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| ||||||||| ||||||    
T  34548597 agggacgaaaagaagtattt 34548578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 26236358 - 26236473
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||||||| ||||||||| |||||||||||||||||||||  ||||          || |||||||||||| ||||| ||||||||||||| ||||    
T  26236358 gagggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatcttttttttc-caaggactaaaaccgaaattcgctaatattacagggacga 26236456  T
Q  123 aaagaggtattttccct 139  Q
    |||||||||||| ||||    
T  26236457 aaagaggtatttaccct 26236473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 30390574 - 30390463
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | |          ||||||| ||||| |||||||| ||||||||||| | ||||    
T  30390574 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaattttttttttttacagggattaaaatcggaattcgctaatattacatggacga 30390475  T
Q  123 aaagaggtattt 134  Q
    |||||| |||||    
T  30390474 aaagagatattt 30390463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 23854921 - 23854972
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  23854921 gatgaaaggagggaccaaaagtggaagaatataaaattacagagacaaaatc 23854972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 22263305 - 22263263
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22263305 agggaccaaaagtggaagaatatgaaattacagggacaaaatc 22263263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 42670833 - 42670722
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnn--acagggactaaaaccggaattcactaatattacaggaacg 121  Q
    |||||||||||||||||||||||||||||||| ||||||||||  | |            |||||||||||||||||||||| ||| ||||||||| |||    
T  42670833 agggaccaaaagtggaagaatatgaaattacaaggacaaaatctaattttttttttttttacagggactaaaaccggaattcgctactattacagggacg 42670734  T
Q  122 aaaagaggtatt 133  Q
    ||||||||||||    
T  42670733 aaaagaggtatt 42670722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 134
Target Start/End: Original strand, 15106330 - 15106439
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||| ||||||||||||||| |||||||||||||||||||||  |||          ||||||||||||| || ||||| |||||||||| || ||||    
T  15106330 gagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaat--ttttttttacagggactaaaatcgaaattcgctaatattacggggacga 15106427  T
Q  123 aaagaggtattt 134  Q
    ||||||||||||    
T  15106428 aaagaggtattt 15106439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 17850701 - 17850591
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||| ||||||||||||||| | ||||||||| |||||||||  ||||         | ||||||||||| |||||||| ||||||||||||| ||||    
T  17850701 gagggatcaaaagtggaagaatcttaaattacagagacaaaatctaaatctttttttt-atagggactaaaatcggaattcgctaatattacagggacga 17850603  T
Q  123 aaagaggtattt 134  Q
    ||||||||||||    
T  17850602 aaagaggtattt 17850591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 23806075 - 23806024
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    |||||||||||||||||||||||||||||| | ||||||||||| |||||||    
T  23806075 gatgaaaggagggaccaaaagtggaagaatctaaaattacaggggcaaaatc 23806024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 26560809 - 26560860
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  26560809 gatgaaaggagagaccaaaagtggaagaatatgaaattatatggacaaaatc 26560860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 13284529 - 13284484
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaa 62  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||    
T  13284529 tgaaatgagggactaaaagtggaagaatatgaaattacagggacaa 13284484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 17463214 - 17463103
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||| |||||||||||||||| ||||  |||||||||||||||||||| | |||          |||| ||||||||||||||||| |||||||||     
T  17463214 gatgaaatgagggaccaaaagtgggagaacctgaaattacagggacaaaat-ctaatttttttttttacagcgactaaaaccggaattcgctaatattat 17463116  T
Q  115 aggaacgaaaaga 127  Q
    ||| |||||||||    
T  17463115 agggacgaaaaga 17463103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 20498864 - 20498746
Alignment:
Q  19 aaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacagga 118  Q
    |||||||||||||||||||||||||| |||||| ||||||||| ||||  |||          |||||||||||||||| ||||| |||||||||||       
T  20498864 aaaggagggaccaaaagtggaagaatctgaaat-acagggacataatctaaat-attttttttacagggactaaaaccgtaattcgctaatattacatag 20498767  T
Q  119 acgaaaagaggtattttccct 139  Q
    |||||||||||||||| ||||    
T  20498766 acgaaaagaggtatttaccct 20498746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 26560668 - 26560561
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaa 123  Q
    ||||||||||||||||||||| ||||||||||||||| |||||  ||||         ||||||||||||| || |||||  |||||||||||| |||||    
T  26560668 agggaccaaaagtggaagaatctgaaattacagggactaaatctaaatc--tttttttacagggactaaaatcgaaattcgttaatattacagggacgaa 26560571  T
Q  124 aagaggtatt 133  Q
    ||||| ||||    
T  26560570 aagagatatt 26560561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 39878225 - 39878125
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||| |||||||||||||||||| |||||||||||  ||| ||||  |||          |||||||||||||||||||||| ||||||||||    
T  39878225 gatgaaaggagtgaccaaaagtggaagaatctgaaattacagatacataatctaaatatctttttttacagggactaaaaccggaattcgctaatattac 39878126  T
Q  115 a 115  Q
    |    
T  39878125 a 39878125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 13254758 - 13254810
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattt 134  Q
    |||| ||||||||||||||||| ||||||||||||| |||||||||| |||||    
T  13254758 acagagactaaaaccggaattcgctaatattacagggacgaaaagagatattt 13254810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 12419046 - 12419105
Alignment:
Q  84 agggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttcccttata 143  Q
    |||||||||||||||||||| ||||||||||||| || ||||| ||||||  ||||||||    
T  12419046 agggactaaaaccggaattcgctaatattacagggaccaaaagtggtattaacccttata 12419105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 12431106 - 12431165
Alignment:
Q  84 agggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttcccttata 143  Q
    |||||||||||||||||||| ||||||||||||| || ||||| ||||||  ||||||||    
T  12431106 agggactaaaaccggaattcgctaatattacagggaccaaaagtggtattaacccttata 12431165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 23855025 - 23855068
Alignment:
Q  91 aaaaccggaattcactaatattacaggaacgaaaagaggtattt 134  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||    
T  23855025 aaaaccggaattcgctaatattacagggacgaaaagaggtattt 23855068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 33290313 - 33290355
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    |||||||||||||||||||||||||||||||| || |||||||    
T  33290313 agggaccaaaagtggaagaatatgaaattacaaggtcaaaatc 33290355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 20499002 - 20499051
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||| || |||||||||||| |||||| |||||||||||||||||||||    
T  20499002 tgaaatgaaggaccaaaagtgaaagaatctgaaattacagggacaaaatc 20499051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 26236314 - 26236277
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  26236314 gagggaccaaaagtggaggaatatgaaattacagggac 26236277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 26560880 - 26560929
Alignment:
Q  85 gggactaaaaccggaattcactaatattacaggaacgaaaagaggtattt 134  Q
    |||||||||| |||||||| ||||||||||| | ||||||||||||||||    
T  26560880 gggactaaaatcggaattcgctaatattacaaggacgaaaagaggtattt 26560929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 13254693 - 13254733
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagg 57  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  13254693 tgaaatgagggaccaaaagtggaagaatctgaaattacagg 13254733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 13284671 - 13284714
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||    
T  13284671 gagggaccaaaagtggaggaatctgaaattacaaggacaaaatc 13284714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 30958740 - 30958689
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtatt 133  Q
    |||||||||||||||| ||||| ||||||||||||| || ||||| ||||||    
T  30958740 acagggactaaaaccgaaattcgctaatattacagggaccaaaagtggtatt 30958689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 30959997 - 30960044
Alignment:
Q  86 ggactaaaaccggaattcactaatattacaggaacgaaaagaggtatt 133  Q
    |||||||||||||||||| ||||||||||||| || ||||| ||||||    
T  30959997 ggactaaaaccggaattcgctaatattacagggaccaaaagtggtatt 30960044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 59
Target Start/End: Complemental strand, 19251686 - 19251653
Alignment:
Q  26 ggaccaaaagtggaagaatatgaaattacaggga 59  Q
    |||||||||||||| |||||||||||||||||||    
T  19251686 ggaccaaaagtggaggaatatgaaattacaggga 19251653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 22263350 - 22263387
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  22263350 gagggaccaaaagtggaggaatttgaaattacagggac 22263387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 23047904 - 23047961
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttccct 139  Q
    |||||||  ||||||||||||| || |||||||||| ||||||| |||||||| ||||    
T  23047904 acagggagcaaaaccggaattcgctcatattacagggacgaaaataggtatttaccct 23047961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 13284735 - 13284779
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaag 126  Q
    |||||||||||||||| ||||| ||||||||||||| || |||||    
T  13284735 acagggactaaaaccgaaattcgctaatattacagggaccaaaag 13284779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 23046754 - 23046706
Alignment:
Q  91 aaaaccggaattcactaatattacaggaacgaaaagaggtattttccct 139  Q
    ||||||||||||| || |||||||| | |||||||||||||||| ||||    
T  23046754 aaaaccggaattcgctcatattacaaggacgaaaagaggtatttaccct 23046706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 23854825 - 23854861
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacaggga 59  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  23854825 gagggaccaaaagtggaggaatttgaaattacaggga 23854861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 26136087 - 26136123
Alignment:
Q  30 caaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||||||||||||||||||  |||||||||    
T  26136087 caaaagtggaagaatatgaaattacaatgacaaaatc 26136123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 26136143 - 26136191
Alignment:
Q  86 ggactaaaaccggaattcactaatattacaggaacgaaaagaggtattt 134  Q
    |||||||||||| |||||  |||||||||| | ||||||||||||||||    
T  26136143 ggactaaaaccgaaattcgttaatattacaaggacgaaaagaggtattt 26136191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 33290275 - 33290231
Alignment:
Q  16 atgaaaggagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    |||||| ||||||||||||||||| | || |||||||||||||||    
T  33290275 atgaaatgagggaccaaaagtggaggtatctgaaattacagggac 33290231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 39878395 - 39878446
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattt 134  Q
    |||||||| ||||| ||||||| ||||||||||||| || |||||||||||||    
T  39878395 acagggacgaaaactggaattcgctaatattacagg-acaaaaagaggtattt 39878446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 4e-37; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 10108493 - 10108368
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||         |||||||||||||||||||||| ||||||||||    
T  10108493 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattac 10108394  T
Q  115 aggaacgaaaagaggtattttccctt 140  Q
    ||| |||||||||||||||| |||||    
T  10108393 agggacgaaaagaggtatttaccctt 10108368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 5554992 - 5554868
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||         |||||||||||||||||||||| ||||||||||    
T  5554992 gatgaaagaagggaccaaaagtggaagaatatgaaattatagggacaaaatctgaatctttttttttacagggactaaaaccggaattcgctaatattac 5554893  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    ||| |||||||||||||||| ||||    
T  5554892 agggacgaaaagaggtatttaccct 5554868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 14820417 - 14820299
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||         ||||| |||||||||||||||| ||||||||||    
T  14820417 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc-ttttttttacaggaactaaaaccggaattcgctaatattac 14820319  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| ||||||||||||||||    
T  14820318 agggacgaaaagaggtattt 14820299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 30789762 - 30789887
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||| || ||||||||||||||||||| |||||||||||||||||||||  ||||         ||||||||||||||||||||| |||||||||||    
T  30789762 gatgaaacgatggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaatttactaatattac 30789861  T
Q  115 aggaacgaaaagaggtattttccctt 140  Q
    ||| |||||||||||||||| |||||    
T  30789862 agggacgaaaagaggtatttaccctt 30789887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 21148191 - 21148318
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||  | |          |||||||||||||||||||||||||||||||||    
T  21148191 gatgaaaggagggactaaaagtggaagaatatgaaattacaaggacaaaatctaattttttttttttacagggactaaaaccggaattcactaatattac 21148290  T
Q  115 aggaacgaaaagaggtattttcccttat 142  Q
    ||  |||||||||||||||| |||||||    
T  21148291 agagacgaaaagaggtatttacccttat 21148318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 10108634 - 10108743
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaa 123  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||         |||||||||||||||||||||  ||||||||||||| |||||    
T  10108634 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaatttgctaatattacagggacgaa 10108733  T
Q  124 aagaggtatt 133  Q
    ||||||||||    
T  10108734 aagaggtatt 10108743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 14820558 - 14820667
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaa 123  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||         |||||||||||||||||||||| ||||||||||||| || ||    
T  14820558 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggactaa 14820657  T
Q  124 aagaggtatt 133  Q
    ||||||||||    
T  14820658 aagaggtatt 14820667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 5555133 - 5555239
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaa 123  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||         |||| ||||||||||| ||||| ||||||||||||| |||||    
T  5555133 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagagactaaaaccgaaattcgctaatattacagggacgaa 5555232  T
Q  124 aagaggt 130  Q
    |||||||    
T  5555233 aagaggt 5555239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 43851779 - 43851669
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||| ||||||||||||||| |||||||||||||||||||||  ||||         |||||||||||||||||||||| ||||||||||||| ||||    
T  43851779 gagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttgttt-acagggactaaaaccggaattcgctaatattacagggacga 43851681  T
Q  123 aaagaggtattt 134  Q
    ||||||||||||    
T  43851680 aaagaggtattt 43851669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 21148051 - 21147941
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnn-acagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||||||||||||||||| |||||||||||||||||||||  ||||          |||||||||||||||||||||| ||||||||||||| || |    
T  21148051 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgctaatattacagggacaa 21147952  T
Q  123 aaagaggtatt 133  Q
    |||||||||||    
T  21147951 aaagaggtatt 21147941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 26136808 - 26136690
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||| | ||||| ||||||||| |||||||||| ||||||||||  |||          |||||||||||||| ||||||| ||||||||||    
T  26136808 gatgaaaggaggaatcaaaattggaagaatctgaaattacaaggacaaaatctaaatttttttttttacagggactaaaactggaattcgctaatattac 26136709  T
Q  115 aggaacgaaaagaggtatt 133  Q
    |||||||||||||||||||    
T  26136708 aggaacgaaaagaggtatt 26136690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 7689786 - 7689903
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||| ||||||||||||||| ||||||||||||||||||||   ||||         ||| ||||||||| |||||||| ||||||||||||| ||||    
T  7689786 gagggatcaaaagtggaagaatctgaaattacagggacaaaatttaaatctttttttttacacggactaaaatcggaattcgctaatattacagggacga 7689885  T
Q  123 aaagaggtattttccctt 140  Q
    |||||||||||| |||||    
T  7689886 aaagaggtatttaccctt 7689903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 10171406 - 10171522
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||||||||||| |||||| | |||||||||||||||||||  |||          |||||||||||||||||||||| ||||||||||||| ||||    
T  10171406 gagggaccaaaagtgaaagaatctaaaattacagggacaaaatctaaatagttttttttacagggactaaaaccggaattcgctaatattacagggacga 10171505  T
Q  123 aaagaggtattttccct 139  Q
    |||| ||||||| ||||    
T  10171506 aaagcggtatttaccct 10171522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 7689646 - 7689523
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||| |||||||||||||||||||||| |||||||||| |||| |||||  ||||         ||| |||||||| ||| ||||| ||||||||||    
T  7689646 gatgaaaagagggaccaaaagtggaagaatctgaaattacaaggac-aaatctaaatctttttatttacaaggactaaagccgaaattcgctaatattac 7689548  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    ||| |||||||||||||||| ||||    
T  7689547 agggacgaaaagaggtatttaccct 7689523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 2583443 - 2583324
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||| ||||||| |||||||  ||||||||||||||||||||  ||||         ||| | ||||||| || ||||| ||||||||||    
T  2583443 gatgaaaggagggatcaaaagtagaagaatccgaaattacagggacaaaatctaaatcttttattttacaagaactaaaatcgaaattcgctaatattac 2583344  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||||| ||||||||||||||    
T  2583343 aggaatgaaaagaggtattt 2583324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 14767762 - 14767878
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||| |||||||  ||| |||||||||||||||||||||||||||||||  | |          ||||||||||||| || |||| |||||||||||    
T  14767762 gatgaaaagagggacacaaactggaagaatatgaaattacagggacaaaatctaatt---tttttttacagggactaaaaacgaaatttactaatattac 14767858  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||||||||||||||||||||    
T  14767859 aggaacgaaaagaggtattt 14767878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 17623142 - 17623260
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||||||||  ||||         ||||| ||||||||| |||||  ||||||||||    
T  17623142 gatgaaaggagtgaccaaaagtggaagaatttgaaattacaaggacaaaatctaaatc-ttttttttacaggcactaaaaccagaattggctaatattac 17623240  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| | ||||||||||||||    
T  17623241 agggatgaaaagaggtattt 17623260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 42605872 - 42605825
Alignment:
Q  19 aaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42605872 aaaggagggaccaaaagtggaagaatatgaaattacagggataaaatc 42605825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 26136948 - 26137064
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||||||||||||||||| |||||||||||||||||||| | |||            |||||||||||| | ||||||||||||||||||| ||||    
T  26136948 gagggaccaaaagtggaagaatctgaaattacagggacaaaat-ctaattttttttttactagggactaaaactgaaattcactaatattacagggacga 26137046  T
Q  123 aaagaggtattttccctt 140  Q
    |||| ||||||| |||||    
T  26137047 aaagtggtatttaccctt 26137064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 22494647 - 22494758
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||||||||||||||||| |||||||||||||||||| ||  ||||         || || ||||||||| ||||||||| |||||||||| ||||    
T  22494647 gagggaccaaaagtggaagaatttgaaattacagggacaaattctaaatctctttttttac-ggaactaaaaccagaattcactgatattacagggacga 22494745  T
Q  123 aaagaggtatttt 135  Q
    | |||||||||||    
T  22494746 agagaggtatttt 22494758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 42113105 - 42112993
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacag 116  Q
    ||||| ||||||||||||||| |||||| | |||||||||||||| ||||  ||||         ||||||||||||| |||||||| ||||||||||||    
T  42113105 tgaaatgagggaccaaaagtgaaagaatcttaaattacagggacataatctaaatctttttttt-acagggactaaaatcggaattcgctaatattacag 42113007  T
Q  117 gaacgaaaagaggt 130  Q
    | ||||||||||||    
T  42113006 ggacgaaaagaggt 42112993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 18044153 - 18044201
Alignment:
Q  86 ggactaaaaccggaattcactaatattacaggaacgaaaagaggtattt 134  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  18044153 ggactaaaaccggaattcgctaatattacagggacgaaaagaggtattt 18044201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 30789628 - 30789519
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacag 116  Q
    ||||| |||||| |||||||||| |||| ||||||||||| |||||||||  ||||         ||||||||||||| |||||||| ||||||||||||    
T  30789628 tgaaatgagggatcaaaagtggaggaatctgaaattacagagacaaaatctaaatctttttttt-acagggactaaaatcggaattcgctaatattacag 30789530  T
Q  117 gaacgaaaaga 127  Q
    | |||||||||    
T  30789529 ggacgaaaaga 30789519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 139
Target Start/End: Original strand, 42606019 - 42606132
Alignment:
Q  26 ggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaaaa 125  Q
    ||||||||||||||||||| ||||||||| |||||||||||  ||||         |||  |||||||||| |||||| ||||||||||||| || ||||    
T  42606019 ggaccaaaagtggaagaatttgaaattacggggacaaaatctaaatctttttttttacattgactaaaaccagaattcgctaatattacagggacaaaaa 42606118  T
Q  126 gaggtattttccct 139  Q
    ||| ||||| ||||    
T  42606119 gagatatttaccct 42606132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 43481581 - 43481696
Alignment:
Q  27 gaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnn-acagggactaaaaccggaattcactaatattacaggaacgaaaa 125  Q
    |||||| ||||||||||| ||||||||||||||||||||   ||||          |||| ||||||||||||||||| ||||||||||||  |||||||    
T  43481581 gaccaagagtggaagaatttgaaattacagggacaaaatttaaatcttttttttttacagagactaaaaccggaattcgctaatattacagtgacgaaaa 43481680  T
Q  126 gaggtattttccctta 141  Q
    ||| ||||| ||||||    
T  43481681 gagatatttaccctta 43481696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 42113239 - 42113362
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||||| ||||  | |          ||||| |||||||||| |||||  |||||||||    
T  42113239 gatgaaaggagggatcaaaagtggaagaatttgaaattaaagggacataatctaatt---tttttttacaggaactaaaaccgaaattcgttaatattac 42113335  T
Q  115 aggaacgaaaagaggtattttccctta 141  Q
    ||| ||||||||| |||||| ||||||    
T  42113336 agggacgaaaagatgtatttaccctta 42113362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 14767621 - 14767579
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||||||||| ||| |||||||||||||||||||||    
T  14767621 agggaccaaaagtggaaaaatctgaaattacagggacaaaatc 14767579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 17622946 - 17622889
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttccct 139  Q
    |||||||||||||| | ||||| ||||||||||| | |||||||||||||||| ||||    
T  17622946 acagggactaaaactgaaattcgctaatattacaaggacgaaaagaggtatttaccct 17622889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 20877069 - 20877118
Alignment:
Q  84 agggactaaaaccggaattcactaatattacaggaacgaaaagaggtatt 133  Q
    |||||||||||||||||||| || |||||||||| || ||||||||||||    
T  20877069 agggactaaaaccggaattcgctcatattacagggaccaaaagaggtatt 20877118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 35367466 - 35367409
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttccct 139  Q
    ||||||| |||||||||||||| |||||||| |||| || ||||||||||||| ||||    
T  35367466 acagggattaaaaccggaattcgctaatattgcagggaccaaaagaggtatttaccct 35367409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 22494497 - 22494457
Alignment:
Q  26 ggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||| |||||||||||||||||||||| ||||||||    
T  22494497 ggaccaaaaatggaagaatatgaaattacaggaacaaaatc 22494457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 26532898 - 26532855
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    |||||| ||||||||||| ||| |||||||||||||||||||||    
T  26532898 gagggatcaaaagtggaaaaatttgaaattacagggacaaaatc 26532855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 2583583 - 2583625
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaat 65  Q
    |||| ||||||||||||||||| |||||||| |||||||||||    
T  2583583 gaggaaccaaaagtggaagaatctgaaattatagggacaaaat 2583625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 10108589 - 10108552
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  10108589 gagggaccaaaagtggaggaatttgaaattacagggac 10108552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 17623046 - 17623083
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  17623046 gagggaccaaaagtggaggaatctgaaattacagggac 17623083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 18044089 - 18044134
Alignment:
Q  20 aaggagggaccaaaagtggaagaatatgaaattacagggacaaaat 65  Q
    ||||||||| |||||| | |||||| ||||||||||||||||||||    
T  18044089 aaggagggatcaaaagcgaaagaatctgaaattacagggacaaaat 18044134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 43851823 - 43851860
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  43851823 gagggatcaaaagtggaggaatatgaaattacagggac 43851860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 43851919 - 43851968
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaa 64  Q
    ||||||||||||||| |||||||||||||| |  |||||||| |||||||    
T  43851919 gatgaaaggagggacaaaaagtggaagaatcttgaattacagagacaaaa 43851968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 21144630 - 21144598
Alignment:
Q  82 acagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||| ||||||||||    
T  21144630 acagggactaaaaccggaattctctaatattac 21144598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 4e-34; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 28218418 - 28218542
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||         |||||||||||||||||||||| ||||||||||    
T  28218418 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattac 28218517  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    ||| |||||||||||||||| ||||    
T  28218518 agggacgaaaagaggtatttaccct 28218542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 41600213 - 41600339
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||         |||||||||||||||||||||| ||||||||||    
T  41600213 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattac 41600312  T
Q  115 aggaacgaaaagaggtattttccctta 141  Q
    ||| || ||||||||||||| ||||||    
T  41600313 agggacaaaaagaggtatttaccctta 41600339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 12006795 - 12006919
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||         ||||||||||||| |||||||| ||||||||||    
T  12006795 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaatcggaattcgctaatattac 12006894  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    | |||||||||||||||||| ||||    
T  12006895 atgaacgaaaagaggtatttaccct 12006919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 23383755 - 23383879
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||          |||||||||||| | |||||||||||||||||    
T  23383755 gatgaaaggagggaccaaaggtggaagaatatgaaattacagggacaaaatctaaatcttttttttttcagggactaaaatcagaattcactaatattac 23383854  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    ||| |||||||||||||||| ||||    
T  23383855 agggacgaaaagaggtatttaccct 23383879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 25772586 - 25772710
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||  ||||         |||||||||||||| |||||||||||||||||     
T  25772586 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaactggaattcactaatattat 25772685  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    ||| |||||||||| ||||| ||||    
T  25772686 agggacgaaaagagatatttaccct 25772710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 48672534 - 48672658
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||  ||||         |||||||||||||||| ||||| ||||||||||    
T  48672534 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggataaaatctaaatctttttatttacagggactaaaaccgaaattcgctaatattac 48672633  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    ||  |||||||||||||||| ||||    
T  48672634 agagacgaaaagaggtatttaccct 48672658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 20419651 - 20419540
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||||||| |||||||||||||||||||||||||||||||  ||||         |||||||||||||||||||||| ||||||||| ||| ||||    
T  20419651 gagggaccaaaaatggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattatagggacga 20419552  T
Q  123 aaagaggtattt 134  Q
    ||||||||||||    
T  20419551 aaagaggtattt 20419540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 23704924 - 23705039
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||         |||||||||||||||||||||| ||||||||||||  ||||    
T  23704924 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc-ttttttttacagggactaaaaccggaattcgctaatattacagagacga 23705022  T
Q  123 aaagaggtattttccct 139  Q
    |||||||||||| ||||    
T  23705023 aaagaggtatttaccct 23705039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 28218294 - 28218176
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnn-acagggactaaaaccggaattcactaatattacaggaacg 121  Q
    |||||||||||||||||||||| |||||||||||||||||||||  ||||          |||||||||||||||||||||| ||||||||||||| |||    
T  28218294 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgctaatattacagggacg 28218195  T
Q  122 aaaagaggtattttccctt 140  Q
    ||||||||||||| |||||    
T  28218194 aaaagaggtatttaccctt 28218176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 1250461 - 1250580
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||         |||| ||||||||| ||||||| ||||||||||    
T  1250461 gatgaaaggagggaccaaaagtggaagaatatgaaattaaagggacaaaatctaaatcttttagtttacagagactaaaactggaattcgctaatattac 1250560  T
Q  115 aggaacgaaaagaggtattt 134  Q
    | | |||||||||| |||||    
T  1250561 aaggacgaaaagagatattt 1250580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 23704784 - 23704666
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||   ||||         |||| || |||||||||||||| ||||||||||    
T  23704784 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatgtaaatc-ttttttttacagtgagtaaaaccggaattcgctaatattac 23704686  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| ||||||||||||||||    
T  23704685 agggacgaaaagaggtattt 23704666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 20419791 - 20419911
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatc-nnnnnnnnnacagggactaaaaccggaattcactaatatta 113  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||  ||||          ||||||||||||||||||||||  ||||||||    
T  20419791 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgttaatatta 20419890  T
Q  114 caggaacgaaaagaggtattt 134  Q
    |||| || |||||||||||||    
T  20419891 cagggacaaaaagaggtattt 20419911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 20458950 - 20459069
Alignment:
Q  19 aaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacagga 118  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||  ||||         ||||| ||| |||||||||||| |||||||||||||     
T  20458950 aaaggagggaccaaaagtggaagaatctgaaattacagtgacaaaatctaaatctttttttttacaggtact-aaaccggaattccctaatattacaggg 20459048  T
Q  119 acgaaaagaggtattttccct 139  Q
    |||||||||||||||| ||||    
T  20459049 acgaaaagaggtatttaccct 20459069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 12006655 - 12006540
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||| ||||||||||||||| |||||||||||||||||||||  |||          ||||||||||||| |||||||| ||||||||||||| ||||    
T  12006655 gagggatcaaaagtggaagaatctgaaattacagggacaaaatct-aatttttttttttacagggactaaaatcggaattcgctaatattacagggacga 12006557  T
Q  123 aaagaggtattttccct 139  Q
    |||||||||||| ||||    
T  12006556 aaagaggtatttaccct 12006540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 38879839 - 38879727
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatc-nnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||          ||||| |||||||  ||||||| ||||||||||||| |||    
T  38879839 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacaggaactaaaattggaattcgctaatattacagggacg 38879740  T
Q  122 aaaagaggtattt 134  Q
    |||||||||||||    
T  38879739 aaaagaggtattt 38879727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 31851494 - 31851545
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31851494 gatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatc 31851545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 20963750 - 20963872
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||| |||||||||| |||||| ||||||||||||||| |||||  |||          |||||||||||||||||||||| ||||||||||    
T  20963750 gatgaaaggagg-accaaaagtgaaagaatctgaaattacagggactaaatctaaat-tttatttttacagggactaaaaccggaattcgctaatattac 20963847  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    ||| || ||||||||||||| ||||    
T  20963848 agggacaaaaagaggtatttaccct 20963872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 38879981 - 38880030
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38879981 tgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatc 38880030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 16995312 - 16995204
Alignment:
Q  25 gggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaaa 124  Q
    |||||||||||||||||||| |||||||||||||||||||||  |||          ||||| |||||||||| ||||| ||||||||||||  ||||||    
T  16995312 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-attttttttacaggaactaaaaccgaaattcgctaatattacagagacgaaa 16995214  T
Q  125 agaggtattt 134  Q
    ||||||||||    
T  16995213 agaggtattt 16995204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 25772478 - 25772361
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||| |||||||||||||||||||||||||| ||||||||||  ||||         ||||  ||||||| || ||||| ||||||||||||| ||||    
T  25772478 gagggaacaaaagtggaagaatatgaaattacaaggacaaaatctaaatc-ttttttttacagaaactaaaatcgaaattcgctaatattacagggacga 25772380  T
Q  123 aaagaggtattttccctta 141  Q
    |||||||||||| ||||||    
T  25772379 aaagaggtatttaccctta 25772361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 20458806 - 20458691
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||||||||||||||||| ||||||||||| |||||||||  |||          ||||||||||||||||||||||  |||||||||||| ||||    
T  20458806 gagggaccaaaagtggaagaatctgaaattacagcgacaaaatctaaat-tttttatttacagggactaaaaccggaattcgttaatattacagggacga 20458708  T
Q  123 aaagaggtattttccct 139  Q
    ||| | |||||| ||||    
T  20458707 aaaaatgtatttaccct 20458691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 23383615 - 23383503
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnn-acagggactaaaaccggaattcactaatattacaggaacg 121  Q
    ||||||| |||| |||||||||||||||||| ||||||||||||  ||||          | |||||||||||||||||||||||||||||||||  |||    
T  23383615 gagggacaaaaaatggaagaatatgaaattatagggacaaaatctaaatcttttttttttatagggactaaaaccggaattcactaatattacagagacg 23383516  T
Q  122 aaaagaggtattt 134  Q
    |||||| ||||||    
T  23383515 aaaagaagtattt 23383503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 48672333 - 48672276
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttccct 139  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  48672333 acagagactaaaaccgaaattcactaatattacagggacgaaaagaggtatttaccct 48672276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 6465977 - 6465859
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||||||| |||||||||| | ||| ||||  |||          |||||||||||||||||||||| ||||||||||    
T  6465977 gatgaaaggagggaccaaaagtggaagaatctgaaattacaagaacataatctaaat-attttttttacagggactaaaaccggaattcgctaatattac 6465879  T
Q  115 aggaacgaaaagaggtattt 134  Q
    | | ||||||| || |||||    
T  6465878 atggacgaaaaaagatattt 6465859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 7658224 - 7658339
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||||||||    |          |||| ||||||||||| |||||  |||||||||    
T  7658224 gatgaaaggagagaccaaaagtggaagaatcttaaattacagggacaaaatc----tttttttttttacagagactaaaaccgaaattcgttaatattac 7658319  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| ||||||||||||||||    
T  7658320 agggacgaaaagaggtattt 7658339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 24195059 - 24195102
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  24195059 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatc 24195102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 44816950 - 44816907
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  44816950 gagggaccaaaagtggaagaatctgaaattacagggacaaaatc 44816907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 10409637 - 10409753
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||| ||||||||||||||| | ||||||||| |||||||||  ||||         ||||||||||||| |||||||| ||||||||||| | | ||    
T  10409637 gagggatcaaaagtggaagaatctaaaattacagagacaaaatctaaatctttttttt-acagggactaaaatcggaattcgctaatattacatggatga 10409735  T
Q  123 aaagaggtattttccctt 140  Q
    |||||||||||| |||||    
T  10409736 aaagaggtatttaccctt 10409753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 20963610 - 20963498
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnn-acagggactaaaaccggaattcactaatattacaggaacg 121  Q
    |||||||||||||||||||||| | ||||||||||||| |||||  ||||          ||||||||||||||  |||||||||||||||||||| |||    
T  20963610 gagggaccaaaagtggaagaatctaaaattacagggactaaatctaaatcttttttttttacagggactaaaactagaattcactaatattacagggacg 20963511  T
Q  122 aaaagaggtattt 134  Q
    |||| || |||||    
T  20963510 aaaatagatattt 20963498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 41600073 - 41599962
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||| |||| |||||||||| |||||||||||||||||||||  |||          | | |||||||||||| ||||| ||||||||||||| | ||    
T  41600073 gagggatcaaatgtggaagaatctgaaattacagggacaaaatctaaatatttttttttatatggactaaaaccgaaattcgctaatattacagggatga 41599974  T
Q  123 aaagaggtattt 134  Q
    ||||||||||||    
T  41599973 aaagaggtattt 41599962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 7658094 - 7657973
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnn--acagggactaaaaccggaattcactaatatt 112  Q
    |||||||||| |||||||||||| |||||| |||||||||| ||||| ||||  ||||           ||||||| |||||||| ||||| ||||||||    
T  7658094 gatgaaaggatggaccaaaagtgtaagaatttgaaattacatggacataatctaaatctttttttttttacagggattaaaaccgaaattcgctaatatt 7657995  T
Q  113 acaggaacgaaaagaggtattt 134  Q
    ||| | ||||||||||||||||    
T  7657994 acatggacgaaaagaggtattt 7657973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 38880048 - 38880095
Alignment:
Q  87 gactaaaaccggaattcactaatattacaggaacgaaaagaggtattt 134  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  38880048 gactaaaaccggaatttgctaatattacagggacgaaaagaggtattt 38880095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 44817090 - 44817141
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||| ||||||||||||||| ||||||||||||||| | ||||||||||    
T  44817090 gatgaaaagagggaccaaaagtgaaagaatatgaaattataaggacaaaatc 44817141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 20419695 - 20419732
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  20419695 gagggaccaaaagtggaggaatatgaaattacagggac 20419732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 20963654 - 20963691
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  20963654 gagggaccaaaagtggaagaatatgaaattacaaggac 20963691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 24195198 - 24195246
Alignment:
Q  86 ggactaaaaccggaattcactaatattacaggaacgaaaagaggtattt 134  Q
    ||||||||| | |||||| ||||||||||||| ||||||||||||||||    
T  24195198 ggactaaaatcagaattcgctaatattacagggacgaaaagaggtattt 24195246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 48648484 - 48648535
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||||||||| |||||||||||| | ||||||||  |||||||||    
T  48648484 gatgaaaggagggaccagaagtggaagaatctaaaattacatagacaaaatc 48648535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 6466079 - 6466037
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacaggga 59  Q
    ||||| |||||||||||||||||  ||||||||||||||||||    
T  6466079 tgaaatgagggaccaaaagtggagtaatatgaaattacaggga 6466037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 31852157 - 31852203
Alignment:
Q  87 gactaaaaccggaattcactaatattacaggaacgaaaagaggtatt 133  Q
    ||||||||||| |||||  |||||||||||| |||||||||||||||    
T  31852157 gactaaaaccgaaattcgttaatattacagggacgaaaagaggtatt 31852203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 33162862 - 33162916
Alignment:
Q  86 ggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttccctt 140  Q
    |||||||||| | ||||| ||||||||||||  |||||||||||||||| |||||    
T  33162862 ggactaaaacagaaattcgctaatattacagagacgaaaagaggtatttaccctt 33162916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 23704880 - 23704843
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  23704880 gagggaccaaaagtggaggaatctgaaattacagggac 23704843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 48648416 - 48648457
Alignment:
Q  19 aaaggagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    |||||||||||||||| |||| |||| |||||||||||||||    
T  48648416 aaaggagggaccaaaattggaggaatctgaaattacagggac 48648457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 24195017 - 24194973
Alignment:
Q  16 atgaaaggagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    |||||| ||||||||||||||||| |||| |||||||| ||||||    
T  24195017 atgaaatgagggaccaaaagtggaggaatctgaaattatagggac 24194973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 31851297 - 31851245
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattt 134  Q
    ||||| ||||||| || ||||||||||||||| | | ||||||||||||||||    
T  31851297 acaggaactaaaatcgaaattcactaatattaaaaggacgaaaagaggtattt 31851245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 31851398 - 31851434
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacaggga 59  Q
    |||||||||||||||||  ||||||||||||||||||    
T  31851398 gagggaccaaaagtggagaaatatgaaattacaggga 31851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 9267090 - 9266973
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||         |||||||||||||||||||||| ||||||||||||| ||||    
T  9267090 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacga 9266991  T
Q  123 aaagaggtattttccctt 140  Q
    |||||||||||| |||||    
T  9266990 aaagaggtatttaccctt 9266973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 14262291 - 14262416
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||         |||||||||||||||||||||| ||||||||||    
T  14262291 gatgaaaggagggactaaaagtggaacaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattac 14262390  T
Q  115 aggaacgaaaagaggtattttccctt 140  Q
    ||| |||||||||||||||| |||||    
T  14262391 agggacgaaaagaggtatttaccctt 14262416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 45970038 - 45969913
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||||||||||  ||||         |||||||||||||||||||||||||||||||||    
T  45970038 gatgaaaggagagaccaaaagtgaaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcactaatattac 45969939  T
Q  115 aggaacgaaaagaggtattttccctt 140  Q
    ||| |||||||||||||||| |||||    
T  45969938 agggacgaaaagaggtatttaccctt 45969913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 14171841 - 14171965
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||||||||  ||||         |||||||||||||||||||||| ||||||||||    
T  14171841 gatgaaaggaaggaccaaaagtggaagaatcagaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattac 14171940  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    ||| |||||||||||||||| ||||    
T  14171941 agggacgaaaagaggtatttaccct 14171965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 43572512 - 43572388
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||  |||          |||||||||||||||| ||||| ||||||||||    
T  43572512 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatttttctttttacagggactaaaaccgaaattcgctaatattac 43572413  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    ||||||||||||| |||||| ||||    
T  43572412 aggaacgaaaagatgtatttaccct 43572388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 30500296 - 30500422
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||  |||          |||||||||||||| ||||||| ||||||||||    
T  30500296 gatgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaat-tttttttttacagggactaaaactggaattcgctaatattac 30500394  T
Q  115 aggaacgaaaagaggtattttcccttat 142  Q
    ||| |||||||||||||||| |||||||    
T  30500395 agggacgaaaagaggtatttacccttat 30500422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 35995793 - 35995677
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||||||||||||||||| |||||||||||||||||||||  ||           |||||||||||||||||||||| ||||||||||||||||||    
T  35995793 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaaaaaaaaattctacagggactaaaaccggaattcgctaatattacaggaacga 35995694  T
Q  123 aaagaggtattttccct 139  Q
    |||||||||||| ||||    
T  35995693 aaagaggtatttaccct 35995677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 5800728 - 5800609
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||  ||||         |||||||||||||||| |||||  |||||||||    
T  5800728 gatgaaaggagggaccaaaaatggaagaatatgaaattacagggacataatctaaatccttttttttacagggactaaaaccgaaattcgttaatattac 5800629  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| ||||||||||||||||    
T  5800628 agggacgaaaagaggtattt 5800609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 16722255 - 16722370
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaa 123  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||         |||||||||||||| | ||||| ||||||||||||| |||||    
T  16722255 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttgtacagggactaaaactgaaattcgctaatattacagggacgaa 16722354  T
Q  124 aagaggtattttccct 139  Q
    ||||||||||| ||||    
T  16722355 aagaggtatttaccct 16722370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 16722114 - 16721989
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||| ||||||||||||||||||||| |||||||||| ||||||||||  |||          |||| ||||||||||||||||| ||||||||||    
T  16722114 gatgaaagaagggaccaaaagtggaagaatctgaaattacatggacaaaatctaaatttttttttttacagtgactaaaaccggaattcgctaatattac 16722015  T
Q  115 aggaacgaaaagaggtattttccctt 140  Q
    ||| |||||||||||||||| |||||    
T  16722014 agggacgaaaagaggtatttaccctt 16721989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 33372529 - 33372405
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||  ||||         ||||| ||||||||| |||||| ||||||||||    
T  33372529 gatgaaaggagggaccaaaagtggaataatctgaaattacagggacaaaatctaaatctttttatttacaggaactaaaaccagaattcgctaatattac 33372430  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    ||| |||||||||| ||||| ||||    
T  33372429 agggacgaaaagagatatttaccct 33372405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 14161994 - 14161875
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||         | ||| |||||||| ||||||| ||||||||||    
T  14161994 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacataatctaaatctttttttttataggaactaaaactggaattcgctaatattac 14161895  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| |||||||||| |||||    
T  14161894 agggacgaaaagagatattt 14161875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 19113020 - 19113139
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||| ||||||| |||||||||||||| ||||||  ||||         ||||||||||||||||||||||  ||||||||     
T  19113020 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggataaaatctaaatctttttttttacagggactaaaaccggaattcgttaatattat 19113119  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| ||||||||||||||||    
T  19113120 agggacgaaaagaggtattt 19113139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 52552943 - 52553062
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||         ||||||||||||||  |||||| ||||||||||    
T  52552943 gatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatctttttttttacagggactaaaactagaattcgctaatattac 52553042  T
Q  115 aggaacgaaaagaggtattt 134  Q
    | | ||||||||| ||||||    
T  52553043 aaggacgaaaagatgtattt 52553062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 5800869 - 5800977
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaa 123  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||         ||||||||| |||||||||||| ||||||||||||| |||||    
T  5800869 agggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggact-aaaccggaattcgctaatattacagggacgaa 5800967  T
Q  124 aagaggtatt 133  Q
    ||||||||||    
T  5800968 aagaggtatt 5800977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 49986651 - 49986526
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnn-acagggactaaaaccggaattcactaatatta 113  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||||||||||  ||||          |||| ||||||||||||||||| |||||||||    
T  49986651 gatgaaaggagagaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttttttttttacagtgactaaaaccggaattctctaatatta 49986552  T
Q  114 caggaacgaaaagaggtattttccct 139  Q
    |||| |||||||||||||||| ||||    
T  49986551 cagggacgaaaagaggtatttaccct 49986526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 19112879 - 19112763
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnn-acagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||||||||||||||||||||||||| |||||||||||||  ||||          |||||||||||||||||||||| ||||||||||| | ||||    
T  19112879 agggaccaaaagtggaagaatatgaaattccagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgctaatattacatggacga 19112780  T
Q  123 aaagaggtattttccct 139  Q
    |||||||||||| ||||    
T  19112779 aaagaggtatttaccct 19112763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 20853951 - 20854074
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||         ||| |||||||||||| ||||| ||||||||||    
T  20853951 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttaca-ggactaaaaccgaaattcgctaatattac 20854049  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    | | |||||||||| ||||| ||||    
T  20854050 atggacgaaaagagatatttaccct 20854074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 45970183 - 45970299
Alignment:
Q  28 accaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnn-acagggactaaaaccggaattcactaatattacaggaacgaaaag 126  Q
    ||||||||||||||||| ||||||||||||||||||||   ||||          |||||||||||||||| ||||||||||||||||||| ||||||||    
T  45970183 accaaaagtggaagaatctgaaattacagggacaaaatttaaatcttttttttttacagggactaaaaccgaaattcactaatattacagggacgaaaag 45970282  T
Q  127 aggtattttcccttata 143  Q
    |||||||| ||||||||    
T  45970283 aggtatttacccttata 45970299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 11003855 - 11003729
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||||||||||  | ||         ||||||||||||||||||||||  |||||||||    
T  11003855 gatgaaaggatggaccaaaagtggaagaatctgaaattacaaggacaaaatctaagtctttttatttacagggactaaaaccggaattcggtaatattac 11003756  T
Q  115 aggaacgaaaagaggtattttccctta 141  Q
    | | || ||||||||||||| ||||||    
T  11003755 aaggacaaaaagaggtatttaccctta 11003729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 14262150 - 14262041
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaa 123  Q
    ||||||||||||||||||||| |||||||||||||||||||||  |||          ||| |||||||||||||||||| ||||||||||||| |||||    
T  14262150 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatatttttttttacaaggactaaaaccggaattcgctaatattacagggacgaa 14262051  T
Q  124 aagaggtatt 133  Q
    ||||| ||||    
T  14262050 aagagatatt 14262041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 30500155 - 30500048
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaa 123  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||          |||||||||||||||| ||||| ||||||||||||| | |||    
T  30500155 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaat--ttttttttacagggactaaaaccgaaattcgctaatattacagggatgaa 30500058  T
Q  124 aagaggtatt 133  Q
    ||||||||||    
T  30500057 aagaggtatt 30500048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 14162135 - 14162243
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaa 123  Q
    ||||||||||||||||||||| |||||||||| ||||||||||  ||||         |||||||||||||||||||||| ||||||||||||| || ||    
T  14162135 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatctctttttt-acagggactaaaaccggaattcgctaatattacagggacaaa 14162233  T
Q  124 aagaggtatt 133  Q
    ||||||||||    
T  14162234 aagaggtatt 14162243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 38 - 134
Target Start/End: Complemental strand, 19720433 - 19720337
Alignment:
Q  38 gaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattt 134  Q
    |||||||||||||||||||||||||||||  ||||         |||||||||||||||||||||| ||||||||||||| |||||||||| |||||    
T  19720433 gaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagagatattt 19720337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 45003619 - 45003500
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||  ||||         | ||||||| |||||||||||  ||||||||||    
T  45003619 gatgaaaggagggacaaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttattttatagggactgaaaccggaatttgctaatattac 45003520  T
Q  115 aggaacgaaaagaggtattt 134  Q
     || |||||||||| |||||    
T  45003519 ggggacgaaaagagatattt 45003500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 20853811 - 20853693
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatc-nnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacg 121  Q
    ||||||||||||||||||||||||||||||| ||||||||||||  ||||          ||||||  |||||||| ||||| ||||||||||||| |||    
T  20853811 gagggaccaaaagtggaagaatatgaaattatagggacaaaatctaaatcttttttttttacagggtttaaaaccgaaattcgctaatattacagggacg 20853712  T
Q  122 aaaagaggtattttccctt 140  Q
    ||||||||||||| |||||    
T  20853711 aaaagaggtatttaccctt 20853693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 9267230 - 9267353
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||| ||||||| ||| |||||||||||||||| | ||           ||||||||||||| |||||||| ||||||||||    
T  9267230 gatgaaaggagggaccaaaagtagaagaatctgatattacagggacaaaat-ctaaaaaatttatatacagggactaaaatcggaattcgctaatattac 9267328  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    | | |||||||||||||||| ||||    
T  9267329 aaggacgaaaagaggtatttaccct 9267353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 21633159 - 21633275
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||||||||||||||||| |||||||||||||||||||||  ||||         | |||||||||||| | ||||| ||||||||||||| ||||    
T  21633159 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttatagggactaaaactgaaattcgctaatattacagggacga 21633258  T
Q  123 aaagaggtattttccct 139  Q
     || |||||||| ||||    
T  21633259 gaataggtatttaccct 21633275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 15328583 - 15328467
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||| |||||||  ||| |||||||||||||||||||||||||||||||  | |          ||||||||||||| || |||| |||||||||||    
T  15328583 gatgaaaagagggacacaaactggaagaatatgaaattacagggacaaaatctaatt---tttttttacagggactaaaaacgaaatttactaatattac 15328487  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||||||||||||||||||||    
T  15328486 aggaacgaaaagaggtattt 15328467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 33372669 - 33372783
Alignment:
Q  25 gggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaaa 124  Q
    |||| ||||||||||||||| |||||||||||||||||||||  ||||         ||||| ||||||| || ||||| |||||||||| || ||||||    
T  33372669 gggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttaacaggaactaaaatcgaaattcgctaatattacggggacgaaa 33372768  T
Q  125 agaggtattttccct 139  Q
    |||||||||| ||||    
T  33372769 agaggtatttaccct 33372783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 21633019 - 21632899
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||| |||   |||         ||||||||||||     ||||| ||||||||||    
T  21633019 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagggacaacatctagatctttttttttacagggactaaa-----aattcgctaatattac 21632925  T
Q  115 aggaacgaaaagaggtattttccctt 140  Q
    ||| |||||||||||||||| |||||    
T  21632924 agggacgaaaagaggtatttaccctt 21632899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 4204829 - 4204717
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacag 116  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| ||||  ||||         ||||| |||||||| | |||||| |||||||||||    
T  4204829 tgaaatgagggaccaaaagtggaagaatctgaaattacagggacataatctaaatc-ttttttttacaggaactaaaactgaaattcattaatattacag 4204731  T
Q  117 gaacgaaaagaggt 130  Q
    | ||||||||||||    
T  4204730 ggacgaaaagaggt 4204717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 27946187 - 27946244
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttccct 139  Q
    |||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||    
T  27946187 acagggactaaaaccggaattcgctaatattactgggacgaaaagaggtatttaccct 27946244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 38283673 - 38283554
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||| ||||||||||| |||||||||||| ||| ||||||||  |||          ||| ||||||||||||||||||  |||||||||    
T  38283673 gatgaaaggagggatcaaaagtggaacaatatgaaattataggaacaaaatctaaatttttttttttacaaggactaaaaccggaattcgttaatattac 38283574  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| | |||||||| |||||    
T  38283573 agggatgaaaagagatattt 38283554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 27946165 - 27946114
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtatt 133  Q
    |||||||||||||||| ||||| ||||||||||||| |||||||||||||||    
T  27946165 acagggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatt 27946114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 35995997 - 35996055
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttccctt 140  Q
    ||||||||||||| |||||||| ||||||||||||| ||||||||| |||||| |||||    
T  35995997 acagggactaaaatcggaattcgctaatattacagggacgaaaagatgtatttaccctt 35996055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 14171701 - 14171585
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||| ||||||||||||||| |||||||||||||||||||||  ||||         ||||  | ||||| |||||||| ||||||||||||| ||||    
T  14171701 gagggatcaaaagtggaagaatttgaaattacagggacaaaatctaaatc-ttttttttacagaaattaaaatcggaattcgctaatattacagggacga 14171603  T
Q  123 aaagaggtattttccctt 140  Q
    |||| ||||||| |||||    
T  14171602 aaagtggtatttaccctt 14171585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 24490242 - 24490299
Alignment:
Q  83 cagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttccctt 140  Q
    ||||||||||||||||||||||||||||||||||| | ||||| || ||||| |||||    
T  24490242 cagggactaaaaccggaattcactaatattacagggaggaaaaaagatatttaccctt 24490299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 43572648 - 43572697
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  43572648 tgaaatgagggaccaaaagtggaagaatctgaaattacagggacagaatc 43572697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 45003759 - 45003859
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||||||||||||||||||||||||||| |||||| |||||  ||||         ||||| |||||||||| ||||| ||||||||||||| ||||    
T  45003759 gagggaccaaaagtggaagaatatgaaattatagggactaaatctaaatc-ttttttttacaggaactaaaaccgaaattcgctaatattacagggacga 45003857  T
Q  123 aa 124  Q
    ||    
T  45003858 aa 45003859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 17649269 - 17649383
Alignment:
Q  19 aaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacagga 118  Q
    ||||||| ||||||| |||||| ||| |||||||||||||||||||||  ||||          |||| |||||||||||||||| ||| |||||||||     
T  17649269 aaaggagagaccaaatgtggaataatctgaaattacagggacaaaatctaaatcttttttttc-caggaactaaaaccggaattcgctagtattacaggg 17649367  T
Q  119 acgaaaagaggtattt 134  Q
     |||||||||||||||    
T  17649368 tcgaaaagaggtattt 17649383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 15328724 - 15328766
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||||||||| ||| |||||||||||||||||||||    
T  15328724 agggaccaaaagtggaaaaatctgaaattacagggacaaaatc 15328766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 17465622 - 17465672
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaat 65  Q
    ||||||||||||||||||||||| |||||| | || |||||||||||||||    
T  17465622 gatgaaaggagggaccaaaagtgaaagaatctaaagttacagggacaaaat 17465672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 47575527 - 47575651
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||| |||||||||| ||| ||| ||||||||||| |||||||| | |||          ||||||||||||||| ||||||||| |||||||    
T  47575527 gatgaaaggagagaccaaaagttgaaaaatctgaaattacagagacaaaat-ctaatttttttttttacagggactaaaaccagaattcactcatattac 47575625  T
Q  115 aggaacgaaaagaggtattttccctt 140  Q
     |  ||||| |||||||||| |||||    
T  47575626 ggagacgaatagaggtatttaccctt 47575651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 49986791 - 49986907
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnn-acagggactaaaaccggaattcactaatattacaggaacg 121  Q
    ||||||||||||||||||||||||||||||||| | ||||||||  |||           ||||| |||||||||| ||||| |||||||||| || |||    
T  49986791 gagggaccaaaagtggaagaatatgaaattacaag-acaaaatctaaatttcttttttttacaggaactaaaaccgaaattcgctaatattactgggacg 49986889  T
Q  122 aaaagaggtattttccct 139  Q
    ||||||||||||| ||||    
T  49986890 aaaagaggtatttaccct 49986907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 52552806 - 52552764
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||| ||||||||||||||| |||||||||||||||||||||    
T  52552806 agggatcaaaagtggaagaatctgaaattacagggacaaaatc 52552764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 3424830 - 3424769
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttcccttata 143  Q
    |||||||| |||||||||| || ||||||||||||| || ||||||||||||  ||||||||    
T  3424830 acagggaccaaaaccggaaatcgctaatattacagggaccaaaagaggtattaacccttata 3424769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 35995837 - 35995878
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaa 64  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  35995837 gagggaccaaaagtggaggaacatgaaattacagggacaaaa 35995878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 3425973 - 3426021
Alignment:
Q  85 gggactaaaaccggaattcactaatattacaggaacgaaaagaggtatt 133  Q
    ||||||||||||||||||| |||||||||||||  | ||||||||||||    
T  3425973 gggactaaaaccggaattcgctaatattacaggggccaaaagaggtatt 3426021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 125
Target Start/End: Complemental strand, 32997263 - 32997220
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaa 125  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||    
T  32997263 acagggactaaaaccggaattccataatattacaggaaccaaaa 32997220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 35740930 - 35740887
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||| |||||||||||||| | |||||||||||||||||||    
T  35740930 gagggactaaaagtggaagaatttaaaattacagggacaaaatc 35740887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 35741906 - 35741957
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtatt 133  Q
    |||||||||||||| ||||||| ||||||||||||| || ||||| ||||||    
T  35741906 acagggactaaaactggaattcgctaatattacagggaccaaaagtggtatt 35741957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 35995933 - 35995972
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattac 54  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  35995933 gatgaaagaagggaccaaaagtggaagaatctgaaattac 35995972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 38283805 - 38283856
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    |||||||  ||||| ||||||||||||||| |||||||| ||||||||||||    
T  38283805 gatgaaataagggatcaaaagtggaagaatctgaaattatagggacaaaatc 38283856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 1068912 - 1068954
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaat 65  Q
    ||||||| |||||||||||||| |||||| |||||||||||||    
T  1068912 gagggactaaaagtggaagaatctgaaatgacagggacaaaat 1068954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 17465527 - 17465561
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagg 57  Q
    ||||||||||||||||| |||||||||||||||||    
T  17465527 gagggaccaaaagtggaggaatatgaaattacagg 17465561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 16722210 - 16722173
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  16722210 gagggaccaaaagtggaggaatctgaaattacagggac 16722173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 35740870 - 35740829
Alignment:
Q  85 gggactaaaaccggaattcactaatattacaggaacgaaaag 126  Q
    ||||||||||||||||||| ||||||||||||| || |||||    
T  35740870 gggactaaaaccggaattcgctaatattacagggaccaaaag 35740829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 38283769 - 38283728
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaa 64  Q
    ||||||||||||||||| |||| |||||||||| ||||||||    
T  38283769 gagggaccaaaagtggaggaatttgaaattacacggacaaaa 38283728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 47575431 - 47575472
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaa 64  Q
    |||||| |||||||||| |||| |||||||||||||||||||    
T  47575431 gagggatcaaaagtggaggaatttgaaattacagggacaaaa 47575472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 49986747 - 49986710
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  49986747 gagggaccaaaagtggaggaatctgaaattacagggac 49986710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 14262195 - 14262231
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacaggga 59  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  14262195 gagggaccaaaagtggaggaatttgaaattacaggga 14262231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 36990981 - 36991025
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaag 126  Q
    |||||||||||||||| ||||| ||||||||||||| || |||||    
T  36990981 acagggactaaaaccgaaattcgctaatattacagggaccaaaag 36991025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 37016421 - 37016465
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaag 126  Q
    |||||||||||||||| ||||| ||||||||||||| || |||||    
T  37016421 acagggactaaaaccgaaattcgctaatattacagggaccaaaag 37016465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 45003715 - 45003679
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacaggga 59  Q
    |||||| |||||||||| |||||||||||||||||||    
T  45003715 gagggatcaaaagtggaggaatatgaaattacaggga 45003679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 32017759 - 32017883
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||         |||||||||||||||||||||| ||||||||||    
T  32017759 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc-ttttttttacagggactaaaaccggaattcgctaatattac 32017857  T
Q  115 aggaacgaaaagaggtattttccctt 140  Q
    ||| |||||||||| ||||| |||||    
T  32017858 agggacgaaaagagatatttaccctt 32017883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 9481305 - 9481186
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||  ||||         |||||||||||||||||||||| ||||||||||    
T  9481305 gatgaaaggagggaccaaaattggaagaatatgaaattacagggacataatctaaatccttttttttacagggactaaaaccggaattcgctaatattac 9481206  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| ||||||||||||||||    
T  9481205 agggacgaaaagaggtattt 9481186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 19284252 - 19284133
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||         ||  |||||||||| ||||||| ||||||||||    
T  19284252 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttattttacgtggactaaaactggaattcgctaatattac 19284153  T
Q  115 aggaacgaaaagaggtattt 134  Q
    | ||||||||||||||||||    
T  19284152 atgaacgaaaagaggtattt 19284133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 18500429 - 18500312
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||         |||||||||||||||| ||||| ||||||||| ||| ||||    
T  18500429 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc-tttttcttacagggactaaaaccgaaattcgctaatattatagggacga 18500331  T
Q  123 aaagaggtattttccctta 141  Q
    |||||||||||| ||||||    
T  18500330 aaagaggtatttaccctta 18500312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 26385529 - 26385648
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||| |||||||||||||||||||||||||| |||| |||| |||  ||||         ||||||||||||| |||||||| ||||||||||    
T  26385529 gatgaaaggagagaccaaaagtggaagaatatgaaattgcaggaacaacatctaaatctttgtttttacagggactaaaatcggaattcgctaatattac 26385628  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| ||||||||||||||||    
T  26385629 agggacgaaaagaggtattt 26385648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 26385393 - 26385282
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||||         ||| ||||||||||| |||||| ||||||||||||  ||||    
T  26385393 gagggaccaaaagtggaagaatataaaattacagggacaaaatctaaatctttttttctacatggactaaaaccagaattcgctaatattacagagacga 26385294  T
Q  123 aaagaggtattt 134  Q
    ||||||||||||    
T  26385293 aaagaggtattt 26385282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 24732061 - 24731934
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnn---acagggactaaaaccggaattcactaatat 111  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||  | |             |||||||||||||||||||||| |||||||    
T  24732061 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaatttttttttttttttacagggactaaaaccggaattcgctaatat 24731962  T
Q  112 tacaggaacgaaaagaggtattttccct 139  Q
    |||||| |||||||||||||||| ||||    
T  24731961 tacagggacgaaaagaggtatttaccct 24731934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 24732201 - 24732317
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  ||||         ||||||||| |||  ||||||| ||||||||||||| ||||    
T  24732201 gagggaccaaaagtggaagaatatgaaattacatggacaaaatctaaatctttttttttacagggact-aaattggaattcgctaatattacagggacga 24732299  T
Q  123 aaagaggtattttccctt 140  Q
    |||||||||||| |||||    
T  24732300 aaagaggtatttaccctt 24732317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 30618081 - 30617965
Alignment:
Q  19 aaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacagga 118  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||  |||            | ||||||||| | ||||||||||||||||||||     
T  30618081 aaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaattttttta-----aaggactaaaatcagaattcactaatattacaggg 30617987  T
Q  119 acgaaaagaggtattttccctt 140  Q
    |||||||||||||||| |||||    
T  30617986 acgaaaagaggtatttaccctt 30617965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 2299635 - 2299692
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttccct 139  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  2299635 acaggaactaaaaccggaattcgctaatattacaggaacgaaaagagatatttaccct 2299692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 9854144 - 9854193
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  9854144 tgaaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatc 9854193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 10321788 - 10321736
Alignment:
Q  83 cagggactaaaaccggaattcactaatattacaggaacgaaaagaggtatttt 135  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||| |||||||    
T  10321788 cagggactaaaaccggaattcgctaatattacagggacgaaaagaagtatttt 10321736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 2299564 - 2299615
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||||||||    
T  2299564 gatgaaaggagggataaaaagtggaagaatctgaaattacagggacaaaatc 2299615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 9154990 - 9154884
Alignment:
Q  28 accaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcact-aatattacaggaacgaaaag 126  Q
    ||||||| ||||||||| |||||||||||||||||||||  ||||         ||||||||||||| |||||||| || ||||||||||| | ||||||    
T  9154990 accaaaactggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcggaattcgctaaatattacagggaggaaaag 9154891  T
Q  127 aggtatt 133  Q
    |||||||    
T  9154890 aggtatt 9154884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 33714602 - 33714559
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  33714602 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatc 33714559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 18500655 - 18500708
Alignment:
Q  86 ggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttccct 139  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||||||| ||||    
T  18500655 ggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttaccct 18500708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 9481446 - 9481488
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  9481446 agggaccaaaagtggaagaatctgaaattacaaggacaaaatc 9481488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 10321986 - 10322032
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggaca 61  Q
    |||||||||| |||||||||||| |||||| ||||||||||||||||    
T  10321986 gatgaaaggaaggaccaaaagtgaaagaatctgaaattacagggaca 10322032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 134
Target Start/End: Complemental strand, 30458950 - 30458904
Alignment:
Q  88 actaaaaccggaattcactaatattacaggaacgaaaagaggtattt 134  Q
    |||||||||| ||||||||||||||||||| ||||||||| ||||||    
T  30458950 actaaaaccgaaattcactaatattacagggacgaaaagatgtattt 30458904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 33637681 - 33637631
Alignment:
Q  16 atgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||||||||||||||||||||| | |||||||| | ||||||||    
T  33637681 atgaaaggagggaccaaaagtggaagaatctaaaattacaagaacaaaatc 33637631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 14681003 - 14680954
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||| || ||||||||||||||||||||||||||||||  |||||||||    
T  14681003 tgaaatgaaggaccaaaagtggaagaatatgaaattacaaagacaaaatc 14680954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 17142798 - 17142749
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||| ||| |||||||||||||||||| |||||||||||||||| ||||    
T  17142798 tgaaacgagagaccaaaagtggaagaatttgaaattacagggacataatc 17142749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 33637791 - 33637831
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaa 63  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  33637791 gagggatcaaaagtgaaagaatatgaaattacagggacaaa 33637831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 34884613 - 34884561
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattt 134  Q
    ||||||| |||||||| ||||||||||||||||| | |||||||||| |||||    
T  34884613 acagggattaaaaccgaaattcactaatattacaaggacgaaaagagatattt 34884561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 18500602 - 18500641
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattac 54  Q
    |||||||||||||||||||||||||||||| | |||||||    
T  18500602 gatgaaaggagggaccaaaagtggaagaatctaaaattac 18500641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 30459156 - 30459267
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||| ||||||||||| |||||| ||||||||||  |||| ||||  ||||         || | || |||||||| ||||| ||||||||||    
T  30459156 gatgaaaggagagaccaaaagtgaaagaatctgaaattacaatgacataatc--aatctttttttttacggagattaaaaccgaaattcgctaatattac 30459253  T
Q  115 aggaacgaaaagag 128  Q
    ||||||||||||||    
T  30459254 aggaacgaaaagag 30459267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 10321851 - 10321809
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacaggga 59  Q
    ||||| |||||| |||||||| |||||||||||||||||||||    
T  10321851 tgaaatgagggagcaaaagtgtaagaatatgaaattacaggga 10321809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 115
Target Start/End: Complemental strand, 2299396 - 2299363
Alignment:
Q  82 acagggactaaaaccggaattcactaatattaca 115  Q
    |||||||||||||||||||||| |||||||||||    
T  2299396 acagggactaaaaccggaattcgctaatattaca 2299363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 3230022 - 3230059
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  3230022 gagggaccaaaagtggaggaatatgaaattacaaggac 3230059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 26385437 - 26385474
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  26385437 gagggaccaaaagtggaggaatctgaaattacagggac 26385474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 17142798 - 17142834
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggac 60  Q
    |||||||||||||||| |||| |||||||||||||||    
T  17142798 agggaccaaaagtggaggaatctgaaattacagggac 17142834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 32017695 - 32017731
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacaggga 59  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  32017695 gagggaccaaaagtggaggaatttgaaattacaggga 32017731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 33714541 - 33714494
Alignment:
Q  82 acagggacta--aaaccggaattcactaatattacaggaacgaaaaga 127  Q
    ||||||||||  |||||||||||| ||||||||||||| |||||||||    
T  33714541 acagggactataaaaccggaattcgctaatattacagggacgaaaaga 33714494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 4e-31; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 38574223 - 38574342
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||         ||||||||||||||| |||||| ||||||||||    
T  38574223 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccagaattcgctaatattac 38574322  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| ||||||| ||||||||    
T  38574323 agggacgaaaaaaggtattt 38574342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 3018135 - 3018015
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatc-nnnnnnnnnacagggactaaaaccggaattcactaatatta 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||          || ||||||||||||||||||| |||||||||    
T  3018135 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttaccgggactaaaaccggaattcgctaatatta 3018036  T
Q  114 caggaacgaaaagaggtattt 134  Q
    |||| ||||||||||||||||    
T  3018035 cagggacgaaaagaggtattt 3018015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 9619103 - 9618984
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||         |||||||||||||||||||||| ||||||||||    
T  9619103 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttgtttttacagggactaaaaccggaattcgctaatattac 9619004  T
Q  115 aggaacgaaaagaggtattt 134  Q
    | | ||||||| ||||||||    
T  9619003 atggacgaaaataggtattt 9618984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 46046679 - 46046804
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||  ||||         |||||||||||||||||||||| ||||||||||    
T  46046679 gatgaaaggagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattac 46046778  T
Q  115 aggaacgaaaagaggtattttccctta 141  Q
    ||| ||||||| |||||||| ||||||    
T  46046779 agggacgaaaa-aggtatttaccctta 46046804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 37012962 - 37013088
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||          ||||||||||||||| |||||| ||||||||||    
T  37012962 gatgaaaggagtgaccaaaagtggaagaatatgaaattacagggacaaaat-ctaatttttttttatacagggactaaaaccagaattcgctaatattac 37013060  T
Q  115 aggaacgaaaagaggtattttcccttat 142  Q
    ||| |||||| ||||||||| |||||||    
T  37013061 agggacgaaatgaggtatttacccttat 37013088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 15640838 - 15640724
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||         ||||| |||||||||||||||| ||||||||||    
T  15640838 gatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacaaaatctaaatc-ttttttttacaggaactaaaaccggaattcgctaatattac 15640740  T
Q  115 aggaacgaaaagaggt 130  Q
    ||| ||||||||||||    
T  15640739 agggacgaaaagaggt 15640724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 9516725 - 9516614
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  ||||         ||| |||||||||||||||||| ||||||||||||| ||||    
T  9516725 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacaaggactaaaaccggaattcgctaatattacagggacga 9516626  T
Q  123 aaagaggtattt 134  Q
    |||||| |||||    
T  9516625 aaagagatattt 9516614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 9516865 - 9516984
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||  ||||         |||| ||||||||||| ||||| ||||||||||    
T  9516865 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatctttttttttacagagactaaaaccgaaattcgctaatattac 9516964  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| |||||||||| |||||    
T  9516965 agggacgaaaagagatattt 9516984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 9619245 - 9619360
Alignment:
Q  26 ggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaaaa 125  Q
    |||||||||||||||||||||||||||||| ||||||||||  ||||         ||||||||||||||| |||||| ||||||||||||| || ||||    
T  9619245 ggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttctacagggactaaaaccagaattcgctaatattacagggacaaaaa 9619344  T
Q  126 gaggtattttccctta 141  Q
    ||||||||| ||||||    
T  9619345 gaggtatttaccctta 9619360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 38574083 - 38573968
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||         ||||||| ||||| |||||||||||||||||||| | ||||    
T  38574083 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc-ttttttttacagggattaaaatcggaattcactaatattacatggacga 38573985  T
Q  123 aaagaggtattttccct 139  Q
    |||||||||||| ||||    
T  38573984 aaagaggtatttaccct 38573968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 31944073 - 31943959
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatc-nnnnnnnnnacagggactaaaaccggaattcactaatatta 113  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||          ||||| |||||||||||||||| |||||||||    
T  31944073 gatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttatttacaggaactaaaaccggaattcgctaatatta 31943974  T
Q  114 caggaacgaaaagag 128  Q
    |||| ||||||||||    
T  31943973 cagggacgaaaagag 31943959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 48580121 - 48580239
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||         |   ||| |||||||||||||| ||||||||||    
T  48580121 gatgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaatcgttttttttatcaggattaaaaccggaattcgctaatattac 48580220  T
Q  115 aggaacgaaaagaggtatt 133  Q
    ||| |||||||||||||||    
T  48580221 agggacgaaaagaggtatt 48580239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 25 - 134
Target Start/End: Original strand, 26252502 - 26252611
Alignment:
Q  25 gggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaaa 124  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||         ||||| |||||||| ||||||| ||||||||||||| ||||||    
T  26252502 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaggaactaaaactggaattcgctaatattacagggacgaaa 26252601  T
Q  125 agaggtattt 134  Q
    |||| |||||    
T  26252602 agagatattt 26252611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 9396822 - 9396703
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||||  ||||         |||| |||||||| || ||||| ||||||||||    
T  9396822 gatgaaaggagggaccaaaagtggaaaaatttgaaattatagggacaaaatctaaatcttttttttaacagagactaaaatcgaaattcgctaatattac 9396723  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| ||||||||||||||||    
T  9396722 agggacgaaaagaggtattt 9396703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 31090316 - 31090443
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||  | |          ||||||||||||| || ||||| ||||||||||    
T  31090316 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaattttttttttttacagggactaaaatcgaaattcgctaatattac 31090415  T
Q  115 aggaacgaaaagaggtattttcccttat 142  Q
    ||| |||||||||| ||||| |||||||    
T  31090416 agggacgaaaagagatatttacccttat 31090443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 3273745 - 3273694
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3273745 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 3273694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 41947020 - 41946954
Alignment:
Q  83 cagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttcccttatactttta 149  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| || |||||    
T  41947020 cagggactaaaaccggaattcactaatattacagggacgaaaagaggtatttacccttttattttta 41946954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 31090176 - 31090064
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatc-nnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||          ||||||||||||| || ||||||||||||||||||| ||     
T  31090176 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacagggactaaaatcgaaattcactaatattacagggaca 31090077  T
Q  122 aaaagaggtattt 134  Q
    |||||| ||||||    
T  31090076 aaaagaagtattt 31090064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 34064097 - 34063986
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||||||||||||||||| ||||||||||| |||||||||  ||||         ||||||||||||||  ||||||  |||||||||||| ||||    
T  34064097 gagggaccaaaagtggaagaatctgaaattacagagacaaaatctaaatctttttttttacagggactaaaactagaattcgttaatattacagggacga 34063998  T
Q  123 aaagaggtattt 134  Q
    ||||||||||||    
T  34063997 aaagaggtattt 34063986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 26252391 - 26252340
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26252391 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatc 26252340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 35376285 - 35376167
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||| |||||||||||||||||| | ||||||||| |||||||||  ||||         ||||||||||||||| |||||| ||||||||||    
T  35376285 gatgaaaggagagaccaaaagtggaagaatctaaaattacagagacaaaatctaaatctttttttt-acagggactaaaaccagaattcgctaatattac 35376187  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| ||||||| ||||||||    
T  35376186 agggacgaaaataggtattt 35376167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 9396968 - 9397077
Alignment:
Q  29 ccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaaaagag 128  Q
    |||||||||||||||| |||||||||||||||||||||  ||||         |||||||||||||||||||||  ||||||||||||| |||||||||     
T  9396968 ccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttt-acagggactaaaaccggaatttgctaatattacagggacgaaaagaa 9397066  T
Q  129 gtattttccct 139  Q
    |||||| ||||    
T  9397067 gtatttaccct 9397077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 31218303 - 31218360
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttccct 139  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  31218303 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccct 31218360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 7819137 - 7819019
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||  ||||         |||  ||||||||||||||||| |||||||||     
T  7819137 gatgaaaggaggaaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttaca-tgactaaaaccggaattcgctaatattat 7819039  T
Q  115 aggaacgaaaagaggtattt 134  Q
    | |  |||||||||||||||    
T  7819038 atggtcgaaaagaggtattt 7819019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 13132196 - 13132318
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||  ||||         ||| ||||||||| || ||||| ||||||||||    
T  13132196 gatgaaagaagggaccaaaagtggaagaatatgaaattacagggacagaatctaaatc-ttttttttaca-ggactaaaatcgaaattcgctaatattac 13132293  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    ||| ||||||| |||||||| ||||    
T  13132294 agggacgaaaataggtatttaccct 13132318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 15640972 - 15641090
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnn-acagggactaaaaccggaattcactaatattaca 115  Q
    ||||| |||| ||||||||||||||||| |||||||||||||||| ||||  ||||          ||||| | ||||||||||||||||||||||||||    
T  15640972 tgaaatgaggaaccaaaagtggaagaatctgaaattacagggacataatctaaatcttttttttttacaggaattaaaaccggaattcactaatattaca 15641071  T
Q  116 ggaacgaaaagaggtattt 134  Q
     | ||||||||||||||||    
T  15641072 aggacgaaaagaggtattt 15641090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 18713083 - 18713032
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  18713083 gatgaaaggagggaccaaaattggaacaatatgaaattacagggacaaaatc 18713032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 46046539 - 46046429
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||| |||||||||||||||||||||||||||||||||      ||||         ||||||||||||| |||||||| ||||||||||||| ||||    
T  46046539 gagggatcaaaagtggaagaatatgaaattacagggacaa------aatctatttttttacagggactaaaatcggaattcgctaatattacagggacga 46046446  T
Q  123 aaagaggtattttccct 139  Q
    ||| |||||||| ||||    
T  46046445 aaaaaggtatttaccct 46046429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 48259938 - 48259821
Alignment:
Q  24 agggaccaaaagt-ggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||||||||| ||| |||| |||||||||| ||||||||||  ||||         ||||||| |||||||||||||| ||||||||||||| ||||    
T  48259938 agggaccaaaagtaggaggaatctgaaattacatggacaaaatctaaatctttttatttacagggattaaaaccggaattcgctaatattacagggacga 48259839  T
Q  123 aaagaggtattttccctt 140  Q
    |||||| ||||| |||||    
T  48259838 aaagagatatttaccctt 48259821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 34064237 - 34064288
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    |||||||| ||||||||||||||||||||| ||||||||||| |||||||||    
T  34064237 gatgaaagaagggaccaaaagtggaagaatctgaaattacagagacaaaatc 34064288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 134
Target Start/End: Original strand, 35376391 - 35376501
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||||||||||||||| | ||||||||||||||||||||   ||||         |||||||||||||| ||||||  ||||||||||||| ||||    
T  35376391 gagggaccaaaagtggaagattctgaaattacagggacaaaatttaaatc-ttttttttacagggactaaaactggaatttgctaatattacagggacga 35376489  T
Q  123 aaagaggtattt 134  Q
    |||||| |||||    
T  35376490 aaagagatattt 35376501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 4356004 - 4355887
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||| ||||||||||||||| |||||||||||||||||  |||||||||  || |         ||||| |||||||||||||||| |||||||||     
T  4356004 gatgaaatgagggaccaaaagtgaaagaatatgaaattacatagacaaaatctaaagc-ttgtttttacaggaactaaaaccggaattcgctaatattat 4355906  T
Q  115 aggaacgaaaagaggtatt 133  Q
    | |||| ||||||||||||    
T  4355905 atgaacaaaaagaggtatt 4355887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 31944213 - 31944330
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||  | |          |||| ||||||||||| ||||| ||||||||||| | ||||    
T  31944213 gagggacaaaaagtggaagaatatgaaattacatggacaaaatctaattatttttttttacagagactaaaaccgaaattcgctaatattacaaggacga 31944312  T
Q  123 aaagaggtattttccctt 140  Q
    ||||| |||||| |||||    
T  31944313 aaagaagtatttaccctt 31944330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 37012821 - 37012779
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  37012821 agggaccaaaagtggaagaatctgaaattacagggacaaaatc 37012779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 41947112 - 41947162
Alignment:
Q  16 atgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||||||||    
T  41947112 atgaaagcagggaccaaaagtggaaaaatatgaaattacaaggacaaaatc 41947162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 3273877 - 3273992
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacag 116  Q
    ||||| |||||| ||||||||||||||| |||||||||||||| ||||||  ||||         | |||||||||||||| ||||| |||||||||| |    
T  3273877 tgaaatgagggatcaaaagtggaagaatctgaaattacagggataaaatctaaatc-ttttttttatagggactaaaaccgaaattcgctaatattac-g 3273974  T
Q  117 gaacgaaaagaggtattt 134  Q
    | ||||||||||||||||    
T  3273975 ggacgaaaagaggtattt 3273992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 7819277 - 7819320
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    |||||||||||||||||||||| ||| |||||||||||||||||    
T  7819277 gagggaccaaaagtggaagaatctgacattacagggacaaaatc 7819320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 139
Target Start/End: Complemental strand, 3273674 - 3273620
Alignment:
Q  85 gggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttccct 139  Q
    |||||||||| |||||||| ||||||||||||| |||||||||| ||||| ||||    
T  3273674 gggactaaaatcggaattcgctaatattacagggacgaaaagagatatttaccct 3273620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 4356145 - 4356187
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  4356145 agggaccaaaagtggaagaatttgaaattacagagacaaaatc 4356187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 18667412 - 18667375
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaatt 52  Q
    |||||||||||||||||||||||||| |||||||||||    
T  18667412 gatgaaaggagggaccaaaagtggaacaatatgaaatt 18667375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 9396918 - 9396882
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacaggga 59  Q
    ||||||||||||||||| |||||||||||||||||||    
T  9396918 gagggaccaaaagtggaggaatatgaaattacaggga 9396882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 41947180 - 41947228
Alignment:
Q  86 ggactaaaaccggaattcactaatattacaggaacgaaaagaggtattt 134  Q
    |||||||||||| ||||| ||||||||||||| |||||||||| |||||    
T  41947180 ggactaaaaccgaaattcgctaatattacagggacgaaaagagatattt 41947228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 48260021 - 48260057
Alignment:
Q  30 caaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||||||| |||||||||||||||||||||    
T  48260021 caaaagtggaagaatttgaaattacagggacaaaatc 48260057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 3018332 - 3018383
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtatt 133  Q
    |||||||||||||||| |||||  |||||||||||| |||||||||| ||||    
T  3018332 acagggactaaaaccgaaattcgttaatattacagggacgaaaagagatatt 3018383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 141
Target Start/End: Complemental strand, 12904803 - 12904744
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttccctta 141  Q
    |||||||||||||||  ||||| ||||||||| ||| |||||||||| ||||| ||||||    
T  12904803 acagggactaaaaccaaaattcgctaatattatagggacgaaaagagatatttaccctta 12904744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 133
Target Start/End: Original strand, 18667620 - 18667663
Alignment:
Q  90 taaaaccggaattcactaatattacaggaacgaaaagaggtatt 133  Q
    |||||| ||||||| ||||||||||||| |||||||||||||||    
T  18667620 taaaactggaattcgctaatattacagggacgaaaagaggtatt 18667663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 36887736 - 36887685
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtatt 133  Q
    |||||||||||||||  ||||| ||||||||||||| || ||||||||||||    
T  36887736 acagggactaaaaccaaaattcgctaatattacagggaccaaaagaggtatt 36887685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 18713224 - 18713266
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||    
T  18713224 agggaccaaaactggaagaatctgaaattacagagacaaaatc 18713266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 7819233 - 7819196
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  7819233 gagggaccaaaagtggaggaatatgaaattacatggac 7819196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 9516769 - 9516806
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  9516769 gagggaccaaaagtggaggaatctgaaattacagggac 9516806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 38574127 - 38574160
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacag 56  Q
    ||||||||||||||||| ||||||||||||||||    
T  38574127 gagggaccaaaagtggaggaatatgaaattacag 38574160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 13131996 - 13131944
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattt 134  Q
    |||||||||||||| | |||||  |||||||||| | ||||||||||||||||    
T  13131996 acagggactaaaacagaaattcgttaatattacaaggacgaaaagaggtattt 13131944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 4907077 - 4906959
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||         ||||||||||||||  |||||||||||||||||||| ||||    
T  4907077 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcattttttttacagggactaaaactagaattcactaatattacagggacga 4906978  T
Q  123 aaagaggtattttccctta 141  Q
    |||||||||||| ||||||    
T  4906977 aaagaggtatttaccctta 4906959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 18462408 - 18462284
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||  ||||         |||||||||||||||||||||| ||||||||||    
T  18462408 gatgaaaggagggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatctttttttt-acagggactaaaaccggaattcgctaatattac 18462310  T
Q  115 aggaacgaaaagaggtattttccctt 140  Q
    ||| |||||||||||||||| |||||    
T  18462309 agggacgaaaagaggtatttaccctt 18462284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 39711335 - 39711452
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||||||||||||||||||||||||||| |||||||||||  ||||         ||||||||||||||| |||||| ||||||||||||| ||||    
T  39711335 gagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatctttttttttacagggactaaaaccagaattcgctaatattacagggacga 39711434  T
Q  123 aaagaggtattttccctt 140  Q
    |||||||||||| |||||    
T  39711435 aaagaggtatttaccctt 39711452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 52058263 - 52058390
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||  ||||         ||||| |||||||||  ||||| ||||||||||    
T  52058263 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacataatctaaatctttttttctacaggaactaaaaccaaaattcgctaatattac 52058362  T
Q  115 aggaacgaaaagaggtattttcccttat 142  Q
    ||| |||||||||||||||| |||||||    
T  52058363 agggacgaaaagaggtatttacccttat 52058390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 24467751 - 24467627
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||         |||||||||||||  ||||||| ||||||||||    
T  24467751 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc-ttttttttacagggactaaaattggaattcgctaatattac 24467653  T
Q  115 aggaacgaaaagaggtattttccctt 140  Q
    ||| ||||||||| |||||| |||||    
T  24467652 agggacgaaaagatgtatttaccctt 24467627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 4907217 - 4907336
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||         |||||||||||||| ||||||| ||||||||||    
T  4907217 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttattttacagggactaaaactggaattcgctaatattac 4907316  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| | ||||| || |||||    
T  4907317 agggaggaaaatagatattt 4907336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 24467884 - 24467998
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacag 116  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||  ||||         ||||||||||||||||||||||||||||||||||     
T  24467884 tgaaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcactaatattacat 24467983  T
Q  117 gaacgaaaagaggtattt 134  Q
    |   ||||||||||||||    
T  24467984 g---gaaaagaggtattt 24467998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 30299354 - 30299228
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||         ||| ||||||||| || | ||| ||||||||||    
T  30299354 gatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttaca-ggactaaaatcgaagttcgctaatattac 30299256  T
Q  115 aggaacgaaaagaggtattttcccttat 142  Q
    ||| |||||||||||||||| |||||||    
T  30299255 agggacgaaaagaggtatttacccttat 30299228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 33628949 - 33629063
Alignment:
Q  19 aaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacagga 118  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||  | |          |||||||||||||||||||||| |||||||||||||     
T  33628949 aaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatcaaattttttttttttacagggactaaaaccggaattcgctaatattacaggg 33629048  T
Q  119 acgaaaagaggtatt 133  Q
    || ||||||||||||    
T  33629049 acaaaaagaggtatt 33629063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 39711191 - 39711078
Alignment:
Q  19 aaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacagga 118  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||  ||||         |||||||||||||||||||||| ||||||||||| |     
T  39711191 aaaggagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc-ttttttttacagggactaaaaccggaattcgctaatattacaag- 39711094  T
Q  119 acgaaaagaggtattt 134  Q
    ||||||||||||||||    
T  39711093 acgaaaagaggtattt 39711078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 48072084 - 48071966
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||  ||||         ||||| ||||||||| |||||| ||||||||||    
T  48072084 gatgaaaggagggagcaaaagtggaataatatgaaattacagggacaaaatctaaatcttttttattacaggaactaaaaccagaattcgctaatattac 48071985  T
Q  115 aggaacgaaaagaggtatt 133  Q
    | |||||||||||| ||||    
T  48071984 atgaacgaaaagagatatt 48071966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 17606572 - 17606679
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaa 123  Q
    ||||||||||||||||||||| |||||||||| ||||||||||  ||||         |||||||||||||||||||||| ||||||||||||| |||||    
T  17606572 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatcttttttt--acagggactaaaaccggaattcgctaatattacagggacgaa 17606669  T
Q  124 aagaggtatt 133  Q
    ||||||||||    
T  17606670 aagaggtatt 17606679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 39826312 - 39826420
Alignment:
Q  26 ggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaaaa 125  Q
    ||||||||||||||||||| |||||||||||||||||||||  ||||         |||||||||||||||| ||||| ||||||||||| | |||||||    
T  39826312 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccgaaattcgctaatattacatggacgaaaa 39826411  T
Q  126 gaggtattt 134  Q
    |||||||||    
T  39826412 gaggtattt 39826420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 8292927 - 8292808
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||| |||| ||||||||||||||||||||||||| |||||||||||||  ||||         ||||||||||||||||| |||| |||||| |||    
T  8292927 gatgaaaagaggaaccaaaagtggaagaatatgaaatttcagggacaaaatctaaatcttttattttacagggactaaaaccgggattcgctaatagtac 8292828  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| |||||||||| |||||    
T  8292827 agggacgaaaagagttattt 8292808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 29696687 - 29696564
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||||||  ||||         |||| ||||||||||| ||||| ||||||||||    
T  29696687 gatgaaaggagtgacaaaaagtggaagaatatgaaattacggggacaaaatctaaatc-ttttttttacagagactaaaaccgaaattcgctaatattac 29696589  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    ||| |||||||||||||||| ||||    
T  29696588 agggacgaaaagaggtatttaccct 29696564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 17606431 - 17606308
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatc----nnnnnnnnnacagggactaaaaccggaattcactaata 110  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||  ||||             ||||||||||||| |||||||| ||||||    
T  17606431 gatgaaatgagggaccaaaagtggaagaatatgaaattacaggaacaaaatctaaatctttttttttttttacagggactaaaatcggaattcgctaata 17606332  T
Q  111 ttacaggaacgaaaagaggtattt 134  Q
    ||||||| ||||||||||||||||    
T  17606331 ttacagggacgaaaagaggtattt 17606308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 33628805 - 33628689
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||||||||||| |||||| ||||||||| |||||||||||  ||||         || |||||||||||| |||||| ||||||||||||| ||||    
T  33628805 gagggaccaaaagtgaaagaatctgaaattacggggacaaaatctaaatctttttttttacggggactaaaaccagaattcgctaatattacagggacga 33628706  T
Q  123 aaagaggtattttccct 139  Q
    |||||||||||| ||||    
T  33628705 aaagaggtatttaccct 33628689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 8293070 - 8293189
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatc-nnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||          ||||||||||||||  ||||||  |||||||| ||| |||    
T  8293070 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacagggactaaaactagaattcgttaatattatagggacg 8293169  T
Q  122 aaaagaggtattttccctta 141  Q
    ||||||||||||| ||||||    
T  8293170 aaaagaggtatttaccctta 8293189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 142
Target Start/End: Original strand, 29696821 - 29696939
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||||||||||||||||| |||||||||| ||||||||||  |||          |||| ||||||||||||||||| |||||||||||  |||||    
T  29696821 gagggaccaaaagtggaagaatctgaaattacatggacaaaatct-aatttttttttttacagtgactaaaaccggaattcgctaatattacataaacga 29696919  T
Q  123 aaagaggtattttcccttat 142  Q
    |||||||||||| |||||||    
T  29696920 aaagaggtatttacccttat 29696939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 48072230 - 48072340
Alignment:
Q  29 ccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaaaagag 128  Q
    ||||||||||||||||||||||||||||||||| ||||  |||          ||| ||||||||||||||||||||||||||||||   ||||||||||    
T  48072230 ccaaaagtggaagaatatgaaattacagggacataatctaaatatttttttttacaaggactaaaaccggaattcactaatattacaatgacgaaaagag 48072329  T
Q  129 gtattttccct 139  Q
    |||||| ||||    
T  48072330 gtatttaccct 48072340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 39826165 - 39826048
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||| ||||||||||||||| |||||||||||||||||||||  ||||         ||||||||||||| || ||||| ||||||||| | | ||||    
T  39826165 gagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcgaaattcgctaatattatatggacga 39826066  T
Q  123 aaagaggtattttccctt 140  Q
    |||||||||||| |||||    
T  39826065 aaagaggtatttaccctt 39826048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 18462541 - 18462664
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacag 116  Q
    ||||| ||| |||||||||||||||||| ||||||||| |||||||||||  ||||         ||| | |||||||||||||||  ||||||||||||    
T  18462541 tgaaatgagagaccaaaagtggaagaatctgaaattacggggacaaaatctaaatctttttttatacaagaactaaaaccggaatttgctaatattacag 18462640  T
Q  117 gaacgaaaagaggtattttccctt 140  Q
    | | |||||||||||||| |||||    
T  18462641 ggaggaaaagaggtatttgccctt 18462664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 43539470 - 43539419
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  43539470 gatgaaaggagggaccaaaagtggaacaatataaaattacagggacaaaatc 43539419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 52058132 - 52058006
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacag 116  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| | ||  ||||         ||||  ||||||||||||||||  ||||||||||     
T  52058132 tgaaatgagggaccaaaagtggaagaatctgaaattacagggacatagtctaaatctttttttttacagaaactaaaaccggaattcgttaatattacaa 52058033  T
Q  117 gaacgaaaagaggtattttcccttata 143  Q
    | |||||||||||||||| ||| ||||    
T  52058032 ggacgaaaagaggtatttacccatata 52058006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 34749252 - 34749135
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||||||||||||||||||||||||||| |||||||||||  ||||         | ||||||||||| | |||||| ||||||||||||| | ||    
T  34749252 gagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatc-ttttttttatagggactaaaatcagaattcgctaatattacagggatga 34749154  T
Q  123 aaagaggtattttccctta 141  Q
    ||||| |||||| ||||||    
T  34749153 aaagatgtatttaccctta 34749135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 39970900 - 39971020
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatc-nnnnnnnnnacagggactaaaaccggaattcactaatatta 113  Q
    |||||||| |||||||||||||||||| || | |||||||||||||||||||  ||||          |||||||||||||||| |||||  ||||||||    
T  39970900 gatgaaagaagggaccaaaagtggaaggatctaaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccgaaattcgttaatatta 39970999  T
Q  114 caggaacgaaaagaggtattt 134  Q
    || | ||||||||||||||||    
T  39971000 catggacgaaaagaggtattt 39971020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 42510135 - 42510086
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  42510135 tgaaatgagggactaaaagtggaagaatatgaaattacagggacaaaatc 42510086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 134
Target Start/End: Original strand, 30299494 - 30299605
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||||||||||||||||| | |||||||||||||||||||  ||||         ||||| |||||||||| ||||  ||||||||||||  ||||    
T  30299494 gagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatctttttttttacaggaactaaaaccgaaatttgctaatattacagagacga 30299593  T
Q  123 aaagaggtattt 134  Q
    ||| ||||||||    
T  30299594 aaataggtattt 30299605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 34749364 - 34749479
Alignment:
Q  19 aaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacagga 118  Q
    |||||||| ||||||||||||||||| |||||||||||||| ||||||  ||||         ||| ||||||||| ||||||||  |||||||||||      
T  34749364 aaaggaggtaccaaaagtggaagaatctgaaattacagggataaaatctaaatctttttttttacaaggactaaaatcggaattcgataatattacagag 34749463  T
Q  119 acgaaaagaggtattt 134  Q
    || |||||||||||||    
T  34749464 acaaaaagaggtattt 34749479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 20995932 - 20995974
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  20995932 agggaccaaaagtggaagaatatgaaattacagagacaaaatc 20995974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 7473913 - 7473864
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||| |||||||||||||||||||||||||||||||||| |||| ||||    
T  7473913 tgaaatgagggaccaaaagtggaagaatatgaaattacagagacataatc 7473864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 20995754 - 20995697
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttccct 139  Q
    |||||||||||||||||||||| ||||||||||||  | |||||||||||||| ||||    
T  20995754 acagggactaaaaccggaattcgctaatattacagagatgaaaagaggtatttaccct 20995697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 18342339 - 18342391
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattt 134  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||| ||||||||    
T  18342339 acagggactaaaaccgaaattcgctaatattacagggacgaaaaaaggtattt 18342391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 30252161 - 30252279
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaac-- 120  Q
    |||||| ||||| ||||||||||||||||||| |||||||||||  ||||         ||||||||||||||| |||||| ||||||||| ||| ||      
T  30252161 gagggatcaaaaatggaagaatatgaaattacggggacaaaatctaaatctttatttttacagggactaaaaccagaattcgctaatattatagggacaa 30252260  T
Q  121 gaaaagaggtattttccct 139  Q
    | |||||||||||| ||||    
T  30252261 ggaaagaggtatttaccct 30252279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 13229855 - 13229804
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||| || |||||||||||||||||||||||||| | ||||||||    
T  13229855 gatgaaaggagtgatcaaaagtggaagaatatgaaattacaagcacaaaatc 13229804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 16294211 - 16294253
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    |||||||||||||||| ||||||||||||||| ||||||||||    
T  16294211 agggaccaaaagtggaggaatatgaaattacaaggacaaaatc 16294253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 20995792 - 20995747
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    |||||||| |||||||||||||| |||||||| |||||||||||||    
T  20995792 gatgaaagaagggaccaaaagtgaaagaatataaaattacagggac 20995747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 27039690 - 27039643
Alignment:
Q  86 ggactaaaaccggaattcactaatattacaggaacgaaaagaggtatt 133  Q
    |||| ||||||||||||| || |||||||||| |||||||||||||||    
T  27039690 ggaccaaaaccggaattcgctcatattacagggacgaaaagaggtatt 27039643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 39970761 - 39970718
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    |||||||||||||||||||||| ||||||||||  |||||||||    
T  39970761 gagggaccaaaagtggaagaatctgaaattacatagacaaaatc 39970718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 42510167 - 42510210
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    ||||| ||||||||||||||||| |||| |||||||||||||||    
T  42510167 tgaaatgagggaccaaaagtggaggaatctgaaattacagggac 42510210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 42510341 - 42510388
Alignment:
Q  86 ggactaaaaccggaattcactaatattacaggaacgaaaagaggtatt 133  Q
    |||||||||||||||||| ||||||||||||| || ||||| ||||||    
T  42510341 ggactaaaaccggaattcgctaatattacagggaccaaaagtggtatt 42510388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 43539669 - 43539720
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtatt 133  Q
    ||||| |||||||||||||||  ||||||||||||| |||||||||| ||||    
T  43539669 acaggaactaaaaccggaatttgctaatattacagggacgaaaagagctatt 43539720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 43539611 - 43539653
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||| ||||||||| |||||||||| ||||||||||    
T  43539611 agggaccaaaactggaagaatttgaaattacatggacaaaatc 43539653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 17606527 - 17606490
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  17606527 gagggaccaaaagtggaggaatttgaaattacagggac 17606490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 37236772 - 37236723
Alignment:
Q  84 agggactaaaaccggaattcactaatattacaggaacgaaaagaggtatt 133  Q
    |||||||||||||||||||| || |||||||||| || ||||||| ||||    
T  37236772 agggactaaaaccggaattcgctcatattacagggaccaaaagagatatt 37236723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 18342282 - 18342314
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattaca 55  Q
    ||||||| |||||||||||||||||||||||||    
T  18342282 gagggactaaaagtggaagaatatgaaattaca 18342314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 34749296 - 34749332
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacaggga 59  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  34749296 gagggaccaaaagtggaggaatctgaaattacaggga 34749332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 39826209 - 39826245
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacaggga 59  Q
    |||||| |||||||||| |||||||||||||||||||    
T  39826209 gagggatcaaaagtggaggaatatgaaattacaggga 39826245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 48072180 - 48072144
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacaggga 59  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  48072180 gagggaccaaaagtggaggaatctgaaattacaggga 48072144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 6e-30; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 23979158 - 23979275
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacag 116  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||  ||||         |||||||||||||||||||||| ||||||||||||    
T  23979158 tgaaatgagggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacag 23979257  T
Q  117 gaacgaaaagaggtattt 134  Q
    | ||||||||||||||||    
T  23979258 ggacgaaaagaggtattt 23979275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 7126172 - 7126296
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||         |||  ||||||||||||||||| ||||||||||    
T  7126172 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaaagactaaaaccggaattcgctaatattac 7126271  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    ||| | |||||||||||||| ||||    
T  7126272 agggatgaaaagaggtatttaccct 7126296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 14144024 - 14143900
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||  ||||         |||||||||||||||||||||| ||||||||||    
T  14144024 gatgaaatgaggtaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttt-acagggactaaaaccggaattcgctaatattac 14143926  T
Q  115 aggaacgaaaagaggtattttccctt 140  Q
    ||| |||||||||||||||| |||||    
T  14143925 agggacgaaaagaggtatttaccctt 14143900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 14411820 - 14411696
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||||||| ||||||||||  ||||||||   ||||         |||||||||||||||||||||| ||||||||||    
T  14411820 gatgaaaggagggaccaaaagtggaagaatctgaaattacatagacaaaatataaatctttttttatacagggactaaaaccggaattcgctaatattac 14411721  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    ||| |||||||||||||||| ||||    
T  14411720 agggacgaaaagaggtatttaccct 14411696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 24074426 - 24074302
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||  |||          |||||||||||||||| ||||| ||||||||||    
T  24074426 gatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatatttttttttacagggactaaaaccgaaattcgctaatattac 24074327  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    | | |||||||||||||||| ||||    
T  24074326 atggacgaaaagaggtatttaccct 24074302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 24837284 - 24837168
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  ||||         |||||||||||||||||||||| ||| ||||||||| ||||    
T  24837284 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctattattacagggacga 24837185  T
Q  123 aaagaggtattttccct 139  Q
    |||||||||||| ||||    
T  24837184 aaagaggtatttaccct 24837168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 24837424 - 24837543
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||| ||||||| ||||||| |||||||||||||||||||||  ||||         |||||||||||||| ||||||| ||||||||||    
T  24837424 gatgaaaggagggagcaaaagtagaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaactggaattcgctaatattac 24837523  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| ||||||||||||||||    
T  24837524 agggacgaaaagaggtattt 24837543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 6817243 - 6817120
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacag 116  Q
    ||||| |||||||||||||||||||||| |||||||||| ||||| ||||  ||||         ||||||||||||||||||||||||||||||||||     
T  6817243 tgaaatgagggaccaaaagtggaagaatctgaaattacatggacataatctaaatctttttttt-acagggactaaaaccggaattcactaatattacaa 6817145  T
Q  117 gaacgaaaagaggtattttccctta 141  Q
    | |||||||||||||||| ||||||    
T  6817144 ggacgaaaagaggtatttaccctta 6817120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 134
Target Start/End: Complemental strand, 31799754 - 31799644
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaa 123  Q
    ||||||||||||||||||||| |||||||||||||||||||||  ||||         ||||||||| |||||||||||| ||||||||| ||| |||||    
T  31799754 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactgaaaccggaattcgctaatattatagggacgaa 31799655  T
Q  124 aagaggtattt 134  Q
    |||||||||||    
T  31799654 aagaggtattt 31799644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 41001608 - 41001726
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||  ||||         ||| |||||||||||||||||| ||||||||||    
T  41001608 gatgaaaggagggaccaaaagtggaagaatctgaaattatagggacaaaatctaaatc-ttttttttacaaggactaaaaccggaattcgctaatattac 41001706  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| ||||||| ||||||||    
T  41001707 agggacgaaaaaaggtattt 41001726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 7126031 - 7125923
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaa 123  Q
    ||||||||||||||||||||| |||||||| ||||||||||||  ||||         ||||||||||||| |||||||| |||||||||||||||||||    
T  7126031 agggaccaaaagtggaagaatctgaaattatagggacaaaatctaaatctttttttt-acagggactaaaatcggaattcgctaatattacaggaacgaa 7125933  T
Q  124 aagaggtatt 133  Q
    ||||||||||    
T  7125932 aagaggtatt 7125923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 17762401 - 17762281
Alignment:
Q  19 aaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacagga 118  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||   ||||         |||||||||||||||||||||| |||||||||||||     
T  17762401 aaaggagggaccaaaagtggaagaatctgaaattacaggaacaaaatataaatctttttttt-acagggactaaaaccggaattcgctaatattacaggg 17762303  T
Q  119 acgaaaagaggtattttccctt 140  Q
    || ||||||||||||| |||||    
T  17762302 acaaaaagaggtatttaccctt 17762281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 31799895 - 31800018
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||| |||||| |||||||| |||||||||| ||||||||||  ||||         ||||| |||||||||||||||| |||||||||     
T  31799895 gatgaaaggagggatcaaaagaggaagaatctgaaattacatggacaaaatctaaatctttttttttacagg-actaaaaccggaattcgctaatattat 31799993  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    ||| |||||||||||||||||||||    
T  31799994 agggacgaaaagaggtattttccct 31800018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 18336720 - 18336829
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaa 123  Q
    ||||| ||||||||||||||| |||||||||||||||||||||  ||||         |||||||||||||||||||||| ||||| ||||||| |||||    
T  18336720 agggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaat-ttacagggacgaa 18336818  T
Q  124 aagaggtattt 134  Q
    |||||||||||    
T  18336819 aagaggtattt 18336829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 14144165 - 14144274
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaa 123  Q
    ||||||||||||||||||||| |||||||||||||||||||||  ||||         ||||||||||||| ||||||||  |||||||||||  |||||    
T  14144165 agggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcggaattcgttaatattacagtgacgaa 14144264  T
Q  124 aagaggtatt 133  Q
    ||||||||||    
T  14144265 aagaggtatt 14144274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 17762545 - 17762661
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||||||||||||||||| ||||||||  |||||||||||  ||||         ||||||||||||||| |||||| |||||| |||||| ||||    
T  17762545 gagggaccaaaagtggaagaatctgaaattatggggacaaaatctaaatctttttttttacagggactaaaaccagaattcgctaatactacagggacga 17762644  T
Q  123 aaagaggtattttccct 139  Q
    |||||||||||| ||||    
T  17762645 aaagaggtatttaccct 17762661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 29444929 - 29444810
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||| ||||  ||||         ||||||||||||| | ||||||  |||||||||    
T  29444929 gatgaaaggagggaccaaaagtagaagaatatgaaattacaaggacataatctaaatccttttttttacagggactaaaatcagaattcgttaatattac 29444830  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||| |||||||||| |||||    
T  29444829 agggacgaaaagagatattt 29444810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 6817376 - 6817427
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6817376 gatgaaaggagtgaccaaaagtggaagaatatgaaattacagggacaaaatc 6817427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 4919105 - 4918988
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatc-nnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||          ||||| |||||||||| ||||| ||||||||||||  | |    
T  4919105 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacaggaactaaaaccgaaattcgctaatattacagagatg 4919006  T
Q  122 aaaagaggtattttccct 139  Q
    ||||||||||||| ||||    
T  4919005 aaaagaggtatttaccct 4918988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 18336591 - 18336471
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatc-nnnnnnnnnacagggactaaaaccggaattcactaatatta 113  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||||||  ||||          ||||||||||||| |||||||| |||||||||    
T  18336591 gatgaaaggagggatcaaaagcggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaatcggaattcgctaatatta 18336492  T
Q  114 caggaacgaaaagaggtattt 134  Q
     ||| |||||||||| |||||    
T  18336491 tagggacgaaaagagatattt 18336471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 24650954 - 24651078
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||| ||||||||||||||| | |||||||||||| ||||||   ||          ||| |||||||||||||||||| ||||||||||    
T  24650954 gatgaaaggagggatcaaaagtggaagaatctaaaattacagggataaaatctagattttcttttttacatggactaaaaccggaattcgctaatattac 24651053  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    ||  |||||||||||||||| ||||    
T  24651054 agagacgaaaagaggtatttaccct 24651078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 30512402 - 30512286
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||  ||||         |||||||||||||||  ||||||||||||||||||| ||||    
T  30512402 gagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatccttttttt-acagggactaaaaccaaaattcactaatattacagggacga 30512304  T
Q  123 aaagaggtattttccctt 140  Q
    |||||| ||||| |||||    
T  30512303 aaagagatatttaccctt 30512286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 30552742 - 30552626
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||  ||||         |||||||||||||||  ||||||||||||||||||| ||||    
T  30552742 gagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatccttttttt-acagggactaaaaccaaaattcactaatattacagggacga 30552644  T
Q  123 aaagaggtattttccctt 140  Q
    |||||| ||||| |||||    
T  30552643 aaagagatatttaccctt 30552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 4919245 - 4919363
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||| ||||||| ||||||| |||||||||||||||||||| | |||          ||||| |||||||||||||||| |||||||| |    
T  4919245 gatgaaaggagggatcaaaagtagaagaatctgaaattacagggacaaaat-ctaatttttttttttacaggaactaaaaccggaattcgctaatattcc 4919343  T
Q  115 aggaacgaaaagaggtattt 134  Q
    ||  ||||||||||||||||    
T  4919344 agagacgaaaagaggtattt 4919363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 27159212 - 27159327
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||||||||  |||          ||| |||||||||||| ||||| ||||||||||    
T  27159212 gatgaaagaagggaccaaaaatggaagaatataaaattacagggacaaaatctaaat---tttttttacaaggactaaaaccgaaattcgctaatattac 27159308  T
Q  115 aggaacgaaaagaggtatt 133  Q
    | | |||||||||||||||    
T  27159309 aaggacgaaaagaggtatt 27159327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 20709467 - 20709584
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||| |||| ||||||||||||||||||||||||| ||||||||||  ||||         |||||||||||||||  |||||  |||||||||    
T  20709467 gatgaaaggaaggacaaaaagtggaagaatatgaaattacatggacaaaatctaaatc-ttttttttacagggactaaaaccaaaattcgttaatattac 20709565  T
Q  115 aggaacgaaaagaggtatt 133  Q
    | | |||||||||||||||    
T  20709566 atggacgaaaagaggtatt 20709584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 29445070 - 29445178
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaa 123  Q
    ||||||||||||||||||||| |||||||||| ||||||||||  ||||         ||| |||||||||| ||||||| ||||||||||||| |||||    
T  29445070 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatctttttttttaca-ggactaaaactggaattcgctaatattacagggacgaa 29445168  T
Q  124 aagaggtatt 133  Q
    ||||| ||||    
T  29445169 aagagatatt 29445178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 993862 - 993754
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||||||||||||||||||||||||||||| |||| |||||  | |          |||||||||||||||||||||| ||||||||||||  ||||    
T  993862 gagggaccaaaagtggaagaatatgaaattacaaggactaaatctaatt---tttttttacagggactaaaaccggaattcgctaatattacagagacga 993766  T
Q  123 aaagaggtattt 134  Q
    ||||| ||||||    
T  993765 aaagaagtattt 993754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 994005 - 994100
Alignment:
Q  19 aaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||  ||||         |||||||||||||||| ||||| ||| ||||||    
T  994005 aaaggagggaccaaaagtggaagaatctgcaattacagggacaaaatctaaatcttttattctacagggactaaaaccgaaattcgctattattac 994100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 24074566 - 24074672
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcac--taatattacaggaacg 121  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||         ||||||| |||||||||||||| |  |||||||||| ||| |    
T  24074566 agggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggattaaaaccggaattcgctataatattacaagaatg 24074665  T
Q  122 aaaagag 128  Q
    |||||||    
T  24074666 aaaagag 24074672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 41001465 - 41001425
Alignment:
Q  26 ggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  41001465 ggaccaaaagtggaagaatatgaaattacagggacaaaatc 41001425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 20709333 - 20709284
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  20709333 tgaaatgagggaccaaaagtggaagaatttgaaattacagggacagaatc 20709284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 27159104 - 27159063
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaat 65  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  27159104 agggaccaaaagtggaagaatctgaaattacagggacaaaat 27159063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 22571198 - 22571159
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacag 56  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  22571198 tgaaatgagggaccaaaagtggaagaatatgaaattacag 22571159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 24650810 - 24650772
Alignment:
Q  28 accaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  24650810 accaaaagtggaagaatatgaaattacaggaacaaaatc 24650772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 14411929 - 14411972
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    ||||||||||| |||||||||| |||||||||| ||||||||||    
T  14411929 gagggaccaaacgtggaagaatctgaaattacaaggacaaaatc 14411972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 124
Target Start/End: Complemental strand, 41001412 - 41001370
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaa 124  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  41001412 acagggactaaaaccgaaattcgctaatattacagggacgaaa 41001370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 7126076 - 7126113
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  7126076 gagggaccaaaagtggaggaatttgaaattacagggac 7126113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 18336675 - 18336638
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  18336675 gagggaccaaaagtggaggaatctgaaattacagggac 18336638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 20709371 - 20709407
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacaggga 59  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  20709371 gagggacaaaaagtggaggaatatgaaattacaggga 20709407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 22571230 - 22571278
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaat 65  Q
    ||||| ||||||||||||| ||| ||||||||||||| |||||| ||||    
T  22571230 tgaaatgagggaccaaaagcggatgaatatgaaattagagggaccaaat 22571278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 24650750 - 24650706
Alignment:
Q  90 taaaaccggaattcactaatattacaggaacgaaaagaggtattt 134  Q
    |||||||| |||||  |||||||||||| ||||||||||||||||    
T  24650750 taaaaccgaaattcgttaatattacagggacgaaaagaggtattt 24650706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 12237 - 12355
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||  ||||         | |||||||||||||||||||| ||||||||||    
T  12237 gatgaaaggatggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttatagggactaaaaccggaattcgctaatattac 12336  T
Q  115 aggaacgaaaagaggtatt 133  Q
    ||| |||||||||||||||    
T  12337 agggacgaaaagaggtatt 12355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 53; Significance: 1e-21; HSPs: 3)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 4826 - 4941
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  ||||         ||||||| |||||||||||||  ||||||||||||| ||||    
T  4826 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc-ttatttttacagggattaaaaccggaatttgctaatattacagggacga 4924  T
Q  123 aaagaggtattttccct 139  Q
    |||||||||||| ||||    
T  4925 aaagaggtatttaccct 4941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 4682 - 4560
Alignment:
Q  19 aaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnn-acagggactaaaaccggaattcactaatattacagg 117  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||||   ||||          ||||||||||||| |||||||| ||||||||||| |    
T  4682 aaaggagggaccaaaagtagaagaatctcaaattacagggacaaaatttaaatcttttttttttacagggactaaaatcggaattcgctaatattacaag 4583  T
Q  118 aacgaaaagaggtattttccctt 140  Q
     |||||||||||||||| |||||    
T  4582 gacgaaaagaggtatttaccctt 4560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 4782 - 4745
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggac 60  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  4782 gagggaccaaaagtggaggaatctgaaattacagggac 4745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 7454 - 7580
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnn-acagggactaaaaccggaattcactaatatta 113  Q
    ||||||||||  |||||||||| ||||||| |||||||||||||||||||||  ||||          |||||||||||||||||||||| |||||||||    
T  7454 gatgaaaggatagaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgctaatatta 7553  T
Q  114 caggaacgaaaagaggtattttccctt 140  Q
    |||| ||||||| |||||||| |||||    
T  7554 cagggacgaaaataggtatttaccctt 7580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 7341 - 7230
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||| |||||||||||||||||||||||||||||||||||  ||||         ||||| ||||| ||| |||||| ||||||||||| | ||||    
T  7341 gagggaccgaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaggaactaacaccagaattcgctaatattacaaggacga 7242  T
Q  123 aaagaggtattt 134  Q
    ||||||||||||    
T  7241 aaagaggtattt 7230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 3990 - 3868
Alignment:
Q  17 tgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacag 116  Q
    ||||| ||| |||||| ||||||||||| |||||||||||||||| ||||  ||||         |||||||||||||||||||||| ||||||||||||    
T  3990 tgaaatgagcgaccaacagtggaagaatttgaaattacagggacataatctaaatctttttttttacagggactaaaaccggaattcgctaatattacag 3891  T
Q  117 gaacgaaaagaggtattttccct 139  Q
    | |||||||||| ||||| ||||    
T  3890 ggacgaaaagagatatttaccct 3868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 4028 - 4061
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacag 56  Q
    ||||||||||||||||| ||||||||||||||||    
T  4028 gagggaccaaaagtggaggaatatgaaattacag 4061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 4124 - 4164
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattaca 55  Q
    |||||||||||||||||||| || |||||| ||||||||||    
T  4124 gatgaaaggagggaccaaaaatgaaagaatctgaaattaca 4164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 1533 - 1408
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||  ||||         ||||||||||||| || ||||| | ||||||||    
T  1533 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacataatctaaatc-ttttttttacagggactaaaatcgaaattcgcaaatattac 1435  T
Q  115 aggaacgaaaagaggtattttccctta 141  Q
     ||  ||||||||||||||| ||||||    
T  1434 cgggtcgaaaagaggtatttaccctta 1408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 1730 - 1785
Alignment:
Q  84 agggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttccct 139  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||| |||| ||||    
T  1730 agggactaaaaccggaattcgttaatattacagggacgaaaagagggatttaccct 1785  T

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Target: scaffold0809; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 1673 - 1711
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggaca 61  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  1673 gagggaccaaaagtggaagaatctgaaattacaaggaca 1711  T

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Target: scaffold0176 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 15887 - 16007
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||    |          |||| ||||||||||||||||| ||||||||||    
T  15887 gatgaaaggagagaccaaaagtgaaagaatatgaaattacagggacaaaatc----tttttttttttacagagactaaaaccggaattcgctaatattac 15982  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    | | |||||||||| ||||| ||||    
T  15983 atggacgaaaagagatatttaccct 16007  T

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Target: scaffold0141 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 8585 - 8688
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacga 122  Q
    |||||||||||||||||||||| | |||||||||||||||||||  ||||         | |||||||||||||||||||| |||||||| ||||||| |    
T  8585 gagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatctttttttttaaagggactaaaaccggaattcgctaatattgcaggaacaa 8684  T
Q  123 aaag 126  Q
    ||||    
T  8685 aaag 8688  T

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Target: scaffold0141; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 8446 - 8324
Alignment:
Q  15 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattac 114  Q
    ||||||||||| ||||||||||| |||||| |||  |||| |||||||||||  ||||         || ||||||||||||| ||||| ||||||||||    
T  8446 gatgaaaggagagaccaaaagtgaaagaatctga--ttactgggacaaaatctaaatctttttatttacggggactaaaaccgaaattcgctaatattac 8349  T
Q  115 aggaacgaaaagaggtattttccct 139  Q
    ||| |||||||||||||||| ||||    
T  8348 agggacgaaaagaggtatttaccct 8324  T

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Target: scaffold0477 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 4932 - 4879
Alignment:
Q  86 ggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttccct 139  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||||||| ||||    
T  4932 ggactaaaaccgaaattcgctaatattacaggaacaaaaagaggtatttaccct 4879  T

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Target: scaffold0477; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 5011 - 5054
Alignment:
Q  23 gagggaccaaaagtggaagaatatgaaattacagggacaaaatc 66  Q
    |||||||||||||||||||||| | ||||||||||||| |||||    
T  5011 gagggaccaaaagtggaagaatctaaaattacagggactaaatc 5054  T

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Target: scaffold0352 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 6001 - 6058
Alignment:
Q  82 acagggactaaaaccggaattcactaatattacaggaacgaaaagaggtattttccct 139  Q
    ||||||||||||| |||||||| |||||||| |||| || ||||||||||||| ||||    
T  6001 acagggactaaaatcggaattcgctaatattgcagggaccaaaagaggtatttaccct 6058  T

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Target: scaffold0352; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 4781 - 4666
Alignment:
Q  24 agggaccaaaagtggaagaatatgaaattacagggacaaaatccgaatcnnnnnnnnnacagggactaaaaccggaattcactaatattacaggaacgaa 123  Q
    |||||||||||||||| |||| |||||||||||||||| ||||  ||           | |||||||||||| ||||||| |||||||| |||| || ||    
T  4781 agggaccaaaagtggaggaatctgaaattacagggacagaatctaaacttttttttttatagggactaaaactggaattcgctaatattgcagggactaa 4682  T
Q  124 aagaggtattttccct 139  Q
    ||||||||||| ||||    
T  4681 aagaggtatttaccct 4666  T

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