View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18482_high_3 (Length: 755)

Name: NF18482_high_3
Description: NF18482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18482_high_3
NF18482_high_3
[»] chr3 (32 HSPs)
chr3 (13-509)||(52678918-52679416)
chr3 (509-741)||(52678656-52678888)
chr3 (163-495)||(52138664-52139000)
chr3 (221-436)||(47233740-47233956)
chr3 (187-436)||(33272167-33272422)
chr3 (348-508)||(48508283-48508448)
chr3 (187-495)||(54278908-54279220)
chr3 (191-495)||(28245329-28245637)
chr3 (163-423)||(51447867-51448127)
chr3 (222-498)||(21996-22275)
chr3 (319-498)||(50960716-50960896)
chr3 (222-508)||(54128301-54128592)
chr3 (319-508)||(38430867-38431061)
chr3 (319-436)||(39235157-39235276)
chr3 (291-498)||(35033136-35033349)
chr3 (319-421)||(38060450-38060554)
chr3 (330-508)||(45289160-45289343)
chr3 (446-498)||(19676160-19676212)
chr3 (232-436)||(49503698-49503903)
chr3 (319-444)||(48953556-48953685)
chr3 (187-435)||(25191267-25191514)
chr3 (319-447)||(38850139-38850270)
chr3 (446-498)||(49042087-49042139)
chr3 (319-411)||(19737016-19737110)
chr3 (319-411)||(19757919-19758013)
chr3 (320-423)||(3186789-3186893)
chr3 (447-501)||(15296059-15296113)
chr3 (371-486)||(19162678-19162798)
chr3 (163-257)||(38849958-38850052)
chr3 (446-495)||(39600763-39600812)
chr3 (319-436)||(53519611-53519730)
chr3 (228-298)||(19676373-19676443)
[»] chr4 (34 HSPs)
chr4 (187-495)||(436117-436429)
chr4 (187-495)||(31959896-31960208)
chr4 (163-495)||(48174175-48174511)
chr4 (174-495)||(1777099-1777422)
chr4 (187-495)||(56375178-56375490)
chr4 (187-444)||(43433806-43434071)
chr4 (187-495)||(53707682-53707994)
chr4 (230-508)||(37797783-37798064)
chr4 (190-485)||(48622635-48622932)
chr4 (187-436)||(52569659-52569909)
chr4 (187-495)||(33190930-33191242)
chr4 (187-495)||(33227097-33227409)
chr4 (358-508)||(26037574-26037729)
chr4 (319-436)||(50286981-50287100)
chr4 (319-495)||(4440872-4441053)
chr4 (163-369)||(47265415-47265620)
chr4 (317-508)||(39708450-39708646)
chr4 (382-509)||(41009418-41009547)
chr4 (163-495)||(23906379-23906719)
chr4 (291-497)||(39100616-39100827)
chr4 (187-340)||(12494638-12494790)
chr4 (291-501)||(27450255-27450471)
chr4 (318-436)||(32479056-32479176)
chr4 (446-485)||(35690422-35690461)
chr4 (319-408)||(1793479-1793570)
chr4 (446-498)||(28550534-28550586)
chr4 (166-257)||(1211714-1211805)
chr4 (447-498)||(31043224-31043275)
chr4 (355-486)||(1211482-1211617)
chr4 (446-508)||(16003077-16003139)
chr4 (446-508)||(45204908-45204970)
chr4 (446-508)||(51421881-51421943)
chr4 (291-379)||(28236173-28236262)
chr4 (446-507)||(55237976-55238037)
[»] chr5 (25 HSPs)
chr5 (230-481)||(26884786-26885040)
chr5 (139-508)||(16347447-16347820)
chr5 (187-495)||(24178398-24178710)
chr5 (275-508)||(38684943-38685180)
chr5 (187-495)||(12492466-12492781)
chr5 (187-495)||(28976941-28977251)
chr5 (269-508)||(14665680-14665927)
chr5 (187-495)||(1287661-1287983)
chr5 (190-495)||(1275156-1275464)
chr5 (319-498)||(3301863-3302047)
chr5 (275-495)||(4496360-4496584)
chr5 (187-495)||(2075555-2075868)
chr5 (319-489)||(20456792-20456967)
chr5 (319-495)||(10639323-10639502)
chr5 (358-495)||(2915577-2915719)
chr5 (446-501)||(28033-28088)
chr5 (319-379)||(34273046-34273106)
chr5 (195-298)||(5305512-5305615)
chr5 (195-294)||(17340724-17340823)
chr5 (452-507)||(36200886-36200941)
chr5 (446-508)||(15168922-15168984)
chr5 (444-486)||(28186866-28186908)
chr5 (187-257)||(34272910-34272980)
chr5 (188-257)||(10639186-10639255)
chr5 (187-252)||(20318875-20318940)
[»] scaffold0018 (1 HSPs)
scaffold0018 (187-495)||(31356-31668)
[»] chr7 (40 HSPs)
chr7 (163-444)||(33072818-33073099)
chr7 (187-508)||(12841344-12841669)
chr7 (163-495)||(11593824-11594160)
chr7 (187-495)||(33349888-33350200)
chr7 (187-495)||(34869308-34869620)
chr7 (187-495)||(35906283-35906595)
chr7 (187-495)||(49029164-49029476)
chr7 (202-495)||(35559075-35559373)
chr7 (163-444)||(31005087-31005370)
chr7 (187-495)||(37617832-37618145)
chr7 (317-508)||(43491325-43491521)
chr7 (187-508)||(13859077-13859400)
chr7 (291-498)||(43281664-43281877)
chr7 (319-508)||(44855241-44855435)
chr7 (319-508)||(2885791-2885985)
chr7 (222-495)||(39906454-39906729)
chr7 (446-504)||(18795838-18795896)
chr7 (222-378)||(45836684-45836839)
chr7 (275-495)||(6374844-6375068)
chr7 (319-423)||(29650403-29650509)
chr7 (449-508)||(35922407-35922466)
chr7 (446-508)||(9210773-9210835)
chr7 (392-509)||(7273194-7273314)
chr7 (319-444)||(22349639-22349767)
chr7 (319-429)||(46356007-46356119)
chr7 (446-508)||(14057629-14057691)
chr7 (446-508)||(14367657-14367719)
chr7 (275-508)||(36136740-36136977)
chr7 (446-508)||(36239865-36239927)
chr7 (290-378)||(38606993-38607082)
chr7 (415-508)||(40979997-40980093)
chr7 (319-378)||(7273058-7273117)
chr7 (446-509)||(21517448-21517511)
chr7 (382-501)||(24598263-24598385)
chr7 (319-495)||(36652011-36652192)
chr7 (446-508)||(28628002-28628064)
chr7 (446-508)||(37976386-37976448)
chr7 (356-482)||(1011103-1011234)
chr7 (383-447)||(23404502-23404567)
chr7 (263-370)||(46014393-46014498)
[»] chr1 (34 HSPs)
chr1 (187-495)||(1210633-1210945)
chr1 (163-495)||(49347475-49347811)
chr1 (187-495)||(22089982-22090296)
chr1 (166-495)||(30202212-30202545)
chr1 (163-495)||(8671784-8672118)
chr1 (187-444)||(51601946-51602203)
chr1 (187-485)||(9592622-9592924)
chr1 (187-508)||(34792418-34792742)
chr1 (275-498)||(4001534-4001761)
chr1 (187-486)||(32231045-32231348)
chr1 (222-436)||(696192-696407)
chr1 (187-444)||(43240514-43240775)
chr1 (321-495)||(4029143-4029322)
chr1 (187-495)||(51440847-51441159)
chr1 (319-508)||(25979300-25979494)
chr1 (330-498)||(52561668-52561841)
chr1 (222-436)||(15085857-15086072)
chr1 (275-436)||(32082889-32083051)
chr1 (343-498)||(39140563-39140718)
chr1 (393-508)||(39318224-39318342)
chr1 (164-378)||(8391637-8391850)
chr1 (348-497)||(18469162-18469316)
chr1 (446-486)||(26299236-26299276)
chr1 (436-508)||(12930380-12930454)
chr1 (446-508)||(27520276-27520338)
chr1 (320-502)||(34827178-34827366)
chr1 (446-507)||(3818926-3818987)
chr1 (446-509)||(32404594-32404657)
chr1 (330-377)||(32404731-32404778)
chr1 (418-496)||(46226370-46226451)
chr1 (446-497)||(52739591-52739642)
chr1 (446-508)||(29128934-29128996)
chr1 (446-508)||(52878368-52878430)
chr1 (392-485)||(9599486-9599582)
[»] chr8 (26 HSPs)
chr8 (187-495)||(36545035-36545349)
chr8 (187-508)||(39946745-39947070)
chr8 (187-495)||(36565323-36565635)
chr8 (269-436)||(40813292-40813462)
chr8 (321-498)||(42854083-42854265)
chr8 (269-508)||(18125145-18125385)
chr8 (187-495)||(2796443-2796753)
chr8 (222-444)||(36395084-36395309)
chr8 (319-495)||(12491220-12491401)
chr8 (348-495)||(11523805-11523957)
chr8 (343-412)||(43904833-43904904)
chr8 (400-508)||(2027632-2027743)
chr8 (331-381)||(9905082-9905132)
chr8 (446-508)||(28169543-28169605)
chr8 (348-508)||(29520698-29520862)
chr8 (382-496)||(37077835-37077952)
chr8 (447-494)||(3802025-3802072)
chr8 (457-508)||(12966383-12966434)
chr8 (187-294)||(25288790-25288897)
chr8 (187-294)||(25300125-25300232)
chr8 (229-412)||(45419169-45419349)
chr8 (247-372)||(10080117-10080239)
chr8 (343-406)||(32043633-32043698)
chr8 (448-486)||(45041406-45041444)
chr8 (187-296)||(37077653-37077762)
chr8 (229-298)||(37256000-37256069)
[»] chr6 (20 HSPs)
chr6 (183-495)||(28085260-28085576)
chr6 (222-495)||(32755842-32756121)
chr6 (238-508)||(30031195-30031469)
chr6 (230-429)||(5258299-5258501)
chr6 (222-508)||(9593777-9594071)
chr6 (291-501)||(21351913-21352129)
chr6 (354-509)||(26291833-26291991)
chr6 (221-423)||(5631740-5631947)
chr6 (319-436)||(608176-608295)
chr6 (275-498)||(20427716-20427942)
chr6 (329-508)||(28026896-28027079)
chr6 (445-485)||(6055863-6055903)
chr6 (329-377)||(24665839-24665887)
chr6 (319-436)||(35043585-35043704)
chr6 (163-340)||(9706640-9706816)
chr6 (319-438)||(30679425-30679546)
chr6 (319-444)||(10099994-10100122)
chr6 (349-436)||(7133795-7133884)
chr6 (349-436)||(7136718-7136807)
chr6 (447-508)||(24665963-24666024)
[»] chr2 (25 HSPs)
chr2 (163-495)||(8180644-8180980)
chr2 (182-376)||(16097192-16097389)
chr2 (163-495)||(3865936-3866272)
chr2 (275-508)||(25834655-25834891)
chr2 (222-436)||(41763186-41763400)
chr2 (275-495)||(38452768-38452995)
chr2 (222-508)||(12734624-12734913)
chr2 (222-498)||(38429807-38430087)
chr2 (187-486)||(3243744-3244045)
chr2 (187-500)||(36183339-36183656)
chr2 (319-495)||(2610607-2610788)
chr2 (291-474)||(18424480-18424669)
chr2 (348-495)||(7326242-7326394)
chr2 (319-436)||(24583776-24583895)
chr2 (446-497)||(13149483-13149534)
chr2 (319-377)||(43752152-43752210)
chr2 (321-495)||(451730-451909)
chr2 (319-421)||(41197387-41197491)
chr2 (319-436)||(23997633-23997752)
chr2 (452-507)||(11744680-11744735)
chr2 (446-508)||(9496017-9496079)
chr2 (222-295)||(38434874-38434947)
chr2 (446-498)||(12882124-12882176)
chr2 (400-508)||(28508780-28508891)
chr2 (446-508)||(41545556-41545618)
[»] scaffold0570 (1 HSPs)
scaffold0570 (319-495)||(1030-1211)
[»] scaffold0024 (1 HSPs)
scaffold0024 (222-508)||(82644-82931)
[»] scaffold0036 (1 HSPs)
scaffold0036 (190-301)||(4552-4663)
[»] scaffold0045 (1 HSPs)
scaffold0045 (319-429)||(86760-86872)
[»] scaffold0113 (1 HSPs)
scaffold0113 (165-368)||(11810-12014)
[»] scaffold0157 (1 HSPs)
scaffold0157 (187-340)||(25687-25839)
[»] scaffold0199 (1 HSPs)
scaffold0199 (429-507)||(14715-14795)


Alignment Details
Target: chr3 (Bit Score: 407; Significance: 0; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 13 - 509
Target Start/End: Complemental strand, 52679416 - 52678918
Alignment:
Q  13 atgaagaccgaaatgtaacttcaaaagaggacacttcaaagcaaagcattattgtttaaatgaggttctaatattaatggctgaaaatggctccaaaata 112  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  52679416 atgaagaccgaaatgtaacttcaaaagaggacccttcaaagcaaagcattattgtttatatgaggttctaatattaatggctgaaaatggctccaaaata 52679317  T
Q  113 tatattatatcccgattggaaaattcgacaacattcagactcacgaaatcgtatggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataa 212  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||     
T  52679316 tatattatatcccgattggaaaattcgacaacattcagactgacgaagtcgtatggtacaaagtgttaaacggttaagagtcaacacaagaatcaaatag 52679217  T
Q  213 atatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct 312  Q
      |||  | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  52679216 gcataacagagatggggatgttgcattggatcagcggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaaatagcatct 52679117  T
Q  313 -tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttggtaagaaaaatagatcggatggaggagagt 411  Q
     ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  52679116 atagcagaaaagttggaagaaaataggctctggtgatttggacatgtagagagaagacttgtagatgttggtaagaaaaatagatcggatggaggagagt 52679017  T
Q  412 cgggttaaaagatgtagaagaaga-ctaggaaaattaagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgatat 509  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  52679016 cgggttaaaagatgtagaagaagacctaggaaaactaagagaaactattatgaaagatttagaggttaatgagttgaattcaaatatgattcatgatat 52678918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 509 - 741
Target Start/End: Complemental strand, 52678888 - 52678656
Alignment:
Q  509 tcaacctcatttagtaagataaaacttagttgttgttattgtcgccgcttgtgatcggaaaattcagcttgatttatgaaataacaggaaaaatgcacaa 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  52678888 tcaacctcatttagtaagataaaacttagttgttgttattgtcgccgcttatgatcggaaaattcagcgtgatttatgaaataacaggaaaaatgcacaa 52678789  T
Q  609 attgaagtagtatgacatacatgtgcttcctgttccnnnnnnnnnnnnnnnnntctacaatattcagacaacttccaactacaatattatgagaaatcta 708  Q
    || |||||| ||||||||||||||||||||||||||                 |||||||||||||||||||||||||||||||||||||||||||||||    
T  52678788 atggaagtactatgacatacatgtgcttcctgttccaaaaataaaataaaaaatctacaatattcagacaacttccaactacaatattatgagaaatcta 52678689  T
Q  709 tttagaaaggttaaacaacgaatggtgtaaatt 741  Q
    |||||||||||||||||||||||||||||||||    
T  52678688 tttagaaaggttaaacaacgaatggtgtaaatt 52678656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 163 - 495
Target Start/End: Original strand, 52138664 - 52139000
Alignment:
Q  163 gtatggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatga 262  Q
    ||||||||| |||||||   ||| |||||||||| | ||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| |||| |       
T  52138664 gtatggtacgaagtgttgggcggttaagagtcaagatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacat 52138763  T
Q  263 gataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtaga 361  Q
    ||||  ||||  |||||||||||||||  ||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||    
T  52138764 gataggattaggaatgacaccattaga--gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtaga 52138861  T
Q  362 gagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaact 456  Q
    |||||||||||||||||   ||||||||| |||||||   |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  ||||||||     
T  52138862 gagaagacctgtagatgccgtggtaagaagaatagattaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaacc 52138961  T
Q  457 attatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||||  ||  |||||||||| ||||||||| || |||||    
T  52138962 attagaaaggatttagaggtcaatgagttggatccaaat 52139000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 221 - 436
Target Start/End: Complemental strand, 47233956 - 47233740
Alignment:
Q  221 aagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcata 319  Q
    |||||| |||| |||| |||||| |||||||| |||| |   ||||| |||| ||||||||||||||||  |||||| |||| |||||| || ||| | |    
T  47233956 aagatgaggatattgcgttggatgagtggtaagactagacatgataagattagaaatgacaccattaga--gagagaatggaggtagcacctatagtaga 47233859  T
Q  320 aaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggtt 417  Q
    |||||||| ||||||||||||  | || ||||||||||||||||||||||| |||||||   | || |||| | ||||||  ||||||||||||| ||||    
T  47233858 aaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgttagaagagtagatcaaatggaggagagtcaggtt 47233759  T
Q  418 aaaagatgtagaagaagac 436  Q
    ||||||||| |||||||||    
T  47233758 aaaagatgttgaagaagac 47233740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 187 - 436
Target Start/End: Complemental strand, 33272422 - 33272167
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| |||||||||||||||| |||||||| |||| |   ||||  ||||| ||||||||||||    
T  33272422 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcattggatgagtggtaagactagacatgataggattaagaatgacaccatt 33272323  T
Q  287 agaaagagagagtggaagtagcatct-----tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--t 379  Q
    ||| |||||||||||  |||||| ||     ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||| |||||||||       
T  33272322 agagagagagagtgggggtagcacctatatatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccg 33272224  T
Q  380 tggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagac 436  Q
    |||||||||   || |||  |||||||||||||  ||||||||| ||||| ||||||    
T  33272223 tggtaagaagtgtatatcaaatggaggagagtcaagttaaaagaggtagaggaagac 33272167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 348 - 508
Target Start/End: Original strand, 48508283 - 48508448
Alignment:
Q  348 tttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaa 444  Q
    ||||| ||||||||||||||||| ||||||||||  ||||||| | |||||| |||||||||||||| ||| |||||| ||||| ||||| |||||||||    
T  48508283 tttgggcatgtagagagaagacccgtagatgttgtcgtaagaagagtagatcagatggaggagagtcaggtcaaaagaggtagaggaagacctaggaaaa 48508382  T
Q  445 --ttaagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
       |||||||||| ||||  ||  |||||||||| ||||||||| ||||||||||| || ||||||    
T  48508383 ctataagagaaaccattagaaaggatttagaggtcaatgagttggattcaaatatggtttatgata 48508448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 187 - 495
Target Start/End: Original strand, 54278908 - 54279220
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    ||||||||||||  |||||||  ||| | ||| | ||||| ||||||||| |||||| |||||||| |||| |  |||||  ||||  ||||||||||||    
T  54278908 taagagtcaacataagaatcaggtaagtgtagcagagatgaggatgttgcgttggataagtggtaagactagacaagatagaattaggaatgacaccatt 54279007  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgt--tggt 383  Q
    |||  |||||||| |  |||||| || ||| | ||||||||| ||||||||||||  |  | ||||| || |||||||||||||| |||||||   ||||    
T  54279008 aga--gagagagtaggggtagcacctatagtagaaaagttggtagaaaataggcttagacggtttgggcacgtagagagaagacccgtagatgccgtggt 54279105  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    || || | ||||||  |||||||||||||  ||||||||| ||||||||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| |||    
T  54279106 aaaaagagtagatcaaatggaggagagtcaagttaaaagaggtagaagaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaat 54279205  T
Q  481 gagttgaattcaaat 495  Q
    |||||| || |||||    
T  54279206 gagttggatccaaat 54279220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 191 - 495
Target Start/End: Original strand, 28245329 - 28245637
Alignment:
Q  191 agtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaa 290  Q
    |||||||| |||||| || ||| | ||| ||||||| ||||||||| |||||| |||||||| ||||     ||||  ||||  ||||||| |||||||     
T  28245329 agtcaacatgagaattaagtaagtgtagcaaagatgaggatgttgcgttggatgagtggtaagactagcctggataggattaggaatgacatcattaga- 28245427  T
Q  291 agagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaaga 387  Q
     ||||||||||  |||||| || ||| | ||||||||| ||||||||| ||  | || ||||| ||||||||||||| ||| |||||||   ||||||||    
T  28245428 -gagagagtgggggtagcacctatagtagaaaagttggtagaaaatagacttagatggtttgggcatgtagagagaaaacccgtagatgccgtggtaaga 28245526  T
Q  388 aaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagt 484  Q
    | | || |||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| |||||||    
T  28245527 agagtatatcaaatggaggagagtcaagttaaaagaggtagatgaagacctaggaaaactattagagaaacgattagaaatgatttagaggtcaatgagt 28245626  T
Q  485 tgaattcaaat 495  Q
    || || |||||    
T  28245627 tggatccaaat 28245637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 163 - 423
Target Start/End: Complemental strand, 51448127 - 51447867
Alignment:
Q  163 gtatggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatga 262  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| |||| |       
T  51448127 gtatggtacggagtgttaggcggttaagagtcaacatgagaatcaactaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacag 51448028  T
Q  263 gataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtaga 361  Q
    ||||  ||||  ||||||||||||||  ||||||||| |  |||||| || ||| | ||||||||| ||||||||||||  | |  ||||| ||||||||    
T  51448027 gataggattaggaatgacaccattag--agagagagtag-ggtagcacctatagtagaaaagttggtagaaaataggcttagatagtttgggcatgtaga 51447931  T
Q  362 gagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaaga 423  Q
    ||||||| | |||||||   ||||||||| | ||||||  |||||||||||||  |||||||||    
T  51447930 gagaagatccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaaga 51447867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 222 - 498
Target Start/End: Original strand, 21996 - 22275
Alignment:
Q  222 agatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataa 320  Q
    ||||| |||||||||  ||||| |||||||| |||| |   ||||  ||||  |||| ||||||||||  ||||||||||  |||||| || ||| | ||    
T  21996 agatgaggatgttgcgctggatgagtggtaagactagacatgataggattaggaatgtcaccattaga--gagagagtgggggtagcacctatagtagaa 22093  T
Q  321 aagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggtta 418  Q
    ||||||| ||||| ||||||  | || ||||||||||||||||||||||| |||||||   | ||||||| | |||||   |||||||||||||||||||    
T  22094 aagttggtagaaa-taggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaagaagagtagattaaatggaggagagtcgggtta 22192  T
Q  419 aaagatgtagaagaagac-taggaaaa--ttaagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatg 498  Q
    ||||| ||||| |||||| || |||||   | |||||||| ||||  ||  |||||||||| ||||||||| || ||||||||    
T  22193 aaagaggtagaggaagacttaagaaaaccattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatg 22275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 319 - 498
Target Start/End: Complemental strand, 50960896 - 50960716
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||| ||| ||||||||||||  |||| ||||| ||||||||||||||||||    ||||||  | ||||| | |||||| |||||||||||||||| |    
T  50960896 aaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacct----atgttgtagaaagaagagtagatcagatggaggagagtcggat 50960801  T
Q  417 taaaagatgtagaagaagac-taggaaaa--ttaagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatg 498  Q
      ||||| | ||| |||||| ||| ||||  |||||||||||||||| ||||  ||||||| ||||||||||| || ||||||||    
T  50960800 cgaaagagggagaggaagacctagaaaaaatttaagagaaactattaggaaaggtttagagattaatgagttggatccaaatatg 50960716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 222 - 508
Target Start/End: Original strand, 54128301 - 54128592
Alignment:
Q  222 agatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataa 320  Q
    ||||| ||||||||| || ||| ||||||||||||| | | ||||  ||||  |||||||||||||||  ||||| || |  |||||| || ||| | ||    
T  54128301 agatgaggatgttgcgtttgatgagtggtaaaactagacgcgataggattatgaatgacaccattaga--gagagtgttggggtagcacctatagtagaa 54128398  T
Q  321 aagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggtta 418  Q
    ||| ||| ||||||||||||  |||| ||||| |||||||||| |||||||||||||| ||  ||| | | | |||||| ||||||||  |||| | |      
T  54128399 aagatggtagaaaataggcttaggtggtttgggcatgtagagaaaagacctgtagatgatgcagtacgtagagtagatcagatggaggttagtcagatcg 54128498  T
Q  419 aaagatgtagaagaaga-ctaggaaa---attaagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||||| ||||| ||||| |||| |||   ||||||||||||||| | |||| |||||||||| ||||||||| |  |||||||| || ||||||    
T  54128499 aaagaggtagaggaagacctagaaaaactattaagagaaactataaggaaagatttagaggtcaatgagttggacccaaatatggtttatgata 54128592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 319 - 508
Target Start/End: Original strand, 38430867 - 38431061
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||| ||| ||||||||||||  |||   |||| |||||||||||| |||||| ||||||||  ||| ||| | |||||| ||||||||||||||   |    
T  38430867 aaaagatggtagaaaataggcttaggttgattgggcatgtagagagacgacctgcagatgttgtagtatgaagagtagatcagatggaggagagtcaaat 38430966  T
Q  417 taaaagatgtagaagaagact-aggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
     |||||| ||||| ||||||| || |||| ||  |||||||||||| || ||  ||||||||||||||||||| || |||||||| || ||||||    
T  38430967 caaaagaggtagaggaagacttagaaaaactacaagagaaactattgtggaaggtttagaggttaatgagttggatccaaatatggtttatgata 38431061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 39235157 - 39235276
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||| ||| ||||||||||||  |||| ||||| ||||||||||||||||||||||||||||  ||| ||| | |||||| ||||||||| |||| | |    
T  39235157 aaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacctgtagatgttgtagtacgaagagtagatcagatggaggaaagtcagat 39235256  T
Q  417 taaaagatgtagaagaagac 436  Q
     |||||| ||||| ||||||    
T  39235257 caaaagaggtagaggaagac 39235276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 291 - 498
Target Start/End: Original strand, 35033136 - 35033349
Alignment:
Q  291 agagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaaga 387  Q
    |||||||||||  |||||| || ||| | ||||||||| ||||||||||||    || ||||||||||||||||||||||| |||||||   | ||||||    
T  35033136 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttatatggtttggacatgtagagagaagacccgtagatgccattgtaaga 35033235  T
Q  388 aaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaa--ttaagagaaactattatgaaaaatttagaggttaatgagt 484  Q
    | | || |||  ||||||||||||| |||||||||| ||||| ||||| ||| |||||   |  ||||||| ||||  ||| |||||||||| |||||||    
T  35033236 agagtaaatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagt 35033335  T
Q  485 tgaattcaaatatg 498  Q
    || || ||||||||    
T  35033336 tggatccaaatatg 35033349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 319 - 421
Target Start/End: Original strand, 38060450 - 38060554
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||||||  | || |||||||||||||||||||||||||||||||   | ||||||| | |||||   ||||||||||||| |||    
T  38060450 aaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacctgtagatgccgtcgtaagaagagtagattaaatggaggagagtcaggt 38060549  T
Q  417 taaaa 421  Q
    |||||    
T  38060550 taaaa 38060554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 508
Target Start/End: Complemental strand, 45289343 - 45289160
Alignment:
Q  330 gaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggttaaaagatgta 427  Q
    |||||||||||  |||| ||||| || |||||||||| || ||||||| |||  ||||||| | |||||| ||||||||| |||  | ||| ||||  ||    
T  45289343 gaaaataggcttaggtggtttgggcacgtagagagaacacttgtagattttgtagtaagaagagtagatcagatggaggatagttagattacaagagata 45289244  T
Q  428 gaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    || ||||| ||| ||||| ||  ||||||||||||| |||| |||||||| ||||||||||| || |||||||| || ||||||    
T  45289243 gaggaagatctatgaaaactataagagaaactattaggaaagatttagagattaatgagttggatccaaatatggtttatgata 45289160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 446 - 498
Target Start/End: Complemental strand, 19676212 - 19676160
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatg 498  Q
    ||||||||||||||| ||||||||||||||||||||||||| || ||||||||    
T  19676212 taagagaaactattaggaaaaatttagaggttaatgagttggatccaaatatg 19676160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 232 - 436
Target Start/End: Complemental strand, 49503903 - 49503698
Alignment:
Q  232 gttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaag 330  Q
    |||| ||||||| |||||||| |||| | ||||||  |||   |||||||||||||||  ||||||||  | |||||| || ||| | ||||| ||| ||    
T  49503903 gttggattggatgagtggtaagactagacgagataggattgggaatgacaccattaga--gagagagttcaggtagcacctatagtagaaaagatggtag 49503806  T
Q  331 aaaataggctccggtgatttggacatgtagagagaagacctgtagatgttggtaagaaaaa---tagatcggatggaggagagtcgggttaaaagatgta 427  Q
    ||||||||||  |||| ||||| |||||||||||||||||  |||||||| |||| | |||   |||||| |||||||| ||||| | ||| ||||||||    
T  49503805 aaaataggcttaggtggtttgggcatgtagagagaagaccaatagatgtt-gtaatacaaacagtagatcagatggaggggagtctgattagaagatgta 49503707  T
Q  428 gaagaagac 436  Q
    || ||||||    
T  49503706 gaggaagac 49503698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 444
Target Start/End: Complemental strand, 48953685 - 48953556
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaa-gacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcggg 415  Q
    ||||||||| ||||||||  ||  | |||||||| |||||| |||||| |||| | ||||||||  ||||||| | |||||| |||||||||||||||||    
T  48953685 aaaagttggtagaaaataaacttagatgatttgggcatgtaaagagaaagacccgcagatgttgtcgtaagaagagtagatcagatggaggagagtcggg 48953586  T
Q  416 ttaaaagatgtagaagaaga-ctaggaaaa 444  Q
    | |||||| ||||| ||||| |||||||||    
T  48953585 tcaaaagaagtagaggaagacctaggaaaa 48953556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 435
Target Start/End: Original strand, 25191267 - 25191514
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    ||||||||||||||||| | || ||| | ||| | ||||| |||||||||  ||||| |||||||| |||| |   ||||  ||||| ||||||| ||||    
T  25191267 taagagtcaacacgagagtaaagtaagtgtagcagagatgaggatgttgcgctggatgagtggtaagactagacatgatatgattaagaatgacatcatt 25191366  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagat---gttgg 382  Q
    |||    |||| |||  |||||| || ||| | |||| |||||||||||||| ||  | || ||||||||||||||||||||||| ||||||   ||| |    
T  25191367 aga----gagaatgggggtagcacctatagtagaaaaattggaagaaaatagacttagatggtttggacatgtagagagaagacccgtagataccgtt-g 25191461  T
Q  383 taagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga 435  Q
    |||||| |  |||||  ||||||||||| | |||||||||| ||||| |||||    
T  25191462 taagaagagaagatcaaatggaggagagcccggttaaaagaggtagaggaaga 25191514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 319 - 447
Target Start/End: Original strand, 38850139 - 38850270
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||| ||  | || ||||| ||||||||||||||| | ||||| || |  ||||||| | ||||||| |||||||||||||  ||    
T  38850139 aaaagttggtagaaaatagacttagatggtttgggcatgtagagagaagatcagtagaggtcgtcgtaagaagagtagatcgaatggaggagagtcaagt 38850238  T
Q  417 taaaagatgtagaagaaga-ctaggaaaatta 447  Q
    || |||| ||||| ||||| ||||||||||||    
T  38850239 tagaagaggtagaggaagacctaggaaaatta 38850270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 446 - 498
Target Start/End: Original strand, 49042087 - 49042139
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatg 498  Q
    ||||||||||||||| |||| |||||||||||||||||||| || ||||||||    
T  49042087 taagagaaactattaggaaagatttagaggttaatgagttggatccaaatatg 49042139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 319 - 411
Target Start/End: Original strand, 19737016 - 19737110
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagt 411  Q
    ||||| ||| |||||||||| |  |||| ||||  |||| |||||||||||||||||||||||  ||||||| | |||||| |||||||||||||    
T  19737016 aaaagatggtagaaaataggtttaggtggtttgagcatgcagagagaagacctgtagatgttgtagtaagaagagtagatcagatggaggagagt 19737110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 319 - 411
Target Start/End: Original strand, 19757919 - 19758013
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagt 411  Q
    ||||| ||| |||||||||| |  |||| ||||  |||| |||||||||||||||||||||||  ||||||| | |||||| |||||||||||||    
T  19757919 aaaagatggtagaaaataggtttaggtggtttgagcatgcagagagaagacctgtagatgttgtagtaagaagagtagatcagatggaggagagt 19758013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 320 - 423
Target Start/End: Original strand, 3186789 - 3186893
Alignment:
Q  320 aaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgt--tggtaagaaaaatagatcggatggaggagagtcgggtt 417  Q
    |||||||| ||||||||||||  | |||||||| |||||||||||||||  |||||||||  | |||||||||||||||| ||| ||| | |||| |||     
T  3186789 aaagttggtagaaaataggcta-gatgatttgggcatgtagagagaagatttgtagatgtcattgtaagaaaaatagatcagattgagaaaagtcaggtc 3186887  T
Q  418 aaaaga 423  Q
    ||||||    
T  3186888 aaaaga 3186893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 447 - 501
Target Start/End: Original strand, 15296059 - 15296113
Alignment:
Q  447 aagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgatt 501  Q
    |||||||||||||| |||| |||||||||||||||| ||| || |||||||||||    
T  15296059 aagagaaactattaggaaagatttagaggttaatgaattggatccaaatatgatt 15296113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 371 - 486
Target Start/End: Complemental strand, 19162798 - 19162678
Alignment:
Q  371 tgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagac-taggaaaatta--agagaaactattatgaaa 465  Q
    |||||||||||  ||||||| | |||||| |||| ||||||||| ||| ||||||  |||| |||||| |||||||  ||  ||||||||||||| ||||    
T  19162798 tgtagatgttgtcgtaagaagagtagatcagatgaaggagagtcaggtcaaaagagttagaggaagacctaggaaatctataagagaaactattaggaaa 19162699  T
Q  466 aatttagaggttaatgagttg 486  Q
     |||||||| |||||||||||    
T  19162698 gatttagagattaatgagttg 19162678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 257
Target Start/End: Original strand, 38849958 - 38850052
Alignment:
Q  163 gtatggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaacta 257  Q
    |||||||||||||||||   ||| |||||||||||||||||||||| ||| | ||| | ||||| |||||||||  ||||| ||| |||| ||||    
T  38849958 gtatggtacaaagtgttgggcggttaagagtcaacacgagaatcaagtaagtgtagcagagatgaggatgttgcgctggatgagtagtaagacta 38850052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 446 - 495
Target Start/End: Complemental strand, 39600812 - 39600763
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||||||||||||||| |||| |||||||||||||||||||| || |||||    
T  39600812 taagagaaactattaagaaagatttagaggttaatgagttggatccaaat 39600763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 53519611 - 53519730
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||||||  | || |||||||||| | |||||||| | |||||||   | ||||||| | ||||||  |||||||||||||  ||    
T  53519611 aaaagttggtagaaaataggcttagatgttttggacatgaatagagaagaaccgtagatgccgttgtaagaagagtagatcaaatggaggagagtcatgt 53519710  T
Q  417 taaaagatgtagaagaagac 436  Q
    ||||||| ||||| ||||||    
T  53519711 taaaagaggtagaggaagac 53519730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 228 - 298
Target Start/End: Complemental strand, 19676443 - 19676373
Alignment:
Q  228 ggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagag 298  Q
    |||||||||||||||| || ||||| |||| ||| ||||| ||||  | ||||||||||||| ||||||||    
T  19676443 ggatgttgcattggatgagcggtaagactagatgggataagattaggagtgacaccattagagagagagag 19676373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 3e-38; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 187 - 495
Target Start/End: Original strand, 436117 - 436429
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| ||| |||| |||| |   ||||  ||||| ||||||||||||    
T  436117 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtcgtaagactagacatgataggattaagaatgacaccatt 436216  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    |||  ||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | |||||||| |||||||||||||||||||||||||   ||||    
T  436217 aga--gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacctgtagatgccgtggt 436314  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| | ||  ||  |||||||||| |||    
T  436315 aagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccactagaaaggatttagaggtcaat 436414  T
Q  481 gagttgaattcaaat 495  Q
    ||||||||| |||||    
T  436415 gagttgaatccaaat 436429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 187 - 495
Target Start/End: Complemental strand, 31960208 - 31959896
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| |||| |   ||||  ||||  ||||||||||||    
T  31960208 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 31960109  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    |||  ||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| |||||||   ||||    
T  31960108 aga--gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggt 31960011  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||||||||  ||  |||||||||| |||    
T  31960010 aagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaactattagaaaggatttagaggtcaat 31959911  T
Q  481 gagttgaattcaaat 495  Q
    |||||| || |||||    
T  31959910 gagttggatccaaat 31959896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 163 - 495
Target Start/End: Complemental strand, 48174511 - 48174175
Alignment:
Q  163 gtatggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatga 262  Q
    |||||||||  ||||||  |||| |||||||||||| || |||||| ||| ||||| ||||||| ||||||||| |||||| |||||||| |||| |       
T  48174511 gtatggtacggagtgttggacggttaagagtcaacatgaaaatcaagtaagtatagcaaagatgaggatgttgcgttggatgagtggtaagactagacat 48174412  T
Q  263 gataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtaga 361  Q
    ||||  ||||  |||||||||||||||  ||||||||||  ||| || || ||| | ||||||||| ||||||||||||  | |||||||| ||||||||    
T  48174411 gatatgattaggaatgacaccattaga--gagagagtgggggtaacacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtaga 48174314  T
Q  362 gagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaact 456  Q
    ||||||||| |||||||   ||||||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| ||| ||||| ||  ||||||||     
T  48174313 gagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaagaaaactattagagaaacc 48174214  T
Q  457 attatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||||  ||  |||||||||| ||||||||| || |||||    
T  48174213 attagaaaggatttagaggtcaatgagttggatccaaat 48174175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 174 - 495
Target Start/End: Complemental strand, 1777422 - 1777099
Alignment:
Q  174 agtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaa 273  Q
    |||||| || || |||||||||||| || |||||| ||| ||||| ||||||| ||||||||| |||||| |||||||| |||| |   ||||  ||||     
T  1777422 agtgttgaaaggttaagagtcaacatgaaaatcaagtaagtatagcaaagatgaggatgttgcgttggatgagtggtaagactagacatgataggattag 1777323  T
Q  274 aaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctg 372  Q
     ||||||||||||    ||||||||||||| ||||| || ||| | ||||||||| ||||||||||||  | || ||||||||| ||||||||||||       
T  1777322 gaatgacaccatt----agagagagtggaaatagcacctatagtaaaaaagttggtagaaaataggcttagatggtttggacatctagagagaagactca 1777227  T
Q  373 tagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaa 467  Q
    ||||||   ||||||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||| |    
T  1777226 tagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaaga 1777127  T
Q  468 tttagaggttaatgagttgaattcaaat 495  Q
    ||||||||| ||||||||| || |||||    
T  1777126 tttagaggtcaatgagttggatccaaat 1777099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 187 - 495
Target Start/End: Original strand, 56375178 - 56375490
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| |||||||||| || | ||| | ||||| ||||||||| |||||| |||||||| |||| |  |||||| ||||  ||||||||||||    
T  56375178 taagagtcaacatgagaatcaaacaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaagataagattaggaatgacaccatt 56375277  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    ||  ||||||||| |  |||||| || ||  | ||||||||| |||||| |||||  | || ||||| ||||||||||||||||| |||||||   ||||    
T  56375278 ag--agagagagtaggggtagcacctataatagaaaagttggtagaaaacaggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggt 56375375  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | |||||   |||||||||||||  ||||||||| ||||| ||||| ||| ||||| ||  |||||||| ||||  ||  |||||||||| |||    
T  56375376 aagaagagtagataaaatggaggagagtcaagttaaaagaggtagaggaagacctaagaaaactattagagaaaccattagaaaggatttagaggtgaat 56375475  T
Q  481 gagttgaattcaaat 495  Q
    |||||| || |||||    
T  56375476 gagttggatccaaat 56375490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 187 - 444
Target Start/End: Original strand, 43433806 - 43434071
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| ||||| || |||| |  |||||  ||||  ||||||||||||    
T  43433806 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggcaagactagacaagataggattaggaatgacaccatt 43433905  T
Q  287 agaaagagagag----tggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--t 379  Q
    ||| ||||||||    |||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| |||||||       
T  43433906 agagagagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccg 43434005  T
Q  380 tggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaa 444  Q
    ||||||||| | || |||  |||||||||||||  ||||||||| ||||| ||||| |||||||||    
T  43434006 tggtaagaagagtaaatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaa 43434071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 187 - 495
Target Start/End: Original strand, 53707682 - 53707994
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| ||| |||| |||| |   ||||  | ||  ||||||||||||    
T  53707682 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtagtaagactagacatgataggactaggaatgacaccatt 53707781  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    ||||||||||  |||| |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| |||||||   ||||    
T  53707782 agaaagagag--tggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggt 53707879  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | || |||  |||||||| ||||  ||||||||| ||||| ||||| | ||||||| ||  |||||||| ||||  ||  |||||||||| |||    
T  53707880 aagaagagtatatcaaatggaggatagtcaagttaaaagaggtagaggaagaccgaggaaaactattagagaaaccattagaaaggatttagaggtcaat 53707979  T
Q  481 gagttgaattcaaat 495  Q
    |||||| || |||||    
T  53707980 gagttggatccaaat 53707994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 230 - 508
Target Start/End: Original strand, 37797783 - 37798064
Alignment:
Q  230 atgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttgga 328  Q
    ||||||| |||||| |||| ||| |||| |   ||||| |||| ||||||||||||||||  ||||||||||| |||||| || ||| | |||||||||     
T  37797783 atgttgcgttggatgagtgataagactagacatgataagattagaaatgacaccattaga--gagagagtggaggtagcacctatagtagaaaagttggt 37797880  T
Q  329 agaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgt 426  Q
    ||||||||||||  | || |||||||||||||||||||||   |||||||   | ||||||| | ||||||  ||||| ||||||| ||||||||||| |    
T  37797881 agaaaataggcttagatggtttggacatgtagagagaagattcgtagatgccgtcgtaagaagagtagatcaaatggatgagagtcaggttaaaagat-t 37797979  T
Q  427 agaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||| ||||| ||||||||| ||  |||||||  ||||  ||  ||||||| || |||||||||||| |||||||| || ||||||    
T  37797980 agaggaagatctaggaaaactattagagaaatcattagaaaggatttagaagtcaatgagttgaatccaaatatggtttatgata 37798064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 190 - 485
Target Start/End: Complemental strand, 48622932 - 48622635
Alignment:
Q  190 gagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattaga 289  Q
    ||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| |||| |   ||||  ||||  |||||||||||||||    
T  48622932 gagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgctttggatgagtggtaagactagacatgataggattaggaatgacaccattaga 48622833  T
Q  290 aagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaag 386  Q
        ||||||||  |||||| |  ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| ||| |||   |||||||    
T  48622832 ----gagagtgggggtagcacccatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtaaatgccgtggtaag 48622737  T
Q  387 aaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgag 483  Q
    ||||  |||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||  ||||  ||| |||||||||| ||||||    
T  48622736 aaaagaagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaatcattagaaaagatttagaggtcaatgag 48622637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 187 - 436
Target Start/End: Complemental strand, 52569909 - 52569659
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||  ||||||||  |||||| || ||||| |||| |   ||||  ||||  ||||||||||||    
T  52569909 taagagtcaacatgagaatcaagtaagtgtagcagagatcaggatgttgtgttggatgaggggtaagactagacaggataggattaggaatgacaccatt 52569810  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    |||  ||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| |||||||   ||||    
T  52569809 aga--gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggt 52569712  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagac 436  Q
    ||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||||    
T  52569711 aagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagac 52569659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 187 - 495
Target Start/End: Complemental strand, 33191242 - 33190930
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| |||||||||  ||||| |||||||| | || ||  ||||  ||||  ||||||||||||    
T  33191242 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgctggatgagtggtaagattagataggataggattaggaatgacaccatt 33191143  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    ||  |||||||||||  |||||| || ||| | ||||||||| ||||||||| ||  | |  ||||| ||||||||||||||||| |||||||   || |    
T  33191142 ag--agagagagtgggggtagcacctatagtagaaaagttggtagaaaatagacttagattgtttgggcatgtagagagaagacccgtagatgccgtgtt 33191045  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    |||||   ||||||  |||||| ||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| |||    
T  33191044 aagaagggtagatcaaatggagaagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaat 33190945  T
Q  481 gagttgaattcaaat 495  Q
    ||||||||| |||||    
T  33190944 gagttgaatccaaat 33190930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 187 - 495
Target Start/End: Original strand, 33227097 - 33227409
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||  ||| | ||| | ||||| |||||||||  ||||| |||||||| |||| |   ||||  ||||| ||||||||||||    
T  33227097 taagagtcaacatgagaatcatgtaagtgtagcagagatgaggatgttgcgctggatgagtggtaagactagacatgataggattaagaatgacaccatt 33227196  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    ||  |||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | |  ||||| ||||||||||||||||| |||||||   || |    
T  33227197 ag--agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagattgtttgggcatgtagagagaagacccgtagatgccgtgtt 33227294  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | ||||||  ||||| |||||||  ||||||||| ||||| ||||| ||||||||| ||  ||| |||| ||||  ||  |||||||||| |||    
T  33227295 aagaagagtagatcaaatggaagagagtcaagttaaaagaggtagatgaagacctaggaaaactattagaaaaaccattagaaaggatttagaggtcaat 33227394  T
Q  481 gagttgaattcaaat 495  Q
    |||||| || |||||    
T  33227395 gagttggatccaaat 33227409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 358 - 508
Target Start/End: Complemental strand, 26037729 - 26037574
Alignment:
Q  358 tagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagac-taggaaaat--taagaga 452  Q
    ||||||||||||||||| |||  |  ||||||| | |||||| |||||||||||||| |||||||||| | ||| ||| || ||||||||   |||||||    
T  26037729 tagagagaagacctgtaaatgccgtcgtaagaagagtagatcagatggaggagagtcaggttaaaagaggcagaggaaaacctaggaaaaccataagaga 26037630  T
Q  453 aactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    |||||||| |||| |||||||||| ||||||||| || |||||||| || ||||||    
T  26037629 aactattaggaaagatttagaggtgaatgagttggatccaaatatggtttatgata 26037574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 50286981 - 50287100
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgt--tggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||| ||  | || ||||| ||||||||||||||||| |||||||   ||||||||| | ||||||| |||||||||||||  ||    
T  50286981 aaaagttggtagaaaatagacttggatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcgaatggaggagagtcaagt 50287080  T
Q  417 taaaagatgtagaagaagac 436  Q
    ||||||| ||||||||||||    
T  50287081 taaaagaggtagaagaagac 50287100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 319 - 495
Target Start/End: Original strand, 4440872 - 4441053
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||||||  | || ||||| ||| ||||||||||||| |||||||   ||||||||| | ||||||  |||||||||||||  ||    
T  4440872 aaaagttggtagaaaataggcttagatggtttgggcatctagagagaagacccgtagatgctgtggtaagaagagtagatcaaatggaggagagtcaagt 4440971  T
Q  417 taaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| ||||||||| || |||||    
T  4440972 taaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaat 4441053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 163 - 369
Target Start/End: Complemental strand, 47265620 - 47265415
Alignment:
Q  163 gtatggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatga 262  Q
    |||||||||||||| ||  |||| |||||||||||||||||||||| ||  | ||| ||||||| |||||||||  ||||| |||||||| |||| |       
T  47265620 gtatggtacaaagtattggacggttaagagtcaacacgagaatcaagtaggtgtagcaaagatgaggatgttgcgctggatgagtggtaagactagacat 47265521  T
Q  263 gataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtaga 361  Q
    ||||| ||||  ||||||||||||  | |||||||||||  ||| || || ||| | ||||| | | |||||||||| |  | |||||||| ||||||||    
T  47265520 gataagattatgaatgacaccatt--atagagagagtgggggtaacacctatagtagaaaaggtagtagaaaataggtttagatgatttgggcatgtaga 47265423  T
Q  362 gagaagac 369  Q
    ||||||||    
T  47265422 gagaagac 47265415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 317 - 508
Target Start/End: Original strand, 39708450 - 39708646
Alignment:
Q  317 ataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgg 414  Q
    ||||||||||| ||||||||||||  | || ||||  |||||| |||||||||   ||||||  |  ||||||| | |||||| |||||||||||||| |    
T  39708450 ataaaagttggtagaaaataggcttagatggtttgagcatgtatagagaagacacatagatgccgtcgtaagaagagtagatcagatggaggagagtcag 39708549  T
Q  415 gttaaaagatgtagaagaaga-ctaggaaaa--ttaagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    || |||||| ||||| ||||| |||||||||   |||||||||| ||||  ||  |||||||||| ||||||||| || |||||||| || ||||||    
T  39708550 gtcaaaagaggtagaggaagacctaggaaaactataagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgata 39708646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 382 - 509
Target Start/End: Complemental strand, 41009547 - 41009418
Alignment:
Q  382 gtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagactaggaaaa--ttaagagaaactattatgaaaaatttagaggttaa 479  Q
    |||||||||||||||| |||||||||||||| ||| |||||  ||||| ||||||  ||||||   |||||||||||||||  ||  ||||||| || ||    
T  41009547 gtaagaaaaatagatcagatggaggagagtcaggtcaaaagtggtagaggaagacctggaaaactataagagaaactattagaaatgatttagaagtcaa 41009448  T
Q  480 tgagttgaattcaaatatgattcatgatat 509  Q
    |||| || ||||||||||| || |||||||    
T  41009447 tgagatggattcaaatatggtttatgatat 41009418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 163 - 495
Target Start/End: Complemental strand, 23906719 - 23906379
Alignment:
Q  163 gtatggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatga 262  Q
    ||||||||| |||||||   ||| |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| ||||| || |||| |  |    
T  23906719 gtatggtacgaagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggcaagactagacaa 23906620  T
Q  263 gataatattaaaaatgacaccattagaaagagagag----tggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatg 357  Q
    ||||  ||||  ||||||||||||||| ||||||||    |||  |||||| || ||| | ||||||| | ||||||||||||  | || ||||  ||||    
T  23906619 gataggattaggaatgacaccattagagagagagagagagtgggggtagcacctatagtagaaaagtttgtagaaaataggcttagatggtttgagcatg 23906520  T
Q  358 tagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agaga 452  Q
    ||||||||||||  |||||||   ||||||||| | |||||   |||||||||||||  ||||||| | ||| | ||||| |||| |||| ||  |||||    
T  23906519 tagagagaagac--gtagatgccgtggtaagaagagtagattaaatggaggagagtcaagttaaaaaaggtaaatgaagacctagaaaaactattagaga 23906422  T
Q  453 aactattatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||| ||||  ||  |||||||||| ||||||||| || |||||    
T  23906421 aaccattagaaaggatttagaggtcaatgagttggatccaaat 23906379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 291 - 497
Target Start/End: Complemental strand, 39100827 - 39100616
Alignment:
Q  291 agagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg-ttggtaagaa 388  Q
    |||||||||||  |||||| || ||| | ||||||||  ||||||||||||  | || |||| |||||||||||||||| | |||||||  | |||||||    
T  39100827 agagagagtgggggtagcacctatagaagaaaagttgatagaaaataggcttagatggtttgaacatgtagagagaagatccgtagatgcgttgtaagaa 39100728  T
Q  389 aaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagtt 485  Q
     | |||||| |||||| || |||| |||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||| ||||| ||||||||    
T  39100727 gagtagatcagatggaagatagtcaggttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttggaggtcaatgagtt 39100628  T
Q  486 gaattcaaatat 497  Q
    | || |||||||    
T  39100627 ggatccaaatat 39100616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 187 - 340
Target Start/End: Original strand, 12494638 - 12494790
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| |||| |   ||||  ||||  ||||||||||||    
T  12494638 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 12494737  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggct 340  Q
    ||  |||||||||||  |||||| || ||| | ||||||||| ||||||||||||    
T  12494738 ag--agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggct 12494790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 291 - 501
Target Start/End: Complemental strand, 27450471 - 27450255
Alignment:
Q  291 agagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaaga 387  Q
    |||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||| ||||||||||||||||||| |||||||   | ||||||    
T  27450471 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggttttgacatgtagagagaagacccgtagatgccgttgtaaga 27450372  T
Q  388 aaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaat--taagagaaactattatgaaaaatttagaggttaatgagt 484  Q
    | | ||||||  |||||| ||| || |||||||||| ||| | ||||| ||| ||||||  |  ||||||| |||   ||| |||||||||| |||||||    
T  27450371 agagtagatcaaatggagtagaatcaggttaaaagaggtaaaggaagacctaagaaaatcattcgagaaaccattggaaaagatttagaggtcaatgagt 27450272  T
Q  485 tgaattcaaatatgatt 501  Q
    || || |||||||||||    
T  27450271 tggatccaaatatgatt 27450255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 318 - 436
Target Start/End: Original strand, 32479056 - 32479176
Alignment:
Q  318 taaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcggg 415  Q
    |||||||||| ||||||||||||  | || ||||||||||||||||| ||||||||||| |   | ||||||| | ||||||  ||||||||||| | ||    
T  32479056 taaaagttggtagaaaataggcttagatggtttggacatgtagagaggagacctgtagaggccgttgtaagaagagtagatcaaatggaggagagacagg 32479155  T
Q  416 ttaaaagatgtagaagaagac 436  Q
    || ||||| ||||| ||||||    
T  32479156 ttgaaagaggtagaggaagac 32479176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 446 - 485
Target Start/End: Original strand, 35690422 - 35690461
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagtt 485  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  35690422 taagagaaactattacgaaaaatttagaggttaatgagtt 35690461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 408
Target Start/End: Original strand, 1793479 - 1793570
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgt--tggtaagaaaaatagatcggatggaggag 408  Q
    ||||||||| |||||||| |||  | || |||||||||||||||||||||| ||| |||||  | ||||||| | |||||| ||||||||||    
T  1793479 aaaagttggtagaaaataagcttagatggtttggacatgtagagagaagacttgttgatgtcgtcgtaagaatagtagatcagatggaggag 1793570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 446 - 498
Target Start/End: Complemental strand, 28550586 - 28550534
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatg 498  Q
    ||||||||||||||| |||| |||||||||||||||||||  || ||||||||    
T  28550586 taagagaaactattaggaaagatttagaggttaatgagtttgatccaaatatg 28550534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 257
Target Start/End: Complemental strand, 1211805 - 1211714
Alignment:
Q  166 tggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaacta 257  Q
    ||||||| ||||||  |||| |||||| ||||||||||||||| ||| | |||   | ||| |||||||||| ||||| |||||||||||||    
T  1211805 tggtacagagtgttggacggttaagagccaacacgagaatcaagtaagtgtagcggatatgaggatgttgcactggatgagtggtaaaacta 1211714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 498
Target Start/End: Original strand, 31043224 - 31043275
Alignment:
Q  447 aagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatg 498  Q
    |||||||||||||| |||| |||||||| ||||||||||| || ||||||||    
T  31043224 aagagaaactattaggaaagatttagagattaatgagttggatccaaatatg 31043275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 355 - 486
Target Start/End: Complemental strand, 1211617 - 1211482
Alignment:
Q  355 atgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagac-taggaaaa--ttaag 449  Q
    ||||||||||||||||| ||||| |||  ||||||| | |||||| ||||||| |||||||| | ||||||  |||| |||||| ||||| ||   ||||    
T  1211617 atgtagagagaagacctatagatattgtcgtaagaagagtagatcagatggagtagagtcggatcaaaagagatagaggaagacataggagaactataag 1211518  T
Q  450 agaaactattatgaaaaatttagaggttaatgagttg 486  Q
    | ||| ||||| |||||| |||||||| |||||||||    
T  1211517 ataaattatta-gaaaaaattagaggtcaatgagttg 1211482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 446 - 508
Target Start/End: Original strand, 16003077 - 16003139
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    |||||||||| ||||  |||||||||||||| ||||||||| ||  |||||||||| ||||||    
T  16003077 taagagaaaccattagaaaaaatttagaggtcaatgagttggatctaaatatgatttatgata 16003139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 446 - 508
Target Start/End: Complemental strand, 45204970 - 45204908
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||||||||||||||| |||| |||||||| ||||| ||||| || |||||||| || ||||||    
T  45204970 taagagaaactattaggaaagatttagagtttaataagttggatccaaatatggtttatgata 45204908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 446 - 508
Target Start/End: Original strand, 51421881 - 51421943
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||||||||||||||| |||| |||||||||||||||| ||| || |||| ||| || ||||||    
T  51421881 taagagaaactattaggaaagatttagaggttaatgaattggatccaaaaatggtttatgata 51421943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 379
Target Start/End: Original strand, 28236173 - 28236262
Alignment:
Q  291 agagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgt 379  Q
    |||||||||||  |||||| || ||| | |||||||||  |||||||||||  | || ||||| |||||||||||||||| |||||||||    
T  28236173 agagagagtgggggtagcacctatagtagaaaagttggtggaaaataggcttagatggtttgggcatgtagagagaagacttgtagatgt 28236262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 446 - 507
Target Start/End: Complemental strand, 55238037 - 55237976
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgat 507  Q
    ||||||||| ||||| || | |||| || ||||||||||||||| ||||||||||| |||||    
T  55238037 taagagaaattattaggatatatttcgatgttaatgagttgaatccaaatatgatttatgat 55237976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 2e-36; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 230 - 481
Target Start/End: Complemental strand, 26885040 - 26884786
Alignment:
Q  230 atgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcat-aaaagttgg 327  Q
    ||||||| |||||| ||||||||||||| | | ||||  ||||  ||| |||||||||||||||||| | ||  |||||| || |||||  |||||||||    
T  26885040 atgttgcgttggatgagtggtaaaactagacgggataggattaggaataacaccattagaaagagagtgagg--gtagcacctatagcaggaaaagttgg 26884943  T
Q  328 aagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggttaaaagatg 425  Q
     ||||||||||||  || | |||||||||||||||| ||||  |||||||||||  ||||||| | |||||| |||||||||||||||||| |||||| |    
T  26884942 tagaaaataggcttaggcggtttggacatgtagagataagatttgtagatgttgtcgtaagaagagtagatcagatggaggagagtcgggtcaaaagagg 26884843  T
Q  426 tagaagaaga-ctaggaaaattaagagaaactattatgaaaaatttagaggttaatg 481  Q
    |||| || || ||||||||| ||||| ||||||||| |||| |||||||||||||||    
T  26884842 tagaggatgagctaggaaaactaagaaaaactattaggaaagatttagaggttaatg 26884786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 139 - 508
Target Start/End: Complemental strand, 16347820 - 16347447
Alignment:
Q  139 gacaacattcagactcacgaaatcgtatggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcat 238  Q
    ||||||| ||||||  |||| || |||||||||  |||||| | ||| |||||| |||||||||| | || ||| | |||   ||||| ||||||||| |    
T  16347820 gacaacactcagaccgacgatattgtatggtacggagtgttgagcggttaagagccaacacgagagttaagtaagtgtagcggagatgaggatgttgcgt 16347721  T
Q  239 tggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaatag 337  Q
    ||||| |||||||| |||| |  | |||  ||||||||||| ||||||||| |||||| | ||  |||||| || ||| | ||||||||| |||||||||    
T  16347720 tggatgagtggtaagactagacaatatatgattaaaaatgaaaccattagagagagagcgggg--gtagcacctatagtagaaaagttggtagaaaatag 16347623  T
Q  338 gctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga 435  Q
    |||  | || ||||||||||||||||||||||| |||||||  || | ||||| | ||||||  ||||||||||||| |||||||||| ||||| |||||    
T  16347622 gcttagatggtttggacatgtagagagaagacccgtagatgcctttgcaagaagagtagatcaaatggaggagagtcaggttaaaagaggtagaggaaga 16347523  T
Q  436 -ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
     ||||||||| ||  | |||||| ||||  ||| |||||||||| ||||| ||| || |||||||| || ||||||    
T  16347522 cctaggaaaactattaaagaaaccattagaaaagatttagaggtcaatgatttggatacaaatatggtttatgata 16347447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 187 - 495
Target Start/End: Original strand, 24178398 - 24178710
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| ||||||   ||||  ||||| ||||||||||||    
T  24178398 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactatacatgataggattaagaatgacaccatt 24178497  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    ||  |||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||| ||||||||||| |||||||   ||||    
T  24178498 ag--agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtggagagaagacccgtagatgccgtggt 24178595  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||| | |||    
T  24178596 aagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagagttcaat 24178695  T
Q  481 gagttgaattcaaat 495  Q
    |||||| || |||||    
T  24178696 gagttggatccaaat 24178710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 275 - 508
Target Start/End: Original strand, 38684943 - 38685180
Alignment:
Q  275 aatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgt 373  Q
    |||||||||||||||  ||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||||||||||||||||||||| ||    
T  38684943 aatgacaccattaga--gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgt 38685040  T
Q  374 agatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaat 468  Q
    |||||   | ||||||| | ||||||  ||||||||||||| |||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  ||    
T  38685041 agatgccgtcgtaagaagagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggat 38685140  T
Q  469 ttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    |||||||| ||||||||| || |||||||| || ||||||    
T  38685141 ttagaggtcaatgagttggatccaaatatggtttatgata 38685180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 187 - 495
Target Start/End: Complemental strand, 12492781 - 12492466
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| ||||||| | |||||| |||||||| |||| |   ||||| ||||  ||||||||||||    
T  12492781 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttacgttggatgagtggtaagactagacaggataagattaggaatgacaccatt 12492682  T
Q  287 agaaagagagagtggaagtagcatct----tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--tt 380  Q
    |||  ||||||||||  |||||| ||    ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| |||||||   |    
T  12492681 aga--gagagagtgggggtagcacctactatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgt 12492584  T
Q  381 ggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggtt 477  Q
    | |||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  ||||||||||     
T  12492583 gttaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtc 12492484  T
Q  478 aatgagttgaattcaaat 495  Q
    ||||||||| || |||||    
T  12492483 aatgagttggatccaaat 12492466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 187 - 495
Target Start/End: Complemental strand, 28977251 - 28976941
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| | ||||||  |||||| ||||||||||||| |   ||||  ||||  ||||||||||||    
T  28977251 taagagtcaacatgagaatcaagtaagtgtagcagagatgagtatgttgtgttggatgagtggtaaaactagaaatgataggattaggaatgacaccatt 28977152  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    |||    ||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||  ||||||||||||||||| ||| |||   ||||    
T  28977151 aga----gagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgtgcatgtagagagaagacccgtatatgccgtggt 28977056  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    |||||   ||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||| ||  |||||||||| |||    
T  28977055 aagaagggtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattataaaggatttagaggtcaat 28976956  T
Q  481 gagttgaattcaaat 495  Q
    |||||| || |||||    
T  28976955 gagttggatccaaat 28976941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 269 - 508
Target Start/End: Original strand, 14665680 - 14665927
Alignment:
Q  269 attaaaaatgacaccattagaaagagagag--tggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagaga 365  Q
    |||| |||||||||||||||| ||||||||  |||  |||||| || ||| | | ||||||  ||||||||||||  | || ||||||||||||||||||    
T  14665680 attagaaatgacaccattagagagagagagagtgggggtagcacctatagtagagaagttgatagaaaataggcttagatggtttggacatgtagagaga 14665779  T
Q  366 agacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactatta 460  Q
    ||||| |||||||   | ||||||| | ||||||  |||||| |||||| |||||||||| ||||| | ||| ||||||||| ||  |||||||| ||||    
T  14665780 agacccgtagatgccgtcgtaagaagagtagatcaaatggagcagagtcaggttaaaagaggtagagggagacctaggaaaactattagagaaaccatta 14665879  T
Q  461 tgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
     ||| |||||||| || ||||||||| || |||||||| || ||||||    
T  14665880 ggaagaatttagaagtcaatgagttggatccaaatatggtttatgata 14665927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 187 - 495
Target Start/End: Complemental strand, 1287983 - 1287661
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| |||| |   ||||  ||||  ||||||| ||||    
T  1287983 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacatcatt 1287884  T
Q  287 agaaagagagag--------tggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagat 377  Q
    ||| ||||||||        |||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||||  ||||||    
T  1287883 agagagagagagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacacgtagat 1287784  T
Q  378 g--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttag 472  Q
    |   ||||||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  ||||||    
T  1287783 gccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttag 1287684  T
Q  473 aggttaatgagttgaattcaaat 495  Q
    |||| ||||||||| || |||||    
T  1287683 aggtcaatgagttggatccaaat 1287661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 190 - 495
Target Start/End: Original strand, 1275156 - 1275464
Alignment:
Q  190 gagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattaga 289  Q
    ||||||||| ||||||||| |||  |||| | ||||| ||||||||| |||||| |||||||| |||| |   | ||  ||||  |||||||||||||||    
T  1275156 gagtcaacatgagaatcaagtaagcatagcagagatgaggatgttgcgttggatgagtggtaagactagacatggtaggattaggaatgacaccattaga 1275255  T
Q  290 aagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaag 386  Q
      ||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||| | ||| |||   |||||||    
T  1275256 --gagagagtggg-gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagatccgtaaatgccgtggtaag 1275352  T
Q  387 aaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgag 483  Q
    || | ||||||  |||||||||||||  ||||| ||  ||||| ||||| |||| |||| ||  |||||||| ||||| ||  |||||||||||||| ||    
T  1275353 aagagtagatcaaatggaggagagtcaagttaacaggggtagaggaagacctagaaaaactattagagaaaccattataaaggatttagaggttaatcag 1275452  T
Q  484 ttgaattcaaat 495  Q
    |||||| |||||    
T  1275453 ttgaatccaaat 1275464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 319 - 498
Target Start/End: Original strand, 3301863 - 3302047
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||||||  | || ||||||||||||||||||||||| |||||||   | || |||| |||  |||  ||||||||||||| |||    
T  3301863 aaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgttagaagaatgaatcaaatggaggagagtcaggt 3301962  T
Q  417 taaaagatgtagaagaaga-ctaggaaaa--ttaagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatg 498  Q
    ||||||| ||||| ||||| ||| |||||   | |||||||| ||||| ||| |||||||||| ||||||||| || ||||||||    
T  3301963 taaaagaggtagaggaagacctaagaaaaccattagagaaaccattataaaagatttagaggtcaatgagttggatccaaatatg 3302047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 275 - 495
Target Start/End: Original strand, 4496360 - 4496584
Alignment:
Q  275 aatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgt 373  Q
    ||||||||| |||||  ||||||||||  |||||| || ||| | ||||| ||| ||||||||||||  | || ||||| ||||||||||||||||| ||    
T  4496360 aatgacacctttaga--gagagagtgggggtagcacctatagtagaaaagctggtagaaaataggcttagatggtttgggcatgtagagagaagacccgt 4496457  T
Q  374 agatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaat 468  Q
    |||||   ||||||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  ||    
T  4496458 agatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggat 4496557  T
Q  469 ttagaggttaatgagttgaattcaaat 495  Q
    |||||||| ||||||||| || |||||    
T  4496558 ttagaggtcaatgagttggatccaaat 4496584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 187 - 495
Target Start/End: Complemental strand, 2075868 - 2075555
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| |||||| || ||| | ||| | ||||| ||||||||| |||||| ||| |||| |||| |  |||||  ||||  ||||||| ||||    
T  2075868 taagagtcaacatgagaattaagtaagtgtagcagagatgaggatgttgcgttggatgagttgtaagactagacaagataggattaggaatgacaacatt 2075769  T
Q  287 agaaagagagagtggaagtagcatctt-agcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    |||  ||||||||||  ||| || ||  || | ||||||||| ||| ||||||||  | || ||||| ||||||||||||||||| |||||||   ||||    
T  2075768 aga--gagagagtgggggtaacacctacagtagaaaagttggtagacaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggt 2075671  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaa--atttagaggtta 478  Q
    ||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| |||||| || ||  |||||||| |||| |||||  |||||||||| |    
T  2075670 aagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggataactattagagaaaccatta-gaaaaggatttagaggtca 2075572  T
Q  479 atgagttgaattcaaat 495  Q
    |||||||| || |||||    
T  2075571 atgagttggatccaaat 2075555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 319 - 489
Target Start/End: Original strand, 20456792 - 20456967
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||||||  | || |||| |||||||||||||||||| |||||||   ||||||||| | ||||||  |||||||||||||  ||    
T  20456792 aaaagttggtagaaaataggcttagatggtttgaacatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagt 20456891  T
Q  417 taaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaat 489  Q
    ||||||| ||||| ||||| ||| ||||| ||  |||||||| ||||  ||  |||||||||| ||| ||||||||    
T  20456892 taaaagaggtagaggaagacctacgaaaactattagagaaaccattagaaaggatttagaggtcaataagttgaat 20456967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 319 - 495
Target Start/End: Original strand, 10639323 - 10639502
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||||||  | ||| |||| |||||||||||||||||||||||||   ||||||||| | |||| |  ||||||  |||||  ||    
T  10639323 aaaagttggtagaaaataggcttagatgaattgggcatgtagagagaagacctgtagatgccatggtaagaagagtagaacaaatggag--gagtcaagt 10639420  T
Q  417 taaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| ||||||||| || |||||    
T  10639421 taaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaat 10639502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 358 - 495
Target Start/End: Complemental strand, 2915719 - 2915577
Alignment:
Q  358 tagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agaga 452  Q
    ||||||||||||| |||||||  |||||||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| |||||| || ||  |||||    
T  2915719 tagagagaagacccgtagatgccttggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggataactattagaga 2915620  T
Q  453 aactattatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||| ||||  ||  |||||||||| ||||||||| || |||||    
T  2915619 aaccattagaaaggatttagaggtcaatgagttggatccaaat 2915577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 446 - 501
Target Start/End: Original strand, 28033 - 28088
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgatt 501  Q
    ||||||||||||||| |||| |||||||||||||| ||||| || |||||||||||    
T  28033 taagagaaactattaggaaagatttagaggttaataagttggatccaaatatgatt 28088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 379
Target Start/End: Original strand, 34273046 - 34273106
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgt 379  Q
    ||||||||| ||||||||||||  | || ||||| ||||||||||||||||||| ||||||    
T  34273046 aaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacctgcagatgt 34273106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 298
Target Start/End: Original strand, 5305512 - 5305615
Alignment:
Q  195 aacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagag 294  Q
    ||||||||||| ||||||  |||| ||||| ||||||||||| ||||||  ||||||| |||| |  |||||  |||| |||| ||| ||||||| ||||    
T  5305512 aacacgagaataaaataagaatagcaaagacggggatgttgcgttggatgtgtggtaagactagacaagatagaattagaaataacaacattagagagag 5305611  T
Q  295 agag 298  Q
    ||||    
T  5305612 agag 5305615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 294
Target Start/End: Complemental strand, 17340823 - 17340724
Alignment:
Q  195 aacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagag 294  Q
    |||||||||||||| |||| ||| || ||||  ||||||||| |||||| ||||||||||||| | || ||   ||||  ||||||||||||||| ||||    
T  17340823 aacacgagaatcaagtaaagatattagagataaggatgttgcgttggatgagtggtaaaactagaagaaatgtgattaggaatgacaccattagagagag 17340724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 507
Target Start/End: Original strand, 36200886 - 36200941
Alignment:
Q  452 aaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgat 507  Q
    |||||||||| ||| || ||||||||||||||||| || |||||||| ||||||||    
T  36200886 aaactattataaaagatatagaggttaatgagttggatccaaatatggttcatgat 36200941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 446 - 508
Target Start/End: Original strand, 15168922 - 15168984
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||||||||||| ||| ||||||||||||||||||| ||||| || || ||||| || ||||||    
T  15168922 taagagaaactgttaggaaaaatttagaggttaataagttggatccagatatggtttatgata 15168984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 444 - 486
Target Start/End: Complemental strand, 28186908 - 28186866
Alignment:
Q  444 attaagagaaactattatgaaaaatttagaggttaatgagttg 486  Q
    ||||||||||||||||| |||| |||||||| |||||||||||    
T  28186908 attaagagaaactattaagaaagatttagagattaatgagttg 28186866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 187 - 257
Target Start/End: Original strand, 34272910 - 34272980
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaacta 257  Q
    |||||||||| | ||||||||| ||| | ||| | ||||| |||||||||||||||| |||||||| ||||    
T  34272910 taagagtcaatatgagaatcaagtaagtgtagcagagatgaggatgttgcattggatgagtggtaagacta 34272980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 10639186 - 10639255
Alignment:
Q  188 aagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaacta 257  Q
    ||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| ||||    
T  10639186 aagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagacta 10639255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 20318875 - 20318940
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaa 252  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| ||||||||    
T  20318875 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaa 20318940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 187 - 495
Target Start/End: Original strand, 31356 - 31668
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||  ||||||||| |||||| |||||||| |||| |   ||||| ||||  ||||||||||||    
T  31356 taagagtcaacatgagaatcaagtaagtgtagcagagattaggatgttgcgttggatgagtggtaagactagacaggataagattaggaatgacaccatt 31455  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    ||  |||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| |||||||   ||||    
T  31456 ag--agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccatggt 31553  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | ||||||  |||||||||||||  ||||||||||||||| ||||| | ||||||| ||  |||||||| ||||  ||  |||||||||| |||    
T  31554 aagaagagtagatcaaatggaggagagtcaagttaaaagatgtagaggaagacccaggaaaactattagagaaaccattagaaaggatttagaggtcaat 31653  T
Q  481 gagttgaattcaaat 495  Q
    |||||| || |||||    
T  31654 gagttggatccaaat 31668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 1e-33; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 163 - 444
Target Start/End: Original strand, 33072818 - 33073099
Alignment:
Q  163 gtatggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatga 262  Q
    |||||||||| ||||||   ||| |||||||||||| ||||||||||||| | ||| | |||||  |||||||| |||||| |||||||| |||| |  |    
T  33072818 gtatggtacagagtgttgggcggttaagagtcaacatgagaatcaaataagtgtagcagagatgatgatgttgcgttggatgagtggtaagactagacaa 33072917  T
Q  263 gataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtaga 361  Q
    ||||  ||||  |||||||||||||||    ||||||||  |||||| || ||| | ||||||||| ||||||||||||  | |||||||| ||||||||    
T  33072918 gataggattaggaatgacaccattaga----gagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtaga 33073013  T
Q  362 gagaagacctgtagatgt--tggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaa 444  Q
    ||||||||| ||||||||  ||||||||| | ||||||  |||||| ||||||  ||||||||| ||||| ||||| |||||||||    
T  33073014 gagaagacccgtagatgtcgtggtaagaagagtagatcaaatggagaagagtcaagttaaaagaggtagaggaagacctaggaaaa 33073099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 187 - 508
Target Start/End: Complemental strand, 12841669 - 12841344
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||  |||||| ||||||||||||| |   ||||  ||||  |||||| |||||    
T  12841669 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgtgttggatgagtggtaaaactagacatgataggattaggaatgaccccatt 12841570  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    |||  ||||||||||| |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| |||||||   ||||    
T  12841569 aga--gagagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggt 12841472  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| ||| ||||| ||  |||||||| ||||  ||  |||||||||| |||    
T  12841471 aagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaagaaaactattagagaaaccattagaaaggatttagaggtcaat 12841372  T
Q  481 gagttgaattcaaatatgattcatgata 508  Q
    |||||| || ||||| || || ||||||    
T  12841371 gagttgtatccaaatttggtttatgata 12841344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 163 - 495
Target Start/End: Original strand, 11593824 - 11594160
Alignment:
Q  163 gtatggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatga 262  Q
    |||||||||  ||||||  |||| |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| |||| |       
T  11593824 gtatggtacggagtgttggacggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacag 11593923  T
Q  263 gataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtaga 361  Q
    ||||| ||||  |||||||||||| |  |||||||||||  |||||| || ||| | ||||||||| |||||||| | |  | || ||||| ||||||||    
T  11593924 gataagattaggaatgacaccatttg--agagagagtgggggtagcacctatagtagaaaagttggtagaaaatacggttagatggtttgggcatgtaga 11594021  T
Q  362 gagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaact 456  Q
    ||||||||| |||||||   ||||||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  ||||||||     
T  11594022 gagaagacccgtagatgccatggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaacc 11594121  T
Q  457 attatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||||  ||  |||||||||| ||||||||| || |||||    
T  11594122 attagaaaggatttagaggtcaatgagttggatccaaat 11594160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 187 - 495
Target Start/End: Complemental strand, 33350200 - 33349888
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| |||| |   ||||  ||||| ||||||||||||    
T  33350200 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgccttggatgagtggtaagactagacatgataggattaagaatgacaccatt 33350101  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    |||  ||||||||||  || ||| || ||| | ||||||||  ||||||||||||  | || ||||| ||||||||||||||||| |||||||   ||||    
T  33350100 aga--gagagagtgggggttgcacctatagtagaaaagttgctagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggt 33350003  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| |||    
T  33350002 aagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaatgatttagaggtcaat 33349903  T
Q  481 gagttgaattcaaat 495  Q
    |||||| || |||||    
T  33349902 gagttggatccaaat 33349888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 187 - 495
Target Start/End: Original strand, 34869308 - 34869620
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||||| ||||| ||||||||| |||||| |||||||| |||| |   ||||  ||||  ||||||||||||    
T  34869308 taagagtcaacatgagaatcaagtaagtgtagtagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 34869407  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    ||  |||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| ||| |||   ||||    
T  34869408 ag--agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtaaatgccgtggt 34869505  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | ||||||  |||| ||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| |||    
T  34869506 aagaagagtagatccaatggtggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaat 34869605  T
Q  481 gagttgaattcaaat 495  Q
    |||||| || |||||    
T  34869606 gagttggatccaaat 34869620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 187 - 495
Target Start/End: Complemental strand, 35906595 - 35906283
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| |||| |   ||||  ||||  ||||||||||||    
T  35906595 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 35906496  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    |||  ||||||||||| |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| |||||||   ||||    
T  35906495 aga--gagagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggt 35906398  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | || |||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||| ||||| |||    
T  35906397 aagaagagtatatcatatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttcgaggtcaat 35906298  T
Q  481 gagttgaattcaaat 495  Q
    |||||| || |||||    
T  35906297 gagttggatccaaat 35906283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 187 - 495
Target Start/End: Original strand, 49029164 - 49029476
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| ||||||| | |||||| |||||||| |||| |   ||||  ||||  ||||||||||||    
T  49029164 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttacgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 49029263  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    |||  ||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| |||||||   ||||    
T  49029264 aga--gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggt 49029361  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||  ||||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| |||    
T  49029362 aagacgaatagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaat 49029461  T
Q  481 gagttgaattcaaat 495  Q
    |||||| || |||||    
T  49029462 gagttggatccaaat 49029476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 202 - 495
Target Start/End: Complemental strand, 35559373 - 35559075
Alignment:
Q  202 gaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtgg 301  Q
    ||||||| ||| | ||||||||||| ||||||||| |||||| |||||||| |  | ||  ||||  ||||  |||||||||||| ||  ||||||||||    
T  35559373 gaatcaagtaagtgtagtaaagatgaggatgttgcgttggatgagtggtaagatcagatttgataggattaggaatgacaccatttga--gagagagtgg 35559276  T
Q  302 aagtagcatctta--gcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgt--tggtaagaaaaatagatc 397  Q
      |||||| ||||  | | ||||||||| ||||||||||||  | |||||||||||| ||| |||||||||  |||||||  ||||||||| | ||||||    
T  35559275 gggtagcaccttatagtagaaaagttggtagaaaataggcttagatgatttggacatttagtgagaagacccctagatgtcgtggtaagaagagtagatc 35559176  T
Q  398 ggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaa 494  Q
      |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||| |||||||||| ||||||||| || ||||    
T  35559175 aaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaagatttagaggtcaatgagttggatccaaa 35559076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 163 - 444
Target Start/End: Original strand, 31005087 - 31005370
Alignment:
Q  163 gtatggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatga 262  Q
    |||||||||  |||||||  ||| |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| |||| |       
T  31005087 gtatggtacggagtgttaggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacag 31005186  T
Q  263 gataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtaga 361  Q
    ||||  ||||  ||| ||||||||||  |||||||||||  |||||| || ||| | ||||||||| |||||||||| |  | || ||||| ||||||||    
T  31005187 gataggattaggaataacaccattag--agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtaga 31005284  T
Q  362 gagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaa 444  Q
    ||||||||| |||||||   ||||||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| |||||||||    
T  31005285 gagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaa 31005370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 187 - 495
Target Start/End: Original strand, 37617832 - 37618145
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| |||||||||  || | ||| | ||||| ||||||||| |||||| |||||||| |||| |  |||||  ||||  ||||||||||||    
T  37617832 taagagtcaacatgagaatcaagcaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaagataggattaggaatgacaccatt 37617931  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaag-aaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttgg 382  Q
    ||  |||||||||||  |||||| || ||| | ||||||||| || ||||||||||  | || ||||| ||||||||||||||||| |||||||   |||    
T  37617932 ag--agagagagtgggggtagcacctatagtagaaaagttggtagaaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtgg 37618029  T
Q  383 taagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaa 479  Q
    |||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| ||    
T  37618030 taagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaa 37618129  T
Q  480 tgagttgaattcaaat 495  Q
    | ||||| || |||||    
T  37618130 taagttggatccaaat 37618145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 317 - 508
Target Start/End: Original strand, 43491325 - 43491521
Alignment:
Q  317 ataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgg 414  Q
    |||||| |||| ||||||||||||  | || ||||| ||||||||||||||||| |||||||   | ||||||| | | |||| |||||||||||||| |    
T  43491325 ataaaaattggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtcgtaagaagagttgatcagatggaggagagtcag 43491424  T
Q  415 gttaaaagatgtagaagaaga-ctaggaaaat--taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    || |||||| ||||| ||||| ||||||||||  |||||||||| ||||  || ||||||||||| ||| ||||| || ||||||||||| ||||||    
T  43491425 gtcaaaagaggtagaggaagacctaggaaaattataagagaaaccattagaaagaatttagaggtcaataagttggatccaaatatgatttatgata 43491521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 187 - 508
Target Start/End: Complemental strand, 13859400 - 13859077
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    ||||||| |||||||||||||| ||| ||  | | ||||| ||||||||| |||||  |||||||| |||| |   ||||  ||||  ||||||||||||    
T  13859400 taagagttaacacgagaatcaagtaagta--gcagagatgaggatgttgcgttggacgagtggtaagactagacatgataggattaggaatgacaccatt 13859303  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gt 383  Q
    |||  ||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| ||||||| ||  ||    
T  13859302 aga--gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgctgtcgt 13859205  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | ||||||  |||||||||||||  |||| |||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||  |||    
T  13859204 aagaagagtagatcaaatggaggagagtcaagttagaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggccaat 13859105  T
Q  481 gagttgaattcaaatatgattcatgata 508  Q
    |||||| || ||||| || || ||||||    
T  13859104 gagttggatccaaatttggtttatgata 13859077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 291 - 498
Target Start/End: Original strand, 43281664 - 43281877
Alignment:
Q  291 agagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaaga 387  Q
    |||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||||||||||||||||||||| |||||||   | ||||||    
T  43281664 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaaga 43281763  T
Q  388 aaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaa--ttaagagaaactattatgaaaaatttagaggttaatgagt 484  Q
    | | ||||||  ||||||||||||| |||||||||| ||||| ||||| ||| |||||   |  ||||||| ||||  ||| |||||||||| |||||||    
T  43281764 agagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagt 43281863  T
Q  485 tgaattcaaatatg 498  Q
    || || ||||||||    
T  43281864 tggatccaaatatg 43281877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 319 - 508
Target Start/End: Complemental strand, 44855435 - 44855241
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttgg--taagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| |||||||  |   |||||| | ||||||  |||||||||||||  ||    
T  44855435 aaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtcataagaagagtagatcaaatggaggagagtcaagt 44855336  T
Q  417 taaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||| |||||||||| ||||||||| || ||||| || || ||||||    
T  44855335 taaaagaagtagaggaagacctaggaaaactattagagaaaccattagaaaagatttagaggtcaatgagttggatccaaatttggtttatgata 44855241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 319 - 508
Target Start/End: Complemental strand, 2885985 - 2885791
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||||||  | || ||||| ||||||||||||||| | |||||||  |  ||| ||| | |||||| |||||||||||||| |||    
T  2885985 aaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagatccgtagatgccgttgtacgaagagtagatcagatggaggagagtcaggt 2885886  T
Q  417 taaaagatgtagaagaaga-ctaggaaaa--ttaagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
     |||||| ||||||||||| |||||||||   |||||||||| ||||  ||  |||||| ||| ||||||||| |  |||||||| || ||||||    
T  2885885 caaaagaggtagaagaagacctaggaaaactataagagaaaccattagaaatgatttagtggtcaatgagttggacccaaatatggtttatgata 2885791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 222 - 495
Target Start/End: Complemental strand, 39906729 - 39906454
Alignment:
Q  222 agatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataa 320  Q
    ||||| ||||| ||| |||||| |||||||| |||| |   ||||  ||||  ||||||||||||||| |||||| | ||  |||||| || ||| | ||    
T  39906729 agatgaggatgctgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtgagg--gtagcacctatagtagaa 39906632  T
Q  321 aagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgt--tggtaagaaaaatagatcggatggaggagagtcgggtta 418  Q
    ||||||| ||||||||||||  | |||||||| |||||||||||||||||  |||||||  ||||||||| | ||||||  ||||||  |||||  ||||    
T  39906631 aagttggtagaaaataggcttagatgatttgggcatgtagagagaagacccatagatgtcgtggtaagaagagtagatcaaatggag--gagtcaagtta 39906534  T
Q  419 aaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| ||||| ||| || |||||    
T  39906533 aaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgacttggatccaaat 39906454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 446 - 504
Target Start/End: Original strand, 18795838 - 18795896
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcat 504  Q
    ||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||    
T  18795838 taagagaaactattcgaaaagatttagaggttaatgagttgaattcaaatatgattcat 18795896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 222 - 378
Target Start/End: Complemental strand, 45836839 - 45836684
Alignment:
Q  222 agatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataa 320  Q
    ||||| |||||||||  ||||| |||||||| | || |  |||||  ||||  |||||||||||||||  ||||||||||  |||||| || ||| | ||    
T  45836839 agatgaggatgttgcgctggatgagtggtaagagtagacaagataggattaggaatgacaccattaga--gagagagtgggggtagcacctatagtagaa 45836742  T
Q  321 aagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg 378  Q
    ||||||| ||||||||||||  | || ||||||||||||||||||||||| |||||||    
T  45836741 aagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatg 45836684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 275 - 495
Target Start/End: Original strand, 6374844 - 6375068
Alignment:
Q  275 aatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgt 373  Q
    |||||||||||||||  ||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||  ||||||||||||||||| ||    
T  6374844 aatgacaccattaga--gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgagcatgtagagagaagaccagt 6374941  T
Q  374 agatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaat 468  Q
    |||||   |||||||||   ||||||  ||| |||||| ||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  || |||    
T  6374942 agatgctgtggtaagaagggtagatcaaatgtaggagaatcaagttaaaagaggtagaggaagatctaggaaaactattagagaaaccattagaaagaat 6375041  T
Q  469 ttagaggttaatgagttgaattcaaat 495  Q
    |||||||| | ||||||| || |||||    
T  6375042 ttagaggtcagtgagttggatccaaat 6375068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 319 - 423
Target Start/End: Original strand, 29650403 - 29650509
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    |||| |||| ||||||||||||  | || ||||||||||||||||||||||| |||||||   | ||||||| | ||||||  ||||||||||||| |||    
T  29650403 aaaaattggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaagaagagtagatcaaatggaggagagtcaggt 29650502  T
Q  417 taaaaga 423  Q
    |||||||    
T  29650503 taaaaga 29650509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 449 - 508
Target Start/End: Original strand, 35922407 - 35922466
Alignment:
Q  449 gagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    |||||||||||| |||| |||||||||||||||||||||||  |||||||||| ||||||    
T  35922407 gagaaactattaagaaagatttagaggttaatgagttgaatctaaatatgatttatgata 35922466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 446 - 508
Target Start/End: Complemental strand, 9210835 - 9210773
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||||||||||| ||| ||||||||||||||||||||||||| || |||||||| || ||||||    
T  9210835 taagagaaacttttaggaaaaatttagaggttaatgagttggatccaaatatggtttatgata 9210773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 392 - 509
Target Start/End: Original strand, 7273194 - 7273314
Alignment:
Q  392 tagatcggatggaggagagtcgggttaaaagatgtagaagaagac-taggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaa 488  Q
    ||||| ||||||||||||||| ||| |||||| ||||| |||||| || ||||| ||  |||||||| ||||  ||| ||| |||||| ||||||||| |    
T  7273194 tagattggatggaggagagtcaggtcaaaagaggtagaggaagacctatgaaaactataagagaaaccattagaaaatattcagaggtcaatgagttgga 7273293  T
Q  489 ttcaaatatgattcatgatat 509  Q
    |||||||||| || |||||||    
T  7273294 ttcaaatatggtttatgatat 7273314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 319 - 444
Target Start/End: Original strand, 22349639 - 22349767
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgt--tggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||||||  | || ||| | ||||||||||||||||| |||  |||  ||||||||| | ||||||  |||||||||||||  ||    
T  22349639 aaaagttggtagaaaataggcttagatggttttggcatgtagagagaagacccgtaattgtcatggtaagaagagtagatcaaatggaggagagtcaagt 22349738  T
Q  417 taaaagatgtagaagaag-actaggaaaa 444  Q
    ||||||| ||||| |||| ||||||||||    
T  22349739 taaaagaggtagaggaagaactaggaaaa 22349767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 319 - 429
Target Start/End: Complemental strand, 46356119 - 46356007
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgt--tggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| |||||||||| |  | || ||||| ||||||||||||||||  ||||||||  ||||||||| | ||||||  |||||||||||||  ||    
T  46356119 aaaagttggtagaaaataggtttagatggtttgggcatgtagagagaagacacgtagatgttgtggtaagaagagtagatcaaatggaggagagtcaagt 46356020  T
Q  417 taaaagatgtaga 429  Q
    ||||||| |||||    
T  46356019 taaaagaggtaga 46356007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 508
Target Start/End: Original strand, 14057629 - 14057691
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||||||||||||||| |||| ||||||||||||||| |||  ||||||||||| || ||||||    
T  14057629 taagagaaactattaggaaagatttagaggttaatgcgttcgattcaaatatggtttatgata 14057691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 508
Target Start/End: Original strand, 14367657 - 14367719
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||||||||||||||| |||| ||||||||||||||| |||  ||||||||||| || ||||||    
T  14367657 taagagaaactattaggaaagatttagaggttaatgcgttcgattcaaatatggtttatgata 14367719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 275 - 508
Target Start/End: Original strand, 36136740 - 36136977
Alignment:
Q  275 aatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgt 373  Q
    |||||||||||||||  |||||||| |  |||||| || ||| | ||||| ||| ||||||||| ||  |||  ||||| ||| ||||||||| |||| |    
T  36136740 aatgacaccattaga--gagagagttggggtagcacctatagtagaaaagatggtagaaaatagtcttaggttgtttgggcatatagagagaatacctat 36136837  T
Q  374 agatgttg--gtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagac-taggaaaatta--agagaaactattatgaaaaat 468  Q
    ||||||||  ||| ||| |  ||||| |||||||||||||| | | | |||| ||||| |||||| ||| |||| ||  ||||||||||||  |||| ||    
T  36136838 agatgttgtagtacgaagagcagatcagatggaggagagtcagatcagaagaagtagaggaagacctagaaaaactataagagaaactatttggaaagat 36136937  T
Q  469 ttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||||| |||||||| ||| || |||||||| || ||||||    
T  36136938 ttagatgttaatgaattggatccaaatatggtttatgata 36136977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 508
Target Start/End: Complemental strand, 36239927 - 36239865
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||||||||||||||| ||||||||||||| |||| |||||| || |||||||| || ||||||    
T  36239927 taagagaaactattaggaaaaatttagagattaacgagttggatccaaatatgctttatgata 36239865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 290 - 378
Target Start/End: Original strand, 38606993 - 38607082
Alignment:
Q  290 aagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg 378  Q
    ||||||||||||  |||||| || ||| | ||| ||||| ||||||||||||  | || ||||||||||||||||||||||| |||||||    
T  38606993 aagagagagtgggggtagcacctatagtagaaaggttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatg 38607082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 415 - 508
Target Start/End: Complemental strand, 40980093 - 40979997
Alignment:
Q  415 gttaaaagatgtagaagaagac-taggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||||||||| ||||| |||||| |||||||| ||  |||||||||||||  ||| |||||||||| ||||||||| || |||||||| || ||||||    
T  40980093 gttaaaagaggtagaggaagacctaggaaaactataagagaaactattagaaaagatttagaggtcaatgagttggatccaaatatggtttatgata 40979997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 378
Target Start/End: Original strand, 7273058 - 7273117
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg 378  Q
    ||||||||| ||||||||||||  | || ||||| |||||| ||||||||||||||||||    
T  7273058 aaaagttggtagaaaataggcttagatggtttgggcatgtacagagaagacctgtagatg 7273117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 509
Target Start/End: Complemental strand, 21517511 - 21517448
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgatat 509  Q
    |||||||||||||||  ||| |||||||| ||||| ||||| || ||||||||||| |||||||    
T  21517511 taagagaaactattaaaaaatatttagagattaataagttggatccaaatatgatttatgatat 21517448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 501
Target Start/End: Complemental strand, 24598385 - 24598263
Alignment:
Q  382 gtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagac-taggaaaattaa--gagaaactattatgaaaaatttagaggtta 478  Q
    ||||||| | ||||||  ||| ||| ||||| |||||||||| ||||| |||||| || |||||| |   ||||||| ||||  ||| |||||||||| |    
T  24598385 gtaagaagagtagatcaaatgaaggtgagtcaggttaaaagaggtagaggaagacctaagaaaatcattcgagaaaccattagaaaagatttagaggtca 24598286  T
Q  479 atgagttgaattcaaatatgatt 501  Q
    ||||||||||| |||||||||||    
T  24598285 atgagttgaatccaaatatgatt 24598263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 495
Target Start/End: Original strand, 36652011 - 36652192
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||||||  | || |||   ||||||||||||||||| |||||||   ||||||||| | ||||||  || ||||| ||||  ||    
T  36652011 aaaagttggtagaaaataggcttagatggtttcagcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatagaggatagtcaagt 36652110  T
Q  417 taaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||||||| ||||| ||||| ||| ||||| ||  |||||||| ||||  ||  ||| |||||| |||||||||||| |||||    
T  36652111 taaaagaggtagaggaagacctaagaaaactattagagaaaccattagaaaggattcagaggtcaatgagttgaatccaaat 36652192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 446 - 508
Target Start/End: Complemental strand, 28628064 - 28628002
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||||||||||||||| |||| |||||||| ||||||||||| || ||||| || || ||||||    
T  28628064 taagagaaactattaggaaagatttagagattaatgagttggatgcaaatgtggtttatgata 28628002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 446 - 508
Target Start/End: Original strand, 37976386 - 37976448
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    |||| ||||||| ||||||| |||||||| ||||||||||| || |||||||| || ||||||    
T  37976386 taagtgaaactaatatgaaagatttagagattaatgagttggatccaaatatggtttatgata 37976448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 356 - 482
Target Start/End: Original strand, 1011103 - 1011234
Alignment:
Q  356 tgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--aga 450  Q
    |||||||||||||| | |||||||||  ||| ||| | |||||| |||  ||||||||| | | |||||| ||||| ||||| |||| |||||||  |||    
T  1011103 tgtagagagaagacatctagatgttgtagtacgaagagtagatcagataaaggagagtcagatcaaaagaggtagaggaagacctagaaaaattatgaga 1011202  T
Q  451 gaaactattatgaaaaatttagaggttaatga 482  Q
    |||| ||||| |||| ||||| ||||||||||    
T  1011203 gaaattattaggaaatatttaaaggttaatga 1011234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 383 - 447
Target Start/End: Original strand, 23404502 - 23404567
Alignment:
Q  383 taagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta 447  Q
    |||||| | ||||||  ||||||||||||| ||| |||||| ||||||||||| ||||||||||||    
T  23404502 taagaagagtagatcaaatggaggagagtcaggtcaaaagaggtagaagaagacctaggaaaatta 23404567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 370
Target Start/End: Complemental strand, 46014498 - 46014393
Alignment:
Q  263 gataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtaga 361  Q
    ||||| |||| ||||||||||||||||  ||||||||||  || ||| || ||| | ||||||||| ||||||||||||  | ||  |||||||||||||    
T  46014498 gataagattagaaatgacaccattaga--gagagagtgggggttgcacctatagtagaaaagttggtagaaaataggcttagatg-gttggacatgtaga 46014402  T
Q  362 gagaagacc 370  Q
    |||||||||    
T  46014401 gagaagacc 46014393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 1e-33; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 187 - 495
Target Start/End: Original strand, 1210633 - 1210945
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| |||| |   ||||  ||||  ||||||||||||    
T  1210633 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 1210732  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    |||  ||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| |||||||   ||||    
T  1210733 aga--gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggt 1210830  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| |||    
T  1210831 aagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaat 1210930  T
Q  481 gagttgaattcaaat 495  Q
    |||||| || |||||    
T  1210931 gagttggatccaaat 1210945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 163 - 495
Target Start/End: Complemental strand, 49347811 - 49347475
Alignment:
Q  163 gtatggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatga 262  Q
    ||||||||| |||||||   ||| |||||||||||| ||||||||| ||| | ||| ||||||| ||||||||| |||||| |||||||| |||| |       
T  49347811 gtatggtacgaagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcaaagatgaggatgttgcgttggatgagtggtaagactagacag 49347712  T
Q  263 gataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtaga 361  Q
    ||||  ||||  |||||||||||| |  ||||||||| |  ||||||||| ||| | ||||||||| ||||||||||||  | || ||||| |||| |||    
T  49347711 gataggattaggaatgacaccattgg--agagagagtaggggtagcatctatagtagaaaagttggtagaaaataggcttagatggtttggtcatgcaga 49347614  T
Q  362 gagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaact 456  Q
    ||||||||| |||||||   ||||||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  ||||||||     
T  49347613 gagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaacc 49347514  T
Q  457 attatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||||  ||  |||||||||| ||||||||| || |||||    
T  49347513 attagaaaggatttagaggtcaatgagttggatccaaat 49347475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 187 - 495
Target Start/End: Original strand, 22089982 - 22090296
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| ||||| ||  |||||| |||||||| |||| |   ||||  ||||  ||||||||||||    
T  22089982 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgctgtgttggatgagtggtaagactagacaggataggattatgaatgacaccatt 22090081  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    ||| |||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||| ||||||||| |||||||   ||||    
T  22090082 agagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagggagaagacccgtagatgccgtggt 22090181  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||||| ||||||  |||||||||||||  ||||||||  ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| |||    
T  22090182 aagaaaagtagatcaaatggaggagagtcaagttaaaaggggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaat 22090281  T
Q  481 gagttgaattcaaat 495  Q
    |||||| || |||||    
T  22090282 gagttggatccaaat 22090296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 166 - 495
Target Start/End: Complemental strand, 30202545 - 30202212
Alignment:
Q  166 tggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagat 265  Q
    ||||||| ||||||   ||| |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| |||| |   |||    
T  30202545 tggtacagagtgttgggcggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgat 30202446  T
Q  266 aatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagag 364  Q
    |  ||||  ||||||||||||||  |||||||||||  |||||| || ||| | ||| ||||| ||||||||||||  | || ||||| |||||||||||    
T  30202445 aggattaggaatgacaccattag--agagagagtgggggtagcacctatagtagaaaggttggtagaaaataggcttagatggtttggtcatgtagagag 30202348  T
Q  365 aagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactatt 459  Q
    |||||| |||||||   ||||||||| | ||||||  ||||| |||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| |||    
T  30202347 aagacccgtagatgccgtggtaagaagagtagatcaaatggacgagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccatt 30202248  T
Q  460 atgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    |  ||  |||||||||| ||||||||| || |||||    
T  30202247 agaaaggatttagaggtcaatgagttggatccaaat 30202212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 163 - 495
Target Start/End: Original strand, 8671784 - 8672118
Alignment:
Q  163 gtatggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatga 262  Q
    ||||||||| || ||||  |||| |||||||||||| ||||||||| ||| | ||| | ||||  ||||||||| |||||| |||||||| |||| |       
T  8671784 gtatggtacgaaatgttggacggttaagagtcaacatgagaatcaagtaagtgtagcagagataaggatgttgcgttggatgagtggtaagactagacat 8671883  T
Q  263 gataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtaga 361  Q
    ||||  ||||  |||||||||||||||    ||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||    
T  8671884 gataggattaggaatgacaccattaga----gagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtaga 8671979  T
Q  362 gagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaact 456  Q
    ||||||| | |||||||   ||||||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  ||||||||     
T  8671980 gagaagatccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaacc 8672079  T
Q  457 attatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||||  ||  |||||||||| ||||||||| || |||||    
T  8672080 attagaaaggatttagaggtcaatgagttggatccaaat 8672118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 187 - 444
Target Start/End: Original strand, 51601946 - 51602203
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||||| | ||| ||||||||| || ||| |||||||| |||| |   ||||  ||||  ||||||||||||    
T  51601946 taagagtcaacatgagaatcaagtaagtgtagtagatatgaggatgttgcgttagatgagtggtaagactagacatgatatgattaggaatgacaccatt 51602045  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgt--tggt 383  Q
    ||| |||| ||| |    ||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| ||||||||  ||||    
T  51602046 agagagagtgaggg----tagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgtcgtggt 51602141  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaa 444  Q
    ||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| |||||||||    
T  51602142 aagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaa 51602203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 187 - 485
Target Start/End: Original strand, 9592622 - 9592924
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    ||||| |||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| |||| |   ||||  ||||  ||||||||||||    
T  9592622 taagaatcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 9592721  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgt--tggt 383  Q
    |||  ||||||||||  |||||| || ||| | ||||||| | ||||||||||||  | ||  |||| ||||||||||||||||| |||||||   ||||    
T  9592722 aga--gagagagtgggggtagcacctatagtagaaaagtttgtagaaaataggcttagatgggttgggcatgtagagagaagacccgtagatgccgtggt 9592819  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||  ||  |||||||| ||||  ||  |||||||||| |||    
T  9592820 aagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaacctattagagaaaccattagaaatgatttagaggtcaat 9592919  T
Q  481 gagtt 485  Q
    |||||    
T  9592920 gagtt 9592924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 187 - 508
Target Start/End: Complemental strand, 34792742 - 34792418
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    ||||||||||||||||||||||  || | ||| | ||||| |||||||||  ||||| |||||||| |||| |   ||||  ||||  ||||| ||||||    
T  34792742 taagagtcaacacgagaatcaag-aagtgtagcagagatgaggatgttgcgctggatgagtggtaagactagacatgataggattaggaatgaaaccatt 34792644  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    |||  ||||||||||  |||||| || ||| | ||||||||| ||||| ||||||  | || ||||| ||||||||||||||||| |||||||   ||||    
T  34792643 aga--gagagagtgggggtagcacctatagtagaaaagttggtagaaagtaggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggt 34792546  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  ||||| |||| |||    
T  34792545 aagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttaaaggtcaat 34792446  T
Q  481 gagttgaattcaaatatgattcatgata 508  Q
    |||||| || ||||| || || ||||||    
T  34792445 gagttggatccaaatttggtttatgata 34792418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 275 - 498
Target Start/End: Complemental strand, 4001761 - 4001534
Alignment:
Q  275 aatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgt 373  Q
    |||||||||||||||  ||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||||||||||||||| ||||| ||    
T  4001761 aatgacaccattaga--gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagaggagacccgt 4001664  T
Q  374 agatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaa--ttaagagaaactattatgaaaaat 468  Q
    |||||   | ||||||| | ||||||  ||||||||||||| |||||||||| ||||| ||||| ||| |||||   |  ||||||| ||||  ||| ||    
T  4001663 agatgccgttgtaagaagagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaaccattcgagaaaccattaaaaaagat 4001564  T
Q  469 ttagaggttaatgagttgaattcaaatatg 498  Q
    |||||||| ||||||||| || ||||||||    
T  4001563 ttagaggtcaatgagttggatccaaatatg 4001534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 187 - 486
Target Start/End: Complemental strand, 32231348 - 32231045
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||| ||||||||||||||||| ||| | ||||| ||||| |||||||||  | ||| |||||||| | || |   ||||  ||||  ||||||||||||    
T  32231348 taagggtcaacacgagaatcaagtaagtgtagtagagatgaggatgttgcgctagatgagtggtaagattagacatgataggattaggaatgacaccatt 32231249  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    |||  ||||||||||  |||||| || ||| | |||| |||| ||||||||||||  | || ||||| |||||||||||||||| ||||||||   |  |    
T  32231248 aga--gagagagtgggggtagcacctatagtagaaaaattggtagaaaataggcttagatggtttgggcatgtagagagaagacttgtagatgccgtcat 32231151  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| |||    
T  32231150 aagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaat 32231051  T
Q  481 gagttg 486  Q
    ||||||    
T  32231050 gagttg 32231045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 222 - 436
Target Start/End: Original strand, 696192 - 696407
Alignment:
Q  222 agatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataa 320  Q
    ||||| |||||||||  ||||| |||||||| |||| |   ||||  ||||  |||||||||||||||  ||||||||||  |||||| || ||| | ||    
T  696192 agatgaggatgttgcgctggatgagtggtaagactagacaggataggattaggaatgacaccattaga--gagagagtgggggtagcacctatagtagaa 696289  T
Q  321 aagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggtta 418  Q
    ||||||| ||||||||||||  | ||  |||||||||||||||||||||| |||||||  |  ||||||| | ||||||  ||||||||||||| |||||    
T  696290 aagttggtagaaaataggcttagatggcttggacatgtagagagaagacccgtagatgccgttgtaagaagagtagatcatatggaggagagtcaggtta 696389  T
Q  419 aaagatgtagaagaagac 436  Q
    ||||| ||||| ||||||    
T  696390 aaagaggtagaggaagac 696407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 187 - 444
Target Start/End: Complemental strand, 43240775 - 43240514
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| |||| |   ||||  ||||  |||||| |||||    
T  43240775 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattatgaatgacgccatt 43240676  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgt--tggt 383  Q
    ||| |||||||||||  |||||| || ||| | |||| |||  ||||||||||||  | |  ||||  ||||||||||||||||| ||||||||  ||||    
T  43240675 agagagagagagtgggggtagcacctatagtagaaaaattgatagaaaataggcttagatagtttgagcatgtagagagaagacccgtagatgttgtggt 43240576  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaa 444  Q
    ||||| | ||||||  ||||||||||||   ||||||| | ||||| ||||| |||||||||    
T  43240575 aagaagagtagatcaaatggaggagagttaagttaaaaaaggtagaggaagacctaggaaaa 43240514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 321 - 495
Target Start/End: Original strand, 4029143 - 4029322
Alignment:
Q  321 aagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgt--tggtaagaaaaatagatcggatggaggagagtcgggtta 418  Q
    ||||||| ||||||||||||  |  | ||||||||||||||||||||||| |||||||   ||||||||| ||||||||  |||||||||||||  ||||    
T  4029143 aagttggtagaaaataggcttagaaggtttggacatgtagagagaagacccgtagatgccgtggtaagaagaatagatcaaatggaggagagtcaagtta 4029242  T
Q  419 aaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  ||||| |||| ||||||||| || |||||    
T  4029243 aaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttaaaggtcaatgagttggatccaaat 4029322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 187 - 495
Target Start/End: Complemental strand, 51441159 - 51440847
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| | | | ||| | ||||| |||||||||||||||  |||||||| |||| |   ||||  ||||  ||||||||||||    
T  51441159 taagagtcaacatgagaatcaagtgagtgtagcagagatgaggatgttgcattggacgagtggtaagactagacatgataggattaggaatgacaccatt 51441060  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    |||  ||||||||||  ||| || || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| | |||||   ||||    
T  51441059 aga--gagagagtgggggtaacacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccggagatgccgtggt 51440962  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | |||| |  |||||||||||||  |||||| || ||||| ||||| ||||||||| ||  |||||||| ||||  ||  ||||| |||| |||    
T  51440961 aagaagagtagagcaaatggaggagagtcaagttaaaggaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttataggtcaat 51440862  T
Q  481 gagttgaattcaaat 495  Q
    |||||| || |||||    
T  51440861 gagttggatccaaat 51440847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 319 - 508
Target Start/End: Complemental strand, 25979494 - 25979300
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||| | ||||| ||||||  | || ||||||||||||||||||||||| ||||||| ||  ||||| | | ||||||| ||||||||||||| |||    
T  25979494 aaaagttagtagaaactaggcttagatggtttggacatgtagagagaagacccgtagatgctgttgtaaggagagtagatcgaatggaggagagtcaggt 25979395  T
Q  417 taaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||||||| ||||| ||||| | | ||||| ||  |||||||| ||||  ||  |||||||||| ||||||||| || |||||||| || ||||||    
T  25979394 taaaagaggtagaggaagacccatgaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgata 25979300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 330 - 498
Target Start/End: Complemental strand, 52561841 - 52561668
Alignment:
Q  330 gaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggttaaaagatgta 427  Q
    |||||||||||  |||| ||| | |||||||||||||||||  |||||||||  ||| ||| | |||||| |||||||||||||  | ||| |||| |||    
T  52561841 gaaaataggcttaggtggtttcggcatgtagagagaagaccgatagatgttgcagtacgaagagtagatcagatggaggagagttagattagaagaggta 52561742  T
Q  428 gaagaagactaggaaaat---taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatg 498  Q
    || |||||||  |||||    ||||||||||| ||| |||| |||||||||||||||||||| || ||||||||    
T  52561741 gaggaagacttagaaaaactataagagaaactgttaggaaagatttagaggttaatgagttggatccaaatatg 52561668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 222 - 436
Target Start/End: Original strand, 15085857 - 15086072
Alignment:
Q  222 agatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataa 320  Q
    ||||| |||||||||  ||||  |||||||| |||| ||  ||||  ||||  |||||||||||||||  ||||||||||  |||||| || ||| | ||    
T  15085857 agatgaggatgttgcgctggacgagtggtaagactagataggataggattaggaatgacaccattaga--gagagagtgggggtagcacctatagtagaa 15085954  T
Q  321 aagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggtta 418  Q
    ||||||| ||||||||||||  | || ||||||||||||||||||||||| |||||||   | || |||| | ||||||  ||||||||||||| | |||    
T  15085955 aagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgttagaagagtagatcaaatggaggagagtcagatta 15086054  T
Q  419 aaagatgtagaagaagac 436  Q
    ||||| ||||| ||||||    
T  15086055 aaagaggtagaggaagac 15086072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 275 - 436
Target Start/End: Complemental strand, 32083051 - 32082889
Alignment:
Q  275 aatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgt 373  Q
    |||||||||||||||  ||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || |||||||||| |||||| ||||| ||    
T  32083051 aatgacaccattaga--gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgcagagaggagacccgt 32082954  T
Q  374 agatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagac 436  Q
    |||||   | ||||||| | ||||||  ||||||||||||| |||||||||| ||||| ||||||    
T  32082953 agatgccgttgtaagaagagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagac 32082889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 343 - 498
Target Start/End: Original strand, 39140563 - 39140718
Alignment:
Q  343 ggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagactagg 440  Q
    |||| ||||| |||||||||||||||||  || ||||||  ||| ||| | |||||| |||||| ||||||| | ||| |||| ||||| |||  |||      
T  39140563 ggtggtttgggcatgtagagagaagaccgatacatgttgtagtacgaagagtagatcagatggatgagagtcagattagaagaggtagaggaa--ctaaa 39140660  T
Q  441 aaaattaagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatg 498  Q
    ||| ||| |||||||||||| ||||||||||||||||||| ||||| || ||||||||    
T  39140661 aaagttatgagaaactattaggaaaaatttagaggttaattagttggatccaaatatg 39140718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 393 - 508
Target Start/End: Original strand, 39318224 - 39318342
Alignment:
Q  393 agatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaa--ttaagagaaactattatgaaaaatttagaggttaatgagttgaat 489  Q
    ||||| |||||||||||||||||| |||||| ||||| ||||| |||||||||   |||||||||| ||||  ||  |||||||||| ||||||||| ||    
T  39318224 agatcagatggaggagagtcgggtcaaaagaggtagaggaagacctaggaaaactataagagaaaccattagaaaggatttagaggtcaatgagttggat 39318323  T
Q  490 tcaaatatgattcatgata 508  Q
     |||||||| || ||||||    
T  39318324 ccaaatatggtttatgata 39318342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 378
Target Start/End: Original strand, 8391637 - 8391850
Alignment:
Q  164 tatggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgag 263  Q
    ||||||||| ||||||   ||| ||||||||||||||||| | || ||| | |||   |||||  |||||||  |||||| |||||||| |||| |  ||    
T  8391637 tatggtacagagtgttgggcggttaagagtcaacacgagagtaaagtaagtgtagcggagatgaagatgttgtgttggatgagtggtaagactacacaag 8391736  T
Q  264 ataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagag 362  Q
    |||  ||||  |||||||||||||||  ||||||||||  |||||| || ||| | ||||||||| |||||||||| |  | |  |||||||||||||||    
T  8391737 ataggattaggaatgacaccattaga--gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggtttagattgtttggacatgtagag 8391834  T
Q  363 agaagacctgtagatg 378  Q
    || ||||| |||||||    
T  8391835 aggagacccgtagatg 8391850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 497
Target Start/End: Complemental strand, 18469316 - 18469162
Alignment:
Q  348 tttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagact-aggaaaa 444  Q
    ||||||||| ||| ||||||||  ||||||||||  ||| ||| | || ||| ||||||| |||||||| | |||||| ||||| ||||||| || ||||    
T  18469316 tttggacatatagtgagaagactggtagatgttgtagtacgaagagtaaatcagatggagaagagtcggatcaaaagaggtagatgaagacttagaaaaa 18469217  T
Q  445 tta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaatat 497  Q
    |||  ||||||||| ||| |||| ||| |||||| ||||||||| || |||||||    
T  18469216 ttataagagaaacttttaggaaatattaagaggtcaatgagttggatacaaatat 18469162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 446 - 486
Target Start/End: Original strand, 26299236 - 26299276
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttg 486  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  26299236 taagagaaactattatgaaagatttagaggttaatgagttg 26299276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 436 - 508
Target Start/End: Complemental strand, 12930454 - 12930380
Alignment:
Q  436 ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||||||||||||  ||||||| |||||||||||||||| || ||| ||||||| || ||||||||||| ||||||    
T  12930454 ctaggaaaattataagagaaattattatgaaaaatttaaagattagtgagttggatccaaatatgatttatgata 12930380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 508
Target Start/End: Complemental strand, 27520338 - 27520276
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    |||||||||||||||  |||||||||||| |||||||| || || ||||||||||| ||||||    
T  27520338 taagagaaactattagaaaaaatttagagattaatgagctggatccaaatatgatttatgata 27520276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 320 - 502
Target Start/End: Complemental strand, 34827366 - 34827178
Alignment:
Q  320 aaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggtt 417  Q
    |||| ||| |||||||||||| |  || |||||||||||| ||||||||||  |||||| |   ||||||||| |||||  |||||||||||||  ||||    
T  34827366 aaagatggtagaaaataggcttctttggtttggacatgtaaagagaagaccgatagatgctctagtaagaaaagtagattagatggaggagagtaaggtt 34827267  T
Q  418 aaaagatgtagaagaagac-taggaaaatta--agagaaactattatgaaaaatttagagg-ttaatgagttgaattcaaatatgattc 502  Q
    | || |  || | |||||| ||| |||| ||  |||||||||||||  ||| ||||||||| ||||| |||||||| ||||||||||||    
T  34827266 agaaaaaataaaggaagacctagaaaaactataagagaaactattagaaaagatttagaggtttaatcagttgaatccaaatatgattc 34827178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 446 - 507
Target Start/End: Complemental strand, 3818987 - 3818926
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgat 507  Q
    ||||||||||||||| |||| |||||||| ||||||||||||||  ||||||| || |||||    
T  3818987 taagagaaactattaagaaagatttagagattaatgagttgaatagaaatatggtttatgat 3818926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 509
Target Start/End: Complemental strand, 32404657 - 32404594
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgatat 509  Q
    ||||||||||||||| |||| |||||||| |||||||||| ||| |||| ||| || |||||||    
T  32404657 taagagaaactattaggaaagatttagagattaatgagttaaatccaaacatggtttatgatat 32404594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 330 - 377
Target Start/End: Complemental strand, 32404778 - 32404731
Alignment:
Q  330 gaaaataggctccggtgatttggacatgtagagagaagacctgtagat 377  Q
    |||||||||||  |||| |||||| |||||||||||||||||||||||    
T  32404778 gaaaataggcttaggtggtttggatatgtagagagaagacctgtagat 32404731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 418 - 496
Target Start/End: Complemental strand, 46226451 - 46226370
Alignment:
Q  418 aaaagatgtagaagaagactaggaaaat---taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaata 496  Q
    |||||| |||||||||||||  |||||    |||| ||||||||||||||| ||||| |||||||||||||| ||| |||||    
T  46226451 aaaagaggtagaagaagacttagaaaaaccataagtgaaactattatgaaatatttataggttaatgagttgcatttaaata 46226370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 497
Target Start/End: Complemental strand, 52739642 - 52739591
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatat 497  Q
    ||||||||||||||| |||| ||||  ||||||||||||||||| |||||||    
T  52739642 taagagaaactattaggaaagatttttaggttaatgagttgaatccaaatat 52739591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 446 - 508
Target Start/End: Original strand, 29128934 - 29128996
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||||||||||||||| |||| |||||||||||||  ||||| || |||||||| || ||||||    
T  29128934 taagagaaactattaggaaagatttagaggttaacaagttggatccaaatatggtttatgata 29128996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 446 - 508
Target Start/End: Complemental strand, 52878430 - 52878368
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    |||||| || |||||| ||| ||||||||||||||||||||||| ||| || |||| ||||||    
T  52878430 taagagtaattattataaaagatttagaggttaatgagttgaatccaactacgatttatgata 52878368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 485
Target Start/End: Complemental strand, 9599582 - 9599486
Alignment:
Q  392 tagatcggatggaggagagtcgggttaaaagatgtagaagaagac-taggaaaatta--agagaaactattatgaaaaatttagaggttaatgagtt 485  Q
    |||||| |||||||||||||| | | | |||| ||||| |||||| ||| |||| ||  ||||||||||||| |||| |||||||| ||||||||||    
T  9599582 tagatcagatggaggagagtcagatcataagaggtagaggaagacctagaaaaactacaagagaaactattaggaaatatttagagtttaatgagtt 9599486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 1e-30; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 187 - 495
Target Start/End: Original strand, 36545035 - 36545349
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||  |||||| |||||||| |||| |   ||||  ||||  ||||||||||||    
T  36545035 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgtgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 36545134  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    ||| |||||||||||  ||| || || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| |||||||   ||||    
T  36545135 agagagagagagtgggggtaacacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggt 36545234  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | ||||||  |||||||| ||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| |||    
T  36545235 aagaagagtagatcaaatggaggatagtcaagttaaaagacgtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaat 36545334  T
Q  481 gagttgaattcaaat 495  Q
    |||||| || |||||    
T  36545335 gagttggatccaaat 36545349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 187 - 508
Target Start/End: Original strand, 39946745 - 39947070
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||||||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| |||| |   ||||  ||||  ||||||||||||    
T  39946745 taagagtcaacacgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattatgaatgacaccatt 39946844  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    | |  || |||||||  |||||| || ||| | ||||||||| ||||||||||||  | || |||||||||||||| ||||||||||||||||   | ||    
T  39946845 ata--gaaagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagaaagaagacctgtagatgccgtcgt 39946942  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | ||||||  |||||||||| ||  |||| |||| ||||| || || |||| |||| ||  |||||||| ||||  ||| |||||||||| |||    
T  39946943 aagaagagtagatcaaatggaggagactcaagttagaagaggtagaggacgacctagaaaaactattagagaaaccattagaaaagatttagaggtcaat 39947042  T
Q  481 gagttgaattcaaatatgattcatgata 508  Q
    ||||||||| ||||| || || ||||||    
T  39947043 gagttgaatccaaatttggtttatgata 39947070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 187 - 495
Target Start/End: Complemental strand, 36565635 - 36565323
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||| | ||||||||| ||| | ||| | ||||| ||||| ||| |||||| |||||||| |||| |   ||||  ||||  ||||||||||||    
T  36565635 taagagtcaatatgagaatcaagtaagtgtagcagagatgaggatgatgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 36565536  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    |||  ||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||| ||| |||||||   ||||    
T  36565535 aga--gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaatacccgtagatgccgtggt 36565438  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    |||||   ||||||  |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| |||    
T  36565437 aagaagggtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaat 36565338  T
Q  481 gagttgaattcaaat 495  Q
    |||||| || |||||    
T  36565337 gagttggatccaaat 36565323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 269 - 436
Target Start/End: Original strand, 40813292 - 40813462
Alignment:
Q  269 attaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaag 367  Q
    ||||| ||||||||||||||| |||||||||||  |||||| || ||| | ||||||||| |||||||||| |  | || ||||| ||||||||||||||    
T  40813292 attaagaatgacaccattagagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaag 40813391  T
Q  368 acctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagac 436  Q
    | |||||||||   ||||||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||||    
T  40813392 atctgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagac 40813462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 321 - 498
Target Start/End: Complemental strand, 42854265 - 42854083
Alignment:
Q  321 aagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggtta 418  Q
    ||||||| ||||||||||||  | || ||||||||||||||||||||||| |||||||   | ||||||| | ||||||  ||||||||||||| |||||    
T  42854265 aagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaagaagagtagatcaaatggaggagagtcaggtta 42854166  T
Q  419 aaagatgtagaagaaga-ctaggaaaa--ttaagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatg 498  Q
    ||||| ||||| ||||| ||| |||||   |  ||||||| ||||  ||| |||||||||| ||||||||| || ||||||||    
T  42854165 aaagaggtagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagttggatccaaatatg 42854083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 269 - 508
Target Start/End: Original strand, 18125145 - 18125385
Alignment:
Q  269 attaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaag 367  Q
    |||| ||||||||||||||||    ||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || |||| |||||||||||||||    
T  18125145 attagaaatgacaccattaga----gagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgaacatgtagagagaag 18125240  T
Q  368 acctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagac-taggaaaatta--agagaaactattatg 462  Q
    ||| |||||||  |  ||||||| | ||||||  ||||||||||||||||||||| || ||||| | |||| ||| |||| ||  |||||||| ||||      
T  18125241 acccgtagatgccgtcgtaagaatagtagatcaaatggaggagagtcgggttaaa-gaggtagagggagacctagaaaaactattagagaaaccattaga 18125339  T
Q  463 aaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||| ||||| | || ||||||||| || ||||||||||| ||||||    
T  18125340 aaagatttaaaagtcaatgagttggatccaaatatgatttatgata 18125385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 187 - 495
Target Start/End: Original strand, 2796443 - 2796753
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatga---gataatattaaaaatgacacc 283  Q
    |||||||||||||||||||||| ||| | ||| ||||||| |||||||||  ||||| |||||||| |||||| ||   ||||  ||||  |||||||||    
T  2796443 taagagtcaacacgagaatcaagtaagtgtagcaaagatgaggatgttgcgctggatgagtggtaagactata-gacatgataggattaggaatgacacc 2796541  T
Q  284 attagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--tt 380  Q
    |||||  |||||||||||  |||||  || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||    |||||||||   |    
T  2796542 attag--agagagagtgggggtagcgcctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagaga----ctgtagatgccat 2796635  T
Q  381 ggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggtt 477  Q
     ||||||| | || |||  |||||||||||||  ||||||||| ||||| ||||| ||| ||||| ||  |||||||| ||||  ||  ||||||||||     
T  2796636 tgtaagaagagtaaatcaaatggaggagagtcatgttaaaagaggtagaggaagacctaagaaaactattagagaaaccattagaaaggatttagaggtc 2796735  T
Q  478 aatgagttgaattcaaat 495  Q
    ||| ||||||| ||||||    
T  2796736 aattagttgaactcaaat 2796753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 222 - 444
Target Start/End: Complemental strand, 36395309 - 36395084
Alignment:
Q  222 agatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataa 320  Q
    ||||| ||||||||| |||||| |||||||| |||| |   ||||  ||||  |||||||||||||||  ||||||||||  |||||| || ||| | ||    
T  36395309 agatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattaga--gagagagtgggggtagcacctatagtagaa 36395212  T
Q  321 aagttggaagaaaataggctccgg-tgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggtt 417  Q
    ||||||| ||||||||||||   | || ||||| |||||||||||||||||||||||||   ||||||||| | ||||||  |||||||| ||||  |||    
T  36395211 aagttggtagaaaataggctttagatggtttgggcatgtagagagaagacctgtagatgccgtggtaagaagagtagatcaaatggaggaaagtcaagtt 36395112  T
Q  418 aaaagatgtagaagaaga-ctaggaaaa 444  Q
    |||||| ||| | ||||| |||||||||    
T  36395111 aaaagaggtataggaagacctaggaaaa 36395084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 319 - 495
Target Start/End: Complemental strand, 12491401 - 12491220
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| |||||||   ||||||||| | ||||||  ||| |||||||||  ||    
T  12491401 aaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatgaaggagagtcaagt 12491302  T
Q  417 taaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||||||| ||||| ||||| ||| ||||| ||  |||||||| ||||  ||  |||||||||| ||||||||| || |||||    
T  12491301 taaaagaggtagatgaagacctatgaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaat 12491220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 348 - 495
Target Start/End: Complemental strand, 11523957 - 11523805
Alignment:
Q  348 tttggacatgtagagagaagacctgtagatgt--tggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaa 444  Q
    ||||| ||||||||||||||||| |||||||   ||||||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||| |||||||||    
T  11523957 tttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaa 11523858  T
Q  445 tta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
     ||  |||||||| ||||  ||  |||||||||| ||||||||| || |||||    
T  11523857 ctattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaat 11523805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 343 - 412
Target Start/End: Complemental strand, 43904904 - 43904833
Alignment:
Q  343 ggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtc 412  Q
    |||| |||||||||||||||||||||||| |||||||||  ||||||| |||||||| ||||||||| ||||    
T  43904904 ggtggtttggacatgtagagagaagacctatagatgttgtagtaagaagaatagatcagatggaggatagtc 43904833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 508
Target Start/End: Original strand, 2027632 - 2027743
Alignment:
Q  400 atggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaata 496  Q
    ||||||||||||| |||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| ||||||||  |||||||||    
T  2027632 atggaggagagtcaggttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaatgatttagaggtcaatgagttatattcaaata 2027731  T
Q  497 tgattcatgata 508  Q
    || || ||||||    
T  2027732 tggtttatgata 2027743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 9905132 - 9905082
Alignment:
Q  331 aaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg 381  Q
    ||||||||||  |||| |||||||||||||||||||||| |||||||||||    
T  9905132 aaaataggcttaggtggtttggacatgtagagagaagacttgtagatgttg 9905082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 508
Target Start/End: Original strand, 28169543 - 28169605
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||||||||||||||| |||| |||| ||| ||||||||||| ||||||||||| || ||||||    
T  28169543 taagagaaactattaggaaagattttgagattaatgagttggattcaaatatggtttatgata 28169605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 348 - 508
Target Start/End: Original strand, 29520698 - 29520862
Alignment:
Q  348 tttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagactaggaaaa- 444  Q
    ||||| |||||||||||||||| ||||||| |||  ||||| | | |||||| ||||||||| ||||   | | |||| ||||| |||| |||| ||||     
T  29520698 tttgggcatgtagagagaagacttgtagattttgtagtaaggagagtagatcagatggaggatagtcaaatcacaagaggtagaggaagcctagaaaaac 29520797  T
Q  445 -ttaagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
      ||||||||||| ||| |||  |||||||| ||||||||||| || |||||||| || ||||||    
T  29520798 tataagagaaactgttaggaacgatttagagattaatgagttggatccaaatatggtttatgata 29520862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 382 - 496
Target Start/End: Original strand, 37077835 - 37077952
Alignment:
Q  382 gtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaat--taagagaaactattatgaaaaatttagaggtta 478  Q
    ||||||| | ||||||  ||||||||||||||||| |||| | ||||| ||||| ||||||||||  |||||||||| ||||  ||  |||||||||| |    
T  37077835 gtaagaagagtagatcaaatggaggagagtcgggtcaaaataggtagatgaagacctaggaaaattataagagaaaccattagaaaggatttagaggtca 37077934  T
Q  479 atgagttgaattcaaata 496  Q
    |||||||| || ||||||    
T  37077935 atgagttggatccaaata 37077952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 494
Target Start/End: Original strand, 3802025 - 3802072
Alignment:
Q  447 aagagaaactattatgaaaaatttagaggttaatgagttgaattcaaa 494  Q
    |||||| |||||||||||| ||||| |||||||||||||| |||||||    
T  3802025 aagagagactattatgaaagatttaaaggttaatgagttggattcaaa 3802072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 508
Target Start/End: Complemental strand, 12966434 - 12966383
Alignment:
Q  457 attatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    |||| |||| |||||||| ||||||||||||||||||||||| || ||||||    
T  12966434 attaagaaagatttagagattaatgagttgaattcaaatatggtttatgata 12966383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 25288790 - 25288897
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||| ||||||||||||||||||| | ||| | | ||| ||||||||   ||||| |||||||| |||| ||||||||  ||||  || |||||||||    
T  25288790 taagagccaacacgagaatcaaataagtgtagcagatatgaggatgttgagctggattagtggtaagactagatgagataggattaggaaggacaccatt 25288889  T
Q  287 agaaagag 294  Q
    ||| ||||    
T  25288890 agagagag 25288897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 25300125 - 25300232
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||| ||||||||||||||||||| | ||| | | ||| ||||||||   ||||| |||||||| |||| ||||||||  ||||  || |||||||||    
T  25300125 taagagccaacacgagaatcaaataagtgtagcagatatgaggatgttgagctggattagtggtaagactagatgagataggattaggaaggacaccatt 25300224  T
Q  287 agaaagag 294  Q
    ||| ||||    
T  25300225 agagagag 25300232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 412
Target Start/End: Original strand, 45419169 - 45419349
Alignment:
Q  229 gatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttgg 327  Q
    |||||||| |||||| |||||||| |||| | | ||||| ||||  |||||||||||||||    |||| | |  |||||| || ||| | ||||| |||    
T  45419169 gatgttgcgttggattagtggtaagactagaagggataagattaggaatgacaccattaga----gagaattggggtagcacctatagtagaaaagatgg 45419264  T
Q  328 aagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttggtaagaaaaatagatcggatggaggagagtc 412  Q
     | ||||||| ||  |||| ||||| |||||||||| |||||||||||| | | ||| ||| | |||||| ||||||||||||||    
T  45419265 tataaaatagacttaggtggtttgggcatgtagagataagacctgtagaggctagtatgaagagtagatcagatggaggagagtc 45419349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 247 - 372
Target Start/End: Complemental strand, 10080239 - 10080117
Alignment:
Q  247 tggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatcttagcataaaagttggaagaaaataggctccggtg 346  Q
    |||||| |||| | ||||||| |||| |||||||| |||||||  |||||||| || ||||||||| || | ||||| |||  |||| ||||| | | ||    
T  10080239 tggtaagactagacgagataagattagaaatgacaacattaga--gagagagttgaggtagcatctaagtagaaaagatggtggaaactaggc-ctgatg 10080143  T
Q  347 atttggacatgtagagagaagacctg 372  Q
     ||||| |||||||||||||||||||    
T  10080142 gtttgggcatgtagagagaagacctg 10080117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 32043633 - 32043698
Alignment:
Q  343 ggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggagg 406  Q
    |||| ||||| |||||||||||||||||||| |||||||  ||||| | |||||||| ||||||||    
T  32043633 ggtggtttggccatgtagagagaagacctgtggatgttgtagtaaggagaatagatcagatggagg 32043698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 448 - 486
Target Start/End: Complemental strand, 45041444 - 45041406
Alignment:
Q  448 agagaaactattatgaaaaatttagaggttaatgagttg 486  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  45041444 agagaaactattaggaaagatttagaggttaatgagttg 45041406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 296
Target Start/End: Original strand, 37077653 - 37077762
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||| ||||||||||||||| ||| | | |   ||||| |||||||||  ||||| ||||||||||||| | ||||||  ||||  ||||||||||||    
T  37077653 taagagccaacacgagaatcaagtaagtgtggcggagatgaggatgttgcgctggatgagtggtaaaactagacgagataggattaggaatgacaccatt 37077752  T
Q  287 agaaagagag 296  Q
     | |||||||    
T  37077753 cggaagagag 37077762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 37256069 - 37256000
Alignment:
Q  229 gatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagag 298  Q
    |||||||| ||| || |||||| |||||| ||||||||  |||| |||||||||||||| | ||||||||    
T  37256069 gatgttgcgttgaatgagtggttaaactaaatgagatagaattagaaatgacaccattaaatagagagag 37256000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 9e-29; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 183 - 495
Target Start/End: Original strand, 28085260 - 28085576
Alignment:
Q  183 cggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacac 282  Q
    |||||||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| |||| |   ||||  ||||  ||||||||    
T  28085260 cggctaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattacgaatgacac 28085359  T
Q  283 cattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagat--gt 379  Q
    ||||||  |||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| ||| ||        
T  28085360 cattag--agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggccatgtagagagaagacccgtaaataaag 28085457  T
Q  380 tggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggt 476  Q
    ||||||||| | ||||||  |||||| ||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  ||||||||||    
T  28085458 tggtaagaagagtagatcaaatggagtagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggt 28085557  T
Q  477 taatgagttgaattcaaat 495  Q
     ||||||||| || |||||    
T  28085558 caatgagttggatccaaat 28085576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 222 - 495
Target Start/End: Original strand, 32755842 - 32756121
Alignment:
Q  222 agatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataa 320  Q
    ||||| ||||||||  |||||| |||||||| |||| |   ||||||||||  ||||||||||||||| |||||||||||  |||||| || ||| | ||    
T  32755842 agatgaggatgttgtgttggatgagtggtaagactagacatgataatattaggaatgacaccattagagagagagagtgggggtagcacctatagtagaa 32755941  T
Q  321 aagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgt--tggtaagaaaaatagatcggatggaggagagtcgggtta 418  Q
    ||||||| ||||||||||||  | || ||||| ||||||||| ||||||| | ||||||  |  |||||| | ||||||  |||||||||||||  ||||    
T  32755942 aagttggtagaaaataggcttagatggtttggtcatgtagagggaagacccgaagatgtcgtaataagaagagtagatcaaatggaggagagtcaagtta 32756041  T
Q  419 aaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||||| |||||  |||| ||||||||| ||  |||||||| ||||  ||| |||||||||| ||||||||| || |||||    
T  32756042 aaagaggtagagaaagacctaggaaaactattagagaaaccattagaaaagatttagaggtcaatgagttggatccaaat 32756121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 238 - 508
Target Start/End: Original strand, 30031195 - 30031469
Alignment:
Q  238 ttggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaata 336  Q
    |||||| |||||||| |||| | | ||||  |||| ||||| ||||||||||  ||| ||||||  |||||| || ||| | ||||||||| ||||||||    
T  30031195 ttggatgagtggtaagactagacgggataggattagaaatgtcaccattaga--gagggagtgggggtagcacctatagtagaaaagttggtagaaaata 30031292  T
Q  337 ggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaag 434  Q
    ||||  | ||| ||||||||||||||||||||||  ||||||   | ||||||| | ||||||  ||||||||||||| |||||||||| ||||| | ||    
T  30031293 ggcttagatgagttggacatgtagagagaagacccatagatgccgtcgtaagaagagtagatcaaatggaggagagtcaggttaaaagaggtagagggag 30031392  T
Q  435 a-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    | ||||||||| ||  |||||||| ||||  ||  |||||||||| ||||||||| ||| ||||||| || ||||||    
T  30031393 acctaggaaaactattagagaaacaattagaaaggatttagaggtcaatgagttggatttaaatatggtttatgata 30031469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 230 - 429
Target Start/End: Complemental strand, 5258501 - 5258299
Alignment:
Q  230 atgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttgga 328  Q
    ||||||| |||||| |||||||| |||| |  |||||  ||||  ||||||||| ||||| |||||||||||  |||||| || ||| | |||||||||     
T  5258501 atgttgcgttggatgagtggtaagactagacaagataggattatgaatgacaccgttagagagagagagtgggggtagcacctatagtagaaaagttggt 5258402  T
Q  329 agaaaataggctccggtgatttggacatgtagagagaagacctgtagat---gttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatg 425  Q
    ||||||||||||  | || ||||||||||||||||||||||| ||||||   ||| ||||||| | ||||||  |||||||||||||  ||||||||| |    
T  5258401 agaaaataggcttagatggtttggacatgtagagagaagacccgtagattccgtt-gtaagaagagtagatcaaatggaggagagtcatgttaaaagagg 5258303  T
Q  426 taga 429  Q
    ||||    
T  5258302 taga 5258299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 222 - 508
Target Start/End: Complemental strand, 9594071 - 9593777
Alignment:
Q  222 agatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtg----gaagtagcatc-ttagc 316  Q
    ||||| ||||||||| |||||| |||||||| |||| | | ||||  ||||  ||||||||||||||| |||||||| |    |  |||||| | ||||     
T  9594071 agatgaggatgttgcgttggatgagtggtaagactagacgggataggattaggaatgacaccattagagagagagagggagttggggtagcaccattagt 9593972  T
Q  317 ataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgg 414  Q
    | ||||| ||| ||||||||||||  |||| ||||| |||||||||||||||| |||||||| ||  ||||||| | |||||| ||||||||||||||      
T  9593971 agaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacatgtagatgctgtagtaagaagagtagatcagatggaggagagtcaa 9593872  T
Q  415 gttaaaagatgtagaagaaga-ctaggaaaat--taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
     |   |||| ||||| ||||| |||| |||||  ||||||||||||||| |||| | |||||| ||||||||||| || | |||||| || ||||||    
T  9593871 at--caagaggtagaggaagacctagaaaaattataagagaaactattaggaaagacttagagattaatgagttggatcccaatatggtttatgata 9593777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 291 - 501
Target Start/End: Complemental strand, 21352129 - 21351913
Alignment:
Q  291 agagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaaga 387  Q
    |||||||||||| |||||| || ||| | |||| |||| ||||||||||||  | ||||||||||||||||||||||||||||| ||||   | || |||    
T  21352129 agagagagtggaggtagcacctatagtagaaaaattggtagaaaataggcttagatgatttggacatgtagagagaagacctgtcgatgccattgttaga 21352030  T
Q  388 aaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagt 484  Q
    | |||||| |  |||||| |||||| |||||||||| ||||| ||||| ||| |||||  |  |||||||| ||||  ||| |||||||||| ||||||     
T  21352029 agaatagaacaaatggagaagagtcaggttaaaagaggtagaggaagacctaagaaaaccaatagagaaaccattagaaaagatttagaggtcaatgagc 21351930  T
Q  485 tgaattcaaatatgatt 501  Q
    || || |||||||||||    
T  21351929 tggatccaaatatgatt 21351913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 354 - 509
Target Start/End: Original strand, 26291833 - 26291991
Alignment:
Q  354 catgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagactaggaaaat-taaga 450  Q
    |||||||||||||||| | |||||||||  ||||||  | |||||| |||||||||||||  | | |||||| ||||| ||||||||  ||||  || ||    
T  26291833 catgtagagagaagacttatagatgttgcagtaagatgagtagatcagatggaggagagtgtgatcaaaagacgtagaggaagactaaaaaaaactatga 26291932  T
Q  451 gaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgatat 509  Q
    |||| |||||||||| |||||||| || |||||||||||  ||||||| || |||||||    
T  26291933 gaaattattatgaaagatttagagattcatgagttgaataaaaatatggtttatgatat 26291991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 221 - 423
Target Start/End: Original strand, 5631740 - 5631947
Alignment:
Q  221 aagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagag--tggaagtagcatct-tagca 317  Q
    |||||| ||||||||  |||||| |||||||| |||| |   ||||  ||||  ||||||||||||||| ||||||||  |||  ||| || || ||| |    
T  5631740 aagatgaggatgttgtgttggatgagtggtaagactagaccggatatgattaggaatgacaccattagagagagagagagtgggggtaacacctatagta 5631839  T
Q  318 taaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcggg 415  Q
     ||||||||| |||||||| |||  | || ||||||||||||||||||||||| |||||||  || ||||||| | ||||||  ||||||||||||| |     
T  5631840 gaaaagttggtagaaaatatgcttagatggtttggacatgtagagagaagacccgtagatgccttcgtaagaatagtagatcaaatggaggagagtcaga 5631939  T
Q  416 ttaaaaga 423  Q
    ||||||||    
T  5631940 ttaaaaga 5631947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 608176 - 608295
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||  ||||||||||||  | || |||||||||||||||||||||||||||||||  || ||||||| | | ||||  ||||||||||||| | |    
T  608176 aaaagttgatagaaaataggcttagatggtttggacatgtagagagaagacctgtagatgcctttgtaagaagagtggatcaaatggaggagagtcagat 608275  T
Q  417 taaaagatgtagaagaagac 436  Q
    ||||||| || || ||||||    
T  608276 taaaagaggttgatgaagac 608295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 275 - 498
Target Start/End: Complemental strand, 20427942 - 20427716
Alignment:
Q  275 aatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgt 373  Q
    |||||||||||||||  ||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || |||| || |||| |||||||||| ||    
T  20427942 aatgacaccattaga--gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgaacgtgtatagagaagacccgt 20427845  T
Q  374 agatgttg--gtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagac-taggaaaatta--agagaaactattatgaaaaat 468  Q
    |||||  |  ||||||| | || |||  || |||| ||||| ||||| |||| || || |||||| || ||||| ||  |||||||| |||| |||||||    
T  20427844 agatgccgttgtaagaagagtaaatcaaatagaggggagtcaggttacaagaggttgaggaagacctaagaaaactattagagaaaccatta-gaaaaat 20427746  T
Q  469 ttagaggttaatgagttgaattcaaatatg 498  Q
    |||||||||||||||||| || ||||||||    
T  20427745 ttagaggttaatgagttggatccaaatatg 20427716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 329 - 508
Target Start/End: Complemental strand, 28027079 - 28026896
Alignment:
Q  329 agaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggttaaaagatgt 426  Q
    ||||||||||||  |||| |||||||||||||||| || |||||||||||  |  ||| ||| | || ||| |||||||||||||| | ||| |||| ||    
T  28027079 agaaaataggctt-ggtggtttggacatgtagagataacacctgtagatgcggtagtacgaagagtatatcagatggaggagagtcagattagaagaggt 28026981  T
Q  427 agaagaagac-taggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||| |||||| ||  |||| ||  ||| |||| ||||||||| ||||| |||||||||| ||| ||||||||||| || ||||||    
T  28026980 agaggaagacctaaaaaaactataagaaaaaccattatgaaagatttacaggttaatgatttgtattcaaatatggtttatgata 28026896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 445 - 485
Target Start/End: Complemental strand, 6055903 - 6055863
Alignment:
Q  445 ttaagagaaactattatgaaaaatttagaggttaatgagtt 485  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  6055903 ttaagagaaactattatgaaagatttagaggttaatgagtt 6055863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 329 - 377
Target Start/End: Original strand, 24665839 - 24665887
Alignment:
Q  329 agaaaataggctccggtgatttggacatgtagagagaagacctgtagat 377  Q
    ||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  24665839 agaaaataggcttaggtggtttggacatgtagagagaagacctgtagat 24665887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 35043704 - 35043585
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    |||||||||  |||||||||||  | |  ||||||||||||||||||| ||| |||||||   | ||||||||| ||||||  ||||| ||||||| |||    
T  35043704 aaaagttggttgaaaataggcttagattgtttggacatgtagagagaatacccgtagatgccgttgtaagaaaagtagatcaaatggacgagagtcaggt 35043605  T
Q  417 taaaagatgtagaagaagac 436  Q
    ||||||| ||||| ||||||    
T  35043604 taaaagaagtagatgaagac 35043585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 9706640 - 9706816
Alignment:
Q  163 gtatggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatga 262  Q
    ||||||||| ||||||||   || ||||||||||||||||| | || ||| | |||   ||||| |||||||||| ||||| |||||||| |||| |       
T  9706640 gtatggtacgaagtgttaggtggttaagagtcaacacgagagtaaagtaagtgtagcggagatgaggatgttgcactggatgagtggtaagactagacat 9706739  T
Q  263 gataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggct 340  Q
    ||||  ||||  ||||||||||||||  |||||||||||| |||||| || | | | ||||||||| ||||||||||||    
T  9706740 gataggattaggaatgacaccattag--agagagagtggaggtagcacctattgtagaaaagttggtagaaaataggct 9706816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 319 - 438
Target Start/End: Original strand, 30679425 - 30679546
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgt--tggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||||||  | |||||||| ||||||||||| ||||| ||||||||  | ||||||| | ||||||  |||||| ||||||  ||    
T  30679425 aaaagttggtagaaaataggcttagatgatttgggcatgtagagaggagacccgtagatgtcgtcgtaagaatagtagatcaaatggagtagagtcaagt 30679524  T
Q  417 taaaagatgtagaagaagacta 438  Q
    || |||| ||| | ||||||||    
T  30679525 tataagaggtataggaagacta 30679546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 444
Target Start/End: Complemental strand, 10100122 - 10099994
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| |||||||| |||  | || ||||||||||||||||||||||  |||||||   | ||||||| | ||||||  ||| ||||||||| | |    
T  10100122 aaaagttggtagaaaataagcttagatggtttggacatgtagagagaagactcgtagatgccgttgtaagaagagtagatcaaatgaaggagagtcagtt 10100023  T
Q  417 taaaagatgtagaagaaga-ctaggaaaa 444  Q
    ||||||| ||||| ||||| |||||||||    
T  10100022 taaaagaggtagaggaagacctaggaaaa 10099994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 349 - 436
Target Start/End: Original strand, 7133795 - 7133884
Alignment:
Q  349 ttggacatgtagagagaagacctgtagatgt--tggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagac 436  Q
    |||| ||||||||||||||||| | |||||   ||||||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||||    
T  7133795 ttgggcatgtagagagaagacccgaagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagac 7133884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 349 - 436
Target Start/End: Original strand, 7136718 - 7136807
Alignment:
Q  349 ttggacatgtagagagaagacctgtagatgt--tggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagac 436  Q
    |||| ||||||||||||||||| | |||||   ||||||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||||    
T  7136718 ttgggcatgtagagagaagacccgaagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagac 7136807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 447 - 508
Target Start/End: Original strand, 24665963 - 24666024
Alignment:
Q  447 aagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    |||||||||||||| |||| |||||||||| ||||||||| ||  ||||||| || ||||||    
T  24665963 aagagaaactattaagaaatatttagaggtcaatgagttggatcgaaatatggtttatgata 24666024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 2e-26; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 163 - 495
Target Start/End: Original strand, 8180644 - 8180980
Alignment:
Q  163 gtatggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatga 262  Q
    |||||||||  ||||||  |||| |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||  |||||| |||||||| |||| |       
T  8180644 gtatggtacggagtgttggacggttaagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgtgttggatgagtggtaagactagacat 8180743  T
Q  263 gataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtaga 361  Q
    ||||  ||||  ||||||||||||||  |||||||||||  |||||| || ||| | ||||||||| |||||||| |||  | || ||||| ||||||||    
T  8180744 gataggattaggaatgacaccattag--agagagagtgggggtagcacctatagtagaaaagttggtagaaaataagcttagatggtttgggcatgtaga 8180841  T
Q  362 gagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagac-taggaaaatta--agagaaact 456  Q
    |||||||||||| ||||   ||||||||| | ||||||  |||||||||||||  ||||||||  ||||| |||||| |||||||| ||  ||| ||||     
T  8180842 gagaagacctgtggatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagcggtagaggaagacataggaaaactattagataaacc 8180941  T
Q  457 attatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||||  ||  |||||||||| ||||||||| || |||||    
T  8180942 attagaaaggatttagaggtcaatgagttggatccaaat 8180980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 182 - 376
Target Start/End: Complemental strand, 16097389 - 16097192
Alignment:
Q  182 acggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgaca 281  Q
    |||| |||||| ||||| ||||||||| ||| | |||   ||||| |||||||||| ||||| |||||||| |||| ||| ||||  |||| ||||||||    
T  16097389 acggttaagagccaacatgagaatcaagtaagtgtagcggagatgaggatgttgcactggatgagtggtaagactagatgggatatgattagaaatgaca 16097290  T
Q  282 ccattagaaagag--agagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtaga 376  Q
    || ||||| ||||  |||||||  |||||| || ||  | ||||||||| ||||||||||||  | ||||||||||||||||||||||||||||||||    
T  16097289 ccgttagagagagttagagtgggggtagcacctataatagaaaagttggtagaaaataggcttagatgatttggacatgtagagagaagacctgtaga 16097192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 163 - 495
Target Start/End: Original strand, 3865936 - 3866272
Alignment:
Q  163 gtatggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatga 262  Q
    |||||||||  ||||||  |||| |||||||||||| ||||||||| ||| | ||| | |||||  |||||||| |||||| |||||||| |||| |       
T  3865936 gtatggtacggagtgttggacggttaagagtcaacatgagaatcaagtaagtgtagcagagatgatgatgttgcgttggatgagtggtaagactagacat 3866035  T
Q  263 gataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtaga 361  Q
    ||||  ||||  |||||||||||| |  |||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||  ||||||||    
T  3866036 gataggattaggaatgacaccattgg--agagagagtgggggtagcacctatagtaaaaaagttggtagaaaataggcttagatggtttgtgcatgtaga 3866133  T
Q  362 gagaagacctgtagatgt--tggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaact 456  Q
    ||||||||| ||||||||  ||||||||| | ||||||  ||||||||||| |   |||||||| ||||| ||| | ||||||||| ||  ||||||||     
T  3866134 gagaagacccgtagatgtcgtggtaagaagagtagatcaaatggaggagagacaaattaaaagaggtagaggaaaacctaggaaaactattagagaaacc 3866233  T
Q  457 attatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||||  ||  |||||||||| ||||||||| || |||||    
T  3866234 attagaaaggatttagaggtcaatgagttggatccaaat 3866272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 275 - 508
Target Start/End: Original strand, 25834655 - 25834891
Alignment:
Q  275 aatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgt 373  Q
    ||||||||||||||| |||||||||||  |||||| || ||| | ||||||||| ||||||||||||  | || ||||||||||||||||||||||||||    
T  25834655 aatgacaccattagagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacctgt 25834754  T
Q  374 agatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaa-ttaagagaaactattatgaaaaatt 469  Q
     ||||   | ||||||| | ||||||  ||||||  ||||  |||||||||| ||||| ||||| ||||||||| || | |||||| ||||  ||  |||    
T  25834755 ggatgccgttgtaagaagagtagatcaaatggag--gagttaggttaaaagaggtagaggaagacctaggaaaactttaaagaaaccattagaaaggatt 25834852  T
Q  470 tagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||||||| ||||||||| || |||||||| || ||||||    
T  25834853 tagaggtcaatgagttggatccaaatatggtttatgata 25834891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 222 - 436
Target Start/End: Complemental strand, 41763400 - 41763186
Alignment:
Q  222 agatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataa 320  Q
    ||||| |||||||||  ||||| |||||||| |||| |  |||||  ||||  |||||||||||||||  ||||||||||  ||| || || ||| | ||    
T  41763400 agatgaggatgttgcgatggatgagtggtaagactagacaagataggattaggaatgacaccattaga--gagagagtggg-gtaacacctatagtagaa 41763304  T
Q  321 aagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggtta 418  Q
    ||||||| ||||||||||||  |||| |||||||||| ||||||||||||||||||||   | ||||||||| ||||||  ||||||||||||| |||||    
T  41763303 aagttggtagaaaataggcttaggtggtttggacatgcagagagaagacctgtagatgccgttgtaagaaaagtagatcaaatggaggagagtcaggtta 41763204  T
Q  419 aaagatgtagaagaagac 436  Q
    ||| | ||||| ||||||    
T  41763203 aaaaaggtagaggaagac 41763186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 275 - 495
Target Start/End: Complemental strand, 38452995 - 38452768
Alignment:
Q  275 aatgacaccattagaaagagagag--tggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacct 371  Q
    ||||||||||||||| ||||||||  |||  ||||||||| ||| | ||||||||| ||||||||||||  | || ||||| |||||||||||||||||     
T  38452995 aatgacaccattagagagagagagagtgggggtagcatctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagaccc 38452896  T
Q  372 gtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaa 466  Q
    |||||||   ||||||| || |||||||  |||||||| ||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||      
T  38452895 gtagatgccgtggtaag-aagatagatcaaatggaggaaagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaagg 38452797  T
Q  467 atttagaggttaatgagttgaattcaaat 495  Q
    |||||||||| ||||||||| || |||||    
T  38452796 atttagaggtcaatgagttggatccaaat 38452768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 222 - 508
Target Start/End: Original strand, 12734624 - 12734913
Alignment:
Q  222 agatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataa 320  Q
    ||||| ||||||||   ||||| |||||||| |||| | | ||||  |||| ||||||||||||||||    ||||||||  |||||| || ||| | ||    
T  12734624 agatgaggatgttgtgctggatgagtggtaagactagacgggataggattagaaatgacaccattaga----gagagtgggggtagcacctatagtagaa 12734719  T
Q  321 aagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggtta 418  Q
    || |||| ||||||||||||  | || |||||||||||| |||||||||| |||||||   ||||||||| | ||||||  ||||||||||||| |||||    
T  12734720 aaattggtagaaaataggcttagatggtttggacatgtaaagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaggtta 12734819  T
Q  419 aaaga-tgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    |||||  ||||| | ||| ||||||||| ||  |||||||| ||||  ||  |||||||||| ||||||||| || |||||||| || ||||||    
T  12734820 aaagagggtagagggagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgata 12734913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 222 - 498
Target Start/End: Original strand, 38429807 - 38430087
Alignment:
Q  222 agatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataa 320  Q
    ||||| ||||||||| |||||| |||||||| |||| |   ||||  ||||  |||||||||||||||  ||||||||||  | |||| || ||| | ||    
T  38429807 agatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattaga--gagagagtgggggcagcacctatagtagaa 38429904  T
Q  321 aagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggtta 418  Q
    ||||||| ||||||||||||  | || |||||||||||| |||||||||| ||| |||   | ||||||| | ||||||  ||||||||||||| |||||    
T  38429905 aagttggtagaaaataggcttagatggtttggacatgtaaagagaagacccgtatatgccgttgtaagaagagtagatcaaatggaggagagtcaggtta 38430004  T
Q  419 aaagatgtagaagaaga-ctaggaaaa--ttaagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatg 498  Q
    ||||| ||||| ||||| ||| |||||   |  ||||||| ||||  ||| |||||||||| ||||||||| || ||||||||    
T  38430005 aaagaagtagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagttggatccaaatatg 38430087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 187 - 486
Target Start/End: Complemental strand, 3244045 - 3243744
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||  ||||||||| |||||| ||| |||| |||| |   ||||  ||||  ||||||||||||    
T  3244045 taagagtcaacatgagaatcaagtaagtgtagcagagataaggatgttgcgttggatgagtagtaagactacacatgataggattatgaatgacaccatt 3243946  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgt--tggt 383  Q
    |||    ||||||||  |||||| || ||| | ||||||||   |||||||||||  | || |||||  |||||||||||||||| |||||||   ||||    
T  3243945 aga----gagagtgggggtagcacctatagtaaaaaagttgatggaaaataggcttagatggtttgggaatgtagagagaagacccgtagatgccgtggt 3243850  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| ||||||||  |||||||||||||  ||||||||| | ||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| |||    
T  3243849 aagaagaatagatcaaatggaggagagtcaagttaaaagaggcagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaat 3243750  T
Q  481 gagttg 486  Q
    ||||||    
T  3243749 gagttg 3243744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 187 - 500
Target Start/End: Original strand, 36183339 - 36183656
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||| ||||||||| |||||| |||||||| |||| |   ||||  ||||  |||||||| |||    
T  36183339 taagagtcaacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacacaatt 36183438  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggt 383  Q
    |||  |||||||| |  |||||| || ||| | ||||||||| ||||||||  ||  | || ||| | ||||||||||||||||| |||||||   ||||    
T  36183439 aga--gagagagtaggggtagcacctatagtagaaaagttggtagaaaataatcttagttggtttcggcatgtagagagaagacccgtagatgccgtggt 36183536  T
Q  384 aagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaat 480  Q
    ||||| | |||||   |||||||||||||  ||||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||  ||||||| || |||    
T  36183537 aagaagagtagataaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaagtcaat 36183636  T
Q  481 gagttgaattcaaatatgat 500  Q
    |||||| || ||||| ||||    
T  36183637 gagttggatccaaatttgat 36183656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 319 - 495
Target Start/End: Original strand, 2610607 - 2610788
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgt--tggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||||||  | || ||||| ||||||||||||||||  ||||||||  ||||||||| | ||||||  ||||| |||||||  ||    
T  2610607 aaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacacgtagatgtcgtggtaagaagagtagatcaaatggatgagagtcaagt 2610706  T
Q  417 taaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||||||| ||||| ||||| ||| ||||| ||  |||||||| ||||  ||  |||||||||| ||||||||| || |||||    
T  2610707 taaaagaggtagaggaagacctatgaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaat 2610788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 291 - 474
Target Start/End: Complemental strand, 18424669 - 18424480
Alignment:
Q  291 agagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaaga 387  Q
    |||||||||||  ||||||||| ||| | ||||||||| ||||||||||||  | || |||||||||||||||||| |||| |||||||  |  ||||||    
T  18424669 agagagagtgggtgtagcatctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagacgacccgtagatgccgacgtaaga 18424570  T
Q  388 aaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagac-taggaaaatta--agagaaactattatgaaaaatttagag 474  Q
    | | ||||||   |||| ||||||| |||||||||| ||||| |||||| |||||||| ||  |||||||| ||||| ||  ||||||||    
T  18424569 agattagatcaattggatgagagtcaggttaaaagaggtagaggaagacataggaaaactattagagaaaccattataaaggatttagag 18424480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 348 - 495
Target Start/End: Complemental strand, 7326394 - 7326242
Alignment:
Q  348 tttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagac-taggaaaa 444  Q
    ||||| |||||||||||||||||||||||||   ||||||||| | ||||||  ||| |||||||||  ||||||||| ||||| |||||| ||||||||    
T  7326394 tttgggcatgtagagagaagacctgtagatgccgtggtaagaagagtagatcaaatgaaggagagtcaagttaaaagaggtagaggaagacataggaaaa 7326295  T
Q  445 tta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
     ||  |||||||| ||||  ||  |||||||||| ||||||||| || |||||    
T  7326294 ctattagagaaaccattagaaatgatttagaggtcaatgagttggatccaaat 7326242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 319 - 436
Target Start/End: Complemental strand, 24583895 - 24583776
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| ||||||| ||  ||||||| | ||||||  |||||||||||||  ||    
T  24583895 aaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgctgtcgtaagaagagtagatcaaatggaggagagtcaagt 24583796  T
Q  417 taaaagatgtagaagaagac 436  Q
    |||||||  |||| ||||||    
T  24583795 taaaagagatagatgaagac 24583776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 446 - 497
Target Start/End: Original strand, 13149483 - 13149534
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatat 497  Q
    |||||||||||||||||||| |||||||||||||||||| |||| |||||||    
T  13149483 taagagaaactattatgaaagatttagaggttaatgagtagaatccaaatat 13149534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 377
Target Start/End: Complemental strand, 43752210 - 43752152
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagat 377  Q
    ||||| ||| ||||||||||||  ||||||||||||||||||||||||||||| |||||    
T  43752210 aaaaggtggtagaaaataggcttaggtgatttggacatgtagagagaagacctatagat 43752152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 321 - 495
Target Start/End: Complemental strand, 451909 - 451730
Alignment:
Q  321 aagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggtta 418  Q
    ||||||| ||||||||||||  | || ||||| |||||||||| |||||| |||||||   ||||||||| | ||||||  |||||||||||||  ||||    
T  451909 aagttggtagaaaataggcttagatggtttgggcatgtagagaaaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagtta 451810  T
Q  419 aaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||| | ||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| | ||||||| || |||||    
T  451809 aaaaaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcagtgagttggatccaaat 451730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 319 - 421
Target Start/End: Complemental strand, 41197491 - 41197387
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||||||  | || ||||||||||||||||||||| | |||||||   | ||||||| | ||||||  ||||||||||||| |||    
T  41197491 aaaagttggtagaaaataggcttagatggtttggacatgtagagagaagatccgtagatgccgttgtaagaagagtagatcaaatggaggagagtcaggt 41197392  T
Q  417 taaaa 421  Q
    |||||    
T  41197391 taaaa 41197387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 23997633 - 23997752
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    |||| |||| ||||||||| ||  | || ||| |||||||||| |||||||| |||||||| |  ||||||| | ||||||  ||||||||||||| |||    
T  23997633 aaaatttggtagaaaatagccttagatggttttgacatgtagaaagaagacccgtagatgtcgttgtaagaagagtagatcaaatggaggagagtcaggt 23997732  T
Q  417 taaaagatgtagaagaagac 436  Q
    ||||||| || |||||||||    
T  23997733 taaaagaggtggaagaagac 23997752  T

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Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 452 - 507
Target Start/End: Original strand, 11744680 - 11744735
Alignment:
Q  452 aaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgat 507  Q
    |||||||||||||||||||| |||||||||| |||||||||| ||| ||| |||||    
T  11744680 aaactattatgaaaaatttaaaggttaatgaattgaattcaattataatttatgat 11744735  T

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Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 508
Target Start/End: Original strand, 9496017 - 9496079
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    ||||||||||||||  |||| |||||||||||||||||||| || |||||||| || ||||||    
T  9496017 taagagaaactattcagaaagatttagaggttaatgagttggatccaaatatggtttatgata 9496079  T

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Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 295
Target Start/End: Original strand, 38434874 - 38434947
Alignment:
Q  222 agatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagaga 295  Q
    ||||| ||||||||||||||||  |||||||||||| | |||| || |||| |||||||| ||||||| |||||    
T  38434874 agatgaggatgttgcattggatgcgtggtaaaactagacgagagaagattagaaatgacaacattagagagaga 38434947  T

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Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 446 - 498
Target Start/End: Complemental strand, 12882176 - 12882124
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatg 498  Q
    |||||||||||| || |||| |||||||||||||||||||| || ||||||||    
T  12882176 taagagaaactactaggaaatatttagaggttaatgagttggatccaaatatg 12882124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 508
Target Start/End: Original strand, 28508780 - 28508891
Alignment:
Q  400 atggaggagagtcgggttaaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaata 496  Q
    |||||||||||||  ||||||||||||||| ||||| ||||||||| ||  |||||||| ||||  ||  |||||||||| ||||||||| || |||||     
T  28508780 atggaggagagtcaagttaaaagatgtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatt 28508879  T
Q  497 tgattcatgata 508  Q
    || || ||||||    
T  28508880 tggtttatgata 28508891  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 446 - 508
Target Start/End: Original strand, 41545556 - 41545618
Alignment:
Q  446 taagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    |||||||||| ||||| ||| || |||||||  |||||||||||||||||||| || ||||||    
T  41545556 taagagaaaccattataaaagatgtagaggtccatgagttgaattcaaatatggtttatgata 41545618  T

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Target: scaffold0570 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 319 - 495
Target Start/End: Complemental strand, 1211 - 1030
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||||||  | || ||||| ||||||||||||||||| |||||||   ||||||||| | ||||||  |||||| ||||||   |    
T  1211 aaaagttggtagaaaataggcttagatggtttggccatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggagaagagtcaaat 1112  T
Q  417 taaaagatgtagaagaaga-ctaggaaaatta--agagaaactattatgaaaaatttagaggttaatgagttgaattcaaat 495  Q
    ||||||| ||||| ||||| ||||||||| ||  |||||||| ||||  ||| |||||||||| ||||||||| || |||||    
T  1111 taaaagaggtagaggaagacctaggaaaactattagagaaaccattaaaaaagatttagaggtcaatgagttggatccaaat 1030  T

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Target: scaffold0024 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 222 - 508
Target Start/End: Original strand, 82644 - 82931
Alignment:
Q  222 agatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataa 320  Q
    ||||| |||||||||| ||||| ||| |||| |||| |   ||||  ||||| |||||||||||||||  ||||||||||  |||||| || ||| | ||    
T  82644 agatgaggatgttgcactggatgagtagtaagactagacatgataggattaagaatgacaccattaga--gagagagtgggggtagcacctatagtagaa 82741  T
Q  321 aagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatg--ttggtaagaaaaatagatcggatggaggagagtcgggtta 418  Q
    ||||||| ||||||| ||||  | |||||||||||| ||||||||||| |  ||||||   | |||||||   || |||  ||||||||||||  |||||    
T  82742 aagttggtagaaaatgggcttagatgatttggacatatagagagaagatccatagatgcagtcgtaagaagggtatatcaaatggaggagagt--ggtta 82839  T
Q  419 aaagatgtagaagaaga-ctaggaaaatta-agagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgata 508  Q
    | ||| ||||| ||||| ||||||||| || |||||||| ||||  ||  |||||||||| ||||||||| || ||||||||||| ||||||    
T  82840 agagaggtagaggaagacctaggaaaactatagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatgatttatgata 82931  T

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Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 4663 - 4552
Alignment:
Q  190 gagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccattaga 289  Q
    ||||||||||||||||||| ||||| ||  | | ||| ||||||||| |||||| | |||||| |||| |   ||||  |||| ||||||||||||||||    
T  4663 gagtcaacacgagaatcaagtaaatttaacagatatgaggatgttgcgttggatgaatggtaagactagacatgataggattataaatgacaccattaga 4564  T
Q  290 aagagagagtgg 301  Q
     |||||||||||    
T  4563 gagagagagtgg 4552  T

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Target: scaffold0045 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 429
Target Start/End: Complemental strand, 86872 - 86760
Alignment:
Q  319 aaaagttggaagaaaataggctccggtgatttggacatgtagagagaagacctgtagatgttg--gtaagaaaaatagatcggatggaggagagtcgggt 416  Q
    ||||||||| ||||||||| ||  | |  |||||||||||| |||||||||| |||||||  |  ||||||| | ||||||  ||||||||||||| |||    
T  86872 aaaagttggtagaaaatagtcttagatagtttggacatgtaaagagaagacccgtagatgccgtcgtaagaagagtagatcaaatggaggagagtcaggt 86773  T
Q  417 taaaagatgtaga 429  Q
    ||||||| |||||    
T  86772 taaaagaggtaga 86760  T

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Target: scaffold0113 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 368
Target Start/End: Complemental strand, 12014 - 11810
Alignment:
Q  165 atggtacaaagtgttaaacggctaagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgaga 264  Q
    |||||||||| ||||   ||| |||||||||||| ||||||||| ||  | ||| | ||||| |||||||||  ||||| || ||||| |||| |    |    
T  12014 atggtacaaaatgttgggcgggtaagagtcaacatgagaatcaagtatgtgtagcagagatgaggatgttgcgctggatgagcggtaagactagacataa 11915  T
Q  265 taatattaaaaatgacaccattagaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggctccggtgatttggacatgtagaga 363  Q
    ||  ||||  ||||||||||| ||| ||||| |||||  |||||| || ||| | ||||||||| ||||||||||||  | |||||||| |||||||| |    
T  11914 taggattaggaatgacaccatcagagagagatagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagaca 11815  T
Q  364 gaaga 368  Q
    |||||    
T  11814 gaaga 11810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 340
Target Start/End: Complemental strand, 25839 - 25687
Alignment:
Q  187 taagagtcaacacgagaatcaaataaatatagtaaagatggggatgttgcattggatcagtggtaaaactatatgagataatattaaaaatgacaccatt 286  Q
    |||||||||||| ||||||||| ||| | ||| | ||||  ||||||||  |||||| |||||||| |||| |   ||||  ||||  ||||||||||||    
T  25839 taagagtcaacatgagaatcaagtaagtgtagcagagattaggatgttgtgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 25740  T
Q  287 agaaagagagagtggaagtagcatct-tagcataaaagttggaagaaaataggct 340  Q
    ||  |||||||||||  |||||| || ||| | ||||||||| ||||||||||||    
T  25739 ag--agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggct 25687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 429 - 507
Target Start/End: Original strand, 14715 - 14795
Alignment:
Q  429 aagaagactaggaaaa--ttaagagaaactattatgaaaaatttagaggttaatgagttgaattcaaatatgattcatgat 507  Q
    ||||||||||||||||  ||||||||||| ||||  ||  ||||| |||| ||||||||| ||||||||||| || |||||    
T  14715 aagaagactaggaaaactttaagagaaaccattagaaaggatttaaaggtcaatgagttggattcaaatatggtttatgat 14795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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