View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18482_low_7 (Length: 568)

Name: NF18482_low_7
Description: NF18482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18482_low_7
NF18482_low_7
[»] chr6 (23 HSPs)
chr6 (150-289)||(1789781-1789920)
chr6 (155-284)||(18368705-18368834)
chr6 (149-289)||(18801693-18801833)
chr6 (150-289)||(4976518-4976657)
chr6 (170-289)||(31259514-31259633)
chr6 (168-281)||(190935-191048)
chr6 (155-284)||(31603883-31604012)
chr6 (156-289)||(13866264-13866388)
chr6 (155-289)||(15508348-15508482)
chr6 (156-289)||(24159238-24159370)
chr6 (156-220)||(32562446-32562510)
chr6 (155-291)||(5090048-5090184)
chr6 (150-208)||(21459016-21459074)
chr6 (150-215)||(12130475-12130540)
chr6 (172-217)||(21526288-21526333)
chr6 (155-208)||(24119286-24119339)
chr6 (158-215)||(25023495-25023552)
chr6 (155-237)||(5956421-5956503)
chr6 (174-220)||(34574630-34574676)
chr6 (171-208)||(1290397-1290434)
chr6 (155-208)||(20645657-20645710)
chr6 (155-208)||(22707290-22707343)
chr6 (168-208)||(21860246-21860286)
[»] chr8 (38 HSPs)
chr8 (155-289)||(12208805-12208939)
chr8 (155-289)||(12453233-12453367)
chr8 (149-289)||(18146335-18146475)
chr8 (156-289)||(45069785-45069918)
chr8 (155-284)||(43150251-43150380)
chr8 (150-284)||(4477590-4477724)
chr8 (155-289)||(43873957-43874091)
chr8 (152-284)||(39104149-39104281)
chr8 (155-289)||(40532057-40532190)
chr8 (168-289)||(35019499-35019620)
chr8 (177-289)||(34617683-34617795)
chr8 (170-289)||(41356304-41356423)
chr8 (156-289)||(38760777-38760909)
chr8 (150-289)||(45237759-45237898)
chr8 (156-289)||(31642715-31642848)
chr8 (156-289)||(38364437-38364570)
chr8 (153-220)||(43129587-43129654)
chr8 (155-215)||(2773623-2773683)
chr8 (173-220)||(29725758-29725805)
chr8 (172-289)||(15825603-15825719)
chr8 (156-289)||(19142888-19143021)
chr8 (153-215)||(34903418-34903480)
chr8 (155-208)||(25100262-25100315)
chr8 (156-289)||(35057267-35057400)
chr8 (156-289)||(42353658-42353789)
chr8 (155-208)||(43800816-43800869)
chr8 (149-289)||(21266830-21266970)
chr8 (156-220)||(35253065-35253129)
chr8 (155-215)||(40529500-40529560)
chr8 (168-289)||(45236930-45237051)
chr8 (156-215)||(3512471-3512530)
chr8 (246-289)||(41669736-41669779)
chr8 (155-208)||(25099412-25099465)
chr8 (247-288)||(25133301-25133342)
chr8 (155-208)||(39733725-39733778)
chr8 (155-215)||(5838255-5838315)
chr8 (156-208)||(22215111-22215163)
chr8 (156-208)||(35160317-35160369)
[»] chr7 (63 HSPs)
chr7 (150-289)||(30582665-30582804)
chr7 (156-289)||(37658081-37658214)
chr7 (155-289)||(35670320-35670454)
chr7 (155-289)||(9806555-9806689)
chr7 (155-289)||(40061162-40061296)
chr7 (168-289)||(31436213-31436334)
chr7 (168-284)||(31619517-31619633)
chr7 (155-289)||(31969432-31969566)
chr7 (156-289)||(33982281-33982414)
chr7 (168-289)||(39869987-39870108)
chr7 (155-285)||(8932470-8932600)
chr7 (175-284)||(1601951-1602060)
chr7 (155-291)||(42329519-42329655)
chr7 (155-284)||(43467981-43468110)
chr7 (154-289)||(596078-596213)
chr7 (158-289)||(31030730-31030861)
chr7 (150-289)||(44570926-44571065)
chr7 (159-289)||(33979619-33979749)
chr7 (156-289)||(43544862-43544995)
chr7 (155-289)||(41406187-41406321)
chr7 (155-289)||(44818720-44818854)
chr7 (155-289)||(37708056-37708191)
chr7 (155-208)||(21920843-21920896)
chr7 (155-289)||(34307114-34307248)
chr7 (175-289)||(39709810-39709924)
chr7 (172-289)||(585856-585973)
chr7 (386-429)||(18804501-18804544)
chr7 (386-429)||(34307331-34307374)
chr7 (155-289)||(25696032-25696166)
chr7 (172-220)||(1602161-1602209)
chr7 (152-289)||(44104542-44104679)
chr7 (155-215)||(46534407-46534467)
chr7 (149-208)||(43337626-43337685)
chr7 (156-238)||(42826000-42826082)
chr7 (155-208)||(27826708-27826761)
chr7 (155-208)||(28494323-28494376)
chr7 (156-225)||(30999374-30999443)
chr7 (155-220)||(35747024-35747089)
chr7 (155-208)||(42329070-42329123)
chr7 (155-208)||(43156567-43156620)
chr7 (168-208)||(14792164-14792204)
chr7 (513-553)||(18805274-18805314)
chr7 (156-220)||(36121431-36121495)
chr7 (156-289)||(42825855-42825988)
chr7 (155-211)||(46536121-46536177)
chr7 (175-238)||(1602070-1602133)
chr7 (156-215)||(6476926-6476985)
chr7 (160-215)||(30523994-30524049)
chr7 (246-289)||(47252934-47252977)
chr7 (157-208)||(48935236-48935287)
chr7 (246-284)||(18804362-18804400)
chr7 (156-237)||(3117318-3117399)
chr7 (252-289)||(8934868-8934905)
chr7 (155-220)||(42833759-42833824)
chr7 (156-208)||(4060352-4060404)
chr7 (385-421)||(8934734-8934770)
chr7 (168-220)||(25483604-25483656)
chr7 (148-208)||(28235277-28235337)
chr7 (156-208)||(28958169-28958221)
chr7 (156-208)||(42265320-42265372)
chr7 (155-215)||(46349924-46349984)
chr7 (152-208)||(46350883-46350939)
chr7 (156-208)||(47252217-47252269)
[»] chr4 (55 HSPs)
chr4 (156-289)||(30411218-30411351)
chr4 (155-289)||(19912672-19912806)
chr4 (155-284)||(45549652-45549781)
chr4 (150-289)||(202284-202423)
chr4 (158-289)||(55660548-55660679)
chr4 (155-284)||(55610662-55610791)
chr4 (168-289)||(1771806-1771927)
chr4 (155-289)||(30653498-30653631)
chr4 (156-289)||(48953030-48953163)
chr4 (156-289)||(26923505-26923638)
chr4 (149-238)||(20986267-20986356)
chr4 (155-289)||(50792382-50792516)
chr4 (168-289)||(28459624-28459745)
chr4 (198-289)||(318658-318749)
chr4 (158-289)||(31624364-31624495)
chr4 (155-289)||(2390236-2390370)
chr4 (155-289)||(10658849-10658983)
chr4 (155-289)||(10872994-10873128)
chr4 (147-289)||(48368935-48369077)
chr4 (156-289)||(51924026-51924160)
chr4 (153-220)||(19871008-19871075)
chr4 (158-289)||(49646027-49646156)
chr4 (158-289)||(50790826-50790960)
chr4 (153-289)||(7113477-7113617)
chr4 (155-289)||(19869959-19870093)
chr4 (155-220)||(43590533-43590598)
chr4 (155-214)||(14269864-14269923)
chr4 (155-220)||(27531829-27531894)
chr4 (159-216)||(49648859-49648916)
chr4 (153-217)||(7113627-7113691)
chr4 (156-208)||(24152676-24152728)
chr4 (247-289)||(20987058-20987100)
chr4 (150-208)||(43374589-43374647)
chr4 (155-289)||(54683596-54683730)
chr4 (155-208)||(6238187-6238240)
chr4 (155-208)||(19801910-19801963)
chr4 (148-289)||(28778548-28778689)
chr4 (156-217)||(45618061-45618122)
chr4 (155-208)||(49335238-49335291)
chr4 (155-208)||(53284006-53284059)
chr4 (156-208)||(39840242-39840294)
chr4 (155-215)||(55496077-55496137)
chr4 (156-215)||(30653331-30653390)
chr4 (157-208)||(37114481-37114532)
chr4 (246-289)||(43940087-43940130)
chr4 (247-289)||(31997922-31997964)
chr4 (171-217)||(34438079-34438125)
chr4 (155-289)||(53431629-53431763)
chr4 (155-208)||(6287836-6287889)
chr4 (155-208)||(33984087-33984140)
chr4 (155-208)||(45561363-45561415)
chr4 (155-208)||(55001791-55001844)
chr4 (386-423)||(55660777-55660814)
chr4 (155-211)||(36181414-36181470)
chr4 (172-208)||(51941119-51941155)
[»] chr3 (45 HSPs)
chr3 (150-289)||(40374474-40374613)
chr3 (156-289)||(32111526-32111659)
chr3 (156-289)||(40980106-40980239)
chr3 (149-289)||(36660102-36660242)
chr3 (155-289)||(46668340-46668474)
chr3 (148-289)||(6586257-6586398)
chr3 (155-289)||(12122847-12122981)
chr3 (179-289)||(32390080-32390190)
chr3 (168-289)||(36806934-36807055)
chr3 (156-288)||(39129374-39129506)
chr3 (155-289)||(5505931-5506065)
chr3 (155-289)||(34785844-34785978)
chr3 (172-289)||(48071992-48072109)
chr3 (157-289)||(46114989-46115121)
chr3 (212-289)||(38732206-38732283)
chr3 (156-220)||(42167367-42167431)
chr3 (156-273)||(50935713-50935830)
chr3 (172-288)||(7041746-7041862)
chr3 (155-220)||(41888808-41888873)
chr3 (155-289)||(48747403-48747537)
chr3 (172-220)||(22978095-22978143)
chr3 (172-220)||(43860742-43860790)
chr3 (153-217)||(50938275-50938339)
chr3 (150-208)||(9558907-9558965)
chr3 (155-289)||(19274729-19274863)
chr3 (199-289)||(49918278-49918369)
chr3 (155-220)||(42877239-42877304)
chr3 (147-215)||(32999697-32999765)
chr3 (156-220)||(41889456-41889520)
chr3 (153-220)||(39129297-39129364)
chr3 (168-215)||(42528096-42528143)
chr3 (246-289)||(44896032-44896075)
chr3 (150-208)||(8321478-8321536)
chr3 (155-208)||(41991731-41991784)
chr3 (150-215)||(51980726-51980791)
chr3 (156-208)||(34436022-34436074)
chr3 (155-238)||(39534958-39535041)
chr3 (150-208)||(52184874-52184932)
chr3 (252-289)||(2229135-2229172)
chr3 (155-208)||(4070815-4070868)
chr3 (155-208)||(12055562-12055615)
chr3 (252-289)||(22978174-22978211)
chr3 (156-220)||(2229205-2229269)
chr3 (247-287)||(48104931-48104971)
chr3 (156-208)||(52959292-52959344)
[»] chr1 (41 HSPs)
chr1 (155-289)||(5698125-5698259)
chr1 (155-289)||(14390421-14390555)
chr1 (168-289)||(39325483-39325604)
chr1 (150-289)||(30899388-30899527)
chr1 (156-289)||(31656369-31656502)
chr1 (150-289)||(3795930-3796069)
chr1 (155-289)||(9223839-9223973)
chr1 (148-284)||(42628189-42628325)
chr1 (155-289)||(5698507-5698640)
chr1 (155-289)||(35179819-35179953)
chr1 (155-289)||(31496609-31496743)
chr1 (154-289)||(38667185-38667324)
chr1 (172-289)||(44299910-44300027)
chr1 (158-288)||(4361027-4361157)
chr1 (155-289)||(27667674-27667808)
chr1 (156-220)||(4640128-4640192)
chr1 (168-220)||(44109967-44110019)
chr1 (196-284)||(18545568-18545656)
chr1 (156-215)||(38058749-38058808)
chr1 (156-287)||(23259085-23259215)
chr1 (153-220)||(11756907-11756974)
chr1 (150-208)||(39325605-39325663)
chr1 (155-208)||(2459693-2459746)
chr1 (155-208)||(27747606-27747659)
chr1 (155-208)||(30358073-30358126)
chr1 (155-220)||(43847464-43847529)
chr1 (155-208)||(44278012-44278065)
chr1 (155-215)||(41865286-41865346)
chr1 (156-289)||(42159612-42159745)
chr1 (156-208)||(50586226-50586278)
chr1 (155-218)||(40640678-40640741)
chr1 (170-205)||(50814223-50814258)
chr1 (246-284)||(18545244-18545282)
chr1 (247-289)||(20003990-20004032)
chr1 (155-208)||(11332841-11332894)
chr1 (155-208)||(11490862-11490915)
chr1 (155-208)||(28955602-28955655)
chr1 (155-208)||(38815596-38815649)
chr1 (252-288)||(4638488-4638524)
chr1 (156-208)||(11823584-11823636)
chr1 (156-208)||(25365760-25365812)
[»] chr5 (38 HSPs)
chr5 (155-284)||(3078512-3078641)
chr5 (156-289)||(13018994-13019127)
chr5 (168-289)||(20017272-20017393)
chr5 (156-284)||(8520567-8520695)
chr5 (155-261)||(1923946-1924052)
chr5 (168-289)||(20768834-20768955)
chr5 (172-289)||(15524378-15524497)
chr5 (198-289)||(7948404-7948495)
chr5 (172-220)||(3033335-3033383)
chr5 (147-238)||(11575613-11575704)
chr5 (155-273)||(4559462-4559580)
chr5 (155-220)||(8520496-8520561)
chr5 (147-215)||(7157538-7157606)
chr5 (155-289)||(17645305-17645439)
chr5 (156-220)||(3033393-3033457)
chr5 (148-208)||(42709303-42709363)
chr5 (150-289)||(24171359-24171498)
chr5 (156-215)||(36944280-36944339)
chr5 (155-208)||(5050149-5050202)
chr5 (155-208)||(6789661-6789714)
chr5 (155-208)||(15498644-15498697)
chr5 (156-289)||(25881507-25881640)
chr5 (155-208)||(29525368-29525421)
chr5 (155-208)||(34589973-34590026)
chr5 (155-208)||(37530792-37530845)
chr5 (155-208)||(41734316-41734369)
chr5 (152-208)||(11784240-11784296)
chr5 (156-215)||(2891014-2891073)
chr5 (149-208)||(10815056-10815115)
chr5 (156-215)||(36959466-36959525)
chr5 (247-289)||(5101977-5102019)
chr5 (158-208)||(16218355-16218405)
chr5 (155-208)||(12280780-12280833)
chr5 (149-194)||(27813062-27813107)
chr5 (156-208)||(5102750-5102802)
chr5 (155-215)||(13359521-13359581)
chr5 (156-208)||(36761062-36761114)
chr5 (249-289)||(41356314-41356354)
[»] chr2 (40 HSPs)
chr2 (157-289)||(18109681-18109813)
chr2 (155-289)||(40862170-40862303)
chr2 (150-289)||(26340000-26340139)
chr2 (155-289)||(1086042-1086176)
chr2 (153-289)||(33178958-33179094)
chr2 (157-289)||(39532063-39532195)
chr2 (155-289)||(44525953-44526087)
chr2 (156-288)||(38928457-38928589)
chr2 (155-289)||(7183248-7183382)
chr2 (156-289)||(6322106-6322239)
chr2 (155-289)||(8341121-8341255)
chr2 (156-289)||(10247351-10247482)
chr2 (156-289)||(14452300-14452433)
chr2 (170-284)||(28124977-28125091)
chr2 (159-289)||(32482211-32482341)
chr2 (168-284)||(11447252-11447368)
chr2 (155-238)||(36600936-36601019)
chr2 (169-289)||(37240962-37241082)
chr2 (148-208)||(45376901-45376961)
chr2 (246-289)||(7454477-7454520)
chr2 (155-208)||(6432169-6432222)
chr2 (155-208)||(10361392-10361445)
chr2 (147-208)||(11018079-11018140)
chr2 (172-220)||(6319553-6319601)
chr2 (158-238)||(15265358-15265438)
chr2 (156-220)||(33182604-33182668)
chr2 (152-208)||(39241208-39241264)
chr2 (150-208)||(30523603-30523661)
chr2 (155-217)||(36602770-36602832)
chr2 (148-289)||(3147439-3147580)
chr2 (155-208)||(12160961-12161014)
chr2 (155-208)||(24520265-24520318)
chr2 (172-216)||(38928603-38928647)
chr2 (254-289)||(27679093-27679128)
chr2 (155-208)||(1876080-1876133)
chr2 (155-208)||(34245245-34245298)
chr2 (155-208)||(42097959-42098012)
chr2 (156-208)||(16496663-16496715)
chr2 (156-208)||(42519714-42519766)
chr2 (156-208)||(43496162-43496214)
[»] scaffold0115 (2 HSPs)
scaffold0115 (155-289)||(4148-4282)
scaffold0115 (155-289)||(11888-12022)
[»] scaffold0009 (1 HSPs)
scaffold0009 (158-289)||(94370-94501)
[»] scaffold0039 (1 HSPs)
scaffold0039 (155-289)||(76243-76377)
[»] scaffold0007 (1 HSPs)
scaffold0007 (156-288)||(157582-157714)
[»] scaffold0060 (1 HSPs)
scaffold0060 (155-208)||(57896-57949)


Alignment Details
Target: chr6 (Bit Score: 83; Significance: 5e-39; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 1789781 - 1789920
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttt 249  Q
    |||| |||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| ||||||||||       ||||    
T  1789781 taaggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagacgtgtttggtaaaaagcttt 1789880  T
Q  250 tctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  1789881 tctcactagcttatagcgttttttaagaagctaatccaag 1789920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 18368834 - 18368705
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||       |||||||||    
T  18368834 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctca 18368735  T
Q  255 ctagcttatagcgttttttaagaagctaat 284  Q
    ||||||||||||||||||||||||||||||    
T  18368734 ctagcttatagcgttttttaagaagctaat 18368705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 149 - 289
Target Start/End: Original strand, 18801693 - 18801833
Alignment:
Q  149 ctaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnnctt 248  Q
    ||||| |||||||||||  |||||| |||||||||||||||||||| ||||| ||||||| ||||||||||| |||||| ||||||||||       |||    
T  18801693 ctaaggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactaacttataagcttgttttgataaaatgagacgtgtttggtaaaaagctt 18801792  T
Q  249 ttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  18801793 ttctcactagtttatagcgttttttaagaagctaatccaag 18801833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 4976518 - 4976657
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttt 249  Q
    |||| |||||||||||  |||||| || |||||||||||| |||| ||||||||||||| ||||||||||| |||||| ||||||||||       ||||    
T  4976518 taaggctgtgtttggtaacacaaaaaaactagcttatagcctgttggactagcttataagcttgttttgataaaatgagacgtgtttggtaaaaagcttt 4976617  T
Q  250 tctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  4976618 tctcactagcttatagcgttttttaagaagctaatccaag 4976657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 289
Target Start/End: Complemental strand, 31259633 - 31259514
Alignment:
Q  170 caaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcgtt 269  Q
    |||| ||||||| |||||||||||| | ||||||||||| ||||||||||| |||||| | |||||| |        |||||||||||||||||||||||    
T  31259633 caaaaaagctagattatagcttgttgggctagcttataagcttgttttgataaaatgagatgtgtttagtaaaaagtttttctcactagcttatagcgtt 31259534  T
Q  270 ttttaagaagctaattcaag 289  Q
    ||||||||||||||| ||||    
T  31259533 ttttaagaagctaatccaag 31259514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 190935 - 191048
Alignment:
Q  168 cacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcg 267  Q
    |||||| ||| ||| |||||||||||| |||||| |||||| ||||||||||| |||||| | ||||||||       ||||||||||||||||||||||    
T  190935 cacaaaaaagttagtttatagcttgttggactagtttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcactagcttatagcg 191034  T
Q  268 ttttttaagaagct 281  Q
    ||||| ||||||||    
T  191035 tttttgaagaagct 191048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 31604012 - 31603883
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    ||||||||| |  ||||||||||||||||||||| ||| | ||||||||||||| |||||||||||  |||   | ||||||||       ||||| |||    
T  31604012 ctgtgtttgataacacaaataagctagcttatagtttgctggactagcttataagcttgttttgatagaatacgatgtgtttggtaaaaaacttttttca 31603913  T
Q  255 ctagcttatagcgttttttaagaagctaat 284  Q
    ||||||||||||||||||||||||||||||    
T  31603912 ctagcttatagcgttttttaagaagctaat 31603883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 156 - 289
Target Start/End: Original strand, 13866264 - 13866388
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  || ||| |||||||||||||||||||| |||||||||||||||| ||||||||  ||||| | ||||||||          |||||||    
T  13866264 tgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataaactagttttgatagaatgagatgtgtttgga---------ttctcac 13866354  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||| |||||||||||||||||||||| ||||    
T  13866355 tagcttttagcgttttttaagaagctaatccaag 13866388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 15508348 - 15508482
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  ||| ||||||||||||||||||||||| ||||||||||||| ||| |||||||  ||| | | ||||||||        |||| |||    
T  15508348 ctgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttattttgatataataagatgtgtttggtaaaaagtttttttca 15508447  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||| |||| |||||||| |||||||| ||||||    
T  15508448 ctagcgtataacgttttttgagaagctatttcaag 15508482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 289
Target Start/End: Original strand, 24159238 - 24159370
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  ||| |||||| |||||||||| ||||| ||||||||||||| |||||||||||  ||| | | ||||||||       ||||| ||||    
T  24159238 tgtgtttggtaacacgaataaggtagcttatagtttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaaaagctttt-tcac 24159336  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||| ||| |||||||| ||||||    
T  24159337 tagcttatagcgttatttgagaagctatttcaag 24159370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 32562510 - 32562446
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    ||||||||||  ||| ||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  32562510 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagtttgttttgat 32562446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 5090184 - 5090048
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  ||| |||||||||||||||||||| || |||||||||||||  ||||||||||  ||| | | ||||  ||       |||||  ||    
T  5090184 ctgtgtttggtaacacgaataagctagcttatagcttcttggactagcttataagtttgttttgatataataagatgtgtagggtaaaaagctttttcca 5090085  T
Q  255 ctagcttatagcgttttttaagaagctaattcaagga 291  Q
    ||||||||||||||||||| ||||||||  |||||||    
T  5090084 ctagcttatagcgttttttgagaagctatatcaagga 5090048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 21459016 - 21459074
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||| |||||||||||  || | ||||||||||||||||||||||||| ||||||||||    
T  21459016 taaggctgtgtttggtaacatagataagctagcttatagcttgttagattagcttataa 21459074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 12130475 - 12130540
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    |||| |||||||||||  |||||| ||| |||||||||||||||| || ||||||||||| |||||    
T  12130475 taaggctgtgtttggtaacacaaaaaagttagcttatagcttgttggattagcttataaatttgtt 12130540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 21526288 - 21526333
Alignment:
Q  172 aataagctagcttatagcttgttagactagcttataaacttgtttt 217  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||||    
T  21526288 aataagcgagcttatagcttattagactagcttataagcttgtttt 21526333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 24119339 - 24119286
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  24119339 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 24119286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 25023552 - 25023495
Alignment:
Q  158 tgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    ||||||||  |||||| |||||||||||||||||||| || |||||||||| ||||||    
T  25023552 tgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagcttgtt 25023495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 5956421 - 5956503
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttg 237  Q
    |||||||||||  || | ||||||||||||||| ||| || |||||| |||||| |||||||||||  ||| | |||||||||    
T  5956421 ctgtgtttggtaacatagataagctagcttataacttcttggactagtttataagcttgttttgatagaataagacgtgtttg 5956503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 34574676 - 34574630
Alignment:
Q  174 taagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    |||| ||||||||| |||||| ||||||||||||| |||||||||||    
T  34574676 taagttagcttataacttgttggactagcttataagcttgttttgat 34574630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 1290397 - 1290434
Alignment:
Q  171 aaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  1290397 aaataagttagcttatagcttgttagaatagcttataa 1290434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 20645657 - 20645710
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||| ||||| || ||||||||||    
T  20645657 ctgtgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataa 20645710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 22707290 - 22707343
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||| ||||||    
T  22707290 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagtttataa 22707343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 21860246 - 21860286
Alignment:
Q  168 cacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||| |||||||||||||||||||| || ||||||||||    
T  21860246 cacaaaaaagctagcttatagcttgttggattagcttataa 21860286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 12208805 - 12208939
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| ||||||||||       |||||||||    
T  12208805 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagacgtgtttggtaaaaagcttttctca 12208904  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||||||||||||| ||||    
T  12208905 ctagcttatagcgttttttaagaagctaatccaag 12208939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 12453233 - 12453367
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| ||||||||||       |||||||||    
T  12453233 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagacgtgtttggtaaaaagcttttctca 12453332  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||||||||||||| ||||    
T  12453333 ctagcttatagcgttttttaagaagctaatccaag 12453367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 149 - 289
Target Start/End: Original strand, 18146335 - 18146475
Alignment:
Q  149 ctaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnnctt 248  Q
    ||||| |||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||       |||    
T  18146335 ctaaggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagctt 18146434  T
Q  249 ttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  18146435 ttctcactagcttatagcgttttttaagaagctaatccaag 18146475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 45069918 - 45069785
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||       ||||||||||    
T  45069918 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcac 45069819  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||||||||||| ||||    
T  45069818 tagcttatagcgttttttaagaagctaatccaag 45069785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 43150251 - 43150380
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||       ||||| |||    
T  43150251 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaaacttttttca 43150350  T
Q  255 ctagcttatagcgttttttaagaagctaat 284  Q
    ||||||||||||||||||||||||| ||||    
T  43150351 ctagcttatagcgttttttaagaagttaat 43150380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 150 - 284
Target Start/End: Complemental strand, 4477724 - 4477590
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttt 249  Q
    |||| |||||||||||  |||||| ||| |||||||||||||||| |||||| ||||||  |||||||||| |||||||| |||||||        ||||    
T  4477724 taaggctgtgtttggtaacacaaaaaagttagcttatagcttgttggactagattataagtttgttttgataaaatgaaatgtgtttgataaaaagcttt 4477625  T
Q  250 tctcactagcttatagcgttttttaagaagctaat 284  Q
    ||||||||||||||||| |||||||||||||||||    
T  4477624 tctcactagcttatagcattttttaagaagctaat 4477590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 43873957 - 43874091
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    ||||||||||| ||||||| ||||||| ||||||||||||  |||||||||||| ||||||||||| |||||| | ||||||||       ||||| |||    
T  43873957 ctgtgtttggtaccacaaaaaagctagtttatagcttgttgaactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaaacttttttca 43874056  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||| ||| |||||||||||||||||| ||||    
T  43874057 ctagcttttagtgttttttaagaagctaatccaag 43874091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 152 - 284
Target Start/End: Complemental strand, 39104281 - 39104149
Alignment:
Q  152 agactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttc 251  Q
    ||||||||||||||  |||||  |||||||||||||  ||||| ||||||||||||| |||||||| || |||||| | ||||||||       |||||     
T  39104281 agactgtgtttggtaacacaagaaagctagcttataatttgttggactagcttataagcttgtttttataaaatgagatgtgtttggtaaaaaacttttt 39104182  T
Q  252 tcactagcttatagcgttttttaagaagctaat 284  Q
    |||||||||||||||||||||||||||||||||    
T  39104181 tcactagcttatagcgttttttaagaagctaat 39104149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 40532057 - 40532190
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| |||||||||||||| || || ||||| ||||||| ||||||||||| |||||| | ||||| ||       |||||||||    
T  40532057 ctgtgtttggtaacacaaa-aagctagcttatagtttattggactaacttataagcttgttttgataaaatgagatgtgttcggtaaaaagcttttctca 40532155  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||||||||||||| ||||    
T  40532156 ctagcttatagcgttttttaagaagctaatccaag 40532190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 35019499 - 35019620
Alignment:
Q  168 cacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcg 267  Q
    |||||||||| |||||||||||||||| ||||||||||||| |||||||||||  ||| | | ||||||||       ||||| ||||||||||||||||    
T  35019499 cacaaataagatagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaaaaacttttttcactagcttatagcg 35019598  T
Q  268 ttttttaagaagctaattcaag 289  Q
    |||||| ||||| || ||||||    
T  35019599 tttttttagaagttatttcaag 35019620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 289
Target Start/End: Original strand, 34617683 - 34617795
Alignment:
Q  177 gctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcgttttttaag 276  Q
    |||||||||||||||||| | ||||||||||| |||||||||||  ||||| | ||||||||       ||||| |||||||||||||| ||||||||||    
T  34617683 gctagcttatagcttgttgggctagcttataagcttgttttgatagaatgagatgtgtttggtaaaaaacttttttcactagcttatagtgttttttaag 34617782  T
Q  277 aagctaattcaag 289  Q
    |||||||| ||||    
T  34617783 aagctaatccaag 34617795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 170 - 289
Target Start/End: Original strand, 41356304 - 41356423
Alignment:
Q  170 caaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcgtt 269  Q
    |||| ||| |||| ||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||       ||||||||| | ||||||||||||    
T  41356304 caaaaaagttagcatatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaacaagcttttctcattggcttatagcgtt 41356403  T
Q  270 ttttaagaagctaattcaag 289  Q
    ||||||||| ||||| ||||    
T  41356404 ttttaagaaactaatccaag 41356423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 38760909 - 38760777
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||   |||||||| |||| |||||||||||| ||||||||||||| |||||||||||  ||||| | ||||||||       |||||| |||    
T  38760909 tgtgtttggtaatacaaataaactagtttatagcttgttggactagcttataagcttgttttgatagaatgagatgtgtttggtaaaaagcttttc-cac 38760811  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||| ||||||||||| |||||| ||||||    
T  38760810 tagcttattgcgttttttaaaaagctatttcaag 38760777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 45237898 - 45237759
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttt 249  Q
    |||| |||||||||||  |||||| ||||||||||||||||||||  || ||||||||| ||||| |||||  ||||| | ||||||||       ||||    
T  45237898 taaggctgtgtttggtaacacaaaaaagctagcttatagcttgttgaacaagcttataagcttgtcttgatagaatgagatgtgtttggtaaaaagcttt 45237799  T
Q  250 tctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    | ||| |||||||||||||||||| | |||||| ||||||    
T  45237798 tttcattagcttatagcgttttttgaaaagctatttcaag 45237759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 31642848 - 31642715
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  ||| ||||||||||||||||||||||| |||||| |||||| |||||||||||  ||| | | ||||||||       |||||  |||    
T  31642848 tgtgtttggtaacacgaataagctagcttatagcttgttggactagattataagcttgttttgatacaataagatgtgtttggtaaaaagctttttccac 31642749  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    ||| |||||||||||||| ||||| || ||||||    
T  31642748 tagtttatagcgttttttgagaagttatttcaag 31642715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 38364570 - 38364437
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  ||| ||||| ||||||||||||||||| |||||| |||||| |||||||||||  ||| | | ||||||||       ||||| ||||    
T  38364570 tgtgtttggtaacacgaataaactagcttatagcttgttggactagtttataagcttgttttgatataataagatgtgtttggtaaaaaacttttttcac 38364471  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||| ||||||||||| ||||| || ||||||    
T  38364470 tagcttgtagcgttttttgagaagttatttcaag 38364437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 43129587 - 43129654
Alignment:
Q  153 gactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    |||||||||||||  ||| |||||||||| |||||||||||| ||||||||||||| |||||||||||    
T  43129587 gactgtgtttggtaacacgaataagctagtttatagcttgttggactagcttataaccttgttttgat 43129654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 2773683 - 2773623
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    |||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||    
T  2773683 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgtt 2773623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 29725758 - 29725805
Alignment:
Q  173 ataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||    
T  29725758 ataagctagcttatagcttgttggactagcttataagcttgttttgat 29725805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 289
Target Start/End: Complemental strand, 15825719 - 15825603
Alignment:
Q  172 aataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnn---cttttctcactagcttatagcgt 268  Q
    ||||||||||||||||||||||    ||||||||||| |||||||||||  ||| ||| ||||||||          ||||| |||||||||||||||||    
T  15825719 aataagctagcttatagcttgt----ctagcttataatcttgttttgatataataaaatgtgtttggtaaaaaaaaacttttttcactagcttatagcgt 15825624  T
Q  269 tttttaagaagctaattcaag 289  Q
    ||||| |||||||| ||||||    
T  15825623 ttttttagaagctatttcaag 15825603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 19143021 - 19142888
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  ||| ||||| ||||||||||||||||| ||||  ||||||| ||||||||| |  ||| | | ||||||||        |||| ||||    
T  19143021 tgtgtttggtaacacgaataaactagcttatagcttgttggactgacttataagcttgttttgttataataagatgtgtttggtgaaaagtttttttcac 19142922  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||| ||||||| |||| ||||||||||    
T  19142921 tagcttatagtgttttttgagaaactaattcaag 19142888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 34903480 - 34903418
Alignment:
Q  153 gactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    |||||||||||||  ||||||||| |||||||| | |||||| ||||||||||||| ||||||    
T  34903480 gactgtgtttggtaacacaaataaactagcttacaccttgttggactagcttataagcttgtt 34903418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 25100315 - 25100262
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| ||||||||||||||||||||||  ||||||||||    
T  25100315 ctgtgtttggtaacacaaaaaagctagcttatagcttgttagcttagcttataa 25100262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 35057400 - 35057267
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatg-aaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    ||||||||||  || ||||||| ||||||||||||||||||| |||||||||| || | || |||| ||| |  ||||||||||       |||||||||    
T  35057400 tgtgtttggtaacataaataagatagcttatagcttgttagattagcttataagctcg-ttggatgcaaacgtgacgtgtttggtaacaagcttttctca 35057302  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
      ||||||||||| ||||| | |||||||||||||    
T  35057301 tgagcttatagcgatttttgaaaagctaattcaag 35057267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 42353789 - 42353658
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||   ||||| ||| ||| |||||| ||||| || ||||||||||  ||||||||||  |||||   ||||||||       ||||||| ||    
T  42353789 tgtgtttggtaatacaaaaaagttagtttatagtttgttggattagcttataagtttgttttgatagaatgat--gtgtttggtaaaaagcttttcttac 42353692  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    | |||||||||||||||||||||| |||||||||    
T  42353691 tggcttatagcgttttttaagaagttaattcaag 42353658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 43800869 - 43800816
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  43800869 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 43800816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 289
Target Start/End: Complemental strand, 21266970 - 21266830
Alignment:
Q  149 ctaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaat-gaaacgtgtttggnnnnnnnct 247  Q
    ||||| || ||||||||  || ||||||||||||||| ||||||||||| ||||||| || ||  ||  |||||||  |  ||||||||||       ||    
T  21266970 ctaaggctatgtttggtaacataaataagctagcttaaagcttgttagattagcttagaagctcattg-gatgaaaacgtgacgtgtttggtaacaagct 21266872  T
Q  248 tttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||| |||||||| |||||||||| |||||||||||||    
T  21266871 tttctcacgagcttataacgttttttaaaaagctaattcaag 21266830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 35253129 - 35253065
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    ||||||||||  |||||| |||||||||||||| ||| | ||| ||||||||| |||||||||||    
T  35253129 tgtgtttggtaacacaaacaagctagcttatagtttgctggacaagcttataagcttgttttgat 35253065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 40529500 - 40529560
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    |||||||||||  |||||| |||||||||||||||||||| |  |||||||||| ||||||    
T  40529500 ctgtgtttggtaacacaaaaaagctagcttatagcttgtttgtttagcttataagcttgtt 40529560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 289
Target Start/End: Complemental strand, 45237051 - 45236930
Alignment:
Q  168 cacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcg 267  Q
    |||||| ||||||||||||| ||| ||  |||||||||||   ||||||||||  ||||| || |||||||       ||||||||| ||||||||| ||    
T  45237051 cacaaaaaagctagcttataactttttgtactagcttataggtttgttttgatagaatgagacatgtttggtaaaaagcttttctcattagcttataacg 45236952  T
Q  268 ttttttaagaagctaattcaag 289  Q
    |||||| | |||||| ||||||    
T  45236951 ttttttgaaaagctatttcaag 45236930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 3512471 - 3512530
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    ||||||||||  |||||| ||||||||||||||||| || || |||||||||| ||||||    
T  3512471 tgtgtttggtaacacaaaaaagctagcttatagcttcttggattagcttataagcttgtt 3512530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 41669736 - 41669779
Alignment:
Q  246 cttttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  41669736 cttttctcactagcttataacgttttttgagaagctatttcaag 41669779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 25099412 - 25099465
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| ||||||||||||| |||||| || ||||||||||    
T  25099412 ctgtgtttggtaacacaaaaaagctagcttataacttgttggattagcttataa 25099465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 25133301 - 25133342
Alignment:
Q  247 ttttctcactagcttatagcgttttttaagaagctaattcaa 288  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  25133301 ttttctcactagcttatagtattttttaaaaagctaattcaa 25133342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 39733725 - 39733778
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| ||||||||||||| |||||| || ||||||||||    
T  39733725 ctgtgtttggtaacacaaaaaagctagcttataccttgttggattagcttataa 39733778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 5838255 - 5838315
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    |||||||||||   ||||| |||||| ||||||||||||| || |||||||||| ||||||    
T  5838255 ctgtgtttggtaatacaaaaaagctaacttatagcttgttggattagcttataagcttgtt 5838315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 22215111 - 22215163
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||  |||||| ||| |||||||||||||||| || ||||||||||    
T  22215111 tgtgtttggtaacacaaaaaagttagcttatagcttgttggattagcttataa 22215163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 35160369 - 35160317
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||  |||||| ||||||||||||||||| || || ||||||||||    
T  35160369 tgtgtttggtaacacaaaaaagctagcttatagcttattggattagcttataa 35160317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 1e-36; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 30582665 - 30582804
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttt 249  Q
    |||| |||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||       ||||    
T  30582665 taaggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgatatgtgtttggtaaaaagcttt 30582764  T
Q  250 tctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  30582765 tctcactagcttatagcgttttttaagaagctaatccaag 30582804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 37658214 - 37658081
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||       ||||||||||    
T  37658214 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcac 37658115  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||||||||||| ||||    
T  37658114 tagcttatagcgttttttaagaagctaatccaag 37658081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 35670454 - 35670320
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||       |||||||||    
T  35670454 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaaacttttctca 35670355  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||| ||||||||||||||||| ||||    
T  35670354 ctagcttatagcattttttaagaagctaatccaag 35670320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 9806689 - 9806555
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  || ||| ||| ||| |||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||       |||||||||    
T  9806689 ctgtgtttggtaacataaaaaagttagtttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctca 9806590  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||||||||||||||||||    
T  9806589 ctagcttatagcgttttttaagaagctaattcaag 9806555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 40061162 - 40061296
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| |||||||||||||||||||| ||||||||||||| |||||||| || |||||| | ||||||||       |||||||||    
T  40061162 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttaataaaatgagatgtgtttggtaaaaagcttttctca 40061261  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||| |||||||||||||||||| ||||    
T  40061262 ctagcttatagtgttttttaagaagctaatccaag 40061296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 168 - 289
Target Start/End: Complemental strand, 31436334 - 31436213
Alignment:
Q  168 cacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcg 267  Q
    |||||| |||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| ||||||||        |||||||||||||||||||||    
T  31436334 cacaaaaaagctagcttatagcttgttggactaacttataaacttgttttgataaaatgaaatgtgtttggtaaaaagtttttctcactagcttatagcg 31436235  T
Q  268 ttttttaagaagctaattcaag 289  Q
    |||||||| |||||||| ||||    
T  31436234 ttttttaataagctaatccaag 31436213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 168 - 284
Target Start/End: Original strand, 31619517 - 31619633
Alignment:
Q  168 cacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcg 267  Q
    |||||| ||||||| |||||||||||| ||||||||||||| ||||||||||| |||||| ||||||||||       ||||| ||||||||||||||||    
T  31619517 cacaaaaaagctagtttatagcttgttggactagcttataagcttgttttgataaaatgagacgtgtttggtaaaaagcttttatcactagcttatagcg 31619616  T
Q  268 ttttttaagaagctaat 284  Q
    |||||||||||||||||    
T  31619617 ttttttaagaagctaat 31619633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 31969566 - 31969432
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| ||| |||||||||| ||||| ||||| ||||||| ||||||||||| |||||||| ||||||||       |||||||||    
T  31969566 ctgtgtttggtaacacaaaaaagttagcttatagattgttggactaacttataagcttgttttgataaaatgaaatgtgtttggtaaaaagcttttctca 31969467  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||| ||||||||||||||||| ||||    
T  31969466 ctagcttatagcattttttaagaagctaatccaag 31969432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 33982414 - 33982281
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||  ||| | | ||||||||       ||||| ||||    
T  33982414 tgtgtttggtgacacgaataagctagcttatagcttgttagactagcttataagcttgttttgatataataagatgtgtttggtaaaaagcttttttcac 33982315  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||| | |||||| ||||||    
T  33982314 tagcttatagcgttttttgataagctatttcaag 33982281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 168 - 289
Target Start/End: Complemental strand, 39870108 - 39869987
Alignment:
Q  168 cacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcg 267  Q
    |||||| |||||||||||||| ||||| || |||||||||| ||||||||||| |||||| | ||||||||       ||||||||||||||||||| ||    
T  39870108 cacaaaaaagctagcttatagtttgttggattagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcactagcttataacg 39870009  T
Q  268 ttttttaagaagctaattcaag 289  Q
    ||||||||||||||||| ||||    
T  39870008 ttttttaagaagctaatccaag 39869987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 155 - 285
Target Start/End: Complemental strand, 8932600 - 8932470
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||||||  ||| ||||| |||||| ||||||||||||| |||||||||||  ||||| | ||||||||       |||||||||    
T  8932600 ctgtgtttggtaacacaaataaattagtttataacttgttggactagcttataagcttgttttgatagaatgagatgtgtttggtaaaaagcttttctca 8932501  T
Q  255 ctagcttatagcgttttttaagaagctaatt 285  Q
    ||| |||||||||||||||||||||||||||    
T  8932500 ctaacttatagcgttttttaagaagctaatt 8932470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 175 - 284
Target Start/End: Complemental strand, 1602060 - 1601951
Alignment:
Q  175 aagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcgtttttta 274  Q
    |||||||||||||||||||| ||||||||||||| || ||||||||  ||||| | ||||||||       ||||||||||||||||||||| |||||||    
T  1602060 aagctagcttatagcttgttggactagcttataagctagttttgatagaatgagatgtgtttggtaaaaagcttttctcactagcttatagcttttttta 1601961  T
Q  275 agaagctaat 284  Q
    ||||||||||    
T  1601960 agaagctaat 1601951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 42329655 - 42329519
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| || | ||||||||||||||| |||||| |||||| |||| |||||| |||||| | | ||||||        ||||||||    
T  42329655 ctgtgtttggtaacacaaaaaaaccagcttatagcttgttggactagtttataagcttgctttgataaaatgagatgcgtttggtaaaaagtttttctca 42329556  T
Q  255 ctagcttatagcgttttttaagaagctaattcaagga 291  Q
    ||| |||||||||||||||||||||||||||||||||    
T  42329555 ctaacttatagcgttttttaagaagctaattcaagga 42329519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 43468110 - 43467981
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |  ||| |||||||||||||| ||||| |||| ||||||||  |||||||||| |||||| | ||||||||       |||||||||    
T  43468110 ctgtgtttggtaaccgaaaaaagctagcttatagtttgttggactggcttataagtttgttttgataaaatgagatgtgtttggtaaaaagcttttctca 43468011  T
Q  255 ctagcttatagcgttttttaagaagctaat 284  Q
     |||||||||||||||||||||||||||||    
T  43468010 ttagcttatagcgttttttaagaagctaat 43467981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 596213 - 596078
Alignment:
Q  154 actgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctc 253  Q
    ||||||||||||  ||| ||||||||||  |||| |||||| ||||||||||||| |||||||||||  |||  || ||||||||       ||||| ||    
T  596213 actgtgtttggtaacacgaataagctaggatataacttgttggactagcttataagcttgttttgatataatataatgtgtttggtaaaaaacttttttc 596114  T
Q  254 actagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||| |||||||| ||||||    
T  596113 actagcttatagcgttttttgagaagctatttcaag 596078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 158 - 289
Target Start/End: Complemental strand, 31030861 - 31030730
Alignment:
Q  158 tgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcacta 257  Q
    ||||||||  || ||| ||||||  |||||| ||||| ||||||||||||| ||||||||||| |||| | | ||||||||        |||||||||||    
T  31030861 tgtttggtaacataaaaaagctaatttatagtttgttggactagcttataagcttgttttgataaaataagatgtgtttggtaaaaagtttttctcacta 31030762  T
Q  258 gcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||||||||| ||||    
T  31030761 gcttatagcgttttttaagaagctaatccaag 31030730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 44570926 - 44571065
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttt 249  Q
    |||| |||||||||||  |||||| ||| ||||||||||||| || ||||||||||||| || |||||  |  ||||||||||||||||       ||||    
T  44570926 taaggctgtgtttggtaacacaaaaaagttagcttatagcttattggactagcttataagctagtttttgtagaatgaaacgtgtttggtaaaaaacttt 44571025  T
Q  250 tctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||| | |||||||||||||||||| ||||| |||||||||    
T  44571026 tcttattagcttatagcgttttttgagaagttaattcaag 44571065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 289
Target Start/End: Original strand, 33979619 - 33979749
Alignment:
Q  159 gtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactag 258  Q
    |||||||  ||| ||||||||||||||||||||||| ||||| ||||||| | |||||||||  ||| | | ||||||||       ||||| |||||||    
T  33979619 gtttggtaacacgaataagctagcttatagcttgttggactaccttataagcatgttttgatataataagatgtgtttggtaaaaaacttttttcactag 33979718  T
Q  259 cttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||| |||||||| ||||||    
T  33979719 cttatagcgttttttgagaagctatttcaag 33979749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 43544995 - 43544862
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  ||| ||||||||| ||||||||||||| ||||||||||||| |||||||||||  ||| | | ||||||||       ||||| ||||    
T  43544995 tgtgtttggtaacacgaataagctaacttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaaaagcttttttcac 43544896  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||| ||||| | |||||| ||||||    
T  43544895 tagcttatagcgctttttgataagctatttcaag 43544862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 41406187 - 41406321
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  ||| |||||||||||||||||||| || ||||| ||||||| |||||||||||  ||| | | ||||||||       ||||| |||    
T  41406187 ctgtgtttggtaacacgaataagctagcttatagcttattggactatcttataagcttgttttgatttaataagatgtgtttggtgaaaagcttttttca 41406286  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||  ||||||| |||||||| ||||||    
T  41406287 ctagcttataaagttttttgagaagctatttcaag 41406321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 44818720 - 44818854
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  || ||| |||||||||||||  ||||| ||||||||||||||||||||||  |  ||||| || |||||||       ||||| |||    
T  44818720 ctgtgtttggtaacataaaaaagctagcttataatttgttggactagcttataaacttgtttttgtagaatgagacatgtttggtaaaaagcttttttca 44818819  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
     |||||||||||||||||| | |||||||||||||    
T  44818820 ttagcttatagcgttttttgataagctaattcaag 44818854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 37708191 - 37708056
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttgg-nnnnnnncttttctc 253  Q
    |||||||| ||  ||| ||||||||| ||||||||||||| ||||||||||||| |||||||||||  ||| | | |||| |||        ||||| ||    
T  37708191 ctgtgtttcgtaacacgaataagctaccttatagcttgttggactagcttataaccttgttttgatataataagatgtgtctggtaaaaaagcttttttc 37708092  T
Q  254 actagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||| |||||||| ||||||    
T  37708091 actagcttatagcgttttttgagaagctatttcaag 37708056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 21920896 - 21920843
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  21920896 ctgtgtttggtaacacaaataagctagcttatagcttgttggactagcttataa 21920843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 34307114 - 34307248
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  || ||||||| ||| |||||| |||||  ||||  ||||||| |||||||||| |||| | | |||||||        |||||| ||    
T  34307114 ctgtgtttggtaacataaataagttagtttatagtttgttgtactaatttataaatttgttttgataaaataagatgtgtttgaaaaaaaacttttcaca 34307213  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||||||||||||| ||||    
T  34307214 ctagcttatagcgttttttaagaagctaatccaag 34307248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 289
Target Start/End: Complemental strand, 39709924 - 39709810
Alignment:
Q  175 aagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcgtttttta 274  Q
    |||||||| ||||| ||||| ||||||||||| | |||||||||||  ||||| |  |||||||       ||||||| ||||| |||||| ||||||||    
T  39709924 aagctagcgtataggttgttggactagcttatgagcttgttttgatagaatgagatatgtttggtgaaaaacttttcttactagtttatagtgtttttta 39709825  T
Q  275 agaagctaattcaag 289  Q
    |||||||||||||||    
T  39709824 agaagctaattcaag 39709810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 172 - 289
Target Start/End: Complemental strand, 585973 - 585856
Alignment:
Q  172 aataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcgtttt 271  Q
    ||||||||| ||||||||||||| ||||||||||||| ||| ||||||| |||| | | ||||||||       ||||| ||| || ||||||| |||||    
T  585973 aataagctaacttatagcttgttggactagcttataagcttattttgataaaataagatgtgtttggtaagaaacttttttcaataacttatagtgtttt 585874  T
Q  272 ttaagaagctaattcaag 289  Q
    || |||||||| ||||||    
T  585873 ttgagaagctatttcaag 585856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 429
Target Start/End: Original strand, 18804501 - 18804544
Alignment:
Q  386 ccactatcttattgaactaaccacgtttaccatgttgtcaaata 429  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  18804501 ccactatcttattaaactaaccacgtttaccatgttgtcaaata 18804544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 429
Target Start/End: Original strand, 34307331 - 34307374
Alignment:
Q  386 ccactatcttattgaactaaccacgtttaccatgttgtcaaata 429  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  34307331 ccactatcttattaaactaaccacgtttaccatgttgtcaaata 34307374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 25696032 - 25696166
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatg-aaatgaaacgtgtttggnnnnnnncttttctc 253  Q
    |||||||||||  || |||||| |||||||||||||||||||| |||||||||| || | || |||| ||| |  ||||||||||       ||||||||    
T  25696032 ctgtgtttggtaacataaataaactagcttatagcttgttagattagcttataagctcg-ttggatgaaaacgtgacgtgtttggtaacaagcttttctc 25696130  T
Q  254 actagcttatagcgttttttaagaagctaattcaag 289  Q
    |  ||||||||||||||||| ||||| |||||||||    
T  25696131 atgagcttatagcgttttttgagaagttaattcaag 25696166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 1602209 - 1602161
Alignment:
Q  172 aataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||||||    
T  1602209 aataagatagcttatagcttgttggactagcttataagcttgttttgat 1602161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 289
Target Start/End: Complemental strand, 44104679 - 44104542
Alignment:
Q  152 agactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttc 251  Q
    ||||||||||||||  || ||| |||||||||||||| ||||| ||| | ||||||| ||||| |||||  ||||| | ||||||||       |||||     
T  44104679 agactgtgtttggtaacaaaaaaaagctagcttatagtttgttggacaaacttataagcttgtcttgatagaatgagatgtgtttggtaaaaagcttttt 44104580  T
Q  252 tcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||| ||||||||||| |||||| | |||||| ||||||    
T  44104579 tcattagcttatagcattttttgaaaagctatttcaag 44104542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 46534407 - 46534467
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    |||||||||||  |||||| |||||||||||||||||||| || |||||||||| ||||||    
T  46534407 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagcttgtt 46534467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 43337626 - 43337685
Alignment:
Q  149 ctaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||||||||  || ||| |||||||||||||||||||| || ||||||||||    
T  43337626 ctaagactgtgtttggtaacataaaaaagctagcttatagcttgttggattagcttataa 43337685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 238
Target Start/End: Original strand, 42826000 - 42826082
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttgg 238  Q
    ||||||||||  |||||||||| ||| |||||||||||| |||   |||||||||||||||||||  ||| | ||||||||||    
T  42826000 tgtgtttggtaacacaaataagttagtttatagcttgttggacctacttataaacttgttttgatataataagacgtgtttgg 42826082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 27826708 - 27826761
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  27826708 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 27826761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 28494376 - 28494323
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  28494376 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 28494323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 30999443 - 30999374
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaat 225  Q
    ||||||||||  |||||||||| ||| ||||||||| || |||||||| |||| ||||||||||| ||||    
T  30999443 tgtgtttggtaacacaaataagttagtttatagcttattggactagctcataagcttgttttgataaaat 30999374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 35747024 - 35747089
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    |||||||||||  |||||| |||||||||||||||||||| ||| || ||||||  ||||||||||    
T  35747024 ctgtgtttggtaacacaaaaaagctagcttatagcttgttcgacaagtttataagattgttttgat 35747089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 42329123 - 42329070
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  42329123 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 42329070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 43156567 - 43156620
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  43156567 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 43156620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 14792204 - 14792164
Alignment:
Q  168 cacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||| ||||||||||||||||||| ||||||||||    
T  14792204 cacaaataagttagcttatagcttgttagattagcttataa 14792164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 553
Target Start/End: Original strand, 18805274 - 18805314
Alignment:
Q  513 aattgttggcaaaaagcatgtcaaaatctagtgagagaact 553  Q
    |||||||||| ||||||||||||||||||||| ||||||||    
T  18805274 aattgttggcgaaaagcatgtcaaaatctagtcagagaact 18805314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 36121431 - 36121495
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    ||||||||||  |||||| ||| ||||||||||||| || || |||||||||| |||||||||||    
T  36121431 tgtgtttggtaacacaaagaagatagcttatagcttattggattagcttataagcttgttttgat 36121495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 289
Target Start/End: Original strand, 42825855 - 42825988
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  ||| |||||| | ||||||| ||| || |||||  |||||| |||||||||||  ||| | | |||||| |       ||||| ||||    
T  42825855 tgtgtttggtaacacgaataagttcgcttataccttattggactaatttataagcttgttttgatttaataagatgtgtttagtaaaaagcttttttcac 42825954  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||| |||||||| ||||||    
T  42825955 tagcttatagcgttttttgagaagctatttcaag 42825988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 46536121 - 46536177
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaact 211  Q
    |||||||||||  |||||| |||||||||| ||||||||| || |||||||||||||    
T  46536121 ctgtgtttggtaacacaaaaaagctagcttgtagcttgttggattagcttataaact 46536177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 1602133 - 1602070
Alignment:
Q  175 aagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttgg 238  Q
    |||||| ||||||||||||| ||||||||||||| || ||||||||  ||||| | ||||||||    
T  1602133 aagctaacttatagcttgttggactagcttataagctagttttgatagaatgagatgtgtttgg 1602070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 6476926 - 6476985
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    ||||||||||  |||||| ||||||||||||||||| || || |||||||||| ||||||    
T  6476926 tgtgtttggtaacacaaaaaagctagcttatagcttcttggattagcttataagcttgtt 6476985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 30524049 - 30523994
Alignment:
Q  160 tttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    ||||||| ||||||||||||||||||||||||||| || || || |||| ||||||    
T  30524049 tttggtgacacaaataagctagcttatagcttgttggattaactcataagcttgtt 30523994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 47252934 - 47252977
Alignment:
Q  246 cttttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||||||||||| | |||||| ||||||    
T  47252934 cttttctcactagcttatagcgttttttgaaaagctatttcaag 47252977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 48935236 - 48935287
Alignment:
Q  157 gtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||  ||||||||||||||||||||||||||| || ||| ||||||    
T  48935236 gtgtttggtaacacaaataagctagcttatagcttgttggattagtttataa 48935287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 284
Target Start/End: Original strand, 18804362 - 18804400
Alignment:
Q  246 cttttctcactagcttatagcgttttttaagaagctaat 284  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  18804362 cttttctcactaacttatagcgttttttaagaagttaat 18804400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 3117399 - 3117318
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttg 237  Q
    ||||||||||  || ||||||| |||||||||| || ||| | |||||||||| |||||||||||   |||| |||||||||    
T  3117399 tgtgtttggtaacaaaaataagttagcttatagtttattatattagcttataagcttgttttgataggatgagacgtgtttg 3117318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 289
Target Start/End: Complemental strand, 8934905 - 8934868
Alignment:
Q  252 tcactagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  8934905 tcactaacttatagcgttttttaagaagttaattcaag 8934868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 42833824 - 42833759
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    |||||||||||   || ||||||||  ||||||||||||| |||||||| |||| |||||||||||    
T  42833824 ctgtgtttggtaatacgaataagctgacttatagcttgttggactagctgataagcttgttttgat 42833759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 4060352 - 4060404
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||  |||||| |||||||||||||| ||||| || ||||||||||    
T  4060352 tgtgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataa 4060404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 8934770 - 8934734
Alignment:
Q  385 tccactatcttattgaactaaccacgtttaccatgtt 421  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  8934770 tccaccatcttattaaactaaccacgtttaccatgtt 8934734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 25483604 - 25483656
Alignment:
Q  168 cacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    |||||||||||||||| ||||||| ||  | |||||||||||||| |||||||    
T  25483604 cacaaataagctagctaatagcttattgtattagcttataaacttattttgat 25483656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 28235277 - 28235337
Alignment:
Q  148 actaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||| ||||||||| |  || |||||||||||||||||| ||||| || ||||||||||    
T  28235277 actaaggctgtgtttgataacataaataagctagcttatagtttgttggattagcttataa 28235337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 28958221 - 28958169
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||  |||||| |||||||||||||||||||| || || |||||||    
T  28958221 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattaacttataa 28958169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 42265372 - 42265320
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||  | |||| |||||||||||||||||||| || ||||||||||    
T  42265372 tgtgtttggtaactcaaaaaagctagcttatagcttgttggattagcttataa 42265320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 46349984 - 46349924
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    |||||||||||  |||||| ||||||||||||||||| || || || ||||||| ||||||    
T  46349984 ctgtgtttggtaacacaaaaaagctagcttatagcttcttggattaacttataagcttgtt 46349924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 46350939 - 46350883
Alignment:
Q  152 agactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||||||  |||||| ||| |||||||||||||||| || ||| ||||||    
T  46350939 agactgtgtttggtaacacaaaaaagttagcttatagcttgttggattagtttataa 46350883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 47252217 - 47252269
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||  ||| ||||||||| ||||||||||||| || ||||||||||    
T  47252217 tgtgtttggtaacacgaataagctaccttatagcttgttggattagcttataa 47252269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 2e-35; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 30411351 - 30411218
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||       ||||||||||    
T  30411351 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcac 30411252  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||||||||||| ||||    
T  30411251 tagcttatagcgttttttaagaagctaatccaag 30411218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 19912672 - 19912806
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||        ||||||||    
T  19912672 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagtttttctca 19912771  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||||||||||||| ||||    
T  19912772 ctagcttatagcgttttttaagaagctaatccaag 19912806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 45549652 - 45549781
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| |||||||||||||||||||| | ||||||||||| ||||||||||| |||||||| ||||||||       |||||||||    
T  45549652 ctgtgtttggtaacacaaaaaagctagcttatagcttgttgggctagcttataagcttgttttgataaaatgaaatgtgtttggtaaaaagcttttctca 45549751  T
Q  255 ctagcttatagcgttttttaagaagctaat 284  Q
    ||||||||||||| ||||||||||||||||    
T  45549752 ctagcttatagcgctttttaagaagctaat 45549781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 202284 - 202423
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttt 249  Q
    |||| |||||||||||  |||||| |||||||||||||||||||| || |||||||||| |||| |||||| |||| | ||||||||||       ||||    
T  202284 taaggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagcttgctttgataaaataagacgtgtttggtaaaaagcttt 202383  T
Q  250 tctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  202384 tctcactagcttatagcgttttttaagaagctaatccaag 202423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 158 - 289
Target Start/End: Original strand, 55660548 - 55660679
Alignment:
Q  158 tgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcacta 257  Q
    ||||||||  || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||| |||        |||| |||||||    
T  55660548 tgtttggtaacataaataagctagcttatagcttgttggactagcttataaacttgttttgatgaaatgagatgtgattgaaaaaaaactttactcacta 55660647  T
Q  258 gcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||| |||||||||||||    
T  55660648 gcttatagcgttttttaataagctaattcaag 55660679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 155 - 284
Target Start/End: Original strand, 55610662 - 55610791
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| || |||||||||||||||||  |||||||||||| ||||||||||| |||||| | ||||||||       |||||||||    
T  55610662 ctgtgtttggtaacacaaaaaaactagcttatagcttgttgtactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaaacttttctca 55610761  T
Q  255 ctagcttatagcgttttttaagaagctaat 284  Q
    ||||||||||||||||||||||||||||||    
T  55610762 ctagcttatagcgttttttaagaagctaat 55610791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 168 - 289
Target Start/End: Complemental strand, 1771927 - 1771806
Alignment:
Q  168 cacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcg 267  Q
    |||||| ||| |||||||||||||||| ||||||||||||| |||| |||||| |||||| | ||||||||       ||||||||||||||||||||||    
T  1771927 cacaaaaaagatagcttatagcttgttggactagcttataagcttgctttgataaaatgagatgtgtttggtaaaaagcttttctcactagcttatagcg 1771828  T
Q  268 ttttttaagaagctaattcaag 289  Q
    ||||||||||||||||| ||||    
T  1771827 ttttttaagaagctaatccaag 1771806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 30653498 - 30653631
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| ||||||| |||||||||||| || |||||||||| ||||||||||| |||||| ||||||||||       |||||||||    
T  30653498 ctgtgtttggtaacacaaaaaagctag-ttatagcttgttggattagcttataagcttgttttgataaaatgagacgtgtttggtaaaaagcttttctca 30653596  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    ||| ||||||||||||||||| |||||||| ||||    
T  30653597 ctatcttatagcgttttttaataagctaatccaag 30653631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 156 - 289
Target Start/End: Original strand, 48953030 - 48953163
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  |||  |||||||||||||||||||||| ||||||||||||| |||||||||||  ||| | | ||||||||        |||| ||||    
T  48953030 tgtgtttggtaacacggataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaaaagtttttttcac 48953129  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||||||||| ||||||    
T  48953130 tagcttatagcgttttttaagaagctatttcaag 48953163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 26923638 - 26923505
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  || ||| ||||||||||||| ||||||| |||||||||||| || ||||||||  ||||| | ||||||||       ||||||||||    
T  26923638 tgtgtttggtaacataaaaaagctagcttataacttgttaaactagcttataagctagttttgatagaatgagatgtgtttggtaaaaagcttttctcac 26923539  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||| |||| |||||||| ||||    
T  26923538 tagcttatagcgtttgttaataagctaatccaag 26923505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 20986267 - 20986356
Alignment:
Q  149 ctaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttgg 238  Q
    ||||| |||||||||||  || |||||||||| ||||||||||||| ||||| ||||||||||||||||||| |||||| | ||||||||    
T  20986267 ctaaggctgtgtttggtaacataaataagctaacttatagcttgttggactaacttataaacttgttttgataaaatgagatgtgtttgg 20986356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 50792516 - 50792382
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  ||| |||||||||| |||||||||||| ||||||||||||| |||||||||||  ||| | | ||||||||        |||| |||    
T  50792516 ctgtgtttggtaacacgaataagctagtttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaaaagtttttttca 50792417  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||| |||||| |||||||| ||||||    
T  50792416 ctagcttatagcattttttgagaagctatttcaag 50792382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 28459624 - 28459745
Alignment:
Q  168 cacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcg 267  Q
    |||||| ||| ||| |||||| ||||| ||||| ||||||| ||||||||||| |||||| | ||||||||       ||||||| ||||||||||| ||    
T  28459624 cacaaaaaagttagtttatagtttgttggactatcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttcttactagcttataacg 28459723  T
Q  268 ttttttaagaagctaattcaag 289  Q
    ||||||||||||||||| ||||    
T  28459724 ttttttaagaagctaatccaag 28459745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 289
Target Start/End: Complemental strand, 318749 - 318658
Alignment:
Q  198 ctagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||| ||||||||||| |||||| ||||||||||       ||||||||| ||||||||||||||||||||||||| ||| ||||    
T  318749 ctagcttataagcttgttttgataaaatgagacgtgtttggtaaaaagcttttctcattagcttatagcgttttttaagaagccaatccaag 318658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 158 - 289
Target Start/End: Complemental strand, 31624495 - 31624364
Alignment:
Q  158 tgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcacta 257  Q
    ||||||||  ||| ||||||| ||||||||| ||||||||||||||||||| |||||||||||  ||| | | |||| |||       ||||| ||||||    
T  31624495 tgtttggtaacacgaataagcgagcttatagtttgttagactagcttataagcttgttttgatataataagatgtgtctggttaaaaacttttttcacta 31624396  T
Q  258 gcttatagcgttttttaagaagctaattcaag 289  Q
    | |||||||||||||| |||||||| ||||||    
T  31624395 gtttatagcgttttttgagaagctatttcaag 31624364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 2390370 - 2390236
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| ||||||||||||||||| || ||||| |||||||  |||||||||   ||||| ||||||||||        ||||||||    
T  2390370 ctgtgtttggtaacacaaaaaagctagcttatagcttcttggactaacttataagtttgttttgaaagaatgagacgtgtttggtaaaaagtttttctca 2390271  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
     |||||||||||||||||| | |||||| ||||||    
T  2390270 ttagcttatagcgttttttgaaaagctatttcaag 2390236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 10658983 - 10658849
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  ||| ||| |||||||||||||||| || ||||||||||||| |||||||||||  ||| | | | ||||||       ||||| |||    
T  10658983 ctgtgtttggtaacacgaattagctagcttatagcttattggactagcttataagcttgttttgatataataagatgcgtttggtaaaaagcttttttca 10658884  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||| |||||| |||||||| ||||||    
T  10658883 ctagcttatagcattttttgagaagctatttcaag 10658849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 10873128 - 10872994
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  ||| ||| |||||||||||||||| || ||||||||||||| |||||||||||  ||| | | | ||||||       ||||| |||    
T  10873128 ctgtgtttggtaacacgaattagctagcttatagcttattggactagcttataagcttgttttgatataataagatgcgtttggtaaaaagcttttttca 10873029  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||| |||||| |||||||| ||||||    
T  10873028 ctagcttatagcattttttgagaagctatttcaag 10872994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 147 - 289
Target Start/End: Complemental strand, 48369077 - 48368935
Alignment:
Q  147 cactaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnnc 246  Q
    ||||||| |||||| ||||  ||||||||||||||  ||||||||||| |||||||||||||  ||||||||||  ||||  | ||||||||       |    
T  48369077 cactaaggctgtgtctggtaacacaaataagctagtgtatagcttgttggactagcttataagattgttttgatagaatgtgatgtgtttggtaaaaaac 48368978  T
Q  247 ttttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||| | ||| |||||||||||||||| |||||||| ||||    
T  48368977 ttttcttattagtttatagcgttttttaataagctaatccaag 48368935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 156 - 289
Target Start/End: Original strand, 51924026 - 51924160
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  |||||| || |||| |||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||         ||||||||    
T  51924026 tgtgtttggtaacacaaaaaaactagtttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaaaaatttctcac 51924125  T
Q  256 tagcttatagcg-ttttttaagaagctaattcaag 289  Q
    || ||||| ||| ||||||||||||||||| ||||    
T  51924126 taacttattgcgtttttttaagaagctaatccaag 51924160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 19871075 - 19871008
Alignment:
Q  153 gactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    |||||||||||||  ||| ||||||||||||||||||||| | ||||||||||||| |||||||||||    
T  19871075 gactgtgtttggtaacacgaataagctagcttatagcttgctggactagcttataaccttgttttgat 19871008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 158 - 289
Target Start/End: Original strand, 49646027 - 49646156
Alignment:
Q  158 tgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcacta 257  Q
    ||||||||  ||| |||||| ||||||||||| |||| || |||||||||| |||||||||||  |||  || ||||||||       ||||| ||||||    
T  49646027 tgtttggtaacacgaataagttagcttatagcctgttggattagcttataagcttgttttgatataat--aatgtgtttggtaaaaagcttttttcacta 49646124  T
Q  258 gcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||| |||||||| ||||||    
T  49646125 gcttatagcgttttttgagaagctatttcaag 49646156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 158 - 289
Target Start/End: Original strand, 50790826 - 50790960
Alignment:
Q  158 tgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcacta 257  Q
    ||||||||  ||| |||||||||||||||| |||||| ||||||||||||| |||||||||||  ||| | | ||||||||       ||||| ||| ||    
T  50790826 tgtttggtaacacgaataagctagcttataacttgttggactagcttataagcttgttttgatataataagatgtgtttggtgaaaagcttttttcatta 50790925  T
Q  258 gcttatagcg---ttttttaagaagctaattcaag 289  Q
    ||||||||||   ||||||||||||||| ||||||    
T  50790926 gcttatagcgtttttttttaagaagctatttcaag 50790960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 153 - 289
Target Start/End: Complemental strand, 7113617 - 7113477
Alignment:
Q  153 gactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttata----aacttgttttgatgaaatgaaacgtgtttggnnnnnnnctt 248  Q
    |||||||||||||  || ||| |||||||||||||||||||| ||||||||||||    | || ||||||||  ||||| | ||||||||       |||    
T  7113617 gactgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagctagctagttttgatagaatgagatgtgtttggtaaaaagctt 7113518  T
Q  249 ttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||| ||||||||| || ||||| ||||    
T  7113517 ttctcactagcttatagtgttttttaataaactaatccaag 7113477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 19869959 - 19870093
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  ||| |||||||||||||||||||| ||  |||||||||||| |||||||||||  ||| | | | |||| |       ||||| |||    
T  19869959 ctgtgtttggtaacacgaataagctagcttatagcttattgaactagcttataagcttgttttgatataataagatgcgtttagtaaaatgcttttttca 19870058  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||| |||| ||| ||||||    
T  19870059 ctagcttatagcgttttttgagaatctatttcaag 19870093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 43590533 - 43590598
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    |||||||||||  ||| ||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  43590533 ctgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagtttgttttgat 43590598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 14269923 - 14269864
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgt 214  Q
    |||||||||||  ||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  14269923 ctgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgt 14269864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 27531829 - 27531894
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    |||||||||||  |||||||| |||| ||||||||||||| |||||| |||||| |||||||||||    
T  27531829 ctgtgtttggtaacacaaataggctaacttatagcttgttggactagtttataagcttgttttgat 27531894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 49648916 - 49648859
Alignment:
Q  159 gtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttt 216  Q
    |||||||  ||| ||||||||||||||||||||||| ||||||||||||| |||||||    
T  49648916 gtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttt 49648859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 7113691 - 7113627
Alignment:
Q  153 gactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtttt 217  Q
    ||||||||||| |  ||| |||| |||||||||||||||||| ||||||||||||| ||||||||    
T  7113691 gactgtgtttgctaacaccaatacgctagcttatagcttgttggactagcttataagcttgtttt 7113627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 24152676 - 24152728
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||| ||||||    
T  24152676 tgtgtttggtaacacaaataagctagcttatagcttgttggactagtttataa 24152728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 289
Target Start/End: Original strand, 20987058 - 20987100
Alignment:
Q  247 ttttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  20987058 ttttctcactagcttatagagttttctaagaagctaattcaag 20987100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 43374589 - 43374647
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||||||||  |||||| | |||||||||||||||||| || ||||||||||    
T  43374589 taagactgtgtttggtaacacaaaaatgctagcttatagcttgttggattagcttataa 43374647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 54683596 - 54683730
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatg-aaatgaaacgtgtttggnnnnnnncttttctc 253  Q
    |||||||||||  || ||||||||||||||||| ||||||||| |||||||||| || | || |||| ||| |  ||||||||||       ||||||||    
T  54683596 ctgtgtttggtaacataaataagctagcttataacttgttagattagcttataagctcg-ttggatgaaaacgtgacgtgtttggtaacaagcttttctc 54683694  T
Q  254 actagcttatagcgttttttaagaagctaattcaag 289  Q
    |  |||||||| |||||||| | |||||||||||||    
T  54683695 atgagcttataacgttttttgaaaagctaattcaag 54683730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 6238187 - 6238240
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  6238187 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 6238240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 19801963 - 19801910
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  19801963 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 19801910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 148 - 289
Target Start/End: Original strand, 28778548 - 28778689
Alignment:
Q  148 actaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatg-aaatgaaacgtgtttggnnnnnnnc 246  Q
    |||||| |||||||||||  || ||||||||||| ||||||||||||||| || ||||| || ||  || |||| ||| |  ||||||||||       |    
T  28778548 actaaggctgtgtttggtaacataaataagctagtttatagcttgttagattaacttat-aagttcattggatgaaaacgtgacgtgtttggtaacaagc 28778646  T
Q  247 ttttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||| ||| ||||||||||||| | |||||||||||||    
T  28778647 ttttctcacgagcatatagcgttttttgaaaagctaattcaag 28778689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 45618061 - 45618122
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtttt 217  Q
    ||||||||||  || |||||||||||||||| | |||||||||||||||||||  |||||||    
T  45618061 tgtgtttggtaacataaataagctagcttatggtttgttagactagcttataagtttgtttt 45618122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 49335291 - 49335238
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  49335291 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 49335238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 53284006 - 53284059
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  53284006 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 53284059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 39840294 - 39840242
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  39840294 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 39840242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 55496137 - 55496077
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    |||| ||||||  |||||| ||| |||||||||||||||| ||||||||||||| ||||||    
T  55496137 ctgtttttggtaacacaaaaaagttagcttatagcttgttggactagcttataagcttgtt 55496077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 30653390 - 30653331
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    ||||||||||  |||||| ||| |||||||| ||||||| ||||||||||||| ||||||    
T  30653390 tgtgtttggtaacacaaaaaagttagcttatggcttgttggactagcttataagcttgtt 30653331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 37114532 - 37114481
Alignment:
Q  157 gtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  37114532 gtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 37114481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 43940130 - 43940087
Alignment:
Q  246 cttttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||| |||||||||||||||||||||| |||||||| ||||||    
T  43940130 cttttttcactagcttatagcgttttttgagaagctatttcaag 43940087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 289
Target Start/End: Original strand, 31997922 - 31997964
Alignment:
Q  247 ttttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    |||| ||||||| ||||||||||||||||||||||||| ||||    
T  31997922 ttttttcactagtttatagcgttttttaagaagctaatccaag 31997964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 34438079 - 34438125
Alignment:
Q  171 aaataagctagcttatagcttgttagactagcttataaacttgtttt 217  Q
    ||||||| |||||||||| ||||| ||||| ||||||||||||||||    
T  34438079 aaataagttagcttatagtttgttggactatcttataaacttgtttt 34438125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 53431629 - 53431763
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatga-aacgtgtttggnnnnnnncttttctc 253  Q
    |||||||||||  |||||| ||  |||||||||||||||| |||||||||||||  ||| || |||||||  |  | ||||||||       ||||||||    
T  53431629 ctgtgtttggtaacacaaaaaatgtagcttatagcttgttggactagcttataagtttg-ttggatgaaaacatgatgtgtttggtaacaaacttttctc 53431727  T
Q  254 actagcttatagcgttttttaagaagctaattcaag 289  Q
    || |||||||||| ||| || |||||||||||||||    
T  53431728 acgagcttatagcttttcttgagaagctaattcaag 53431763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 6287836 - 6287889
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| ||| ||||||||||||| ||||| ||||||||||    
T  6287836 ctgtgtttggtaacacaaaaaagttagcttatagcttcttagattagcttataa 6287889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 33984087 - 33984140
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| ||||||||||||||||||||  | ||||||||||    
T  33984087 ctgtgtttggtaacacaaaaaagctagcttatagcttgttgaattagcttataa 33984140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 45561415 - 45561363
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  45561415 ctgtgtttggtaacacaaa-aagctagcttatagcttgttggattagcttataa 45561363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 55001844 - 55001791
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| || ||||||||||||||||| || ||||||||||    
T  55001844 ctgtgtttggtaacacaaaaaaactagcttatagcttgttggattagcttataa 55001791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 423
Target Start/End: Original strand, 55660777 - 55660814
Alignment:
Q  386 ccactatcttattgaactaaccacgtttaccatgttgt 423  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  55660777 ccactatcttattaaaccaaccacgtttaccatgttgt 55660814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 36181470 - 36181414
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaact 211  Q
    |||||||||||  |||||| |||||| ||||||| |||||| | |||||||||||||    
T  36181470 ctgtgtttggtaacacaaaaaagctaacttatagtttgttaaattagcttataaact 36181414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 51941119 - 51941155
Alignment:
Q  172 aataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  51941119 aataagctagcttatagcttgttggactaacttataa 51941155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 3e-34; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 40374613 - 40374474
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttt 249  Q
    |||| |||||||||||  |||||| |||||| ||||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||       ||||    
T  40374613 taaggctgtgtttggtaacacaaaaaagctaacttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttt 40374514  T
Q  250 tctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  40374513 tctcactagcttatagcgttttttaagaagctaatccaag 40374474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 32111659 - 32111526
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||       ||||||||||    
T  32111659 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcac 32111560  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||| ||||||||||||||||| ||||    
T  32111559 tagcttatagcattttttaagaagctaatccaag 32111526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 40980239 - 40980106
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  |||||| || ||||||||||| |||||  |||||||||||||||||||||||| |||||| | ||||||||       ||||||||||    
T  40980239 tgtgtttggtaacacaaaaaaactagcttatagtttgttgaactagcttataaacttgttttgataaaatgagatgtgtttggtaaaaagcttttctcac 40980140  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||| |||||||| ||||    
T  40980139 tagcttatagcgttttttaaaaagctaatccaag 40980106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 149 - 289
Target Start/End: Complemental strand, 36660242 - 36660102
Alignment:
Q  149 ctaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnnctt 248  Q
    ||||| || ||||||||  |||||| |||||||||||||| ||||| || |||||||||| ||||||||||| |||||| || |||||||       |||    
T  36660242 ctaaggctatgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataagcttgttttgataaaatgagacttgtttggtaaaaagctt 36660143  T
Q  249 ttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||||||||||||| |||| ||||    
T  36660142 ttctcactagcttatagcgttttttaagaagttaatccaag 36660102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 46668340 - 46668474
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  || ||| |||||||||||||||||||| ||||| ||||||| ||||||||||| |||| | | ||||||||       |||||| ||    
T  46668340 ctgtgtttggtaacataaaaaagctagcttatagcttgttggactaacttataagcttgttttgataaaataagatgtgtttggtaaaaagcttttcaca 46668439  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||||||||||||| ||||    
T  46668440 ctagcttatagcgttttttaagaagctaatccaag 46668474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 289
Target Start/End: Original strand, 6586257 - 6586398
Alignment:
Q  148 actaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnnct 247  Q
    |||||| |||||||||||  || ||| ||| ||| |||||| ||||| ||||||||||||| ||||||||||| |||||| | ||||||||       ||    
T  6586257 actaaggctgtgtttggtaacataaaaaagttagtttatagtttgttggactagcttataagcttgttttgataaaatgatatgtgtttggtaaaaagct 6586356  T
Q  248 tttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||||||||| ||||||||| ||||    
T  6586357 tttctcactagcttatagcgttttttaggaagctaatccaag 6586398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 12122981 - 12122847
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||||  |  ||||| ||||||||||       ||||| |||    
T  12122981 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgtttttgtagaatgagacgtgtttggtaaaaaacttttttca 12122882  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
     |||||||||||||||||| | |||||||||||||    
T  12122881 ttagcttatagcgttttttgataagctaattcaag 12122847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 32390190 - 32390080
Alignment:
Q  179 tagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcgttttttaagaa 278  Q
    |||||||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||        |||||||||||||||||| |||||||||||||    
T  32390190 tagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagtttttctcactagcttataccgttttttaagaa 32390091  T
Q  279 gctaattcaag 289  Q
    |||||| ||||    
T  32390090 gctaatccaag 32390080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 36806934 - 36807055
Alignment:
Q  168 cacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcg 267  Q
    |||||| ||||||| || ||||||||| ||||||||||||| ||||||||||| |||||| | |||||||        ||||||||||| ||||||||||    
T  36806934 cacaaaaaagctagtttttagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttgataaaaagcttttctcactggcttatagcg 36807033  T
Q  268 ttttttaagaagctaattcaag 289  Q
    ||||||||||||||||| ||||    
T  36807034 ttttttaagaagctaatccaag 36807055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 156 - 288
Target Start/End: Original strand, 39129374 - 39129506
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  || ||| |||||||||||||||||||| ||||| ||||||| || ||||||||  ||||| |  |||||||       | ||||||||    
T  39129374 tgtgtttggtaacataaaaaagctagcttatagcttgttggactatcttataagctagttttgatagaatgagatatgtttggtaaaaagcgtttctcac 39129473  T
Q  256 tagcttatagcgttttttaagaagctaattcaa 288  Q
    |||||||||||||||||||||||||||||||||    
T  39129474 tagcttatagcgttttttaagaagctaattcaa 39129506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 5505931 - 5506065
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| ||||||||||||| |||||| |||||||||||||  ||||||||||  ||||| | ||||||||       ||||||| |    
T  5505931 ctgtgtttggtaacacaaaaaagctagcttataacttgttggactagcttataagtttgttttgatagaatgagatgtgtttggtaaaaaacttttctta 5506030  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||| || |||||||||| |||||||||||||    
T  5506031 ctagcttctaacgttttttaaaaagctaattcaag 5506065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 34785978 - 34785844
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||| ||||||||||||||||||| || ||||||||||||| |||||||||||  ||| | ||||||||||       |||||||||    
T  34785978 ctgtgtttggtaacacacataagctagcttatagcttattggactagcttataagcttgttttgatagaataagacgtgtttggtaaatagcttttctca 34785879  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    ||| ||||||  ||||||| ||| |||| ||||||    
T  34785878 ctaacttataatgttttttgagatgctatttcaag 34785844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 172 - 289
Target Start/End: Original strand, 48071992 - 48072109
Alignment:
Q  172 aataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcgtttt 271  Q
    ||||| ||||||||||||||||| ||||||||||||| |||||||||||  ||| | | ||||||||       |||||  |||||||||||||||||||    
T  48071992 aataaactagcttatagcttgttggactagcttataagcttgttttgatacaataagatgtgtttggtaaaaagctttttccactagcttatagcgtttt 48072091  T
Q  272 ttaagaagctaattcaag 289  Q
    || |||||||| ||||||    
T  48072092 ttgagaagctatttcaag 48072109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 157 - 289
Target Start/End: Original strand, 46114989 - 46115121
Alignment:
Q  157 gtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcact 256  Q
    |||||||||  ||||||||||||||||||||||||||| || |||||||||| |||||||||||  |||  || ||||||||        ||||||||||    
T  46114989 gtgtttggtaacacaaataagctagcttatagcttgttggattagcttataagcttgttttgatagaatataatgtgtttggtaaaaagtttttctcact 46115088  T
Q  257 agcttatagcgttttttaagaagctaattcaag 289  Q
    | |||||||| ||||| || |||||||| ||||    
T  46115089 aacttatagcttttttaaaaaagctaatccaag 46115121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 38732206 - 38732283
Alignment:
Q  212 tgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||| |||||| ||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||    
T  38732206 tgttttgataaaatgagacgtgtttggtaaaaagcttttctcactagcttatagcgttttttaagaagctaatccaag 38732283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 42167431 - 42167367
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    ||||||||||  ||| ||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  42167431 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttttgat 42167367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 273
Target Start/End: Original strand, 50935713 - 50935830
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  ||| |||||||||||||||||||| || ||||||||||||| |||||||||||  ||| | | |||||||        ||||| ||||    
T  50935713 tgtgtttggtaacacgaataagctagcttatagcttattggactagcttataagcttgttttgatataataatatgtgtttgataaaatgcttttttcac 50935812  T
Q  256 tagcttatagcgtttttt 273  Q
    ||||||||||||||||||    
T  50935813 tagcttatagcgtttttt 50935830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 172 - 288
Target Start/End: Original strand, 7041746 - 7041862
Alignment:
Q  172 aataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcgtttt 271  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||  ||| | | ||||||||        |||| ||||| |||||||| |||||    
T  7041746 aataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaaaagtttttttcacttgcttatagtgtttt 7041845  T
Q  272 ttaagaagctaattcaa 288  Q
    || |||||||| |||||    
T  7041846 ttgagaagctatttcaa 7041862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 41888808 - 41888873
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    |||||||||||  ||| ||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  41888808 ctgtgtttggtaacacgaataagctagcttatagtttgttggactagcttataagcttgttttgat 41888873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 48747403 - 48747537
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| ||| |||||||||| || || ||||||||||||| ||||||||  |  ||||| ||||||||||       ||||| |||    
T  48747403 ctgtgtttggtaacacaaaaaagttagcttatagtttattggactagcttataagcttgtttttgtagaatgagacgtgtttggtaaaaaacttttttca 48747502  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
     ||||||||||  |||||| |||||||||||||||    
T  48747503 ttagcttatagtattttttgagaagctaattcaag 48747537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 22978095 - 22978143
Alignment:
Q  172 aataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  22978095 aataagctagcttatagcttgttggactagcttataagcttgttttgat 22978143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 43860742 - 43860790
Alignment:
Q  172 aataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  43860742 aataagctagcttatagcttgttggactagcttataagcttgttttgat 43860790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 50938339 - 50938275
Alignment:
Q  153 gactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtttt 217  Q
    |||||||||||||  ||| |||||| |||||||||||||||| ||||||||||||| ||||||||    
T  50938339 gactgtgtttggtaacacgaataagttagcttatagcttgttggactagcttataaccttgtttt 50938275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 9558965 - 9558907
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||| |||||||||||  || ||||||||||||||||||||||||||| ||||||||||    
T  9558965 taaggctgtgtttggtaacataaataagctagcttatagcttgttagattagcttataa 9558907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 19274729 - 19274863
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatg-aaatgaaacgtgtttggnnnnnnncttttctc 253  Q
    |||||||||||  |||||| |||||||||||||||||||| || |||||||||| || | || |||| |||||  ||||||||||       ||||||||    
T  19274729 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcg-ttggatgaaaatgtgacgtgtttggtaacaagcttttctc 19274827  T
Q  254 actagcttatagcgttttttaagaagctaattcaag 289  Q
    || || |||||||||||||| | |||||| ||||||    
T  19274828 acgaggttatagcgttttttgaaaagctatttcaag 19274863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 199 - 289
Target Start/End: Original strand, 49918278 - 49918369
Alignment:
Q  199 tagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnn-cttttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||| ||||||||||| |||||| |||||||||         |||||||||||| |||||||||||||||||||||||||| ||||    
T  49918278 tagcttataagcttgttttgataaaatgagacgtgtttgataaaaaaacttttctcactaacttatagcgttttttaagaagctaatccaag 49918369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 42877239 - 42877304
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    |||||||||||  ||| |||||||||||||||||||| || ||||||||||||| | |||||||||    
T  42877239 ctgtgtttggtaacacgaataagctagcttatagcttcttggactagcttataagcatgttttgat 42877304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 32999765 - 32999697
Alignment:
Q  147 cactaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    ||||||||||||||||| |  |||||| ||||||||||||||||| || || |||||||||| ||||||    
T  32999765 cactaagactgtgtttgataacacaaaaaagctagcttatagcttcttggattagcttataagcttgtt 32999697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 41889520 - 41889456
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    ||||||||||  ||| ||||| ||||||||||||||||| |||||| |||||| |||||||||||    
T  41889520 tgtgtttggtaacacgaataaactagcttatagcttgttggactagtttataagcttgttttgat 41889456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 39129297 - 39129364
Alignment:
Q  153 gactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    |||||||| ||||  ||| ||||||||||  ||||||||||| ||||||||||||| |||||||||||    
T  39129297 gactgtgtgtggtaacacgaataagctagtctatagcttgttggactagcttataagcttgttttgat 39129364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 42528143 - 42528096
Alignment:
Q  168 cacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    |||||| |||||||||||||||||||| ||||||||||||| ||||||    
T  42528143 cacaaaaaagctagcttatagcttgttggactagcttataagcttgtt 42528096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 44896075 - 44896032
Alignment:
Q  246 cttttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  44896075 cttttttcactagcttatagggttttttaagaagctaattcaag 44896032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 8321536 - 8321478
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||| |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  8321536 taaggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 8321478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 41991784 - 41991731
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  41991784 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 41991731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 51980726 - 51980791
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    |||| |||||||||||  |||||| ||| ||| |||||||||||| ||||||||||||| ||||||    
T  51980726 taaggctgtgtttggtaacacaaaaaagttagtttatagcttgttggactagcttataagcttgtt 51980791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 34436074 - 34436022
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  34436074 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 34436022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 39535041 - 39534958
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttgg 238  Q
    |||||||||||  || |||||||||||||| |||||| || ||| ||||||||| ||| |||||||  ||||| | ||||||||    
T  39535041 ctgtgtttggtaacagaaataagctagcttgtagcttattggacaagcttataagctttttttgatagaatgagatgtgtttgg 39534958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 52184932 - 52184874
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||| |||||||||||  |||||| ||| ||||||||||||||||||| || |||||||    
T  52184932 taaggctgtgtttggtaacacaaaaaagttagcttatagcttgttagattaacttataa 52184874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 289
Target Start/End: Complemental strand, 2229172 - 2229135
Alignment:
Q  252 tcactagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  2229172 tcactagcttatagcgttttttgagaagctatttcaag 2229135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 4070815 - 4070868
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||||||||||| |||||| |||||  ||||||||||||    
T  4070815 ctgtgtttggtaacacaaataagctagtttatagtttgttgaactagcttataa 4070868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 12055615 - 12055562
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||| ||||| || ||||||||||    
T  12055615 ctgtgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataa 12055562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 22978174 - 22978211
Alignment:
Q  252 tcactagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  22978174 tcactagcttatagcgttttttgagaagctatttcaag 22978211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 2229269 - 2229205
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    ||||||||||  ||| ||||| |||| ||||||||| || ||||| ||||||| |||||||||||    
T  2229269 tgtgtttggtaacacgaataatctagtttatagcttattggactatcttataaccttgttttgat 2229205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 48104971 - 48104931
Alignment:
Q  247 ttttctcactagcttatagcgttttttaagaagctaattca 287  Q
    ||||||||| |||||||||| ||||||||||||||| ||||    
T  48104971 ttttctcacgagcttatagctttttttaagaagctatttca 48104931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 52959292 - 52959344
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||  ||||||||||||||||||||| ||||| || || |||||||    
T  52959292 tgtgtttggtaacacaaataagctagcttatagtttgttggattaacttataa 52959344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 1e-33; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 5698125 - 5698259
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| | |||||||        |||||||||    
T  5698125 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttgataaaaagcttttctca 5698224  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||||||||||||| ||||    
T  5698225 ctagcttatagcgttttttaagaagctaatccaag 5698259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 14390421 - 14390555
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||||| ||||||||        ||||||||    
T  14390421 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgaaatgtgtttggtaaaaagtttttctca 14390520  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||| ||||||||||| ||||    
T  14390521 ctagcttatagcgtttttaaagaagctaatccaag 14390555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 168 - 289
Target Start/End: Complemental strand, 39325604 - 39325483
Alignment:
Q  168 cacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcg 267  Q
    |||||| ||||||||||||||||||||  |||||||||||| ||||||||||| |||||| ||||||||||       ||||||||||||||||||||||    
T  39325604 cacaaaaaagctagcttatagcttgttgaactagcttataagcttgttttgataaaatgagacgtgtttggtaaaaagcttttctcactagcttatagcg 39325505  T
Q  268 ttttttaagaagctaattcaag 289  Q
    ||||||||||||||||| ||||    
T  39325504 ttttttaagaagctaatccaag 39325483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 30899527 - 30899388
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttt 249  Q
    |||| |||||||||||  |||||| |||||||||||||||||||| ||||||||||||    ||||||||| |||||||| ||||||||       ||||    
T  30899527 taaggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttatatgtctgttttgataaaatgaaatgtgtttggtaaaaagcttt 30899428  T
Q  250 tctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  30899427 tctcactagcttacagcgttttttaagaagctaattcaag 30899388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 156 - 289
Target Start/End: Original strand, 31656369 - 31656502
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  |||||| ||||||| |||||||||||| |||||||||| || ||||||||||| |||||| | ||||||||       ||||||||||    
T  31656369 tgtgtttggtaacacaaaaaagctagtttatagcttgttggactagcttacaagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcac 31656468  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||||||||||| ||||    
T  31656469 tagcttatagcgttttttaagaagctaatccaag 31656502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 3796069 - 3795930
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttt 249  Q
    |||| |||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||          |    
T  3796069 taaggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaaaaaat 3795970  T
Q  250 tctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  3795969 tctcactagcttatagcgttttttaagaagctaatccaag 3795930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 9223839 - 9223973
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| |||||| ||||||||||||| ||||| ||||||| ||||||||||| |||| | | ||||||||       |||||||||    
T  9223839 ctgtgtttggtaacacaaaaaagctaacttatagcttgttggactaacttataagcttgttttgataaaataagatgtgtttggtaaaaagcttttctca 9223938  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||||||||||||| ||||    
T  9223939 ctagcttatagcgttttttaagaagctaatccaag 9223973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 284
Target Start/End: Complemental strand, 42628325 - 42628189
Alignment:
Q  148 actaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnnct 247  Q
    |||||| || ||||||||   ||||| ||||||| |||||||||||| ||||||||||||| |||| |||||| |||||| | ||||||||       ||    
T  42628325 actaaggctctgtttggtaatacaaaaaagctagtttatagcttgttggactagcttataagcttgctttgataaaatgagatgtgtttggtaaaaagct 42628226  T
Q  248 tttctcactagcttatagcgttttttaagaagctaat 284  Q
    |||||||||||||||||||||||||||||||||||||    
T  42628225 tttctcactagcttatagcgttttttaagaagctaat 42628189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 5698507 - 5698640
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| |||||||||||||||||||| ||||| ||||||| ||||||| ||| |||||| | |||||||        |||||||||    
T  5698507 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggactaacttataagcttgttt-gataaaatgagatgtgtttgataaaaagcttttctca 5698605  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||||||||||||| ||||    
T  5698606 ctagcttatagcgttttttaagaagctaatccaag 5698640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 35179819 - 35179953
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  || ||| |||||||||||||||||||| |||||||||||||  |||||||||| |||||| | |||||||        |||||||||    
T  35179819 ctgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagtttgttttgataaaatgagatgtgtttgataaaaagcttttctca 35179918  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
     ||||||||||||||||||||||||||||| ||||    
T  35179919 atagcttatagcgttttttaagaagctaatccaag 35179953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 31496609 - 31496743
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||| ||||||||||||||||||| || |||||||||||||||||||||| ||  ||||| | ||||||||        ||||||||    
T  31496609 ctgtgtttggtaacacagataagctagcttatagcttcttggactagcttataaacttgttttaatagaatgagatgtgtttggtaaaaagtttttctca 31496708  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
     ||||||||| |||||||| | |||||||||||||    
T  31496709 ttagcttatatcgttttttgaaaagctaattcaag 31496743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 38667185 - 38667324
Alignment:
Q  154 actgtgtttggtgccacaaataagctagcttatagcttgttag----actagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttt 249  Q
    ||||||||||||  |||||| ||| ||| |||||||| ||| |    |||||||||||| ||||||||||| |||||| | ||||||||       ||||    
T  38667185 actgtgtttggtaacacaaaaaagttagtttatagctagtttgttgaactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttt 38667284  T
Q  250 tctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  38667285 tctcactagcttatagcgttttttaagaagttaatccaag 38667324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 172 - 289
Target Start/End: Complemental strand, 44300027 - 44299910
Alignment:
Q  172 aataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcgtttt 271  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||  ||| | | ||||||||       ||||| | |||||||||| |||||||    
T  44300027 aataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaaaagcttttttaactagcttatggcgtttt 44299928  T
Q  272 ttaagaagctaattcaag 289  Q
    || |||||||| ||||||    
T  44299927 ttgagaagctatttcaag 44299910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 158 - 288
Target Start/End: Complemental strand, 4361157 - 4361027
Alignment:
Q  158 tgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcacta 257  Q
    ||||||||  |||||| ||| |||||||||| || || ||||||||||||| |||||||| ||  ||||| | ||||||||       ||||||| | ||    
T  4361157 tgtttggtaacacaaaaaagttagcttatagtttattggactagcttataagcttgttttaatagaatgagatgtgtttggtaaaaaacttttcttatta 4361058  T
Q  258 gcttatagcgttttttaagaagctaattcaa 288  Q
    ||||||||| |||||||||||||||||||||    
T  4361057 gcttatagcattttttaagaagctaattcaa 4361027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 27667674 - 27667808
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  ||||||  || ||| ||||||||| ||  ||||||||||||  |||||||||| |||||| | ||||||||       ||||| |||    
T  27667674 ctgtgtttggtaacacaaaatagttagtttatagcttattgaactagcttataagtttgttttgataaaatgagatgtgtttggtaaaaaacttttttca 27667773  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||| |||||||||||||||||||||| ||||    
T  27667774 ctagcttttagcgttttttaagaagctaatccaag 27667808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 4640192 - 4640128
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    ||||||||||  ||| ||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  4640192 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttttgat 4640128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 44110019 - 44109967
Alignment:
Q  168 cacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  44110019 cacaaataagctagcttatagcttgttggactagcttataagcttgttttgat 44109967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 196 - 284
Target Start/End: Complemental strand, 18545656 - 18545568
Alignment:
Q  196 gactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcgttttttaagaagctaat 284  Q
    ||||||||||||| ||||||||||| |||||| | ||||||||       |||||||||||||||||||||||||||| ||||| ||||    
T  18545656 gactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcactagcttatagcgttttttcagaagataat 18545568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 38058749 - 38058808
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    ||||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||    
T  38058749 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataaccttgtt 38058808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 156 - 287
Target Start/End: Original strand, 23259085 - 23259215
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  ||| |||||| |||||||||||||||| |||||||||||||  ||||||||||  ||| | | ||||||||       ||||| ||||    
T  23259085 tgtgtttggtaacacgaataagttagcttatagcttgttggactagcttataagtttgttttgatataataagatgtgtttggtagaaagctttt-tcac 23259183  T
Q  256 tagcttatagcgttttttaagaagctaattca 287  Q
    ||||||||| | |||||| |||||||| ||||    
T  23259184 tagcttatatcattttttgagaagctatttca 23259215  T

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Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 11756974 - 11756907
Alignment:
Q  153 gactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    |||||||||||||  ||| |||||||||||||||  |||||| ||||||||||||| || ||||||||    
T  11756974 gactgtgtttggtaacacgaataagctagcttatgacttgttggactagcttataagctcgttttgat 11756907  T

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Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 39325605 - 39325663
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||| |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  39325605 taaggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 39325663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 2459746 - 2459693
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  2459746 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 2459693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 27747606 - 27747659
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  27747606 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 27747659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 30358073 - 30358126
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  30358073 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 30358126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 43847529 - 43847464
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    |||||||||||  ||| ||||||||||||||||| ||||  ||||||||||||| || ||||||||    
T  43847529 ctgtgtttggtaacacgaataagctagcttatagtttgtcggactagcttataagctagttttgat 43847464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 44278065 - 44278012
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||| |  ||||||||||||| ||||||||||||| |||||||||||||    
T  44278065 ctgtgtttgataacacaaataagctaacttatagcttgttggactagcttataa 44278012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 41865286 - 41865346
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    |||||||||||  |||||| ||||||||||||||||| || || |||||||||| ||||||    
T  41865286 ctgtgtttggtaacacaaaaaagctagcttatagcttcttggattagcttataagcttgtt 41865346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 289
Target Start/End: Original strand, 42159612 - 42159745
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  ||| ||||||||||||||||||||||| || ||||||| |   ||||||||||  ||| | | |||||||        ||||| ||||    
T  42159612 tgtgtttggtaacacgaataagctagcttatagcttgttggaatagcttaaatgtttgttttgatataataagatgtgtttgctaaaaagcttttttcac 42159711  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||| |||| ||||| || ||||||    
T  42159712 tagcttatagcgtgttttgagaagttatttcaag 42159745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 50586278 - 50586226
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  50586278 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 50586226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 40640678 - 40640741
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttg 218  Q
    |||||||||||  || ||||||| ||||||||||||| | | |||||||||||| |||||||||    
T  40640678 ctgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 40640741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 205
Target Start/End: Complemental strand, 50814258 - 50814223
Alignment:
Q  170 caaataagctagcttatagcttgttagactagctta 205  Q
    |||||||||||||||||||||| |||||||||||||    
T  50814258 caaataagctagcttatagcttattagactagctta 50814223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 284
Target Start/End: Complemental strand, 18545282 - 18545244
Alignment:
Q  246 cttttctcactagcttatagcgttttttaagaagctaat 284  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  18545282 ctttgctcactagcttatagcgttttttcagaagctaat 18545244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 289
Target Start/End: Original strand, 20003990 - 20004032
Alignment:
Q  247 ttttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||| ||||||||||||||||||||| | |||||||||||||    
T  20003990 ttttcacactagcttatagcgttttttgataagctaattcaag 20004032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 11332841 - 11332894
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| ||||||| |||||| ||||| |||||||||||||    
T  11332841 ctgtgtttggtaacacaaaaaagctagtttatagtttgttggactagcttataa 11332894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 11490862 - 11490915
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| ||||||| |||||| ||||| |||||||||||||    
T  11490862 ctgtgtttggtaacacaaaaaagctagtttatagtttgttggactagcttataa 11490915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 28955655 - 28955602
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  || ||| |||||| |||||||||||||||| ||||||||||    
T  28955655 ctgtgtttggtaacataaaaaagctaacttatagcttgttagattagcttataa 28955602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 38815649 - 38815596
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||| ||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  38815649 ctgtatttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 38815596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 4638488 - 4638524
Alignment:
Q  252 tcactagcttatagcgttttttaagaagctaattcaa 288  Q
    |||||||||||||||||||||| |||||||| |||||    
T  4638488 tcactagcttatagcgttttttgagaagctatttcaa 4638524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 11823584 - 11823636
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||  |||||| ||||||| |||||||||||| || ||||||||||    
T  11823584 tgtgtttggtaacacaaaaaagctagtttatagcttgttggattagcttataa 11823636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 25365760 - 25365812
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||  || ||||||| ||||||||||||||||||| || |||||||    
T  25365760 tgtgtttggtaacataaataagttagcttatagcttgttagattaacttataa 25365812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 4e-33; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 155 - 284
Target Start/End: Complemental strand, 3078641 - 3078512
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| ||| ||||||||| |||||| ||||||||||||||||||||||||| |||||| ||||||||||        ||||||||    
T  3078641 ctgtgtttggtaacacaaaaaagttagcttataacttgttggactagcttataaacttgttttgataaaatgagacgtgtttggtaaaaagtttttctca 3078542  T
Q  255 ctagcttatagcgttttttaagaagctaat 284  Q
    ||||||||||||||||||||||||||||||    
T  3078541 ctagcttatagcgttttttaagaagctaat 3078512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 156 - 289
Target Start/End: Original strand, 13018994 - 13019127
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  |||||| ||||||||||||| |||||| |||||||||||||  |||||||||| |||||| | ||||||||       ||||||||||    
T  13018994 tgtgtttggtaacacaaaaaagctagcttataacttgttggactagcttataagtttgttttgataaaatgagatgtgtttggtaaaaagcttttctcac 13019093  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||||||||||| ||||    
T  13019094 tagcttatagcgttttttaagaagctaatccaag 13019127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 168 - 289
Target Start/End: Complemental strand, 20017393 - 20017272
Alignment:
Q  168 cacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcg 267  Q
    |||||| || ||||||||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||        ||||||||||||||||||||     
T  20017393 cacaaaaaaactagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagtttttctcactagcttatagca 20017294  T
Q  268 ttttttaagaagctaattcaag 289  Q
    ||||||||||||||||| ||||    
T  20017293 ttttttaagaagctaatccaag 20017272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 156 - 284
Target Start/End: Original strand, 8520567 - 8520695
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  || ||| |||||||| ||||||||||||||||||||||||| || ||||||||  ||||| | ||||||||       ||||||||||    
T  8520567 tgtgtttggtaacataaaaaagctagcatatagcttgttagactagcttataagctagttttgatagaatgagatgtgtttggtaaaaatcttttctcac 8520666  T
Q  256 tagcttatagcgttttttaagaagctaat 284  Q
    ||||||||||| ||||||||||| |||||    
T  8520667 tagcttatagcattttttaagaaactaat 8520695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 155 - 261
Target Start/End: Original strand, 1923946 - 1924052
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| |||||||||||||||||||| ||||||||||||| |||| |||||| |||||| ||||||||||       |||||||||    
T  1923946 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgctttgataaaatgagacgtgtttggtaaaaagcttttctca 1924045  T
Q  255 ctagctt 261  Q
    |||||||    
T  1924046 ctagctt 1924052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 168 - 289
Target Start/End: Complemental strand, 20768955 - 20768834
Alignment:
Q  168 cacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcg 267  Q
    |||||| ||| ||| |||||| ||||| ||||| ||||||| ||||||||||| |||||| | ||||||||       ||||||| ||||||||||| ||    
T  20768955 cacaaaaaagttagtttatagtttgttggactatcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttcttactagcttataacg 20768856  T
Q  268 ttttttaagaagctaattcaag 289  Q
    ||||||||||||||||| ||||    
T  20768855 ttttttaagaagctaatccaag 20768834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 172 - 289
Target Start/End: Original strand, 15524378 - 15524497
Alignment:
Q  172 aataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttgg--nnnnnnncttttctcactagcttatagcgtt 269  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||  ||| | | ||||||||         ||||| |||||||||||||| |||    
T  15524378 aataagctagcttatagcttgttagactagcttataaccttgttttgatataataagatgtgtttggtaaaaaaaacttttttcactagcttatagagtt 15524477  T
Q  270 ttttaagaagctaattcaag 289  Q
    |||| |||||||| ||||||    
T  15524478 ttttgagaagctatttcaag 15524497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 289
Target Start/End: Complemental strand, 7948495 - 7948404
Alignment:
Q  198 ctagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||| ||||||||||| |||||| | ||||||||       ||||||||| ||||||||||||||||||||||||||||| ||||    
T  7948495 ctagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcattagcttatagcgttttttaagaagctaatccaag 7948404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 3033335 - 3033383
Alignment:
Q  172 aataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3033335 aataagctagcttatagcttgttagactagcttataagcttgttttgat 3033383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 11575613 - 11575704
Alignment:
Q  147 cactaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttgg 238  Q
    |||||||  ||||||||||  |||||| |||||||||||||||||||| |||||||||||||  ||||||||||  ||||| | ||||||||    
T  11575613 cactaaggttgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagtttgttttgatagaatgagatgtgtttgg 11575704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 273
Target Start/End: Complemental strand, 4559580 - 4559462
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  || ||| |||||||||||||||||||| ||| ||||||||| ||||| |||||  ||||| | ||||||||       ||||| |||    
T  4559580 ctgtgtttggtaacataaaaaagctagcttatagcttgttggacaagcttataagcttgtcttgatagaatgagatgtgtttggtaaaaaacttttttca 4559481  T
Q  255 ctagcttatagcgtttttt 273  Q
     ||||||||||||||||||    
T  4559480 ttagcttatagcgtttttt 4559462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 8520496 - 8520561
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    |||||||||||  ||| ||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  8520496 ctgtgtttggtaacacgaataagctaacttatagcttgttggactagcttataagcttgttttgat 8520561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 7157606 - 7157538
Alignment:
Q  147 cactaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    |||| ||||||||||||||  |||||| |||||||||||||||||||| ||||| ||||||| ||||||    
T  7157606 cacttagactgtgtttggtaacacaaaaaagctagcttatagcttgttggactaacttataagcttgtt 7157538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 17645305 - 17645439
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatg-aaatgaaacgtgtttggnnnnnnncttttctc 253  Q
    |||||||||||  || ||||||||||||||||||||||||||| |||||||| || ||  || |||| ||| |  ||||||||||       ||||||||    
T  17645305 ctgtgtttggtaacataaataagctagcttatagcttgttagattagcttat-aagttcgttggatgaaaacgtgacgtgtttggtaacaagcttttctc 17645403  T
Q  254 actagcttatagcgttttttaagaagctaattcaag 289  Q
    |  |||||||| |||||||| |||||||||||||||    
T  17645404 atgagcttataacgttttttgagaagctaattcaag 17645439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 3033393 - 3033457
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    ||||||||||  || ||| |||||||||||||||||||| ||||||||||||| || ||||||||    
T  3033393 tgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagctagttttgat 3033457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 42709303 - 42709363
Alignment:
Q  148 actaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||| |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  42709303 actaaggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 42709363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 24171359 - 24171498
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaat-gaaacgtgtttggnnnnnnnctt 248  Q
    |||| |||||||||||  |||||| |||||||||||||||||||| || |||||||||| || | || |||||||| |  ||||||||||       |||    
T  24171359 taaggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctcg-ttagatgaaatcgtgacgtgtttggtaacaagctt 24171457  T
Q  249 ttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    || |||  ||||||||||||||||| | |||||| ||||||    
T  24171458 ttttcatgagcttatagcgttttttgaaaagctatttcaag 24171498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 36944339 - 36944280
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    ||||||||||  || ||| |||||||||||||||||||||||||| ||||||| ||||||    
T  36944339 tgtgtttggtaacataaaaaagctagcttatagcttgttagactaacttataagcttgtt 36944280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 5050202 - 5050149
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  || |||||||||||||||||||||||| || ||||||||||    
T  5050202 ctgtgtttggtaacataaataagctagcttatagcttgttggattagcttataa 5050149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 6789714 - 6789661
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  6789714 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 6789661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 15498644 - 15498697
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  15498644 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 15498697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 156 - 289
Target Start/End: Original strand, 25881507 - 25881640
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatg-aaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    ||||||||||  || ||||| ||||||||||||||||||||| |||||||||| || | || |||| ||| |  ||||||||||       |||||||||    
T  25881507 tgtgtttggtaacataaataggctagcttatagcttgttagattagcttataagctcg-ttggatgaaaacgtgacgtgtttggtaacaaacttttctca 25881605  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
      ||||||||||||||||| |||| ||| ||||||    
T  25881606 tgagcttatagcgttttttgagaaactatttcaag 25881640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 29525421 - 29525368
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  29525421 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 29525368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 34590026 - 34589973
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  34590026 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 34589973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 37530845 - 37530792
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  37530845 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 37530792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 41734369 - 41734316
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  41734369 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 41734316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 11784296 - 11784240
Alignment:
Q  152 agactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||||||  || ||| |||||||||||||||||||| || ||||||||||    
T  11784296 agactgtgtttggtaacataaaaaagctagcttatagcttgttggattagcttataa 11784240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 2891073 - 2891014
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    ||||||||||  ||||||||| ||||||||||| ||||| ||||| ||||||| ||||||    
T  2891073 tgtgtttggtaacacaaataatctagcttatagtttgttggactaacttataagcttgtt 2891014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 10815056 - 10815115
Alignment:
Q  149 ctaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||| |||||||||||  |||||| |||||||||||||| ||||| || ||||||||||    
T  10815056 ctaaggctgtgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataa 10815115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 36959466 - 36959525
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    ||||||||||  |||||| ||||||||||||||||||||| ||||| ||| || ||||||    
T  36959466 tgtgtttggtaacacaaaaaagctagcttatagcttgttaaactagtttacaagcttgtt 36959525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 247 - 289
Target Start/End: Complemental strand, 5102019 - 5101977
Alignment:
Q  247 ttttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||||||||| | |||||| ||||||    
T  5102019 ttttctcactagcttatagcgttttttgaaaagctatttcaag 5101977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 16218405 - 16218355
Alignment:
Q  158 tgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  16218405 tgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 16218355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 12280780 - 12280833
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||| ||||| || ||||||||||    
T  12280780 ctgtgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataa 12280833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 27813107 - 27813062
Alignment:
Q  149 ctaagactgtgtttggtgccacaaataagctagcttatagcttgtt 194  Q
    ||||| |||||||||||  |||||| ||||||||||||||||||||    
T  27813107 ctaaggctgtgtttggtaacacaaaaaagctagcttatagcttgtt 27813062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 5102802 - 5102750
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||  ||| ||||||||||| ||||| ||||| |||||||||||||    
T  5102802 tgtgtttggtaacacgaataagctagcgtatagattgttggactagcttataa 5102750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 13359581 - 13359521
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtt 215  Q
    ||||||||| |  |||||| |||||||| ||||||||||| || |||||||||| ||||||    
T  13359581 ctgtgtttgataacacaaaaaagctagcatatagcttgttggattagcttataagcttgtt 13359521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 36761062 - 36761114
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||  |||||| |||||||||||||| ||||| || ||||||||||    
T  36761062 tgtgtttggtaacacaaaaaagctagcttataggttgttggattagcttataa 36761114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 41356314 - 41356354
Alignment:
Q  249 ttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    |||| |||| ||||||||||||||||||||| |||||||||    
T  41356314 ttcttactaacttatagcgttttttaagaagttaattcaag 41356354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 2e-32; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 157 - 289
Target Start/End: Complemental strand, 18109813 - 18109681
Alignment:
Q  157 gtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcact 256  Q
    |||||||||  |||||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||       |||||||||||    
T  18109813 gtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcact 18109714  T
Q  257 agcttatagcgttttttaagaagctaattcaag 289  Q
     ||||||||||||||||||||||||||| ||||    
T  18109713 cgcttatagcgttttttaagaagctaatccaag 18109681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 40862303 - 40862170
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| ||||||| |||||||||||| ||||||||||||| ||||||||||| |||||| | ||||||||       |||||||||    
T  40862303 ctgtgtttggtaacacaaa-aagctagtttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctca 40862205  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||||||||||||| ||||    
T  40862204 ctagcttatagcgttttttaagaagctaatccaag 40862170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 26340139 - 26340000
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttt 249  Q
    |||| |||||||||||  |||||| |||||| |||||| |||||| ||||||||||||| ||||||||||| |||||| |  |||||||       ||||    
T  26340139 taaggctgtgtttggtaacacaaaaaagctaacttataacttgttggactagcttataagcttgttttgataaaatgagatatgtttggtaaaaagcttt 26340040  T
Q  250 tctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  26340039 tctcactagcttatagcgttttttaagaagctaatccaag 26340000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 1086042 - 1086176
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||| | | ||||||||       |||||| ||    
T  1086042 ctgtgtttggtaacacaaataagctagcttatagcttgttaaactaacttataagcttgttttgataaaataagatgtgtttggtataaaacttttccca 1086141  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||| |||||||| ||||||    
T  1086142 ctagcttatagcgttttttgagaagctatttcaag 1086176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 153 - 289
Target Start/End: Original strand, 33178958 - 33179094
Alignment:
Q  153 gactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttct 252  Q
    |||||||||||||  ||| ||||||||||||||||||||||| ||||||||||||| |||||||||||  ||| | | ||||||||       ||||| |    
T  33178958 gactgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaaaatctttttt 33179057  T
Q  253 cactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  33179058 cactagcttatagcgttttttgagaagctatttcaag 33179094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 157 - 289
Target Start/End: Original strand, 39532063 - 39532195
Alignment:
Q  157 gtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcact 256  Q
    |||||||||  |||||| ||  |||||||||||||||| |||||||||||||  |||||||||| |||||| | ||||||||       |||||||||||    
T  39532063 gtgtttggtaacacaaaaaaattagcttatagcttgttggactagcttataagtttgttttgataaaatgagatgtgtttggtaaaaagcttttctcact 39532162  T
Q  257 agcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||||||||||| ||||    
T  39532163 agcttatagcgttttttaagaagctaatccaag 39532195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 44526087 - 44525953
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  || |||||||||||||| ||||||||| ||| |||||||||||||||||||||  ||||||| ||||||||       ||||| |||    
T  44526087 ctgtgtttggtaacataaataagctagcttttagcttgttggacaagcttataaacttgttttgatagaatgaaatgtgtttggtaaaaagcttttttca 44525988  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
     |||||||||||||||||| |||||||| ||||||    
T  44525987 ttagcttatagcgttttttgagaagctatttcaag 44525953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 156 - 288
Target Start/End: Complemental strand, 38928589 - 38928457
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  || ||| |||||||||||||||||||| ||||||||||||| || ||||||||  ||||| | ||||||||       | |||||||     
T  38928589 tgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagctagttttgatagaatgagatgtgtttggtaaaaagcgtttctcat 38928490  T
Q  256 tagcttatagcgttttttaagaagctaattcaa 288  Q
    |||||||||||||||||||||||||||||||||    
T  38928489 tagcttatagcgttttttaagaagctaattcaa 38928457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 7183382 - 7183248
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| |||||||||||||| ||||| |||||| |||||| ||||||||||| |||| ||| ||||||||       |||||||||    
T  7183382 ctgtgtttggtaacacaaaaaagctagcttatagtttgttggactagtttataagcttgttttgataaaataaaatgtgtttggtaaaaagcttttctca 7183283  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    ||  |||||| ||||||||||||||||||| ||||    
T  7183282 ctgacttataacgttttttaagaagctaatccaag 7183248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 6322239 - 6322106
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  ||| ||||||||||||||||||||||| |||||||||| ||||||||||||||  ||| | | ||||||||       ||||| ||||    
T  6322239 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttagaaacttgttttgatataataagatgtgtttggtaaaaaacttttttcac 6322140  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||| |||| |||||||| ||||||    
T  6322139 tagcttatagcgtgttttgagaagctatttcaag 6322106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 8341255 - 8341121
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||||||||||||||||| |||||| ||||||||||||| |||  ||||||  ||||| | ||||||||       |||||||||    
T  8341255 ctgtgtttggtaacacaaataagctagcttataacttgttggactagcttataagcttactttgatagaatgagatgtgtttggcaaaaagcttttctca 8341156  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||| ||| |||||||||| |||| ||||    
T  8341155 ctagcttataacgtattttaagaagttaatccaag 8341121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 10247482 - 10247351
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  |||||| ||| |||||||||| ||||| ||||||||||||| ||||||||||| |||||  | ||||||||       |||||||| |    
T  10247482 tgtgtttggtaacacaaaaaagttagcttatagtttgttggactagcttataagcttgttttgataaaatg--atgtgtttggtaaaaagcttttctcgc 10247385  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||| ||||||||||| ||||    
T  10247384 tagcttatagcgtttttgaagaagctaatccaag 10247351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 156 - 289
Target Start/End: Original strand, 14452300 - 14452433
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcac 255  Q
    ||||||||||  ||| ||| ||||||||||||||||||| ||||||||||||| |||||||||||  ||| | | ||||||||       ||||| ||||    
T  14452300 tgtgtttggtaacacgaattagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaaaagcttttgtcac 14452399  T
Q  256 tagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||| |||||| ||||| || ||||||    
T  14452400 tagcttatagcatttttttagaagttatttcaag 14452433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 28125091 - 28124977
Alignment:
Q  170 caaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcgtt 269  Q
    ||||||||||||||||||||||||| |||||||||||||  ||||||| ||  ||||  | ||||||||       ||||| ||||||||||||| ||||    
T  28125091 caaataagctagcttatagcttgttggactagcttataagtttgttttaatagaatgtcatgtgtttggtaaaaaacttttttcactagcttataacgtt 28124992  T
Q  270 ttttaagaagctaat 284  Q
    |||||| ||||||||    
T  28124991 ttttaataagctaat 28124977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 159 - 289
Target Start/End: Complemental strand, 32482341 - 32482211
Alignment:
Q  159 gtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactag 258  Q
    |||||||  |||||| ||||||| |||||| ||| | ||||||||||||| ||| |||| || |||||| ||||||||||       |||||||||||||    
T  32482341 gtttggtaacacaaaaaagctagtttatagtttgctggactagcttataagcttatttttataaaatgagacgtgtttggtaaaaagcttttctcactag 32482242  T
Q  259 cttatagcgttttttaagaagctaattcaag 289  Q
     ||||| | ||||||||||||||||| ||||    
T  32482241 tttataacattttttaagaagctaatccaag 32482211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 168 - 284
Target Start/End: Original strand, 11447252 - 11447368
Alignment:
Q  168 cacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcg 267  Q
    ||||||||||||||||||||||||| | ||||||||||||| |||||||||||  |||   | |||||| |       ||||| |||||| |||||||||    
T  11447252 cacaaataagctagcttatagcttgctggactagcttataaccttgttttgatagaatacgatgtgtttagtaaaaagcttttttcactaacttatagcg 11447351  T
Q  268 ttttttaagaagctaat 284  Q
    |||||||||||| ||||    
T  11447352 ttttttaagaagttaat 11447368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 36600936 - 36601019
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttgg 238  Q
    ||||||||| |  ||| ||||||||||||||||||||||| ||||||||||||| |||||||||||  ||| ||| ||||||||    
T  36600936 ctgtgtttgataacacgaataagctagcttatagcttgttggactagcttataagcttgttttgatataataaaatgtgtttgg 36601019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 169 - 289
Target Start/End: Original strand, 37240962 - 37241082
Alignment:
Q  169 acaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcactagcttatagcgt 268  Q
    ||||||||||||||||||| ||||||||||||||||||||  ||||||||||  ||| | | |||||||        |||||  ||||||||||||||||    
T  37240962 acaaataagctagcttataacttgttagactagcttataagtttgttttgatagaataagatgtgtttgctaaaaagctttttccactagcttatagcgt 37241061  T
Q  269 tttttaagaagctaattcaag 289  Q
    ||||| | |||||| ||||||    
T  37241062 tttttgaaaagctatttcaag 37241082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 45376901 - 45376961
Alignment:
Q  148 actaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||| |||||||||||  |||||||||||||| |||||||||||| |||||||||||||    
T  45376901 actaaggctgtgtttggtaacacaaataagctagtttatagcttgttggactagcttataa 45376961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 7454520 - 7454477
Alignment:
Q  246 cttttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  7454520 cttttctcactagcttatagcgttttttaagaagctaatccaag 7454477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 6432169 - 6432222
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||| ||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  6432169 ctgtatttggtaacacaaataagctagcttatagcttgttggactagcttataa 6432222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 10361392 - 10361445
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| |||||||||||||    
T  10361392 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataa 10361445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 11018140 - 11018079
Alignment:
Q  147 cactaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||| |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  11018140 cactaaggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 11018079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 6319553 - 6319601
Alignment:
Q  172 aataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||||||    
T  6319553 aataagctagcttacagcttgttggactagcttataagcttgttttgat 6319601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 15265438 - 15265358
Alignment:
Q  158 tgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttgg 238  Q
    ||||||||  |||||||||| ||||||||||||| || | ||||||||||| |||||||| ||  ||||| ||||||||||    
T  15265438 tgtttggtaacacaaataagttagcttatagcttcttgggctagcttataagcttgttttaatagaatgagacgtgtttgg 15265358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 33182668 - 33182604
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgat 220  Q
    ||||||||||  ||| ||||||||||||||||||| ||  ||||||||||||| |||||||||||    
T  33182668 tgtgtttggtaacacgaataagctagcttatagctcgtaggactagcttataagcttgttttgat 33182604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 39241264 - 39241208
Alignment:
Q  152 agactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  39241264 agactgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 39241208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 30523603 - 30523661
Alignment:
Q  150 taagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||| |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  30523603 taaggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 30523661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 36602832 - 36602770
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgtttt 217  Q
    |||||||||||  ||  ||||||||||||||||||||||| |||||||| |||| ||||||||    
T  36602832 ctgtgtttggtaacattaataagctagcttatagcttgttggactagctgataagcttgtttt 36602770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 148 - 289
Target Start/End: Original strand, 3147439 - 3147580
Alignment:
Q  148 actaagactgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatg-aaatgaaacgtgtttggnnnnnnnc 246  Q
    |||||| |||||||||||  || ||||||| ||||||||| ||||||||| |||||||||| |||  || |||| |||||  ||||||||||            
T  3147439 actaaggctgtgtttggtaacataaataagttagcttataacttgttagattagcttataagctt-cttggatgaaaatgtgacgtgtttggtaacaagt 3147537  T
Q  247 ttttctcactagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||  ||||||||| ||||||| | |||||||||||||    
T  3147538 ttttctcatgagcttatagtgttttttgaaaagctaattcaag 3147580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 12161014 - 12160961
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  12161014 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 12160961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 24520318 - 24520265
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  ||| ||||||||||||||||||||||| || ||||||||||    
T  24520318 ctgtgtttggtaacacgaataagctagcttatagcttgttggattagcttataa 24520265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 38928647 - 38928603
Alignment:
Q  172 aataagctagcttatagcttgttagactagcttataaacttgttt 216  Q
    ||||||||||||||||| ||||| ||||||||||||| |||||||    
T  38928647 aataagctagcttatagtttgttggactagcttataagcttgttt 38928603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 289
Target Start/End: Original strand, 27679093 - 27679128
Alignment:
Q  254 actagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||||||||||||||| |||||||||||||    
T  27679093 actagcttatagcgttttttaataagctaattcaag 27679128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 1876133 - 1876080
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||| ||||| || ||||||||||    
T  1876133 ctgtgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataa 1876080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 34245245 - 34245298
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  || ||| |||||||||||||||||||| || ||||||||||    
T  34245245 ctgtgtttggtaacataaaaaagctagcttatagcttgttggattagcttataa 34245298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 42098012 - 42097959
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| ||||||||||||||||| || || ||||||||||    
T  42098012 ctgtgtttggtaacacaaaaaagctagcttatagcttcttggattagcttataa 42097959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 16496715 - 16496663
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||  |||||| |||||||||||||||||||| || ||| ||||||    
T  16496715 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagtttataa 16496663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 42519714 - 42519766
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||  |||||| ||||||||||||||||||||  | ||||||||||    
T  42519714 tgtgtttggtaacacaaaaaagctagcttatagcttgttgcattagcttataa 42519766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 43496162 - 43496214
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    ||||||||||  || ||||||||||||||||||||||||  | ||||||||||    
T  43496162 tgtgtttggtaacataaataagctagcttatagcttgttgcattagcttataa 43496214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 66; Significance: 7e-29; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 4148 - 4282
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| |||||||||||||||||||| ||||||||||||| |||||||| || |||||| | ||||||||       |||||||||    
T  4148 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttaataaaatgagatgtgtttggtaaaaagcttttctca 4247  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||| |||||||||||||| |||| ||||    
T  4248 ctagcttataacgttttttaagaagttaatccaag 4282  T

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Target: scaffold0115; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 11888 - 12022
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  |||||| |||||||||||||||||||| ||||||||||||| |||||||| || |||||| | ||||||||       |||||||||    
T  11888 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttaataaaatgagatgtgtttggtaaaaagcttttctca 11987  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    |||||||||| |||||||||||||| |||| ||||    
T  11988 ctagcttataacgttttttaagaagttaatccaag 12022  T

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Target: scaffold0009 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 158 - 289
Target Start/End: Complemental strand, 94501 - 94370
Alignment:
Q  158 tgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctcacta 257  Q
    ||||||||  ||| |||||||||||||||||||||||  ||||||||||||||||||||||||  ||| | | ||||||||       ||||| ||||||    
T  94501 tgtttggtaacacgaataagctagcttatagcttgttgaactagcttataaacttgttttgatataataagatgtgtttggtaaaaagcttttttcacta 94402  T
Q  258 gcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||| |||||| |||||||| ||||||    
T  94401 gcttatagcattttttgagaagctatttcaag 94370  T

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Target: scaffold0039 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 76243 - 76377
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatgaaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    |||||||||||  || ||| ||| |||||||||| ||||| |||||||||||||| ||||||||||  ||||| | ||||||||       |||||||||    
T  76243 ctgtgtttggtaacataaaaaaggtagcttatagtttgttggactagcttataaatttgttttgatagaatgagatgtgtttggtgaaaaacttttctca 76342  T
Q  255 ctagcttatagcgttttttaagaagctaattcaag 289  Q
    ||||||||||||||||||| | |||||||| ||||    
T  76343 ctagcttatagcgttttttgaaaagctaatccaag 76377  T

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Target: scaffold0007 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 288
Target Start/End: Complemental strand, 157714 - 157582
Alignment:
Q  156 tgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataaacttgttttgatg-aaatgaaacgtgtttggnnnnnnncttttctca 254  Q
    ||||||||||  || |||||||||||||||||| |||||||| |||||||||| || | || |||| |||||  ||||||||||       |||||||||    
T  157714 tgtgtttggtaacataaataagctagcttatagtttgttagattagcttataagctcg-ttggatgaaaatgtgacgtgtttggtaaaaagcttttctca 157616  T
Q  255 ctagcttatagcgttttttaagaagctaattcaa 288  Q
      || ||||| |||||||| ||||||||||||||    
T  157615 tgagtttataacgttttttgagaagctaattcaa 157582  T

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Target: scaffold0060 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 57949 - 57896
Alignment:
Q  155 ctgtgtttggtgccacaaataagctagcttatagcttgttagactagcttataa 208  Q
    |||||||||||  |||||| |||||||||||||||||||| || ||||||||||    
T  57949 ctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataa 57896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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