View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18485_low_1 (Length: 746)

Name: NF18485_low_1
Description: NF18485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18485_low_1
NF18485_low_1
[»] chr7 (32 HSPs)
chr7 (343-636)||(21906357-21906656)
chr7 (71-345)||(21906689-21906973)
chr7 (654-728)||(43938164-43938237)
chr7 (654-728)||(12931008-12931081)
chr7 (657-728)||(43937935-43938005)
chr7 (654-728)||(37563395-37563468)
chr7 (654-728)||(37563624-37563697)
chr7 (657-728)||(26825671-26825741)
chr7 (654-728)||(12929524-12929597)
chr7 (658-728)||(34454754-34454823)
chr7 (666-728)||(20947234-20947295)
chr7 (658-728)||(26825904-26825973)
chr7 (660-728)||(34454525-34454592)
chr7 (654-728)||(12928078-12928150)
chr7 (654-725)||(12930816-12930886)
chr7 (654-728)||(5636295-5636368)
chr7 (654-725)||(12929331-12929401)
chr7 (658-728)||(12928313-12928382)
chr7 (654-728)||(27558122-27558195)
chr7 (220-334)||(45429256-45429370)
chr7 (654-715)||(23191124-23191184)
chr7 (660-728)||(35262667-35262734)
chr7 (657-728)||(47081888-47081958)
chr7 (654-728)||(5280313-5280386)
chr7 (666-728)||(5280553-5280614)
chr7 (654-728)||(47121548-47121621)
chr7 (668-728)||(44545879-44545938)
chr7 (654-728)||(7159199-7159271)
chr7 (666-728)||(5636067-5636127)
chr7 (658-728)||(15827762-15827831)
chr7 (14-44)||(21906975-21907005)
chr7 (666-712)||(47082129-47082174)
[»] chr5 (37 HSPs)
chr5 (17-142)||(29784943-29785068)
chr5 (654-728)||(32052494-32052567)
chr5 (654-728)||(33735583-33735656)
chr5 (654-728)||(14745489-14745562)
chr5 (654-728)||(14745583-14745656)
chr5 (654-728)||(25253127-25253200)
chr5 (654-728)||(25253356-25253429)
chr5 (654-728)||(25316917-25316990)
chr5 (654-728)||(25317147-25317220)
chr5 (654-728)||(37945035-37945108)
chr5 (654-728)||(13064679-13064752)
chr5 (654-728)||(32052265-32052338)
chr5 (660-728)||(37945270-37945337)
chr5 (654-728)||(6421663-6421736)
chr5 (654-728)||(6421892-6421965)
chr5 (654-728)||(12991058-12991131)
chr5 (658-725)||(33735357-33735423)
chr5 (654-728)||(7015549-7015622)
chr5 (666-728)||(7015791-7015852)
chr5 (658-728)||(18013653-18013722)
chr5 (660-728)||(27753519-27753586)
chr5 (466-542)||(29784851-29784927)
chr5 (654-728)||(20704983-20705055)
chr5 (657-728)||(22533431-22533501)
chr5 (654-728)||(8323326-8323399)
chr5 (666-728)||(21260906-21260967)
chr5 (666-728)||(27753761-27753822)
chr5 (654-728)||(41339395-41339468)
chr5 (666-728)||(22024152-22024213)
chr5 (574-636)||(29784762-29784824)
chr5 (658-727)||(18013886-18013953)
chr5 (658-726)||(18934988-18935055)
chr5 (654-725)||(14744716-14744786)
chr5 (219-306)||(32892009-32892096)
chr5 (654-725)||(39402134-39402204)
chr5 (661-727)||(147383-147448)
chr5 (666-728)||(22533672-22533733)
[»] chr6 (33 HSPs)
chr6 (654-728)||(13480478-13480551)
chr6 (654-728)||(13480249-13480322)
chr6 (654-728)||(737967-738040)
chr6 (654-728)||(5064605-5064678)
chr6 (654-728)||(23291785-23291858)
chr6 (654-728)||(5064376-5064449)
chr6 (654-728)||(15819760-15819833)
chr6 (658-728)||(20994965-20995034)
chr6 (654-728)||(22494150-22494223)
chr6 (654-728)||(32337605-32337678)
chr6 (660-728)||(30234868-30234935)
chr6 (654-728)||(20561197-20561270)
chr6 (658-728)||(21880405-21880474)
chr6 (654-728)||(21880634-21880707)
chr6 (654-728)||(23292014-23292087)
chr6 (654-728)||(32337837-32337910)
chr6 (654-728)||(22493922-22493994)
chr6 (654-728)||(20560969-20561042)
chr6 (654-728)||(26503624-26503697)
chr6 (660-728)||(9607592-9607659)
chr6 (657-728)||(20994860-20994929)
chr6 (666-728)||(3299841-3299902)
chr6 (654-728)||(3299600-3299673)
chr6 (657-728)||(7612822-7612892)
chr6 (689-728)||(16704613-16704652)
chr6 (258-340)||(2428031-2428112)
chr6 (694-728)||(15819609-15819643)
chr6 (657-726)||(20774354-20774422)
chr6 (689-728)||(16706955-16706994)
chr6 (689-728)||(26542657-26542696)
chr6 (654-725)||(26542890-26542960)
chr6 (666-728)||(1066421-1066482)
chr6 (258-319)||(24766035-24766096)
[»] scaffold1493 (2 HSPs)
scaffold1493 (654-728)||(863-936)
scaffold1493 (658-725)||(637-703)
[»] chr8 (44 HSPs)
chr8 (654-728)||(25287833-25287906)
chr8 (654-728)||(547705-547778)
chr8 (658-728)||(26739991-26740061)
chr8 (654-728)||(27857012-27857085)
chr8 (654-728)||(40525548-40525621)
chr8 (654-724)||(11478415-11478484)
chr8 (654-728)||(23424782-23424855)
chr8 (654-728)||(36623393-36623466)
chr8 (654-728)||(40525777-40525850)
chr8 (654-728)||(41182166-41182239)
chr8 (654-728)||(43866981-43867054)
chr8 (654-727)||(547472-547544)
chr8 (660-728)||(41801857-41801924)
chr8 (657-728)||(7666-7736)
chr8 (657-724)||(27856787-27856853)
chr8 (654-733)||(29190196-29190274)
chr8 (657-728)||(41251164-41251234)
chr8 (654-728)||(11478186-11478259)
chr8 (654-728)||(20096061-20096134)
chr8 (654-728)||(36623623-36623696)
chr8 (654-728)||(37342823-37342896)
chr8 (654-728)||(37343052-37343125)
chr8 (654-728)||(40422201-40422274)
chr8 (654-728)||(43866752-43866825)
chr8 (657-728)||(31690169-31690239)
chr8 (654-716)||(29190429-29190490)
chr8 (660-728)||(38619839-38619906)
chr8 (657-728)||(7434-7504)
chr8 (654-728)||(20096291-20096367)
chr8 (657-728)||(22763869-22763939)
chr8 (654-728)||(23424553-23424626)
chr8 (654-728)||(26739758-26739831)
chr8 (666-728)||(40422442-40422503)
chr8 (657-728)||(41251399-41251469)
chr8 (666-728)||(22763636-22763697)
chr8 (666-727)||(15716158-15716218)
chr8 (657-728)||(35163538-35163608)
chr8 (666-728)||(9632369-9632430)
chr8 (213-339)||(10172406-10172532)
chr8 (654-728)||(41802086-41802159)
chr8 (658-725)||(25288066-25288132)
chr8 (694-728)||(9632612-9632646)
chr8 (666-728)||(31689936-31689997)
chr8 (654-724)||(38600220-38600289)
[»] chr4 (40 HSPs)
chr4 (654-728)||(12691447-12691520)
chr4 (654-728)||(20086478-20086551)
chr4 (654-728)||(53559657-53559730)
chr4 (654-728)||(12691675-12691748)
chr4 (654-728)||(13872339-13872412)
chr4 (654-728)||(22249774-22249847)
chr4 (654-728)||(33294413-33294486)
chr4 (654-728)||(47981906-47981979)
chr4 (654-727)||(19916698-19916770)
chr4 (660-728)||(54961472-54961539)
chr4 (654-728)||(47862193-47862266)
chr4 (654-728)||(47862422-47862495)
chr4 (655-728)||(8287204-8287276)
chr4 (657-728)||(34238511-34238581)
chr4 (654-728)||(13872110-13872183)
chr4 (654-728)||(22250003-22250076)
chr4 (654-728)||(26601346-26601419)
chr4 (654-728)||(47980726-47980799)
chr4 (654-716)||(53559440-53559501)
chr4 (666-727)||(37678130-37678190)
chr4 (657-728)||(33294185-33294255)
chr4 (657-728)||(37677889-37677959)
chr4 (657-728)||(48507690-48507760)
chr4 (654-728)||(54961701-54961774)
chr4 (219-335)||(31052981-31053097)
chr4 (661-728)||(50245898-50245964)
chr4 (666-728)||(50246140-50246201)
chr4 (666-728)||(35730943-35731004)
chr4 (656-734)||(52339230-52339307)
chr4 (666-726)||(489466-489525)
chr4 (666-726)||(515258-515317)
chr4 (689-728)||(27813357-27813396)
chr4 (654-725)||(53475875-53475945)
chr4 (666-728)||(8286973-8287034)
chr4 (666-728)||(32846403-32846464)
chr4 (654-688)||(35730728-35730762)
chr4 (258-332)||(37538113-37538187)
chr4 (699-728)||(19740901-19740930)
chr4 (666-727)||(19916938-19916998)
chr4 (694-735)||(45199161-45199202)
[»] chr3 (29 HSPs)
chr3 (654-728)||(1741428-1741501)
chr3 (657-728)||(10998146-10998216)
chr3 (654-728)||(40256915-40256988)
chr3 (654-728)||(10749359-10749432)
chr3 (654-728)||(11312776-11312849)
chr3 (654-728)||(22129047-22129120)
chr3 (654-728)||(30804118-30804191)
chr3 (654-728)||(55036939-55037012)
chr3 (654-716)||(10749589-10749650)
chr3 (657-727)||(10749669-10749738)
chr3 (654-728)||(22129279-22129352)
chr3 (654-728)||(33458188-33458261)
chr3 (654-728)||(40257143-40257216)
chr3 (654-728)||(53037297-53037370)
chr3 (654-728)||(55036710-55036783)
chr3 (654-728)||(11313005-11313077)
chr3 (654-728)||(33989289-33989362)
chr3 (654-728)||(51279272-51279345)
chr3 (660-728)||(53037068-53037135)
chr3 (654-728)||(21300403-21300476)
chr3 (219-341)||(35970436-35970558)
chr3 (654-728)||(10997918-10997988)
chr3 (654-728)||(24576565-24576638)
chr3 (654-728)||(30890477-30890550)
chr3 (666-728)||(33989055-33989116)
chr3 (654-728)||(46670289-46670362)
chr3 (661-728)||(35432627-35432693)
chr3 (666-728)||(30803887-30803948)
chr3 (286-335)||(26848415-26848464)
[»] chr2 (39 HSPs)
chr2 (654-728)||(16367004-16367077)
chr2 (657-728)||(20911171-20911241)
chr2 (654-728)||(1149978-1150051)
chr2 (654-728)||(16367233-16367306)
chr2 (654-728)||(1150207-1150280)
chr2 (654-728)||(19606958-19607031)
chr2 (654-728)||(32519425-32519498)
chr2 (654-728)||(45663778-45663851)
chr2 (654-726)||(8089723-8089791)
chr2 (654-728)||(8089493-8089566)
chr2 (654-727)||(17366892-17366964)
chr2 (668-728)||(10446873-10446932)
chr2 (654-728)||(17580369-17580442)
chr2 (658-728)||(32519196-32519265)
chr2 (654-727)||(4375821-4375893)
chr2 (654-727)||(9693784-9693856)
chr2 (655-728)||(22731803-22731875)
chr2 (657-728)||(20911403-20911472)
chr2 (661-728)||(41846433-41846499)
chr2 (654-728)||(18476948-18477021)
chr2 (654-728)||(28599697-28599770)
chr2 (657-728)||(22309472-22309542)
chr2 (666-728)||(9959107-9959168)
chr2 (666-728)||(41846674-41846735)
chr2 (666-728)||(9694024-9694085)
chr2 (666-728)||(22309713-22309774)
chr2 (666-728)||(28599468-28599529)
chr2 (220-345)||(1465743-1465868)
chr2 (258-299)||(15756263-15756304)
chr2 (660-724)||(5608637-5608700)
chr2 (668-728)||(17366667-17366726)
chr2 (657-728)||(9958866-9958936)
chr2 (657-728)||(11830233-11830303)
chr2 (661-724)||(19620786-19620848)
chr2 (661-728)||(43681897-43681963)
chr2 (696-726)||(10446929-10446959)
chr2 (654-725)||(17580598-17580664)
chr2 (191-244)||(1465838-1465891)
chr2 (660-725)||(37985003-37985067)
[»] scaffold0206 (1 HSPs)
scaffold0206 (654-728)||(10366-10439)
[»] scaffold0201 (2 HSPs)
scaffold0201 (654-728)||(14163-14236)
scaffold0201 (654-728)||(13934-14007)
[»] chr1 (53 HSPs)
chr1 (654-728)||(1040339-1040412)
chr1 (654-728)||(1047245-1047318)
chr1 (654-728)||(1047474-1047547)
chr1 (654-728)||(2953734-2953807)
chr1 (654-728)||(26953142-26953215)
chr1 (654-724)||(33347461-33347530)
chr1 (654-728)||(33347686-33347759)
chr1 (654-728)||(49002917-49002990)
chr1 (654-728)||(739260-739333)
chr1 (654-728)||(5183547-5183620)
chr1 (654-728)||(5183776-5183849)
chr1 (654-728)||(19755675-19755748)
chr1 (654-728)||(25414885-25414958)
chr1 (654-728)||(29043025-29043098)
chr1 (654-728)||(37152808-37152881)
chr1 (654-728)||(46849928-46850001)
chr1 (654-727)||(12577282-12577354)
chr1 (657-728)||(2953505-2953575)
chr1 (657-728)||(5926560-5926630)
chr1 (654-728)||(29980680-29980753)
chr1 (654-728)||(29980908-29980981)
chr1 (654-728)||(49003145-49003218)
chr1 (657-728)||(46364615-46364685)
chr1 (654-728)||(5926791-5926864)
chr1 (654-728)||(24701311-24701384)
chr1 (654-728)||(26953371-26953444)
chr1 (654-728)||(37152579-37152652)
chr1 (654-727)||(48380953-48381025)
chr1 (660-728)||(37152474-37152541)
chr1 (657-720)||(8890260-8890322)
chr1 (657-728)||(49990069-49990139)
chr1 (654-728)||(739488-739561)
chr1 (654-728)||(6056417-6056490)
chr1 (654-728)||(25415114-25415187)
chr1 (658-728)||(33030609-33030678)
chr1 (654-728)||(46364845-46364918)
chr1 (657-728)||(6056651-6056722)
chr1 (661-728)||(12577051-12577117)
chr1 (657-728)||(46849699-46849769)
chr1 (654-725)||(49989839-49989909)
chr1 (666-728)||(24701551-24701612)
chr1 (666-728)||(33030375-33030436)
chr1 (657-725)||(29042799-29042866)
chr1 (689-728)||(48380722-48380761)
chr1 (666-728)||(10019655-10019716)
chr1 (666-724)||(46545013-46545070)
chr1 (261-335)||(48252413-48252487)
chr1 (689-728)||(30830171-30830210)
chr1 (220-306)||(35120131-35120217)
chr1 (662-728)||(35312015-35312080)
chr1 (213-306)||(51587373-51587464)
chr1 (660-713)||(6334712-6334764)
chr1 (666-727)||(52455037-52455097)
[»] scaffold0321 (2 HSPs)
scaffold0321 (654-728)||(10932-11005)
scaffold0321 (654-728)||(10703-10776)
[»] scaffold0233 (1 HSPs)
scaffold0233 (666-728)||(8474-8535)
[»] scaffold0279 (1 HSPs)
scaffold0279 (654-728)||(10894-10967)
[»] scaffold0202 (2 HSPs)
scaffold0202 (660-728)||(14510-14577)
scaffold0202 (666-728)||(14276-14337)
[»] scaffold0022 (1 HSPs)
scaffold0022 (657-727)||(120473-120540)


Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-135; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 343 - 636
Target Start/End: Complemental strand, 21906656 - 21906357
Alignment:
Q  343 taccaaaatataattgtaagataaatgtaaccacttaattgagtattatcttcagacacgttcatgtaaaaagttgtacactatcatcacatcacaatat 442  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21906656 taccaaaatagaattgtaagataaatgtaaccacttaattgagtattatcttcatacacgttcatgtaaaaagttgtacactatcatcacatcacaatat 21906557  T
Q  443 tcaatcaatcatatatttggcgtggttatggtaaaagacaaatgattttaattattcaacaattataattgattgacgatgtaaaaactatttagacaaa 542  Q
    |||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21906556 tcaatcaatcatatatttggtgtggttatggtaaaagtgaaatgattttaattattcaacaattataattgattgacgatgtaaaaactatttagacaaa 21906457  T
Q  543 caaaggacatgaatttaaatatttaatccacttatgtgtgaggtttgattttaaggaggaagatgaag------atgatgaaaaagaagtgataggattt 636  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||      ||||||||||||||||||||||||||    
T  21906456 caatggacatgaatttaaatatttaatccacttatgtgtgaggtttgatttcaaggaggaggatgaagatgaagatgatgaaaaagaagtgataggattt 21906357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 71 - 345
Target Start/End: Complemental strand, 21906973 - 21906689
Alignment:
Q  71 ttctagcatatgttgcatatatcttcttccatttgaaaactcatcgaaaaatatttgatgcacaagaggttattactaattatgtaatttcaca------ 164  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  21906973 ttctagcatacgttgcatatatcttcttccatttgaaaactcatcgaaaaatatttgatgcacaagaggttattactaattatgtaatttcacatttgag 21906874  T
Q  165 ----attgtatattgatgtataccaaaggatttaattagtatcctatatcattgtacgattatcttacacatgcatccaatgatactttgctatgttaat 260  Q
        |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||| |||||| |||    
T  21906873 cacaattgtatattgatgtataccaaaggatttaattagtatactctatcattgtacgattatcttacacatgcatctaatgatactttactatgtcaat 21906774  T
Q  261 taatgaatatgaaaacacataagttatcatattaattaattgatgtatcatcacatcatagaatgcatgtgtaaagtaatcgtac 345  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21906773 taatgaatatgaaaacacataagttgtcatattaattaattgatgtatcatcacatcatagaatgtatgtgtaaagtaatcgtac 21906689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 43938164 - 43938237
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  43938164 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggacgaaaattc 43938237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 12931008 - 12931081
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||    
T  12931008 taggaccaaaagtcaaatgattaatatttgcatggg-cagattggaaggattagtaacttcagggacgaaaattc 12931081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 657 - 728
Target Start/End: Complemental strand, 43938005 - 43937935
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||    
T  43938005 gaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggatgaaaattc 43937935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 37563468 - 37563395
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  37563468 taggaccaaaagtcaaatgattaatatttgca-ggggcagattagaaggattagtaaattcagggacgaaaattc 37563395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 37563624 - 37563697
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||| |||||||||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  37563624 taggaccaaaagtcaaaagattaatatttgca-ggggcaaattggaaggattagtaacttcagggacgaaaattc 37563697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 657 - 728
Target Start/End: Complemental strand, 26825741 - 26825671
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||| |||| | |||||||||||||| |||||||||||||||||||||||||||    
T  26825741 gaccaaaagtcaaatgattaatctttgca-ggggcagattggaatgattagtaacttcagggacgaaaattc 26825671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 12929524 - 12929597
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||| |||||||||||||||||| |||||||||||| ||||||    
T  12929524 taggaccaaaagtcaaatgattaatatttgcacggg-cagattggaaggattagtcacttcagggacggaaattc 12929597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 658 - 728
Target Start/End: Original strand, 34454754 - 34454823
Alignment:
Q  658 accaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||||    
T  34454754 accaaaagtcaaatgattaatatttgca-ggggcagattgaaagaattagtaacttcagggacgaaaattc 34454823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 666 - 728
Target Start/End: Complemental strand, 20947295 - 20947234
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||    
T  20947295 tcaaatgattaatatttgta-gtggcagattggaaggattagtaacttcatggacgaaaattc 20947234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 658 - 728
Target Start/End: Original strand, 26825904 - 26825973
Alignment:
Q  658 accaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||| | ||||||||||| |||||||| |||||||| ||||||||||||    
T  26825904 accaaaagtcaaatgattaatatttgca-ggggcagattgaaaggattaataacttcatggacgaaaattc 26825973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 660 - 728
Target Start/End: Complemental strand, 34454592 - 34454525
Alignment:
Q  660 caaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||| | |||| ||||||||||||||||||||||||  |||||||||||    
T  34454592 caaaagtcaaatgattaatatttgca-ggggtagattggaaggattagtaacttcaaagacgaaaattc 34454525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 12928150 - 12928078
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||| |||||||||||||||| || | ||  ||||||||||||||||||||||| ||||||||||||||    
T  12928150 taggaccaaatgtcaaatgattaatatatgcatgg--cagattggaaggattagtaactttagggacgaaaattc 12928078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 654 - 725
Target Start/End: Complemental strand, 12930886 - 12930816
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaa 725  Q
    ||||||||||||||||||||||||||||||  ||||||| | ||||||||||||||| |||||||| |||||    
T  12930886 taggaccaaaagtcaaatgattaatatttg-caggggcaaaatggaaggattagtaagttcagggatgaaaa 12930816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 5636295 - 5636368
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||| ||||||| |||||  |||| | | ||||||||||||||||||||||||||||||||||||||||    
T  5636295 taggaccaaatgtcaaataattaaattttgca-gtggcagattggaaggattagtaacttcagggacgaaaattc 5636368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 654 - 725
Target Start/End: Complemental strand, 12929401 - 12929331
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaa 725  Q
    ||||||||||||||||||||||||||||||  ||||||| | ||| ||||||||||| |||||||| |||||    
T  12929401 taggaccaaaagtcaaatgattaatatttg-caggggcaaaatgggaggattagtaagttcagggatgaaaa 12929331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 658 - 728
Target Start/End: Original strand, 12928313 - 12928382
Alignment:
Q  658 accaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| ||||||| | | ||||||||  ||||||||||||||||| ||||||||||||    
T  12928313 accaaaagtcaaatgattgatatttgca-gcggcagattaaaaggattagtaacttcaaggacgaaaattc 12928382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 27558122 - 27558195
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||| |||||||||||||||||||||||| ||  |||| | |||||||||||||||||||  ||||||||||||    
T  27558122 taggatcaaaagtcaaatgattaatatttgcaa-tggcaaaatggaaggattagtaacttcgtggacgaaaattc 27558195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 334
Target Start/End: Complemental strand, 45429370 - 45429256
Alignment:
Q  220 ttatcttacacatgcatccaatgatactttgctatgttaattaatgaatatgaaaacacataagttatcatattaattaattgatgtatcatcacatcat 319  Q
    |||| ||||||||||||| ||||||   |||| |||| |||||||||||||||||| | || || | ||| ||| ||||||||| ||| || ||||||||    
T  45429370 ttattttacacatgcatcaaatgatttgttgccatgtcaattaatgaatatgaaaataaatgagatgtcacattcattaattgacgtagcaacacatcat 45429271  T
Q  320 agaatgcatgtgtaa 334  Q
     | ||||||||||||    
T  45429270 tggatgcatgtgtaa 45429256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 654 - 715
Target Start/End: Original strand, 23191124 - 23191184
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttca 715  Q
    ||||||||||||||||||||||||||||||  || ||||||||||||| |||||||| ||||    
T  23191124 taggaccaaaagtcaaatgattaatatttg-cagtggcagattggaagaattagtaaattca 23191184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 728
Target Start/End: Complemental strand, 35262734 - 35262667
Alignment:
Q  660 caaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||  |||| | | |||||||||||||||||||||||||||| ||| |||||||    
T  35262734 caaaagtcaaatgattaaattttgca-gtggcagattggaaggattagtaacttcagagacaaaaattc 35262667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 657 - 728
Target Start/End: Complemental strand, 47081958 - 47081888
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||| |||||||||||||||||  || || ||||||| |||||||||||||||||| || ||||||||    
T  47081958 gaccaaaaatcaaatgattaatatttacaatgg-cagattgaaaggattagtaacttcagagatgaaaattc 47081888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 5280386 - 5280313
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||| ||| |||||| ||||||||||  | | ||||||||||||||||||||||||||||  ||||||||||    
T  5280386 taggaccgaaattcaaattattaatatttaca-gtggcagattggaaggattagtaacttcagtaacgaaaattc 5280313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 728
Target Start/End: Original strand, 5280553 - 5280614
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| || |  ||||||  ||||||||||||||||||||||||||||||    
T  5280553 tcaaatgattaatatttgcaatga-cagattcaaaggattagtaacttcagggacgaaaattc 5280614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 47121548 - 47121621
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||  |||| | | || |||||| ||| |||||||||||||| |||||||||||    
T  47121548 taggaccaaaagtcaaatgattaaattttgca-gtggtagattgaaagtattagtaacttcagagacgaaaattc 47121621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 668 - 728
Target Start/End: Original strand, 44545879 - 44545938
Alignment:
Q  668 aaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||| || ||  | |||| ||||||||||||||||||||||||||||||    
T  44545879 aaatgattaatatttgcaatggtaaaattg-aaggattagtaacttcagggacgaaaattc 44545938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 7159199 - 7159271
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||| |||| |||||||||||||||||| |  ||| | | ||| |||||||||||||||||| ||||||||||    
T  7159199 taggacgaaaattcaaatgattaatatttgca--gggtaaaatgggaggattagtaacttcaggaacgaaaattc 7159271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 666 - 728
Target Start/End: Complemental strand, 5636127 - 5636067
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| ||  |||| | |||||||||||||||||| ||||||||||||||    
T  5636127 tcaaatgattaatatttgcaa-tggca-aatggaaggattagtaactttagggacgaaaattc 5636067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 658 - 728
Target Start/End: Complemental strand, 15827831 - 15827762
Alignment:
Q  658 accaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||| ||||||||||  || ||||||||| |||||||| ||||||||   ||||||||||    
T  15827831 accaaaagtcaaatggttaatatttg-cagtggcagattgaaaggattaataacttcaaaaacgaaaattc 15827762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 21907005 - 21906975
Alignment:
Q  14 attattctatggccaattttactcttcaatt 44  Q
    |||||||||||||||||||||||||||||||    
T  21907005 attattctatggccaattttactcttcaatt 21906975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 666 - 712
Target Start/End: Original strand, 47082129 - 47082174
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaact 712  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||    
T  47082129 tcaaatgattaatatttgt-agtggcagattgaaaggattagtaact 47082174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 3e-50; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 29785068 - 29784943
Alignment:
Q  17 attctatggccaattttactcttcaattgtcaagagcaagcagtgttgtcatgcttctagcatatgttgcatatatcttcttccatttgaaaactcatcg 116  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  29785068 attctattgccaattctactcttcaattgtcaagagctagcagtgttgttatgcttctagcatatgtttcatatatcttcttccaattgaaaactcatcg 29784969  T
Q  117 aaaaatatttgatgcacaagaggtta 142  Q
    ||||||||||||||||||||||||||    
T  29784968 aaaaatatttgatgcacaagaggtta 29784943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 32052494 - 32052567
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  32052494 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggacgaaaattc 32052567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 33735583 - 33735656
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  33735583 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggacgaaaattc 33735656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 14745562 - 14745489
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||    
T  14745562 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggatgaaaattc 14745489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 14745583 - 14745656
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||    
T  14745583 taggaccaaaagtcaaatgattaatatttgcaaggg-cagattggaaggattagtaacttcagcgacgaaaattc 14745656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 25253200 - 25253127
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  25253200 taggaccaaaagtcaaatgattaatatttgca-ggggcaaattggaaggattagtaacttcagggacgaaaattc 25253127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 25253356 - 25253429
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  25253356 taggaccaaaagtcaaatgattagtatttgcaaggg-cagattggaaggattagtaacttcagggacgaaaattc 25253429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 25316990 - 25316917
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  25316990 taggaccaaaagtcaaatgattaatatttgca-ggggcaaattggaaggattagtaacttcagggacgaaaattc 25316917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 25317147 - 25317220
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  25317147 taggaccaaaagtcaaatgattagtatttgcaaggg-cagattggaaggattagtaacttcagggacgaaaattc 25317220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 37945108 - 37945035
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  37945108 taggaccaaaagtcaaatgattaatatttgca-ggggcaaattggaaggattagtaacttcagggacgaaaattc 37945035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 13064679 - 13064752
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| || |||||||||||    
T  13064679 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaactttagagacgaaaattc 13064752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 32052338 - 32052265
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||| |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||    
T  32052338 taggatcaaaagtcaaatgattaatatttgca-ggggcggattggaaggattagtaacttcagggacgaaaattc 32052265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 660 - 728
Target Start/End: Original strand, 37945270 - 37945337
Alignment:
Q  660 caaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||    
T  37945270 caaaagtcaaatgattaatatttgcaaggg-cagattgaaaggattagtaacttcagggacgaaaattc 37945337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 6421736 - 6421663
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||| |||| |||||||    
T  6421736 taggaccaaaagtcaaatgattaatatttgt-aggggcagattgaaaagattagtaacttcaaggacaaaaattc 6421663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 6421892 - 6421965
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||| |||| |||||||||||| |||||||||||||||||    
T  6421892 taggaccaaaagtcaaatgattaatatttgca-ggggcatattgaaaggattagtaatttcagggacgaaaattc 6421965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 12991058 - 12991131
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||| |||||||||||||||||||||||| | |||| ||||||||||||||||||||||||| |||||||||||    
T  12991058 taggatcaaaagtcaaatgattaatatttgca-ggggtagattggaaggattagtaacttcagagacgaaaattc 12991131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 658 - 725
Target Start/End: Complemental strand, 33735423 - 33735357
Alignment:
Q  658 accaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaa 725  Q
    |||||||||||||||||||||||||| | ||| |||||||||||||||||||| ||||||||||||||    
T  33735423 accaaaagtcaaatgattaatatttgca-gggacagattggaaggattagtaatttcagggacgaaaa 33735357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 7015622 - 7015549
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||||||  || |||||||||||| |||||||||||||| ||| ||||||||    
T  7015622 taggaccaaaagtcaaatgattaatatttg-cagtggcagattggaatgattagtaacttcatggatgaaaattc 7015549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 666 - 728
Target Start/End: Original strand, 7015791 - 7015852
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||    
T  7015791 tcaaatgattaatatttgca-gtggcagattggaaggattagtaacttcagggacgaaaattc 7015852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 658 - 728
Target Start/End: Complemental strand, 18013722 - 18013653
Alignment:
Q  658 accaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||  |||||||||||    
T  18013722 accaaaagtcaaatgattaatatttgca-ggggcatattggaaggattagtaacttcactgacgaaaattc 18013653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 660 - 728
Target Start/End: Complemental strand, 27753586 - 27753519
Alignment:
Q  660 caaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||| | | ||||| ||||||||||||||||||||| ||||||||||||    
T  27753586 caaaagtcaaatgattaatatttgca-gtggcagtttggaaggattagtaacttcatggacgaaaattc 27753519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 466 - 542
Target Start/End: Complemental strand, 29784927 - 29784851
Alignment:
Q  466 ggttatggtaaaagacaaatgattttaattattcaacaattataattgattgacgatgtaaaaactatttagacaaa 542  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||| ||| |||||| ||||||||| |||||| |||||    
T  29784927 ggttatggtaacagacaaatgtttttaattatttaacaattatgattaattgacaatgtaaaaattatttatacaaa 29784851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 20704983 - 20705055
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| |  |||||||||| || ||||||||||||||  |||||||||||    
T  20704983 taggaccaaaagtcaaatgattaatatttgca--gggcagattgaaaagattagtaacttcaaagacgaaaattc 20705055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 657 - 728
Target Start/End: Complemental strand, 22533501 - 22533431
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||| ||||||||||  |||||| | |||||||||||| ||||| |||||||||||||||||||||    
T  22533501 gaccaaaagttaaatgattaaattttgta-gtggcagattggaatgattaataacttcagggacgaaaattc 22533431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 8323326 - 8323399
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| ||  |||| | || ||| ||||||||||||| ||||||||||||    
T  8323326 taggaccaaaagtcaaatgattaatatttgcaa-tggcaaaatgaaagaattagtaacttcaaggacgaaaattc 8323399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 728
Target Start/End: Complemental strand, 21260967 - 21260906
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| || || || | |||||||||||||||||||||||||||||||||    
T  21260967 tcaaatgattaatatttgcaatgg-caaaatggaaggattagtaacttcagggacgaaaattc 21260906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 728
Target Start/End: Original strand, 27753761 - 27753822
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||||||  ||||||||||    
T  27753761 tcaaatgattaatatttgca-gtggcagattggaaggattagtaacttcagaaacgaaaattc 27753822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 41339468 - 41339395
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||| ||  |||| | | |||||||||||| |||||| ||||||||||||||||||||    
T  41339468 taggaccaaaagtcaaatgataaaattttgca-gtggcagattggaaagattagcaacttcagggacgaaaattc 41339395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 728
Target Start/End: Original strand, 22024152 - 22024213
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| | | |||| |||||||||||||||||||| || |||||||||||    
T  22024152 tcaaatgattaatatttgca-gtggcaaattggaaggattagtaacttaagtgacgaaaattc 22024213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 574 - 636
Target Start/End: Complemental strand, 29784824 - 29784762
Alignment:
Q  574 ttatgtgtgaggtttgattttaaggaggaagatgaagatgatgaaaaagaagtgataggattt 636  Q
    |||||| || ||||||||||| |||  || ||||||||||||||||||| |||||||||||||    
T  29784824 ttatgtatggggtttgattttcaggtagatgatgaagatgatgaaaaagcagtgataggattt 29784762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 727
Target Start/End: Original strand, 18013886 - 18013953
Alignment:
Q  658 accaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaatt 727  Q
    |||||||||||||| |||||||||||  || ||||||||| ||||||| ||||||||| |||||||||||    
T  18013886 accaaaagtcaaataattaatatttg-cagaggcagattgaaaggattggtaacttca-ggacgaaaatt 18013953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 658 - 726
Target Start/End: Original strand, 18934988 - 18935055
Alignment:
Q  658 accaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaat 726  Q
    ||||||||||||||||||||  |||| | | |||| ||| ||||||||||||| |||||||||||||||    
T  18934988 accaaaagtcaaatgattaaattttgca-gtggcaaattagaaggattagtaatttcagggacgaaaat 18935055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 725
Target Start/End: Original strand, 14744716 - 14744786
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaa 725  Q
    |||||| |||| ||||||||||||||||||  ||||||| | ||| ||||||||||| |||||||| |||||    
T  14744716 taggacgaaaattcaaatgattaatatttg-caggggcaaaatgggaggattagtaagttcagggatgaaaa 14744786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 306
Target Start/End: Original strand, 32892009 - 32892096
Alignment:
Q  219 attatcttacacatgcatccaatgatactttgctatgttaattaatgaatatgaaaacacataagttatcatattaattaattgatgt 306  Q
    ||||| ||||||||||||||||| ||   |||   | ||||||||||||||||||||||||| |||| || |||| ||| ||||||||    
T  32892009 attattttacacatgcatccaataatttattgtcgtattaattaatgaatatgaaaacacatgagttgtcgtattcattgattgatgt 32892096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 725
Target Start/End: Original strand, 39402134 - 39402204
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaa 725  Q
    ||||||||||| ||||||||||||||||||  ||||||| | ||| ||||||||||| | |||||| |||||    
T  39402134 taggaccaaaactcaaatgattaatatttg-caggggcaaaatgggaggattagtaagtccagggatgaaaa 39402204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 661 - 727
Target Start/End: Original strand, 147383 - 147448
Alignment:
Q  661 aaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaatt 727  Q
    |||| ||||||||||||||||| | | ||| ||||||||| ||||||||| ||||||||| ||||||    
T  147383 aaaaatcaaatgattaatattt-ttatgggtagattggaatgattagtaatttcagggacaaaaatt 147448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 666 - 728
Target Start/End: Original strand, 22533672 - 22533733
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| || ||  | |||| |||||||||||||||| |||||||||||||    
T  22533672 tcaaatgattaatatttgcaatggcaacattg-aaggattagtaacttcggggacgaaaattc 22533733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 13480478 - 13480551
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13480478 taggaccaaaagtcaaatgattaatatttgta-ggggcagattggaaggattagtaacttcagggacgaaaattc 13480551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 13480322 - 13480249
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  13480322 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggacgaaaattc 13480249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 737967 - 738040
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  737967 taggaccaaaagtcaaatgattaatacttg-aaggggcagattggaaggattagtaacttcatggacgaaaattc 738040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 5064605 - 5064678
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||    
T  5064605 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacctcagggacgaaaattc 5064678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 23291858 - 23291785
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||    
T  23291858 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggatgaaaattc 23291785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 5064449 - 5064376
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||||||||    
T  5064449 taggaccaaaagtcaaatgattaatatttgca-ggggcaaattgggaggattagtaacttcagggacgaaaattc 5064376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 15819760 - 15819833
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||| |||||| |||||  |||||||||||||||||||||||||||||||||||||    
T  15819760 taggaccaaaagtcaaatgattagtatttgcaagggt-agattggaaggattagtaacttcagggacgaaaattc 15819833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 658 - 728
Target Start/End: Original strand, 20994965 - 20995034
Alignment:
Q  658 accaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||    
T  20994965 accaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggatgaaaattc 20995034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 22494150 - 22494223
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| ||||||||||||    
T  22494150 taggaccaaaagtcaaatgattgatatttgca-ggggcagattggaaggattagtaacttcaaggacgaaaattc 22494223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 32337678 - 32337605
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  32337678 taggcccaaaagtcaaatgattaatatttgca-ggggcatattggaaggattagtaacttcagggacgaaaattc 32337605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 660 - 728
Target Start/End: Original strand, 30234868 - 30234935
Alignment:
Q  660 caaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||    
T  30234868 caaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggatgaaaattc 30234935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 20561197 - 20561270
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||| |||| ||| ||||||||||||    
T  20561197 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattaataacatcaaggacgaaaattc 20561270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 658 - 728
Target Start/End: Complemental strand, 21880474 - 21880405
Alignment:
Q  658 accaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||| |||||||||||    
T  21880474 accaaaagtcaaatgattaatatttgca-ggggcagattgaaaggattagtaacttcagagacgaaaattc 21880405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 21880634 - 21880707
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||| |||||||||| | |||  |||||||||||||||||||||||||||||||||||||    
T  21880634 taggaccaaaagtcaaatgcttaatatttgca-gggatagattggaaggattagtaacttcagggacgaaaattc 21880707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 23292014 - 23292087
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||| |||||||||||||||||||||||| | |||  |||||||||||||||||||||||||||||||||||||    
T  23292014 taggatcaaaagtcaaatgattaatatttgca-gggatagattggaaggattagtaacttcagggacgaaaattc 23292087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 32337837 - 32337910
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||| ||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||    
T  32337837 taggacgaaaagtcaaatgattaatatttgca-ggggcatattggaaggatcagtaacttcagggacgaaaattc 32337910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 22493994 - 22493922
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| |  ||| |||||| || |||||||||||||||||||||||||||    
T  22493994 taggaccaaaagtcaaatgattaatatttgca--gggtagattgaaaagattagtaacttcagggacgaaaattc 22493922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 20561042 - 20560969
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||||||  |||||||||||| || ||||| ||||| |||||||||||||||    
T  20561042 taggaccaaaagtcaaatgattaatatttg-caggggcagattgaaatgattaataactacagggacgaaaattc 20560969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 26503624 - 26503697
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||||||  || ||| |||||||||||||| |||||||| ||||||||||||    
T  26503624 taggaccaaaagtcaaatgattaatatttg-cagtggcggattggaaggattaataacttcatggacgaaaattc 26503697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 660 - 728
Target Start/End: Original strand, 9607592 - 9607659
Alignment:
Q  660 caaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||| | |||||| ||| |||||||||||||||||| ||||||||||||    
T  9607592 caaaagtcaaatgattaatatttgca-ggggcatattagaaggattagtaacttcatggacgaaaattc 9607659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 657 - 728
Target Start/End: Complemental strand, 20994929 - 20994860
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||| |||||||||||||||| |  ||||||||| ||||||||||||||||||| |||||||||||    
T  20994929 gaccaaaagttaaatgattaatatttgca--gggcagattagaaggattagtaacttcagagacgaaaattc 20994860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 666 - 728
Target Start/End: Original strand, 3299841 - 3299902
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| || || ||||||||||||||||||||||||| ||||||||||||    
T  3299841 tcaaatgattaatatttgcaatgg-cagattggaaggattagtaacttcaaggacgaaaattc 3299902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 3299673 - 3299600
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||| ||||||| |||||||||||||||| || || || ||||||| |||||||||||||| ||||||||||||    
T  3299673 taggatcaaaagtgaaatgattaatatttgcaatgg-caaattggaatgattagtaacttcatggacgaaaattc 3299600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 657 - 728
Target Start/End: Original strand, 7612822 - 7612892
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||  |||| | | |||||||||||| |||| |||| |||||||||||||||||    
T  7612822 gaccaaaagtcaaatgattaaattttgca-gtggcagattggaaagattggtaatttcagggacgaaaattc 7612892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 689 - 728
Target Start/End: Original strand, 16704613 - 16704652
Alignment:
Q  689 ggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  16704613 ggcagattggaaggattagtaacttcaaggacgaaaattc 16704652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 258 - 340
Target Start/End: Complemental strand, 2428112 - 2428031
Alignment:
Q  258 aattaatgaatatgaaaacacataagttatcatattaattaattgatgtatcatcacatcatagaatgcatgtgtaaagtaat 340  Q
    ||||||||||||||||||||| ||| || ||||||| ||||||||||||   | |||||||||  ||||||||||||| ||||    
T  2428112 aattaatgaatatgaaaacacttaa-ttgtcatattcattaattgatgtgataacacatcataagatgcatgtgtaaaataat 2428031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 694 - 728
Target Start/End: Complemental strand, 15819643 - 15819609
Alignment:
Q  694 attggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||||||||    
T  15819643 attggaaggattagtaacttcagggacgaaaattc 15819609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 657 - 726
Target Start/End: Original strand, 20774354 - 20774422
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaat 726  Q
    |||||||||||||||||||||  |||| | | ||||||||| ||| |||||||||||||| |||||||||    
T  20774354 gaccaaaagtcaaatgattaaattttgca-gtggcagattgaaagaattagtaacttcagagacgaaaat 20774422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 689 - 728
Target Start/End: Original strand, 16706955 - 16706994
Alignment:
Q  689 ggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||| |||||||||||||| ||||||||||||    
T  16706955 ggcagattggaatgattagtaacttcaaggacgaaaattc 16706994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 689 - 728
Target Start/End: Complemental strand, 26542696 - 26542657
Alignment:
Q  689 ggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  26542696 ggcagattgaaatgattagtaacttcagggacgaaaattc 26542657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 725
Target Start/End: Original strand, 26542890 - 26542960
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaa 725  Q
    ||||||||||||||||||||||||||||||   | ||| ||||| ||  |||||||||||||| ||||||||    
T  26542890 taggaccaaaagtcaaatgattaatatttg-cggtggccgattgaaattattagtaacttcagagacgaaaa 26542960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 666 - 728
Target Start/End: Original strand, 1066421 - 1066482
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| || || || | |||||  ||||||||||||||||||||||||||    
T  1066421 tcaaatgattaatatttgcaatgg-caaaatggaaatattagtaacttcagggacgaaaattc 1066482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 24766096 - 24766035
Alignment:
Q  258 aattaatgaatatgaaaacacataagttatcatattaattaattgatgtatcatcacatcat 319  Q
    ||||||| |||||||||||||||  ||| ||||||| ||||||||||||  || ||||||||    
T  24766096 aattaataaatatgaaaacacatgcgttgtcatattcattaattgatgtggcaacacatcat 24766035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 63; Significance: 5e-27; HSPs: 2)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 863 - 936
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  863 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggacgaaaattc 936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 725
Target Start/End: Complemental strand, 703 - 637
Alignment:
Q  658 accaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaa 725  Q
    ||||||||||||||||||||||||||  ||||||| | ||  ||||||||||| |||||||| |||||    
T  703 accaaaagtcaaatgattaatatttg-caggggcaaaatgagaggattagtaagttcagggatgaaaa 637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 5e-27; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 25287906 - 25287833
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  25287906 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggacgaaaattc 25287833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 547705 - 547778
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||    
T  547705 taggaccaaaagtcaaatgattaatatttgta-gtggcagattggaaggattagtaactttagggacgaaaattc 547778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 658 - 728
Target Start/End: Original strand, 26739991 - 26740061
Alignment:
Q  658 accaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||    
T  26739991 accaaaagtcaaatgattaatatttgtagggggcagattgcaaggattagtaacttcatggacgaaaattc 26740061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 27857012 - 27857085
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||    
T  27857012 taggaccaaaagtcaaatgattaatatttgcaaggg-cagattggaatgattagtaacttcagggacgaaaattc 27857085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 40525621 - 40525548
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||    
T  40525621 taggaccaaaagtcaaatgattaatatttgca-gtggcagattggaaggattagtaacttcagggacgaaaattc 40525548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 724
Target Start/End: Original strand, 11478415 - 11478484
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaa 724  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  11478415 taggaccaaaaatcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggacgaaa 11478484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 23424782 - 23424855
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||    
T  23424782 taggaccaaaaatcaaatgattaatatttgca-ggggcagattggaatgattagtaacttcagggacgaaaattc 23424855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 36623466 - 36623393
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||||||    
T  36623466 taggaccaaaagtcaaatgattaatatttgca-ggagcagattgaaaggattagtaacttcagggacgaaaattc 36623393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 40525777 - 40525850
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||||||||||| ||||||||| |||||||||||||||||    
T  40525777 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaatgattagtaatttcagggacgaaaattc 40525850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 41182166 - 41182239
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||| || |||||||||||||||||||||||||||    
T  41182166 taggaccaaaagtcaaatgattaatatttgca-ggggcagattgaaatgattagtaacttcagggacgaaaattc 41182239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 43866981 - 43867054
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||    
T  43866981 taggaccaaaagtcaaatgattaatatttgca-ggggcagattgaaaggattagtaacttcatggacgaaaattc 43867054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 654 - 727
Target Start/End: Complemental strand, 547544 - 547472
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaatt 727  Q
    ||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||    
T  547544 taggaccaaaagtgaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggacaaaaatt 547472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 660 - 728
Target Start/End: Complemental strand, 41801924 - 41801857
Alignment:
Q  660 caaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||    
T  41801924 caaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcaggaacgaaaattc 41801857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 657 - 728
Target Start/End: Original strand, 7666 - 7736
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||| ||||||||||||    
T  7666 gaccaaaagtcaaatgattaatatttgca-ggggcatattggaaggattagtaacttcatggacgaaaattc 7736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 657 - 724
Target Start/End: Complemental strand, 27856853 - 27856787
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaa 724  Q
    ||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||    
T  27856853 gaccaaaagtcaaatgattaatatttgca-ggggcggattggaaggattagtaacttcagggacgaaa 27856787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 654 - 733
Target Start/End: Complemental strand, 29190274 - 29190196
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattctgatg 733  Q
    |||||||||||||||||||||||||||||| | |||  ||||||||||||||||||||||||| ||||||||||| ||||    
T  29190274 taggaccaaaagtcaaatgattaatatttgca-gggatagattggaaggattagtaacttcagagacgaaaattcagatg 29190196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 657 - 728
Target Start/End: Complemental strand, 41251234 - 41251164
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||| |||||||||||    
T  41251234 gaccaaaagtcaaatgattaatatttgta-gggacatattggaaggattagtaacttcagagacgaaaattc 41251164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 11478259 - 11478186
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||| ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||    
T  11478259 tagggccaaaagtcaaatgattaatatttgca-ggggcagattgaaaggattagtaacttcaaggacgaaaattc 11478186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 20096134 - 20096061
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | | |||| ||||||||||||||||||||||||||| |||||||    
T  20096134 taggaccaaaagtcaaatgattaatatttgca-gaggcaaattggaaggattagtaacttcagggacaaaaattc 20096061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 36623623 - 36623696
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||| |||||||| |||||||| |||||||||||||||||    
T  36623623 taggaccaaaagtcaaatgattaatatttgca-ggggcatattggaagaattagtaatttcagggacgaaaattc 36623696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 37342896 - 37342823
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||| ||||||||||    
T  37342896 taggaccaaaagtcaaatgattaatatttgca-ggggcggattgaaaggattagtaacttcaggaacgaaaattc 37342823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 37343052 - 37343125
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||| |||||||| |||||||| |||||||||||||||||    
T  37343052 taggaccaaaagtcaaatgattaatatttgca-ggggcatattggaagaattagtaatttcagggacgaaaattc 37343125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 40422274 - 40422201
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | | |||||||||||||||||||| ||||||| |||||||||||    
T  40422274 taggaccaaaagtcaaatgattaatatttgca-gtggcagattggaaggattagttacttcagagacgaaaattc 40422201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 43866825 - 43866752
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||| |||||||| |||||||| |||||||||||||||||    
T  43866825 taggaccaaaagtcaaatgattaatatttgca-ggggcatattggaagaattagtaatttcagggacgaaaattc 43866752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 657 - 728
Target Start/End: Original strand, 31690169 - 31690239
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||| |||||||||||||||| | | |||||||||||| |||||||||||||||||||||||||||    
T  31690169 gaccaaaagttaaatgattaatatttgca-gtggcagattggaatgattagtaacttcagggacgaaaattc 31690239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 716
Target Start/End: Original strand, 29190429 - 29190490
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcag 716  Q
    |||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  29190429 taggactaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcag 29190490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 660 - 728
Target Start/End: Complemental strand, 38619906 - 38619839
Alignment:
Q  660 caaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||  |||| | | ||||||||||||||||||||||||||||||||||||||||    
T  38619906 caaaagtcaaatgattaaattttgca-gtggcagattggaaggattagtaacttcagggacgaaaattc 38619839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 657 - 728
Target Start/End: Complemental strand, 7504 - 7434
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||| |||| ||  ||||||| ||||||||||||||||| ||||||||    
T  7504 gaccaaaagtcaaatgattaatatttgt-agggacatgttggaagaattagtaacttcagggaagaaaattc 7434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 20096291 - 20096367
Alignment:
Q  654 taggaccaaaagtcaaatgatta---atatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||| |||||||||||   |||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  20096291 taggaccaaaattcaaatgattaaatatatttg-catgggcagattggaaggattagtaacttcagggacgaaaattc 20096367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 657 - 728
Target Start/End: Original strand, 22763869 - 22763939
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||  || |  |||||||||||||||||||||||||| |||||||||||    
T  22763869 gaccaaaagtcaaatgattaatatttacaatga-cagattggaaggattagtaacttcagagacgaaaattc 22763939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 23424626 - 23424553
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||| |||||||||||||||||||||||| | |||||||||||  || |||||||||||||||||| |||||||    
T  23424626 taggatcaaaagtcaaatgattaatatttgca-ggggcagattgttagaattagtaacttcagggacaaaaattc 23424553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 26739831 - 26739758
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||| ||||||||||||||||||| | ||| || |||| |||||||||||| |||||||||||||||||    
T  26739831 taggaccaaacgtcaaatgattaatatttgca-gggacatattgaaaggattagtaatttcagggacgaaaattc 26739758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 666 - 728
Target Start/End: Original strand, 40422442 - 40422503
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| | | |||||||| |||||||||||||||||||||||||||||||    
T  40422442 tcaaatgattaatatttgca-gtggcagatttgaaggattagtaacttcagggacgaaaattc 40422503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 657 - 728
Target Start/End: Original strand, 41251399 - 41251469
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||  ||||| |||||| || |||||||||||||| ||||| ||||||    
T  41251399 gaccaaaagtcaaatgattaatatttg-caggggtagattgaaatgattagtaacttcatggacggaaattc 41251469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 728
Target Start/End: Complemental strand, 22763697 - 22763636
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||| | || ||||| ||| |||||||||||||||||||||||||||    
T  22763697 tcaaatgattaatatttgta-gtggtagattagaaagattagtaacttcagggacgaaaattc 22763636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 666 - 727
Target Start/End: Original strand, 15716158 - 15716218
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaatt 727  Q
    ||||||||||||||||||||| || || | | ||||||||||||||||||||||||||||||    
T  15716158 tcaaatgattaatatttgtaatgg-caaaatagaaggattagtaacttcagggacgaaaatt 15716218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 657 - 728
Target Start/End: Complemental strand, 35163608 - 35163538
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||  |||| | | ||||||||| |||||| |||||||||| ||||||||||||    
T  35163608 gaccaaaagtcaaatgattaaattttgca-gtggcagattgaaaggatcagtaacttcaaggacgaaaattc 35163538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 728
Target Start/End: Complemental strand, 9632430 - 9632369
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| || |  || | |||||||||||||||||||||||||||||||||    
T  9632430 tcaaatgattaatatttgcaatga-caaaatggaaggattagtaacttcagggacgaaaattc 9632369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 213 - 339
Target Start/End: Complemental strand, 10172532 - 10172406
Alignment:
Q  213 tgtacgattatcttacacatgcatccaatgatactttgctatgttaattaatgaatatgaaaacacataagttatcatattaattaattgatgtatcatc 312  Q
    ||||| ||||| ||||||||||||| |||||| | |||  | || ||||| ||||||||| ||| |||| ||| ||| ||| ||||||||| ||| || |    
T  10172532 tgtacaattattttacacatgcatcaaatgatgcgttgtcacgtcaattagtgaatatgacaactcatatgttttcacattcattaattgacgtaacaac 10172433  T
Q  313 acatcatagaatgcatgtgtaaagtaa 339  Q
    |||| || | ||| |||||||||||||    
T  10172432 acattatcggatgtatgtgtaaagtaa 10172406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 41802086 - 41802159
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||| |||| |||||||||| |||||||| | |||||| ||||||| |||||||||||||| ||| ||||||||    
T  41802086 taggatcaaatgtcaaatgataaatatttgca-ggggcaaattggaatgattagtaacttcaaggatgaaaattc 41802159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 725
Target Start/End: Original strand, 25288066 - 25288132
Alignment:
Q  658 accaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaa 725  Q
    ||||||||||||||||||||||||||  ||||||| | ||  ||||||||||| |||||||| |||||    
T  25288066 accaaaagtcaaatgattaatatttg-caggggcaaaatgagaggattagtaagttcagggatgaaaa 25288132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 694 - 728
Target Start/End: Original strand, 9632612 - 9632646
Alignment:
Q  694 attggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||| ||||||||||||    
T  9632612 attggaaggattagtaacttcaaggacgaaaattc 9632646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 666 - 728
Target Start/End: Complemental strand, 31689997 - 31689936
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||| ||||| | | |||| |||||||||||| ||||||||| ||||||||||||    
T  31689997 tcaaatgattaacatttgca-gtggcatattggaaggattggtaacttcatggacgaaaattc 31689936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 654 - 724
Target Start/End: Original strand, 38600220 - 38600289
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaa 724  Q
    ||||||||||| ||||||||||||  |||| | | ||| | ||| ||||||||||||||||||||||||||    
T  38600220 taggaccaaaactcaaatgattaaattttgca-gtggctgtttgaaaggattagtaacttcagggacgaaa 38600289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 5e-27; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 12691520 - 12691447
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  12691520 taggaccaaaagtcaaatgattaatatttgta-gggacagattggaaggattagtaacttcagggacgaaaattc 12691447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 20086551 - 20086478
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  20086551 taggactaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggacgaaaattc 20086478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 53559657 - 53559730
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||    
T  53559657 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaacgattagtaacttcagggacgaaaattc 53559730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 12691675 - 12691748
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||| |||||||    
T  12691675 taggaccaaaagtcaaatgattaatatttgca-ggggcggattggaaggattagtaacttcagggacaaaaattc 12691748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 13872339 - 13872412
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| |||||||    
T  13872339 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaagaattagtaacttcagggacaaaaattc 13872412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 22249847 - 22249774
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||    
T  22249847 taggaccaaaagtcaaatgattaatatttgca-ggggcagattgaaaggattagtaacttcatggacgaaaattc 22249774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 33294413 - 33294486
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||| |||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  33294413 taggaccaaaaatcaaatgattaatatttgca-ggggcagatcggaaggattagtaacttcagggacgaaaattc 33294486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 47981906 - 47981979
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||    
T  47981906 taggaccaaaaatcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagagacgaaaattc 47981979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 654 - 727
Target Start/End: Complemental strand, 19916770 - 19916698
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaatt 727  Q
    |||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||| ||||||||    
T  19916770 taggaccaaaagtcaaatgattaatatttgca-gtggcagattggaaggattagtaacttcaggggcgaaaatt 19916698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 660 - 728
Target Start/End: Complemental strand, 54961539 - 54961472
Alignment:
Q  660 caaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  54961539 caaaagtcaaatgattaatatttgca-ggggcatattggaaggattagtaacttcagggacgaaaattc 54961472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 47862266 - 47862193
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||| |||||||||||||||| |||||| | |||||||||||||||||||||||||||||| |||||||||||    
T  47862266 taggacaaaaagtcaaatgattagtatttgca-ggggcagattggaaggattagtaacttcagagacgaaaattc 47862193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 47862422 - 47862495
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||| ||| |||||||||||||||||| ||||||||||||    
T  47862422 taggaccaaaagtcaaatgattaatatttgca-ggggcaaattagaaggattagtaacttcatggacgaaaattc 47862495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 655 - 728
Target Start/End: Original strand, 8287204 - 8287276
Alignment:
Q  655 aggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||  |||| | | ||||||||||||||||||||||||||||||||||||||||    
T  8287204 aggaccaaaagtcaaatgattaaattttgca-gtggcagattggaaggattagtaacttcagggacgaaaattc 8287276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 657 - 728
Target Start/End: Complemental strand, 34238581 - 34238511
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||| | |||||| |||| |||||||||||||||||| |||||||||||    
T  34238581 gaccaaaagtcaaatgattaatatttgca-ggggcatattgaaaggattagtaacttcagagacgaaaattc 34238511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 13872183 - 13872110
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||| |||||| ||||| || ||||||||||||| |||||||| ||||||||||||    
T  13872183 taggaccaaaagtcaaatgattagtatttgcaaggg-catattggaaggattaataacttcatggacgaaaattc 13872110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 22250003 - 22250076
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||| ||||||||||||||||||||||| | |||||| |||||||| |||||||| |||||||||||||||||    
T  22250003 taggactaaaagtcaaatgattaatatttgca-ggggcatattggaagaattagtaatttcagggacgaaaattc 22250076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 26601346 - 26601419
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||||||  | ||||| ||||||| |||||||||||||| ||||||||||||    
T  26601346 taggaccaaaagtcaaatgattaatatttg-catgggcatattggaatgattagtaacttcatggacgaaaattc 26601419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 47980799 - 47980726
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||| |||||||||||||||||||||||| | |||  ||||||||||||| |||||||||||||||||||||||    
T  47980799 taggatcaaaagtcaaatgattaatatttgca-gggatagattggaaggatcagtaacttcagggacgaaaattc 47980726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 716
Target Start/End: Complemental strand, 53559501 - 53559440
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcag 716  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  53559501 taggaccaaaagtcaaatgattaatatttg-caggggcagattggaaggattaataacttcag 53559440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 666 - 727
Target Start/End: Original strand, 37678130 - 37678190
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaatt 727  Q
    |||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||    
T  37678130 tcaaatgattaatatttgca-gtggcagattggaaggattagtaacttcagggacgaaaatt 37678190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 657 - 728
Target Start/End: Complemental strand, 33294255 - 33294185
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||| |||||||||||||||| | |||||| |||||||||||||||||||||| |||| |||||||    
T  33294255 gaccaaaagttaaatgattaatatttgca-ggggcaaattggaaggattagtaacttcatggacaaaaattc 33294185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 657 - 728
Target Start/End: Complemental strand, 37677959 - 37677889
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||  |||| | | ||||||| ||||||||||||||||||||||||||||||||    
T  37677959 gaccaaaagtcaaatgattaaattttgca-gtggcagatcggaaggattagtaacttcagggacgaaaattc 37677889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 657 - 728
Target Start/End: Original strand, 48507690 - 48507760
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||  |||||  | |||||||||||||||||||||||||||| |||||||||||    
T  48507690 gaccaaaagtcaaatgattaaattttgtt-gtggcagattggaaggattagtaacttcagagacgaaaattc 48507760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 54961701 - 54961774
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||| |||||||||||||||||||||||    ||||||||||| |||||||||||||||||||||| |||||||    
T  54961701 taggagcaaaagtcaaatgattaatattt-acgggggcagattgaaaggattagtaacttcagggactaaaattc 54961774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 219 - 335
Target Start/End: Complemental strand, 31053097 - 31052981
Alignment:
Q  219 attatcttacacatgcatccaatgatactttgctatgttaattaatgaatatgaaaacacataagttatcatattaattaattgatgtatcatcacatca 318  Q
    ||||| ||||||||||||||||||||   |||    || ||||||||||||||||||||||  |||| ||||||| |||||| |||||| || |||| ||    
T  31053097 attattttacacatgcatccaatgatgtgttgtcgcgtcaattaatgaatatgaaaacacacgagttgtcatattcattaatcgatgtagcaacacaaca 31052998  T
Q  319 tagaatgcatgtgtaaa 335  Q
    | | |||||||||||||    
T  31052997 ttggatgcatgtgtaaa 31052981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 661 - 728
Target Start/End: Complemental strand, 50245964 - 50245898
Alignment:
Q  661 aaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||| | | |||||||||||| |||||||||||||| ||| ||||||||    
T  50245964 aaaagtcaaatgattaatatttgca-gtggcagattggaatgattagtaacttcatggatgaaaattc 50245898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 728
Target Start/End: Original strand, 50246140 - 50246201
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| | | | ||||||||||||||||||||||||| ||||||||||||    
T  50246140 tcaaatgattaatatttgca-gtgacagattggaaggattagtaacttcatggacgaaaattc 50246201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 728
Target Start/End: Original strand, 35730943 - 35731004
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| || |  || | |||||||||||||||||||||||||||||||||    
T  35730943 tcaaatgattaatatttgcaatga-cataatggaaggattagtaacttcagggacgaaaattc 35731004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 656 - 734
Target Start/End: Complemental strand, 52339307 - 52339230
Alignment:
Q  656 ggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattctgatga 734  Q
    |||||||||||||| |||||||||||||  ||||  |||||| |||||||||||| ||||||||| |||| ||| ||||    
T  52339307 ggaccaaaagtcaagtgattaatatttg-cagggaaagattgaaaggattagtaaattcagggaccaaaactctaatga 52339230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 666 - 726
Target Start/End: Original strand, 489466 - 489525
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaat 726  Q
    |||||||||||||||||| || || || | ||||||||||||||||||| |||||||||||    
T  489466 tcaaatgattaatatttgcaatgg-caaaatggaaggattagtaacttctgggacgaaaat 489525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 666 - 726
Target Start/End: Original strand, 515258 - 515317
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaat 726  Q
    |||||||||||||||||| || || || | ||||||||||||||||||| |||||||||||    
T  515258 tcaaatgattaatatttgcaatgg-caaaatggaaggattagtaacttctgggacgaaaat 515317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 689 - 728
Target Start/End: Original strand, 27813357 - 27813396
Alignment:
Q  689 ggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  27813357 ggcagattggaaggattagtaacttcaggggcggaaattc 27813396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 725
Target Start/End: Complemental strand, 53475945 - 53475875
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaa 725  Q
    |||||| |||| |||||||||||||||||| || |||||  ||| ||||||||||||||| ||||| |||||    
T  53475945 taggactaaaactcaaatgattaatatttgcaa-gggcaatttgaaaggattagtaactttagggatgaaaa 53475875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 666 - 728
Target Start/End: Complemental strand, 8287034 - 8286973
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| || || || | ||||||||||| ||||||||| |||||||||||    
T  8287034 tcaaatgattaatatttgcaatgg-caaaatggaaggattattaacttcagagacgaaaattc 8286973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 666 - 728
Target Start/End: Complemental strand, 32846464 - 32846403
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| || || || | ||||||||||| |||||||||| ||||||||||    
T  32846464 tcaaatgattaatatttgcaatgg-caaaatggaaggattaataacttcaggaacgaaaattc 32846403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 654 - 688
Target Start/End: Complemental strand, 35730762 - 35730728
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaagg 688  Q
    |||||||||||||||||||||||||||||| ||||    
T  35730762 taggaccaaaagtcaaatgattaatatttgcaagg 35730728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 258 - 332
Target Start/End: Original strand, 37538113 - 37538187
Alignment:
Q  258 aattaatgaatatgaaaacacataagttatcatattaattaattgatgtatcatcacatcatagaatgcatgtgt 332  Q
    |||||||||||||||||||| || |||| ||  ||| ||||||||||||  || |||||| | ||||||||||||    
T  37538113 aattaatgaatatgaaaacatatgagttgtcgcattcattaattgatgtcgcaacacatcgttgaatgcatgtgt 37538187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 728
Target Start/End: Complemental strand, 19740930 - 19740901
Alignment:
Q  699 aaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||||||    
T  19740930 aaggattagtaacttcagggacgaaaattc 19740901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 727
Target Start/End: Original strand, 19916938 - 19916998
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaatt 727  Q
    |||||||||||||||||| | | ||||||||| || ||||||||||||||  ||||||||||    
T  19916938 tcaaatgattaatatttgca-gtggcagattgaaatgattagtaacttcaaagacgaaaatt 19916998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 694 - 735
Target Start/End: Complemental strand, 45199202 - 45199161
Alignment:
Q  694 attggaaggattagtaacttcagggacgaaaattctgatgat 735  Q
    |||| |||||||||||||||||| ||||||||||| ||||||    
T  45199202 attgaaaggattagtaacttcagagacgaaaattcagatgat 45199161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 5e-27; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 1741501 - 1741428
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  1741501 taggaccaaaagtcaaatgattaatatttgcaaggg-cagattggaaggattagtaacttcagggacgaaaattc 1741428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 657 - 728
Target Start/End: Original strand, 10998146 - 10998216
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  10998146 gaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggacgaaaattc 10998216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 40256988 - 40256915
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||    
T  40256988 taggaccaaaagtcaaatgattaatatttgcaaggg-catattggaaggattagtaacttcagggacgaaaattc 40256915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 10749432 - 10749359
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||  ||||| |||||||||||||||||||||||||||||||    
T  10749432 taggaccaaaagtcaaatgattaatatttgca-gggatagattagaaggattagtaacttcagggacgaaaattc 10749359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 11312849 - 11312776
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||||| || ||||||| ||||||||||||||||||||||    
T  11312849 taggaccaaaagtcaaatgattaatatttgca-ggggcagactgcaaggattggtaacttcagggacgaaaattc 11312776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 22129120 - 22129047
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||| ||||||||||||||||||||||| | |||||| ||||||||||||||||||||||| |||||||||||    
T  22129120 taggacgaaaagtcaaatgattaatatttgca-ggggcaaattggaaggattagtaacttcagtgacgaaaattc 22129047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 30804118 - 30804191
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | | | ||||||||||||||||||||||||||| ||||||||||    
T  30804118 taggaccaaaagtcaaatgattaatatttgca-gtgacagattggaaggattagtaacttcaggaacgaaaattc 30804191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 55036939 - 55037012
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||| | ||||||||||    
T  55036939 taggaccaaaaatcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcaagaacgaaaattc 55037012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 716
Target Start/End: Original strand, 10749589 - 10749650
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcag 716  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  10749589 taggaccaaaagtcaaatgattaatatttg-ctggggcagattggaaggattagtaacttcag 10749650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 657 - 727
Target Start/End: Original strand, 10749669 - 10749738
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaatt 727  Q
    |||||||||||||||||||||||||||   | |||||||||||| ||||||||||||||||||||||||||    
T  10749669 gaccaaaagtcaaatgattaatatttgct-gaggcagattggaaagattagtaacttcagggacgaaaatt 10749738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 22129279 - 22129352
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| ||||||||||| | | |||| ||| |||||||||||||||||||||||||||||||    
T  22129279 taggaccaaaagtcaaattattaatatttgca-gaggcaaatttgaaggattagtaacttcagggacgaaaattc 22129352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 33458188 - 33458261
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||||||  || | |||||| ||||||||||||||||||||||||| |||||    
T  33458188 taggaccaaaagtcaaatgattaatatttg-cagtgacagattagaaggattagtaacttcagggacgacaattc 33458261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 40257143 - 40257216
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||| |||||||||||||||||||||||| | ||||||||||| || ||||||||| |||||||||||||||||    
T  40257143 taggatcaaaagtcaaatgattaatatttgca-ggggcagattgaaatgattagtaatttcagggacgaaaattc 40257216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 53037297 - 53037370
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||||||  |||||||||||| |||||| |||||||  ||||||||||||||    
T  53037297 taggaccaaaagtcaaatgattaatatttg-caggggcagattgaaaggatcagtaactgtagggacgaaaattc 53037370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 55036783 - 55036710
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||| || |||||||||||||||| | ||||||||||||||||||||||||||||||| | ||||||||    
T  55036783 taggaccaaaggttaaatgattaatatttgca-ggggcagattggaaggattagtaacttcaggaatgaaaattc 55036710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 11313005 - 11313077
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||  |||||||||||    
T  11313005 taggaccaaaagtcaaatgattagtatttg-caggggcagattagaaggattagtaacttca-tgacgaaaattc 11313077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 33989289 - 33989362
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||| ||| || | || ||||||||||||| |||||||| ||||||||||||    
T  33989289 taggaccaaaagtcaaatgattaatatctgt-agtgacaaattggaaggattactaacttcatggacgaaaattc 33989362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 51279345 - 51279272
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||| ||||||||||||||||||||||| | |||||| |||| || ||||||||||||| |||||||||||||    
T  51279345 taggactaaaagtcaaatgattaatatttgca-ggggcaaattgaaatgattagtaacttctgggacgaaaattc 51279272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 660 - 728
Target Start/End: Complemental strand, 53037135 - 53037068
Alignment:
Q  660 caaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||| ||||||||| ||||||||| | |||| | |||||||||||||||||||||||||||||||||||    
T  53037135 caaatgtcaaatgactaatatttgca-ggggtatattggaaggattagtaacttcagggacgaaaattc 53037068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 21300403 - 21300476
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||| ||||||||||||||||||||||||  | ||| |||| || |||||||||||||||||| |||||||||||    
T  21300403 tagggccaaaagtcaaatgattaatatttaca-gggacagactgaaaggattagtaacttcagagacgaaaattc 21300476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 219 - 341
Target Start/End: Complemental strand, 35970558 - 35970436
Alignment:
Q  219 attatcttacacatgcatccaatgatactttgctatgttaattaatgaatatgaaaacacataagttatcatattaattaattgatgtatcatcacatca 318  Q
    ||||| || |||| |||||||||||||  |||  | || ||||||| ||||||||||||||||||   ||||||| ||||||||| ||  || ||||| |    
T  35970558 attattttgcacacgcatccaatgatatgttgtcacgtcaattaataaatatgaaaacacataagccgtcatattcattaattgacgtgacaacacatga 35970459  T
Q  319 tagaatgcatgtgtaaagtaatc 341  Q
    | ||||||||||||||| |||||    
T  35970458 ttgaatgcatgtgtaaaataatc 35970436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 10997988 - 10997918
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||| |||||||||||||||||||||||  | ||     |||||||||||||||||||||||||||||||||||    
T  10997988 taggatcaaaagtcaaatgattaatatttacaggga----attggaaggattagtaacttcagggacgaaaattc 10997918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 24576565 - 24576638
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||| ||||||||||||||||||  |  |||||||||||||||||||||| ||||  || ||||||||    
T  24576565 taggaccaaaattcaaatgattaatatttg-cactggcagattggaaggattagtaatttcaaagatgaaaattc 24576638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 30890477 - 30890550
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||| |||||||||||||||||  |||| | | ||||||||| || |||||||||||||||||| ||||||||    
T  30890477 taggacaaaaagtcaaatgattaaattttgca-gtggcagattgaaaagattagtaacttcagggatgaaaattc 30890550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 728
Target Start/End: Complemental strand, 33989116 - 33989055
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||| ||||||||||| | | ||||||||||||||||||||||||| ||| ||||||||||    
T  33989116 tcaaataattaatatttgca-gtggcagattggaaggattagtaacttaaggtacgaaaattc 33989055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 46670362 - 46670289
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||  |||| | | || ||||||||||||||||||| |||| ||||| ||||||    
T  46670362 taggaccaaaagtcaaatgattaaattttgca-gtggtagattggaaggattagtaaattcaaggacggaaattc 46670289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 661 - 728
Target Start/End: Original strand, 35432627 - 35432693
Alignment:
Q  661 aaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||| ||||||||||| | | |||||||||||||||||| |||||| | | ||||||||||    
T  35432627 aaaagtcaaataattaatatttgca-gtggcagattggaaggattaataactttatgaacgaaaattc 35432693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 666 - 728
Target Start/End: Complemental strand, 30803948 - 30803887
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||| ||||||||||||| | | | ||||||||||| |||||||||||||| |||||||||||    
T  30803948 tcaattgattaatatttgca-gtgacagattggaagaattagtaacttcagagacgaaaattc 30803887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 26848464 - 26848415
Alignment:
Q  286 atcatattaattaattgatgtatcatcacatcatagaatgcatgtgtaaa 335  Q
    |||||||| |||||||||||| ||| |||||||| | |||||||||||||    
T  26848464 atcatattcattaattgatgtttcaacacatcattggatgcatgtgtaaa 26848415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 5e-27; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 16367077 - 16367004
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  16367077 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggacgaaaattc 16367004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 657 - 728
Target Start/End: Complemental strand, 20911241 - 20911171
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  20911241 gaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggacgaaaattc 20911171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 1150051 - 1149978
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||    
T  1150051 taggaccaaaagtcaaatgattaatatttgca-ggggccgattggaaggattagtaacttcagggacgaaaattc 1149978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 16367233 - 16367306
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  16367233 taggaccaaaagtcaaatgattaatatttgca-ggggcatattggaaggattagtaacttcagggacgaaaattc 16367306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 1150207 - 1150280
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||| |||||||||||| |||||||||||||||||    
T  1150207 taggaccaaaagtcaaatgattaatatttgca-ggggcagattgaaaggattagtaatttcagggacgaaaattc 1150280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 19607031 - 19606958
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||||||||||||    
T  19607031 taggaccaaaagtcaaatgattaatatttgcaacga-cagattggaaggattagtaacttcagggacgaaaattc 19606958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 32519425 - 32519498
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||| ||||||||||    
T  32519425 taggaccaaaagtcaaatgattaatatttgca-ggggcagattgaaaggattagtaacttcaggaacgaaaattc 32519498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 45663778 - 45663851
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||    
T  45663778 taggaccaaaagtcaaatgattaatatttgca-gggccagatttgaaggattagtaacttcagggacgaaaattc 45663851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 654 - 726
Target Start/End: Original strand, 8089723 - 8089791
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaat 726  Q
    ||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||| |||||    
T  8089723 taggaccaaaagtcaaatgattaatatttg----gggcagattggaaggattagtaacttcagggacaaaaat 8089791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 8089566 - 8089493
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||  |||||||||||    
T  8089566 taggaccaaaagtcaaatgattgatatttgca-ggggcagattggaaggattagtaacttcaaagacgaaaattc 8089493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 654 - 727
Target Start/End: Original strand, 17366892 - 17366964
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaatt 727  Q
    |||||||||||||||| ||||||||||||| | | ||||||||||||||||||||||||| |||||||||||||    
T  17366892 taggaccaaaagtcaattgattaatatttgca-gtggcagattggaaggattagtaactttagggacgaaaatt 17366964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 668 - 728
Target Start/End: Complemental strand, 10446932 - 10446873
Alignment:
Q  668 aaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  10446932 aaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggacgaaaattc 10446873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 17580442 - 17580369
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||| |||||||||||||||||||||||| | |||||| ||||||||||||| ||||||| |||||||||||||    
T  17580442 taggatcaaaagtcaaatgattaatatttgca-ggggcaaattggaaggattaataacttcggggacgaaaattc 17580369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 658 - 728
Target Start/End: Complemental strand, 32519265 - 32519196
Alignment:
Q  658 accaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||| | || ||| ||||||||||||||||| |||||||||||||||||    
T  32519265 accaaaagtcaaatgattaatatttgca-ggagcatattggaaggattagtaatttcagggacgaaaattc 32519196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 654 - 727
Target Start/End: Original strand, 4375821 - 4375893
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaatt 727  Q
    ||||||||||||||||||||||||  |||| | | ||||||||||||||||||||||||||| |||||||||||    
T  4375821 taggaccaaaagtcaaatgattaaattttgca-gtggcagattggaaggattagtaacttcatggacgaaaatt 4375893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 654 - 727
Target Start/End: Complemental strand, 9693856 - 9693784
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaatt 727  Q
    ||||||||||||||||||||||||  |||| | | |||||||||||||||||||||||||||| ||||||||||    
T  9693856 taggaccaaaagtcaaatgattaaactttgca-gtggcagattggaaggattagtaacttcagtgacgaaaatt 9693784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 655 - 728
Target Start/End: Original strand, 22731803 - 22731875
Alignment:
Q  655 aggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||  |||| ||||||| ||||| ||||||||||| ||||||||||||    
T  22731803 aggaccaaaagtcaaatgattaatatttg-cagggacagattgaaaggaatagtaacttcacggacgaaaattc 22731875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 657 - 728
Target Start/End: Original strand, 20911403 - 20911472
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||| |  || |||||||||| ||||||||||||||||||| |||||||    
T  20911403 gaccaaaagtcaaatgattaatatttgca--ggacagattggaatgattagtaacttcagggacaaaaattc 20911472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 661 - 728
Target Start/End: Complemental strand, 41846499 - 41846433
Alignment:
Q  661 aaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||| | | |||||||| ||||||||| |||||||||||||||||||||    
T  41846499 aaaagtcaaatgattaatatttgca-gtggcagattagaaggattactaacttcagggacgaaaattc 41846433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 18477021 - 18476948
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||| ||||||||||||||||||  |||| | | |||||||||||||||||||||||||||||||| |||||||    
T  18477021 taggatcaaaagtcaaatgattaaattttgca-gtggcagattggaaggattagtaacttcagggacaaaaattc 18476948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 28599697 - 28599770
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||  |||| || || ||||||||||||||| |||||||||| |||||||||||    
T  28599697 taggaccaaaagtcaaatgattaaattttgcaatgg-cagattggaaggatttgtaacttcagagacgaaaattc 28599770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 657 - 728
Target Start/End: Complemental strand, 22309542 - 22309472
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||| || | | |||||||||||||||||||||||||||  ||| |||||||    
T  22309542 gaccaaaagtcaaatgattaatatgtgca-gtggcagattggaaggattagtaacttcattgactaaaattc 22309472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 728
Target Start/End: Original strand, 9959107 - 9959168
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||| | ||||||||| ||||||||||||||||| |||| |||||||    
T  9959107 tcaaatgattaatatttgta-gtggcagattgaaaggattagtaacttcatggaccaaaattc 9959168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 728
Target Start/End: Original strand, 41846674 - 41846735
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| | | ||||||||||||||| ||||||||||||| ||||||||||    
T  41846674 tcaaatgattaatatttgca-gtggcagattggaaggagtagtaacttcaggaacgaaaattc 41846735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 728
Target Start/End: Original strand, 9694024 - 9694085
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| || |  || | |||||||||||||||||||||||||||||||||    
T  9694024 tcaaatgattaatatttgcaatga-caaaatggaaggattagtaacttcagggacgaaaattc 9694085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 728
Target Start/End: Original strand, 22309713 - 22309774
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| | | | ||||||||||  ||||||||||||||||||||||||||    
T  22309713 tcaaatgattaatatttgca-gtgtcagattggaacaattagtaacttcagggacgaaaattc 22309774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 728
Target Start/End: Complemental strand, 28599529 - 28599468
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| || || || | |||||||||||||||||||| ||||||||||||    
T  28599529 tcaaatgattaatatttgcaatgg-caaaatggaaggattagtaacttcatggacgaaaattc 28599468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 220 - 345
Target Start/End: Original strand, 1465743 - 1465868
Alignment:
Q  220 ttatcttacacatgcatccaatgatactttgctatgttaattaatgaatatgaaaacacataagttatcatattaattaattgatgtatcatcacatcat 319  Q
    |||| ||||||||||||||||||||   |||  | || ||||||| ||||||||||||||  |||| ||||||| || || ||||||   | ||||||||    
T  1465743 ttattttacacatgcatccaatgatgtgttgtcacgtcaattaataaatatgaaaacacacgagttgtcatattgatcaaatgatgtggaaacacatcat 1465842  T
Q  320 agaatgcatgtgtaaagtaatcgtac 345  Q
     | ||||||||||||| |||| ||||    
T  1465843 tggatgcatgtgtaaaataattgtac 1465868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 15756263 - 15756304
Alignment:
Q  258 aattaatgaatatgaaaacacataagttatcatattaattaa 299  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  15756263 aattaatgaatatgaaaacacataagttctcatattcattaa 15756304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 724
Target Start/End: Complemental strand, 5608700 - 5608637
Alignment:
Q  660 caaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaa 724  Q
    ||||||||||||||||||  |||| | | | || |||||||||||||||||||||||||||||||    
T  5608700 caaaagtcaaatgattaaattttgca-gtgccaaattggaaggattagtaacttcagggacgaaa 5608637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 668 - 728
Target Start/End: Complemental strand, 17366726 - 17366667
Alignment:
Q  668 aaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||| | | |||||||||||||||||| ||| |||||||| ||||||||    
T  17366726 aaatgattaatatttgca-gtggcagattggaaggattattaaattcagggaagaaaattc 17366667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 728
Target Start/End: Complemental strand, 9958936 - 9958866
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||| |||||||||||||  || ||| ||||||||| ||||| |||||||  |||||||||||    
T  9958936 gaccaaaagtcaactgattaatatttg-cagtggctgattggaagcattagcaacttcattgacgaaaattc 9958866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 728
Target Start/End: Original strand, 11830233 - 11830303
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||| |||||| |||| |||| |||| || |||||||||||||||||||||| || ||| ||||||||    
T  11830233 gaccaaaaatcaaataattagtattcgtaatgg-cagattggaaggattagtaactccatggatgaaaattc 11830303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 661 - 724
Target Start/End: Original strand, 19620786 - 19620848
Alignment:
Q  661 aaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaa 724  Q
    |||| |||||||||||||||||| | |||||| | ||||||||||||||| |||||||| ||||    
T  19620786 aaaattcaaatgattaatatttgca-ggggcaaaatggaaggattagtaagttcagggatgaaa 19620848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 661 - 728
Target Start/End: Complemental strand, 43681963 - 43681897
Alignment:
Q  661 aaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||| ||  |||| | ||||| |||||||||||| | ||||||||||||    
T  43681963 aaaagtcaaatgattaatatttgcaa-tggcaaaatggaatgattagtaactttatggacgaaaattc 43681897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 696 - 726
Target Start/End: Complemental strand, 10446959 - 10446929
Alignment:
Q  696 tggaaggattagtaacttcagggacgaaaat 726  Q
    |||||||||||||||||||||||||||||||    
T  10446959 tggaaggattagtaacttcagggacgaaaat 10446929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 654 - 725
Target Start/End: Original strand, 17580598 - 17580664
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaa 725  Q
    ||||||||||||||||    |||||||||| | | |||| |||||||||||||||||||| |||||||||||    
T  17580598 taggaccaaaagtcaa----ttaatatttgca-gtggcatattggaaggattagtaactttagggacgaaaa 17580664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 1465891 - 1465838
Alignment:
Q  191 tttaattagtatcctatatcattgtacgattatcttacacatgcatccaatgat 244  Q
    |||||||||||| ||  |||| ||||| ||||| ||||||||||||||||||||    
T  1465891 tttaattagtatactcgatcagtgtacaattattttacacatgcatccaatgat 1465838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 725
Target Start/End: Original strand, 37985003 - 37985067
Alignment:
Q  660 caaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaa 725  Q
    ||||||||||||||||||  |||| | | |||| ||||||||||||||||| ||||| ||||||||    
T  37985003 caaaagtcaaatgattaaattttgca-gtggcaaattggaaggattagtaatttcagagacgaaaa 37985067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 10439 - 10366
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  10439 taggaccaaaagtcaaatgattaatatttgca-ggggcaaattggaaggattagtaacttcagggacgaaaattc 10366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 14163 - 14236
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||    
T  14163 taggaccaaaagtcaaatgattaatatttgta-ggggcagattggaaggattagtaacttcagtgatgaaaattc 14236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 14007 - 13934
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||||||  ||||| || |||||||||||||||| || || |||||||||||    
T  14007 taggaccaaaagtcaaatgattaatatttg-caggggtaggttggaaggattagtaatttgagtgacgaaaattc 13934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 1e-24; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 1040412 - 1040339
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||    
T  1040412 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggacaaaaattc 1040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 1047318 - 1047245
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||    
T  1047318 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggacaaaaattc 1047245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 1047474 - 1047547
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||    
T  1047474 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagagacgaaaattc 1047547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 2953734 - 2953807
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  2953734 taggaccaaaaatcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggacgaaaattc 2953807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 26953215 - 26953142
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||    
T  26953215 taggaccaaaagtcaaatgattaatatttgca-ggggcagattgaaaggattagtaacttcagggacgaaaattc 26953142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 724
Target Start/End: Complemental strand, 33347530 - 33347461
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaa 724  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  33347530 taggaccaaaagtcaaatgattaatatttgta-ggggcagattggaagaattagtaacttcagggacgaaa 33347461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 33347686 - 33347759
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||    
T  33347686 taggaccaaaagtcaaatgattaatatttgcaaggg-cagattggaaggattagtaacttcaaggacgaaaattc 33347759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 49002990 - 49002917
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||    
T  49002990 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcatggacgaaaattc 49002917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 739333 - 739260
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||| ||||||||||||    
T  739333 taggaccaaaagtcaaatgattaatatttgca-ggggcatattggaaggattagtaacttcaaggacgaaaattc 739260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 5183620 - 5183547
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| | ||||||||||||    
T  5183620 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaactttatggacgaaaattc 5183547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 5183776 - 5183849
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||| |||||||||||| ||||||||||||||||||||||    
T  5183776 taggaccaaaagtcaaatgattaatatttgca-ggggcaaattggaaggattcgtaacttcagggacgaaaattc 5183849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 19755675 - 19755748
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||  |||||||    
T  19755675 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagggataaaaattc 19755748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 25414958 - 25414885
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| || ||||||||    
T  25414958 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagagaagaaaattc 25414885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 29043025 - 29043098
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||    
T  29043025 taggatcaaaagtcaaatgattaatatttgca-ggggcagattgaaaggattagtaacttcagggacgaaaattc 29043098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 37152808 - 37152881
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||    
T  37152808 taggactaaaagtcaaatgattaatatttgca-ggggcagattggaaggattagtaacttcagagacgaaaattc 37152881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 46849928 - 46850001
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||||    
T  46849928 taggaccaaaagtcaaatgattaatatttgca-ggggcaaattggaaggatcagtaacttcagggacgaaaattc 46850001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 654 - 727
Target Start/End: Original strand, 12577282 - 12577354
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaatt 727  Q
    |||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||| |||||||||||    
T  12577282 taggaccaaaagtcaaatgattaatatttgca-ggggcagattgaaaggattagtaacttcaaggacgaaaatt 12577354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 657 - 728
Target Start/End: Complemental strand, 2953575 - 2953505
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||| ||||||||||||||    
T  2953575 gaccaaaagtcaaatgattaatatttgca-ggggcagattgaaaggattagtaactttagggacgaaaattc 2953505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 657 - 728
Target Start/End: Complemental strand, 5926630 - 5926560
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||| |||| | |||||| |||||||||||||||||||||||||||||||||||    
T  5926630 gaccaaaagtcaaatgattaatgtttgca-ggggcatattggaaggattagtaacttcagggacgaaaattc 5926560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 29980753 - 29980680
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||| || |||||||||    
T  29980753 taggaccaaaagtcaaatgattaatatttgca-ggggcagattggaaagattagtaacttcatgggcgaaaattc 29980680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 29980908 - 29980981
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||| |||||||||||||||||| | |||||| ||||||||||||||||||||| |||||||||||||    
T  29980908 taggaccaaaaatcaaatgattaatatttgca-ggggcaaattggaaggattagtaacttccgggacgaaaattc 29980981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 49003145 - 49003218
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||| |||||||||||||||||| | | ||||||||||||||||||||||||||| ||||||||||||    
T  49003145 taggaccaaaaatcaaatgattaatatttgca-gaggcagattggaaggattagtaacttcatggacgaaaattc 49003218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 657 - 728
Target Start/End: Complemental strand, 46364685 - 46364615
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||| |||| ||||| | || |||||||||||||||||||||||||||    
T  46364685 gaccaaaagtcaaatgattaatatttgt-agggacagatggaaaagattagtaacttcagggacgaaaattc 46364615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 5926791 - 5926864
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||| |||||| | | ||||||||||| ||||||||||||||||||| ||||||||    
T  5926791 taggaccaaaagtcaaatgattactatttgca-gaggcagattggacggattagtaacttcagggatgaaaattc 5926864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 24701384 - 24701311
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||| ||||||||||  |||| | | ||||||||||||||||||||||||||||||||||||||||    
T  24701384 taggaccaaaagttaaatgattaaattttgca-gtggcagattggaaggattagtaacttcagggacgaaaattc 24701311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 26953371 - 26953444
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||||| || | |||||||||||| ||||||||||||||| | ||||||||    
T  26953371 taggaccaaaagtcaaatgattaatatttgcaa-gagcagattggaagaattagtaacttcaggaatgaaaattc 26953444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 37152652 - 37152579
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||| ||||||||||||||||| |||||| | ||| ||||||||||||||||||||||||| ||||||||||||    
T  37152652 taggatcaaaagtcaaatgattagtatttgcacggg-cagattggaaggattagtaacttcatggacgaaaattc 37152579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 654 - 727
Target Start/End: Original strand, 48380953 - 48381025
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaatt 727  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||||| |||||| | |||||||||||    
T  48380953 taggaccaaaagtcaaatgattaatatttg-cagcggcagattggaaggattaataactttaaggacgaaaatt 48381025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 660 - 728
Target Start/End: Complemental strand, 37152541 - 37152474
Alignment:
Q  660 caaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||| |||||| ||||| || |||||||||||||||||||||| ||||||||||||    
T  37152541 caaaagtcaaatgattagtatttgcaaggg-catattggaaggattagtaacttcatggacgaaaattc 37152474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 657 - 720
Target Start/End: Complemental strand, 8890322 - 8890260
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggac 720  Q
    ||||||||||||||||||||||||||| | | |||||||||||| |||||||||||||||||||    
T  8890322 gaccaaaagtcaaatgattaatatttgga-gtggcagattggaaagattagtaacttcagggac 8890260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 657 - 728
Target Start/End: Original strand, 49990069 - 49990139
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||| ||||| ||||| ||||||||| ||||||||  |||||||||||    
T  49990069 gaccaaaagtcaaatgattaatatttgt-aggggtagatttgaaggattaataacttcaaagacgaaaattc 49990139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 739488 - 739561
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||| |||||||||||||||||||||||| | ||| ||||||| ||||||||||||||||| | ||||||||||    
T  739488 taggatcaaaagtcaaatgattaatatttgca-gggacagattgaaaggattagtaacttcatgtacgaaaattc 739561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 6056490 - 6056417
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||||||  |||| || ||||||||||| ||||| || ||||||||||||||    
T  6056490 taggaccaaaagtcaaatgattaatatttg-cagggacatattggaaggatcagtaattttagggacgaaaattc 6056417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 25415114 - 25415187
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||| |||||||||| | ||  || |||||||||||||||||||||||| ||||||||||    
T  25415114 taggaccaaaagtcaaatggttaatatttgca-ggaacatattggaaggattagtaacttcaggaacgaaaattc 25415187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 658 - 728
Target Start/End: Original strand, 33030609 - 33030678
Alignment:
Q  658 accaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||| | | ||||||||| |||||||||||| |||| ||||||||||||    
T  33030609 accaaaagtcaaatgattaatatttgca-gtggcagattgaaaggattagtaatttcatggacgaaaattc 33030678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 46364845 - 46364918
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||| |||||||||||||||||||||||| | |||||| |||| |||||||||||| |||| ||||||||||||    
T  46364845 taggatcaaaagtcaaatgattaatatttgca-ggggcatattgaaaggattagtaatttcaaggacgaaaattc 46364918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 657 - 728
Target Start/End: Original strand, 6056651 - 6056722
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaactt-cagggacgaaaattc 728  Q
    ||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||||| |||||| ||||||||    
T  6056651 gaccaaatgtcaaatgattaatatttgca-ggggcagattgaaaggattagtaacttacagggatgaaaattc 6056722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 661 - 728
Target Start/End: Complemental strand, 12577117 - 12577051
Alignment:
Q  661 aaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||| | ||||||||||| || ||||||||||||||  |||||||||||    
T  12577117 aaaagtcaaatgattaatatttgca-ggggcagattgaaatgattagtaacttcatagacgaaaattc 12577051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 657 - 728
Target Start/End: Complemental strand, 46849769 - 46849699
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||| ||||||||  | ||||||||||| ||| |||| |||||||||||||||||||||    
T  46849769 gaccaaaagtcaaatgactaatatttaca-ggggcagattgaaagaattaataacttcagggacgaaaattc 46849699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 654 - 725
Target Start/End: Complemental strand, 49989909 - 49989839
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaa 725  Q
    ||||||||||||||||||||||||||||||  || ||||||||| |||||||| |||||||| | |||||||    
T  49989909 taggaccaaaagtcaaatgattaatatttg-cagaggcagattgaaaggattaataacttcaagaacgaaaa 49989839  T

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Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 728
Target Start/End: Original strand, 24701551 - 24701612
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||| ||||||||||||| || || | |||||||||||||||||||||||||||||||||    
T  24701551 tcaaatggttaatatttgtaatgg-caaaatggaaggattagtaacttcagggacgaaaattc 24701612  T

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Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 728
Target Start/End: Complemental strand, 33030436 - 33030375
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||    
T  33030436 tcaaatgattcatatttgca-gtggcagattggaagaattagtaacttcagggacgaaaattc 33030375  T

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Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 657 - 725
Target Start/End: Complemental strand, 29042866 - 29042799
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaa 725  Q
    |||||||| |||||||||||||||||| | ||| |||||||||||||||| ||||||| | ||||||||    
T  29042866 gaccaaaaatcaaatgattaatatttgca-gggacagattggaaggattaataacttccgcgacgaaaa 29042799  T

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Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 689 - 728
Target Start/End: Complemental strand, 48380761 - 48380722
Alignment:
Q  689 ggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  48380761 ggcagattggaaggattagtaacttcagcgacgaaaattc 48380722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 728
Target Start/End: Original strand, 10019655 - 10019716
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| || || || | |||||||||||||||||||||||| ||||||||    
T  10019655 tcaaatgattaatatttgcaatgg-caaaatggaaggattagtaacttcagggatgaaaattc 10019716  T

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Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 724
Target Start/End: Original strand, 46545013 - 46545070
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaa 724  Q
    |||||||||||||||||| | | |||| | |||||||||||||||||||||||||||||    
T  46545013 tcaaatgattaatatttgca-gtggcaaaatggaaggattagtaacttcagggacgaaa 46545070  T

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Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 261 - 335
Target Start/End: Complemental strand, 48252487 - 48252413
Alignment:
Q  261 taatgaatatgaaaacacataagttatcatattaattaattgatgtatcatcacatcatagaatgcatgtgtaaa 335  Q
    |||| |||||||||| |||| |||||||||||| ||||||||||||   | |||||||| ||||| |||||||||    
T  48252487 taataaatatgaaaatacatgagttatcatatttattaattgatgtggaaacacatcattgaatgtatgtgtaaa 48252413  T

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Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 689 - 728
Target Start/End: Complemental strand, 30830210 - 30830171
Alignment:
Q  689 ggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  30830210 ggcagattggaatgattattaacttcagggacgaaaattc 30830171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 220 - 306
Target Start/End: Complemental strand, 35120217 - 35120131
Alignment:
Q  220 ttatcttacacatgcatccaatgatactttgctatgttaattaatgaatatgaaaacacataagttatcatattaattaattgatgt 306  Q
    |||| ||||||||||||||||||||   |||| |||| ||||||| |||| || ||| | || ||| ||||||| ||||||||||||    
T  35120217 ttattttacacatgcatccaatgatgtattgccatgtcaattaataaatacgacaactcgtatgttttcatattcattaattgatgt 35120131  T

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Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 662 - 728
Target Start/End: Complemental strand, 35312080 - 35312015
Alignment:
Q  662 aaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||  |||| || |  |||||||||| ||||||||||||||| |||||||||||    
T  35312080 aaagtcaaatgattaaattttgcaatga-cagattggaatgattagtaacttcagtgacgaaaattc 35312015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 213 - 306
Target Start/End: Original strand, 51587373 - 51587464
Alignment:
Q  213 tgtacgattatcttacacatgcatccaatgatactttgctatgttaattaatgaatatgaaaacacataagttatcatattaattaattgatgt 306  Q
    ||||| ||||| ||||||||||||| ||  ||   |||||| || ||||||||||||||||||||||| ||||  |||||  ||||||||||||    
T  51587373 tgtacaattattttacacatgcatcaaacaatgtgttgctacgtcaattaatgaatatgaaaacacatgagttgacatat--attaattgatgt 51587464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 713
Target Start/End: Complemental strand, 6334764 - 6334712
Alignment:
Q  660 caaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaactt 713  Q
    |||||| ||||||||||||||||| | | ||||||| |||||||||||||||||    
T  6334764 caaaagccaaatgattaatatttgca-gtggcagatcggaaggattagtaactt 6334712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 727
Target Start/End: Original strand, 52455037 - 52455097
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaatt 727  Q
    |||||||||||||| ||| | | |||||||||||||||||| |||||| | |||||||||||    
T  52455037 tcaaatgattaatagttgca-gtggcagattggaaggattaataactttatggacgaaaatt 52455097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 51; Significance: 8e-20; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 654 - 728
Target Start/End: Original strand, 10932 - 11005
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||||||| |||||| ||||| || |||||||||||||| ||||||||||||    
T  10932 taggaccaaaagtcaaatgattaatatttgt-aggggcggattgaaaagattagtaacttcatggacgaaaattc 11005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 10776 - 10703
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||||||||||||||||||||||||||  ||||||| |||| |||||||| ||| |||||||||||||||||    
T  10776 taggaccaaaagtcaaatgattaatatttg-caggggcatattgaaaggattaataatttcagggacgaaaattc 10703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 666 - 728
Target Start/End: Complemental strand, 8535 - 8474
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||    
T  8535 tcaaatgattaatatttgca-gtggcagattggaaggattagtaacttcagggacgaaaattc 8474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 654 - 728
Target Start/End: Complemental strand, 10967 - 10894
Alignment:
Q  654 taggaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||| |||||||||||||||||||||||| ||  |||| | |||||||||||||||||||  ||||||||||||    
T  10967 taggatcaaaagtcaaatgattaatatttgcaa-tggcaaaatggaaggattagtaacttcgtggacgaaaattc 10894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 728
Target Start/End: Original strand, 14510 - 14577
Alignment:
Q  660 caaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    ||||||| |||||||||||||||  | | |||||||| |||||||||||||||||| ||||||||||||    
T  14510 caaaagttaaatgattaatatttaca-gtggcagatttgaaggattagtaacttcaaggacgaaaattc 14577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 666 - 728
Target Start/End: Complemental strand, 14337 - 14276
Alignment:
Q  666 tcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaattc 728  Q
    |||||| ||||||||||| | | |||| |||||||||||||||||| ||| ||||||||||||    
T  14337 tcaaattattaatatttgca-gtggcaaattggaaggattagtaacctcaaggacgaaaattc 14276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 727
Target Start/End: Original strand, 120473 - 120540
Alignment:
Q  657 gaccaaaagtcaaatgattaatatttgtaaggggcagattggaaggattagtaacttcagggacgaaaatt 727  Q
    |||||||||||||||||||||||||||| || | || | ||||||||||| ||||||  ||||||||||||    
T  120473 gaccaaaagtcaaatgattaatatttgt-agtgacaaaatggaaggattaataactt--gggacgaaaatt 120540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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