View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18485_low_12 (Length: 283)
Name: NF18485_low_12
Description: NF18485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18485_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 3155853 - 3156104
Alignment:
| Q |
13 |
aatattaatttgaaaaattgaatgtaattaactaatgtgccagtgtcggtgtccgacactcagacatcaacacttcttcgacttgaagcgttggcgctac |
112 |
Q |
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| T |
3155853 |
aatattaatttgaaaaattgaatgtaattaactaatgtgccagtgtcggtgtccgacactcagacatcaacacttcttcgatttaaagcgttggcgctac |
3155952 |
T |
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| Q |
113 |
ataactaattaatgaaaaattgaattaactacatgtgtcagtgtcatgtctgtgtccgacactcagacaacacaccttcgatcttaagtgccggtgctaa |
212 |
Q |
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| T |
3155953 |
ataacaaattaatgaaaaattgaattaactacatgtgtcagcgtcatgtctgtgtccgacactcagacaacacaccttcgatctgaagtgccggtgctaa |
3156052 |
T |
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| Q |
213 |
actactacataataaattaatgaaaaagtgacaaaaaattgagcaaccaagc |
264 |
Q |
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| T |
3156053 |
actactacataataaattaatgaaaaagtgacaaaaaattgagcaaccaagc |
3156104 |
T |
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