View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18485_low_4 (Length: 518)

Name: NF18485_low_4
Description: NF18485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18485_low_4
NF18485_low_4
[»] chr6 (67 HSPs)
chr6 (4-500)||(27698060-27698556)
chr6 (241-499)||(26802568-26802826)
chr6 (241-499)||(27677417-27677675)
chr6 (241-499)||(27706205-27706463)
chr6 (277-500)||(27718218-27718441)
chr6 (241-499)||(27592823-27593081)
chr6 (241-499)||(27679072-27679330)
chr6 (1-238)||(28786712-28786949)
chr6 (241-499)||(27604508-27604766)
chr6 (1-238)||(28792833-28793070)
chr6 (277-500)||(27610841-27611064)
chr6 (10-238)||(28781575-28781803)
chr6 (10-244)||(27679418-27679652)
chr6 (10-245)||(26802910-26803148)
chr6 (1-244)||(27592492-27592735)
chr6 (10-244)||(27705884-27706118)
chr6 (10-245)||(27604184-27604421)
chr6 (10-242)||(27427092-27427326)
chr6 (1-244)||(27677091-27677331)
chr6 (287-499)||(28786404-28786616)
chr6 (287-499)||(28792525-28792737)
chr6 (296-499)||(26884291-26884494)
chr6 (10-187)||(27717979-27718156)
chr6 (287-499)||(28781265-28781477)
chr6 (296-499)||(27427464-27427667)
chr6 (10-192)||(27610600-27610782)
chr6 (287-480)||(26861758-26861951)
chr6 (368-500)||(27724775-27724907)
chr6 (4-137)||(26623846-26623979)
chr6 (4-137)||(26729823-26729956)
chr6 (241-469)||(27531003-27531228)
chr6 (4-137)||(31285134-31285267)
chr6 (18-165)||(27530789-27530936)
chr6 (2-238)||(26646951-26647189)
chr6 (2-238)||(26752919-26753157)
chr6 (4-138)||(26656539-26656673)
chr6 (4-138)||(26762510-26762644)
chr6 (295-478)||(31284435-31284618)
chr6 (37-240)||(25539013-25539218)
chr6 (37-240)||(26143338-26143543)
chr6 (261-393)||(25538772-25538904)
chr6 (83-162)||(25580272-25580351)
chr6 (263-393)||(25579951-25580081)
chr6 (263-393)||(26143097-26143227)
chr6 (37-162)||(25483609-25483734)
chr6 (4-71)||(26824460-26824527)
chr6 (261-322)||(26056229-26056290)
chr6 (261-322)||(26076199-26076260)
chr6 (263-333)||(26646771-26646838)
chr6 (263-333)||(26752739-26752806)
chr6 (83-138)||(25511512-25511567)
chr6 (263-499)||(25481868-25482104)
chr6 (444-499)||(26646605-26646660)
chr6 (444-499)||(26752573-26752628)
chr6 (17-71)||(25492806-25492860)
chr6 (287-393)||(27214652-27214758)
chr6 (287-393)||(27234470-27234576)
chr6 (46-136)||(28297256-28297346)
chr6 (46-136)||(28514727-28514817)
chr6 (17-70)||(27337582-27337635)
chr6 (296-361)||(27337923-27337988)
chr6 (17-70)||(27398322-27398375)
chr6 (296-361)||(27398663-27398728)
chr6 (444-480)||(26823985-26824021)
chr6 (83-135)||(27664758-27664810)
chr6 (46-134)||(28227530-28227618)
chr6 (327-475)||(28234713-28234861)
[»] scaffold0419 (2 HSPs)
scaffold0419 (1-231)||(7968-8198)
scaffold0419 (296-499)||(7651-7854)
[»] scaffold0277 (4 HSPs)
scaffold0277 (1-231)||(13146-13376)
scaffold0277 (296-500)||(4529-4733)
scaffold0277 (1-223)||(4183-4407)
scaffold0277 (296-499)||(13490-13693)
[»] scaffold0349 (4 HSPs)
scaffold0349 (277-499)||(3259-3482)
scaffold0349 (277-500)||(14195-14418)
scaffold0349 (10-187)||(3019-3196)
scaffold0349 (150-192)||(14093-14135)
[»] chr4 (19 HSPs)
chr4 (1-245)||(18730971-18731215)
chr4 (1-245)||(18698867-18699111)
chr4 (1-245)||(18723552-18723796)
chr4 (10-242)||(18074229-18074463)
chr4 (1-245)||(18654944-18655188)
chr4 (10-218)||(18679036-18679244)
chr4 (296-499)||(18073888-18074091)
chr4 (287-361)||(18655313-18655387)
chr4 (287-361)||(18723921-18723995)
chr4 (296-361)||(18731349-18731414)
chr4 (408-473)||(17989013-17989078)
chr4 (287-361)||(18679403-18679477)
chr4 (296-361)||(18699245-18699310)
chr4 (444-499)||(18655470-18655525)
chr4 (454-499)||(18679570-18679615)
chr4 (450-499)||(18699399-18699448)
chr4 (444-493)||(18724078-18724127)
chr4 (444-493)||(18731497-18731546)
chr4 (386-474)||(5090902-5090990)
[»] scaffold0003 (2 HSPs)
scaffold0003 (10-242)||(60037-60271)
scaffold0003 (296-499)||(59696-59899)
[»] chr1 (5 HSPs)
chr1 (4-245)||(267814-268067)
chr1 (288-499)||(28127516-28127727)
chr1 (288-499)||(28164200-28164410)
chr1 (4-135)||(28163849-28163980)
chr1 (4-138)||(28127149-28127283)
[»] chr8 (1 HSPs)
chr8 (4-164)||(29273312-29273472)
[»] chr5 (1 HSPs)
chr5 (10-71)||(17801698-17801759)
[»] scaffold0038 (1 HSPs)
scaffold0038 (46-134)||(28028-28116)


Alignment Details
Target: chr6 (Bit Score: 413; Significance: 0; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 4 - 500
Target Start/End: Original strand, 27698060 - 27698556
Alignment:
Q  4 ttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatt 103  Q
    ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27698060 ttatcaagaattgatttcactctttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatt 27698159  T
Q  104 tgactatctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatctatgtactcagaatat 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27698160 tgactatctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgaaacaacatcacaatcacatctatgtactcagaatat 27698259  T
Q  204 attataaatttctaactatttcgacatataaataactaatacaaaagggaaatataggatttaagtaaagttgggtaccgaggaggactatgatggtagc 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||    
T  27698260 attataaatttctaactatttcgacatataaataactaatacaaaagggaaatataggatttaagtaaagttgggtacctgggaggactatcatggtagc 27698359  T
Q  304 cggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttgaaacctattttcatgctcagccaatgc 403  Q
    |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| ||   ||||||||||||||| ||||||||||||||||||||    
T  27698360 cggacaagttagcagcctggctcagagcctctttccatccctgcaacctctccatgtttttcggatcattttgaaacctcttttcatgctcagccaatgc 27698459  T
Q  404 ttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagcactgaatt 500  Q
    || ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||    
T  27698460 tttgccataactacctttatgatgtctcacattagttggttccacaccgaagaaaacaggcaaaacgaggcgaccctttgtctcgtagcagtgaatt 27698556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 241 - 499
Target Start/End: Complemental strand, 26802826 - 26802568
Alignment:
Q  241 aatacaaaagggaaatataggatttaagtaaagttgggtaccgaggaggactatgatggtagccggacaagttagcagcttggctcagagccactttcca 340  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  26802826 aatataaaagggaaaaataggatttaagtaaagttgggtaccgaggaggactatcatggtagccggacaagttagcagcctggctcagagccactttcca 26802727  T
Q  341 tcgctgcaacctctccatgttatttttatcattttgaaacctattttcatgctcagccaatgcttggccataactacctttatgatgtcgcacattagtt 440  Q
    ||||| |||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||  ||||| |||| | ||||||| |||||||||||     
T  26802726 tcgctccaacctctccatgttatccttatcattttgaaaccttttttcatgctcagccaatgcttcaccatagctacatgtatgatggcgcacattagta 26802627  T
Q  441 ggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagcactgaat 499  Q
    || |||||||||||||||| |||||| ||||||||||||| |||||| ||||| |||||    
T  26802626 ggatccacaccaaagaaaataggcaagacgaggcgaccctttgtcttatagcaatgaat 26802568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 241 - 499
Target Start/End: Original strand, 27677417 - 27677675
Alignment:
Q  241 aatacaaaagggaaatataggatttaagtaaagttgggtaccgaggaggactatgatggtagccggacaagttagcagcttggctcagagccactttcca 340  Q
    |||| |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  27677417 aatagaaaagggaaaaataggatttaagtaaagttgggtacccaggaggactatcatggtagccggacaagttagcagcctggctcagagcctctttcca 27677516  T
Q  341 tcgctgcaacctctccatgttatttttatcattttgaaacctattttcatgctcagccaatgcttggccataactacctttatgatgtcgcacattagtt 440  Q
    || |||||||||||||||| | ||   ||||||||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||| ||||     
T  27677517 tccctgcaacctctccatgcttttcggatcattttgaaacctcttttcatgctcagccaatgcttcaccataactacctttctgatgtcgcacaatagta 27677616  T
Q  441 ggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagcactgaat 499  Q
    ||||||||| ||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  27677617 ggttccacagcaaagaaaacaggcagaacgaggcgaccctttgtcttgtagcagtgaat 27677675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 241 - 499
Target Start/End: Original strand, 27706205 - 27706463
Alignment:
Q  241 aatacaaaagggaaatataggatttaagtaaagttgggtaccgaggaggactatgatggtagccggacaagttagcagcttggctcagagccactttcca 340  Q
    |||| |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  27706205 aatagaaaagggaaaaataggatttaagtaaagttgggtacccaggaggactatcatggtagccggacaagttagcagcctggctcagagcctctttcca 27706304  T
Q  341 tcgctgcaacctctccatgttatttttatcattttgaaacctattttcatgctcagccaatgcttggccataactacctttatgatgtcgcacattagtt 440  Q
    || |||||||||||||||||| ||   ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||| ||||||||||| ||||     
T  27706305 tccctgcaacctctccatgtttttcggatcattttgaaacctcttttcatgctcagccaatgcttcaccataactacctttacgatgtcgcacaatagta 27706404  T
Q  441 ggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagcactgaat 499  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||    
T  27706405 ggttctacaccaaataaaacaggcagaacgaggcgaccctttgtcttgtagcagtgaat 27706463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 277 - 500
Target Start/End: Original strand, 27718218 - 27718441
Alignment:
Q  277 ggtaccgaggaggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttg 376  Q
    |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27718218 ggtacccaggaggactatcatggtagccggacaagttagcagcctggctcagagccactttccatcgctgcaacctctccatgttattcttatcattttg 27718317  T
Q  377 aaacctattttcatgctcagccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcga 476  Q
    |||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||| ||||| |||||||| || ||||||||||||||||||||||||    
T  27718318 aaacctcttttcatgctcagccaatgcttcaccataactacctttctgatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacgaggcga 27718417  T
Q  477 ccctctgtcttgtagcactgaatt 500  Q
    |||| |||||||||||| ||||||    
T  27718418 ccctttgtcttgtagcagtgaatt 27718441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 241 - 499
Target Start/End: Original strand, 27592823 - 27593081
Alignment:
Q  241 aatacaaaagggaaatataggatttaagtaaagttgggtaccgaggaggactatgatggtagccggacaagttagcagcttggctcagagccactttcca 340  Q
    |||| |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||  |||||||    
T  27592823 aatagaaaagggaaaaataggatttaagtaaagttgggtacccaggaggactatcatggtagccggacaagttagcagcctggctcagagcgtctttcca 27592922  T
Q  341 tcgctgcaacctctccatgttatttttatcattttgaaacctattttcatgctcagccaatgcttggccataactacctttatgatgtcgcacattagtt 440  Q
    || |||||||||||||||||| ||   ||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| ||      
T  27592923 tccctgcaacctctccatgtttttcggatcattttgaaacctcttttcatgctcagccaatgcttcaccataactacctttatgatgtcgcacatgagaa 27593022  T
Q  441 ggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagcactgaat 499  Q
    || ||||||||||||||||||||||||||  ||||||||| |||||||||||| |||||    
T  27593023 ggatccacaccaaagaaaacaggcaaaacagggcgaccctttgtcttgtagcaatgaat 27593081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 241 - 499
Target Start/End: Complemental strand, 27679330 - 27679072
Alignment:
Q  241 aatacaaaagggaaatataggatttaagtaaagttgggtaccgaggaggactatgatggtagccggacaagttagcagcttggctcagagccactttcca 340  Q
    |||| |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||  ||||||    
T  27679330 aatagaaaagggaaaaataggatttaagtaaagttgggtacccaggaggactatcatggtagccggacaagttagcagcctggctcagagcctttttcca 27679231  T
Q  341 tcgctgcaacctctccatgttatttttatcattttgaaacctattttcatgctcagccaatgcttggccataactacctttatgatgtcgcacattagtt 440  Q
    ||  ||||||||||||||||| ||   ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||| |||||||||||  |||     
T  27679230 tccttgcaacctctccatgtttttcggatcattttgaaacctcttttcatgctcagccaatgcttcaccataactacctttacgatgtcgcacaacagta 27679131  T
Q  441 ggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagcactgaat 499  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  27679130 ggttccacaccaaagaaaacaggcagaacgaggcgaccctttgtcttgtagcagtgaat 27679072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 28786949 - 28786712
Alignment:
Q  1 cctttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgt 100  Q
    |||| ||| ||||| |||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28786949 ccttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgt 28786850  T
Q  101 atttgactatctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatctatgtactcagaa 200  Q
    |||||||||| ||| ||||||||||||||||||||||| || ||||   ||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  28786849 atttgactatatctccaataaacttgtattcatatctattcatgtcatataagataagttagtatgtaacaacatcacaatcacatccatgtactcagaa 28786750  T
Q  201 tatattataaatttctaactatttcgacatataaataa 238  Q
    |||| |||| |||||||||||||| |||||| ||||||    
T  28786749 tatagtatacatttctaactattttgacataaaaataa 28786712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 241 - 499
Target Start/End: Original strand, 27604508 - 27604766
Alignment:
Q  241 aatacaaaagggaaatataggatttaagtaaagttgggtaccgaggaggactatgatggtagccggacaagttagcagcttggctcagagccactttcca 340  Q
    ||||||||||||||| |||||||||| |||  |||| ||||| ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  27604508 aatacaaaagggaaaaataggatttatgtagtgttgagtacccaggaggactatcatggtagccggaaaagttagcagcctggctcagagccactttcca 27604607  T
Q  341 tcgctgcaacctctccatgttatttttatcattttgaaacctattttcatgctcagccaatgcttggccataactacctttatgatgtcgcacattagtt 440  Q
    ||||||||||||||  |||||||  | ||||||||||||||| |||| |||||||||||||||||| || ||||||||||||||||||||||||| ||      
T  27604608 tcgctgcaacctctttatgttatcctcatcattttgaaacctttttttatgctcagccaatgcttgaccgtaactacctttatgatgtcgcacatgagaa 27604707  T
Q  441 ggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagcactgaat 499  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| ||||||| |||||    
T  27604708 ggttccacaccaaagaaaacaggcaaaacgacgcgaccctttgtcgtgtagcaatgaat 27604766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 28793070 - 28792833
Alignment:
Q  1 cctttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgt 100  Q
    |||| ||| ||||| |||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28793070 ccttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgt 28792971  T
Q  101 atttgactatctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatctatgtactcagaa 200  Q
    |||||||||| ||| ||||||||||||||||||||||| |  ||||   ||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  28792970 atttgactatatctccaataaacttgtattcatatctattaatgtccgataagataagttagtatgtaacaacatcacaatcacatccatgtactcagaa 28792871  T
Q  201 tatattataaatttctaactatttcgacatataaataa 238  Q
    |||| |||| |||||||||||||| |||||| ||||||    
T  28792870 tatagtatacatttctaactattttgacataaaaataa 28792833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 277 - 500
Target Start/End: Original strand, 27610841 - 27611064
Alignment:
Q  277 ggtaccgaggaggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttg 376  Q
    |||||| ||||||||||| |||||||||||| ||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  27610841 ggtacccaggaggactatcatggtagccggaaaagtttgcagcctggctcagagccactttccatccctgcaacctctccatgttattcttatcattttg 27610940  T
Q  377 aaacctattttcatgctcagccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcga 476  Q
    |||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||| ||||| |||||||| || ||||||||||||||||||||||||    
T  27610941 aaacctcttttcatgctcagccaatgcttcaccataactacctttctgatgtcgcactttagtaggttccacgccgaagaaaacaggcaaaacgaggcga 27611040  T
Q  477 ccctctgtcttgtagcactgaatt 500  Q
    |||| |||||||||||| ||||||    
T  27611041 ccctttgtcttgtagcagtgaatt 27611064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 10 - 238
Target Start/End: Complemental strand, 28781803 - 28781575
Alignment:
Q  10 agaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgacta 109  Q
    ||||| |||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28781803 agaagcgatttcacttgttgtactcgggactgtaatccaacagggtaattggcaacatgtaagtgctgacgactgatcttgttggagatgtatttgacta 28781704  T
Q  110 tctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatctatgtactcagaatatattata 209  Q
    | ||  ||||||||||||||||||||||| || ||||   ||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  28781703 tatcgccaataaacttgtattcatatctattcatgtcatataagataagttagtatgtaacaacatcacaatcacatccatgtactcagaatatagtata 28781604  T
Q  210 aatttctaactatttcgacatataaataa 238  Q
     |||||||||||||| |||||| ||||||    
T  28781603 catttctaactattttgacataaaaataa 28781575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 10 - 244
Target Start/End: Complemental strand, 27679652 - 27679418
Alignment:
Q  10 agaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgacta 109  Q
    ||||| |||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27679652 agaagcgatttcacttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaagggctgtcgactgatcttgttggagatgtatttgacta 27679553  T
Q  110 tctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatctatgtactcagaatatattata 209  Q
    ||| | |||||| |||||||||||||||| || |||  | ||||| |||||||| | ||||||||||||||||||||| ||||||| ||||| |||||||    
T  27679552 tctttccaataagcttgtattcatatctattcatgtgcaataagataagttagtgtctaacaacatcacaatcacatccatgtactaagaatgtattata 27679453  T
Q  210 aatttctaactatttcgacatataaataactaata 244  Q
     ||||||||||||||||||||||||||||||||||    
T  27679452 catttctaactatttcgacatataaataactaata 27679418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 26803148 - 26802910
Alignment:
Q  10 agaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgacta 109  Q
    ||||| |||||||||| ||||||| |||| || ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26803148 agaagcgatttcacttcttgtactcgagagtgcaatccaacagggtaattagcaacatgtaagggctgacgattgatcttgttggagatgtatttgacta 26803049  T
Q  110 tctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatg---taacaacatcacaatcacatctatgtactcagaatatatt 206  Q
    ||||| |||| |||||||||||||||||| || |||| |  |||| |||||||||||   ||||||||||||||||||||| ||||||||| ||||||||    
T  26803048 tctctccaatcaacttgtattcatatctattcatgtccaacaagataagttagtatgtactaacaacatcacaatcacatccatgtactcataatatatt 26802949  T
Q  207 ataaatttctaactatttcgacatataaataactaatac 245  Q
    ||| ||||||||||||||| |||||||||||||||||||    
T  26802948 atacatttctaactatttcaacatataaataactaatac 26802910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 27592492 - 27592735
Alignment:
Q  1 cctttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgt 100  Q
    |||| ||| ||||| |||||||||| ||||||| ||||||| ||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  27592492 ccttcatcaagaagcgatttcacttgttgtactcgagactgcaatccaacagggtaagtggcaacatttaagggctgtcgactgatcttgttggagatgt 27592591  T
Q  101 atttgactatctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatctatgtactcagaa 200  Q
    |||||||||||| | |||||| |||||||||||||||| || |||  | ||||| |||||||| | ||||||||||||||||||||| ||||||| ||||    
T  27592592 atttgactatctttccaataagcttgtattcatatctattcatgtgcaataagataagttagtgtctaacaacatcacaatcacatccatgtactaagaa 27592691  T
Q  201 tatattataaatttctaactatttcgacatataaataactaata 244  Q
    | ||||||| ||||||||||||||||||||||||||||||||||    
T  27592692 tgtattatacatttctaactatttcgacatataaataactaata 27592735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 10 - 244
Target Start/End: Original strand, 27705884 - 27706118
Alignment:
Q  10 agaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgacta 109  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||    
T  27705884 agaagtgatttcacttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaagggatgtcgactgatcttgttggagatgtatttgacta 27705983  T
Q  110 tctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatctatgtactcagaatatattata 209  Q
    ||| | |||||| |||||||||||||||| || |||  | ||||| |||||||| | |||||||||| |||||||||| ||||||| ||||| ||||||     
T  27705984 tctttccaataagcttgtattcatatctattcatgtgcaataagataagttagtgtctaacaacatcccaatcacatccatgtactaagaatgtattatt 27706083  T
Q  210 aatttctaactatttcgacatataaataactaata 244  Q
     ||||||||||||||||||||||||||||||||||    
T  27706084 catttctaactatttcgacatataaataactaata 27706118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 27604184 - 27604421
Alignment:
Q  10 agaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgacta 109  Q
    ||||| |||||||||| ||||||| ||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | ||| ||||    
T  27604184 agaagagatttcacttgttgtactcgagactgcaatccaataggataattggcaacatgtaagggctgacgactgatcttgttggagatttctttcacta 27604283  T
Q  110 tctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatctatgt--actcagaatatatta 207  Q
    ||| | |||||| || ||||||||||||| || |||| | ||||| |||||||||||||||||||||| ||||||||| ||||  |||||||||||||||    
T  27604284 tctttccaataagctcgtattcatatctattcatgtccaataagataagttagtatgtaacaacatcataatcacatccatgtacactcagaatatatta 27604383  T
Q  208 taaatttctaactatttcgacatataaataactaatac 245  Q
    || |||||||||||||| ||||||||||||||||||||    
T  27604384 tacatttctaactattttgacatataaataactaatac 27604421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 10 - 242
Target Start/End: Original strand, 27427092 - 27427326
Alignment:
Q  10 agaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgacta 109  Q
    ||||| |||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  27427092 agaagcgatttcacttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaaggactgtcgactgatcttgttggagatgtatttgacta 27427191  T
Q  110 tctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacat--cacaatcacatctatgtactcagaatatatta 207  Q
    ||| | |||||| || ||||||||||||| || |||| | ||| | ||||||||||||||||||||  |||||||||||| ||||||||| |||||||||    
T  27427192 tctttccaataagctcgtattcatatctattcatgtccaataatataagttagtatgtaacaacatcacacaatcacatccatgtactcataatatatta 27427291  T
Q  208 taaatttctaactatttcgacatataaataactaa 242  Q
    || |||| ||||||||| |||||||||||||||||    
T  27427292 tacatttttaactattttgacatataaataactaa 27427326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 27677091 - 27677331
Alignment:
Q  1 cctttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgt 100  Q
    |||| ||| ||||| ||||||| || ||||||| ||||||| ||||||||||||||| |||||||||||||||| ||  |||||||||||||||||||||    
T  27677091 ccttcatcaagaagcgatttcatttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaagggttgttgactgatcttgttggagatgt 27677190  T
Q  101 atttgactatctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatctatgtactcagaa 200  Q
    |||||||||||| | |||||| |||||||||||||||| || |||  | ||||| |||||||| | ||||||||||||||||||||| |||||||   ||    
T  27677191 atttgactatctttccaataagcttgtattcatatctattcatgtgcaataagataagttagtgtctaacaacatcacaatcacatccatgtact---aa 27677287  T
Q  201 tatattataaatttctaactatttcgacatataaataactaata 244  Q
    | ||||||| ||||||||||||||||||||||||||||||||||    
T  27677288 tgtattatacatttctaactatttcgacatataaataactaata 27677331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 287 - 499
Target Start/End: Complemental strand, 28786616 - 28786404
Alignment:
Q  287 aggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttgaaacctattt 386  Q
    |||||||  |||||||||||||||||||||||||||| |||||||||  |||||| | |||||||||||||||||||  ||||||||||||||||| |||    
T  28786616 aggactagaatggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaacctcttt 28786517  T
Q  387 tcatgctcagccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtct 486  Q
    |||||| ||||||||||||  ||||||| |||| ||||||||||||||||||| || || |||||||||||||||||||||||||||||||| | |||||    
T  28786516 tcatgcccagccaatgcttcaccataacgacctgtatgatgtcgcacattagtaggatcgacaccaaagaaaacaggcaaaacgaggcgaccttttgtct 28786417  T
Q  487 tgtagcactgaat 499  Q
    ||||||| |||||    
T  28786416 tgtagcaatgaat 28786404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 287 - 499
Target Start/End: Complemental strand, 28792737 - 28792525
Alignment:
Q  287 aggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttgaaacctattt 386  Q
    |||||||  |||||||||||||||||||||||||||| |||||||||  |||||| | |||||||||||||||||||  ||||||||||||||||| |||    
T  28792737 aggactagaatggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaacctcttt 28792638  T
Q  387 tcatgctcagccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtct 486  Q
    |||||| ||||||||||||  ||||||| |||| ||||||||||||||||||| || || |||||||||||||||||||||||||||||||| | |||||    
T  28792637 tcatgcccagccaatgcttcaccataacgacctgtatgatgtcgcacattagtaggatcgacaccaaagaaaacaggcaaaacgaggcgaccttttgtct 28792538  T
Q  487 tgtagcactgaat 499  Q
    ||||||| |||||    
T  28792537 tgtagcaatgaat 28792525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 296 - 499
Target Start/End: Complemental strand, 26884494 - 26884291
Alignment:
Q  296 atggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttgaaacctattttcatgctca 395  Q
    |||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||||||||||||||  ||||||||||||||||| |||||||| |||    
T  26884494 atggtagccggacaagttagcaacttgcctcatagccattttccatcgctgcaacctctccatgttatccttatcattttgaaaccttttttcatggtca 26884395  T
Q  396 gccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagcact 495  Q
    ||||||||||  |||||||||||| ||||||||||||||| ||| || ||||||||||  ||||||||||||||||||||||||| ||||| |||||| |    
T  26884394 gccaatgcttcaccataactacctgtatgatgtcgcacatcagtaggatccacaccaacaaaaacaggcaaaacgaggcgaccctttgtctcgtagcagt 26884295  T
Q  496 gaat 499  Q
    ||||    
T  26884294 gaat 26884291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 27717979 - 27718156
Alignment:
Q  10 agaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgacta 109  Q
    ||||| |||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  27717979 agaagcgatttcacttgttgtactcgagactgcaatccaacagggtaattggcaacatgtaagggttgacgactggtcttgttggagatgtatttgacta 27718078  T
Q  110 tctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatc 187  Q
    ||||| ||||||||| ||||||||||||| || |||| ||||||| |||||||||||| |||||||||||||||||||    
T  27718079 tctctccaataaactcgtattcatatctattcatgtccagtaagataagttagtatgtgacaacatcacaatcacatc 27718156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 287 - 499
Target Start/End: Complemental strand, 28781477 - 28781265
Alignment:
Q  287 aggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttgaaacctattt 386  Q
    |||||||  |||||||||||||||||||||||||||| |||||||||  |||||| | |||||||||||||||||||  ||||||||||||||||| |||    
T  28781477 aggactagaatggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaacctcttt 28781378  T
Q  387 tcatgctcagccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtct 486  Q
    |||||  ||||||||||||  ||||||  |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| | |||||    
T  28781377 tcatgtccagccaatgcttcaccataaggacctgtatgatgtcgcacattagtaggatccacaccaaagaaaacaggcaaaacgaggcgaccttttgtct 28781278  T
Q  487 tgtagcactgaat 499  Q
    ||||||| |||||    
T  28781277 tgtagcaatgaat 28781265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 296 - 499
Target Start/End: Original strand, 27427464 - 27427667
Alignment:
Q  296 atggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttgaaacctattttcatgctca 395  Q
    |||||||| || ||||||||||||  | |||||||||||||||||| ||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  27427464 atggtagctgggcaagttagcagccagactcagagccactttccattgctgcaacctctccatgtttttcgtatcattttgaaacctattttcatgctca 27427563  T
Q  396 gccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagcact 495  Q
    ||||||||||  ||||| |||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||  || |||||||| |    
T  27427564 gccaatgctttaccatacctacctgtatgatgtcgcacatcagtaggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagt 27427663  T
Q  496 gaat 499  Q
    ||||    
T  27427664 gaat 27427667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 10 - 192
Target Start/End: Original strand, 27610600 - 27610782
Alignment:
Q  10 agaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgacta 109  Q
    ||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27610600 agaagcgatttcacttcttgtacttgagactgcaatccaacagggtaattggcaacatgtaagggttgacgactgatcttgttggagatgtatttgacta 27610699  T
Q  110 tctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatctatgt 192  Q
    ||||| || |||||| ||||||||||||| || || | | ||||| |||||||||||| ||||||||||||||||||| ||||    
T  27610700 tctctccagtaaactcgtattcatatctattcatgcccaataagataagttagtatgtgacaacatcacaatcacatccatgt 27610782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 287 - 480
Target Start/End: Complemental strand, 26861951 - 26861758
Alignment:
Q  287 aggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttgaaacctattt 386  Q
    |||||||  ||||||||| |||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||   |||||||||||||||| |||    
T  26861951 aggactaaaatggtagcctgacaagttagcagcttggttcagagcaactttccatctctgcaacctctccatgttatccatatcattttgaaaccttttt 26861852  T
Q  387 tcatgctcagccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcgaccct 480  Q
    ||||||| |||||||||||  |||||| ||||| ||||||||||||||||||| || ||||  ||| |||||||||||||||||| ||||||||    
T  26861851 tcatgcttagccaatgcttcaccataaatacctctatgatgtcgcacattagtaggatccatgccatagaaaacaggcaaaacgacgcgaccct 26861758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 368 - 500
Target Start/End: Original strand, 27724775 - 27724907
Alignment:
Q  368 atcattttgaaacctattttcatgctcagccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaa 467  Q
    ||||||||||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||| ||||| |||||||| || |||||||||||||||    
T  27724775 atcattttgaaacctcttttcatgctcagccaatgcttcaccataactacctttctgatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaa 27724874  T
Q  468 acgaggcgaccctctgtcttgtagcactgaatt 500  Q
    ||||||||||||| |||||||||||| ||||||    
T  27724875 acgaggcgaccctttgtcttgtagcagtgaatt 27724907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 26623979 - 26623846
Alignment:
Q  4 ttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatt 103  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||||||||| || |||||||||||||||  |||| |||||||||||||||||||||    
T  26623979 ttatcaagaagtgatttcacttgttgtagttgagactgtaatccaacagggtatttagcaacatgtaagggcacacgattgatcttgttggagatgtatt 26623880  T
Q  104 tgactatctcttcaataaacttgtattcatatct 137  Q
    ||||||||| ||||||||| |  |||||||||||    
T  26623879 tgactatcttttcaataaaatcatattcatatct 26623846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 26729956 - 26729823
Alignment:
Q  4 ttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatt 103  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||||||||| || |||||||||||||||  |||| |||||||||||||||||||||    
T  26729956 ttatcaagaagtgatttcacttgttgtagttgagactgtaatccaacagggtatttagcaacatgtaagggcacacgattgatcttgttggagatgtatt 26729857  T
Q  104 tgactatctcttcaataaacttgtattcatatct 137  Q
    ||||||||| ||||||||| |  |||||||||||    
T  26729856 tgactatcttttcaataaaatcatattcatatct 26729823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 241 - 469
Target Start/End: Original strand, 27531003 - 27531228
Alignment:
Q  241 aatacaaaagggaaatataggatttaagtaaagttgggtaccgaggaggactatgatggtagccggacaagttagcagcttggctcagagccactttcca 340  Q
    |||| |||||||||| |||||||||||||||||| || |||| | |     ||| ||| | ||| ||||||||||| ||||||||||||||  |||||||    
T  27531003 aatataaaagggaaaaataggatttaagtaaagtgggctacccatgtt---tataatgctggccagacaagttagccgcttggctcagagcttctttcca 27531099  T
Q  341 tcgctgcaacctctccatgttatttttatcattttgaaacctattttcatgctcagccaatgcttggccataactacctttatgatgtcgcacattagtt 440  Q
    | |||||||||||||  ||||||  ||||||||||||||| | |||| |||| |||| |||||||  ||||| |||||| | ||||||||||||| |||     
T  27531100 ttgctgcaacctctcagtgttatccttatcattttgaaacttttttttatgcacagctaatgcttcaccatatctacctgtgtgatgtcgcacatcagta 27531199  T
Q  441 ggttccacaccaaagaaaacaggcaaaac 469  Q
    || ||||||||||  ||||||||||||||    
T  27531200 ggatccacaccaataaaaacaggcaaaac 27531228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 31285267 - 31285134
Alignment:
Q  4 ttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatt 103  Q
    ||||| |||||  ||||||||| ||||| | || |||  |||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  31285267 ttatcaagaagcaatttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatgtaagggcacacgattgatcttgttggagatgtatt 31285168  T
Q  104 tgactatctcttcaataaacttgtattcatatct 137  Q
    ||||||| ||| ||||||| |  |||||||||||    
T  31285167 tgactatgtctccaataaaatcatattcatatct 31285134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 18 - 165
Target Start/End: Original strand, 27530789 - 27530936
Alignment:
Q  18 tttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatctcttca 117  Q
    |||||| | ||||||| | ||||||||||||||||| || |||||||||| |||||||| |||||| ||| ||||||| |||| || |||||||| | ||    
T  27530789 tttcacatgttgtactcgggactgtaatccaacaggatatttggcaacatctaagggctcacgactaatcctgttggaaatgtcttcgactatctttcca 27530888  T
Q  118 ataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtat 165  Q
    ||||||| ||||||||||||| || |||| | ||||| ||||||||||    
T  27530889 ataaactcgtattcatatctattcatgtccaataagataagttagtat 27530936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 26647189 - 26646951
Alignment:
Q  2 ctttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgta 101  Q
    ||||||| |||||  ||||||||| || || | | |||| ||||||||||||||| ||||| ||||||||      |||| ||||||||||||||||||     
T  26647189 ctttatcaagaagcaatttcacttgttctaatcgggactctaatccaacagggtatttggctacatgtaaaatgacacgattgatcttgttggagatgtc 26647090  T
Q  102 tttgactatctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagt--atgtaacaacatcacaatcacatctatgtactcaga 199  Q
    || ||||||||   ||||||||||||||||||||||| || ||||    |||| ||||||||  ||| | |||||||||||  ||||  ||||||  |||    
T  26647089 ttcgactatcttcccaataaacttgtattcatatctattcatgtcccacaagataagttagtacatgcaccaacatcacaaatacattgatgtaccgaga 26646990  T
Q  200 atatattataaatttctaactatttcgacatataaataa 238  Q
    |||||||||| | |||||||| ||| |||||||||||||    
T  26646989 atatattatacagttctaactcttttgacatataaataa 26646951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 26753157 - 26752919
Alignment:
Q  2 ctttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgta 101  Q
    ||||||| |||||  ||||||||| || || | | |||| ||||||||||||||| ||||| ||||||||      |||| ||||||||||||||||||     
T  26753157 ctttatcaagaagcaatttcacttgttctaatcgggactctaatccaacagggtatttggctacatgtaaaatgacacgattgatcttgttggagatgtc 26753058  T
Q  102 tttgactatctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagt--atgtaacaacatcacaatcacatctatgtactcaga 199  Q
    || ||||||||   ||||||||||||||||||||||| || ||||    |||| ||||||||  ||| | |||||||||||  ||||  ||||||  |||    
T  26753057 ttcgactatcttcccaataaacttgtattcatatctattcatgtcccacaagataagttagtacatgcaccaacatcacaaatacattgatgtaccgaga 26752958  T
Q  200 atatattataaatttctaactatttcgacatataaataa 238  Q
    |||||||||| | |||||||| ||| |||||||||||||    
T  26752957 atatattatacagttctaactcttttgacatataaataa 26752919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 26656673 - 26656539
Alignment:
Q  4 ttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatt 103  Q
    ||||| |||||  ||||||||| ||||||| |||||| ||||||||||||||| ||||||||||||||      |||| ||||||||| |||||||| ||    
T  26656673 ttatcaagaagcaatttcacttgttgtactcgagactctaatccaacagggtatttggcaacatgtaaaaaaacacgattgatcttgtcggagatgtctt 26656574  T
Q  104 tgactatctcttcaataaacttgtattcatatcta 138  Q
    ||||||| |  ||||||||||||||||||||||||    
T  26656573 tgactatattctcaataaacttgtattcatatcta 26656539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 26762644 - 26762510
Alignment:
Q  4 ttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatt 103  Q
    ||||| |||||  ||||||||| ||||||| |||||| ||||||||||||||| ||||||||||||||      |||| ||||||||| |||||||| ||    
T  26762644 ttatcaagaagcaatttcacttgttgtactcgagactctaatccaacagggtatttggcaacatgtaaaaaaacacgattgatcttgtcggagatgtctt 26762545  T
Q  104 tgactatctcttcaataaacttgtattcatatcta 138  Q
    ||||||| |  ||||||||||||||||||||||||    
T  26762544 tgactatattctcaataaacttgtattcatatcta 26762510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 295 - 478
Target Start/End: Complemental strand, 31284618 - 31284435
Alignment:
Q  295 gatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttgaaacctattttcatgctc 394  Q
    |||||| ||| ||||||||||| |||||  | ||||| |  ||||||   |||||||| ||||| | || | ||| || ||| ||||| | ||||||||     
T  31284618 gatggtcgccagacaagttagctgcttgagtaagagctatcttccatttttgcaacctttccatatgatctgtattatgttggaacctctcttcatgctt 31284519  T
Q  395 agccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcgacc 478  Q
    |||||||||||  |||||||||||| ||||||||||||||| ||  || ||||| ||||||||||| |||||||||||||||||    
T  31284518 agccaatgcttctccataactacctctatgatgtcgcacatgagaaggatccacgccaaagaaaacgggcaaaacgaggcgacc 31284435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 37 - 240
Target Start/End: Complemental strand, 25539218 - 25539013
Alignment:
Q  37 gactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatctcttcaataaacttgtattcatatc 136  Q
    |||||||||||||||||||| ||||| |||| |||      | || |||| ||||||||||||| || ||||||||  ||||||||||||||||||||||    
T  25539218 gactgtaatccaacagggtatttggccacatataaaaaaacatgattgatattgttggagatgtcttcgactatcttctcaataaacttgtattcatatc 25539119  T
Q  137 tactcgtgtcgagtaagaaaagttagtatgtaa--caacatcacaatcacatctatgtactcagaatatattataaatttctaactatttcgacatataa 234  Q
    || || |||| | ||||| ||||||| |  |||   || |||| ||||||||| ||||| | ||||||||||||  | |||||| | ||| |||||||||    
T  25539118 tattcatgtccaataagataagttagaacataaactaaaatcaaaatcacatccatgtattgagaatatattatgcaattctaatttttttgacatataa 25539019  T
Q  235 ataact 240  Q
    ||||||    
T  25539018 ataact 25539013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 37 - 240
Target Start/End: Complemental strand, 26143543 - 26143338
Alignment:
Q  37 gactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatctcttcaataaacttgtattcatatc 136  Q
    |||||||||||||||||||| ||||| |||| |||      | || |||| ||||||||||||| || ||||||||  ||||||||||||||||||||||    
T  26143543 gactgtaatccaacagggtatttggctacatttaaaaaaacatgattgatattgttggagatgtcttcgactatcttctcaataaacttgtattcatatc 26143444  T
Q  137 tactcgtgtcgagtaagaaaagttagtatgta-ac-aacatcacaatcacatctatgtactcagaatatattataaatttctaactatttcgacatataa 234  Q
    || || |||| | ||||| || |||| |  || || || |||| ||||||||| ||||| | ||||||||||||  | |||||||| ||| |||||||||    
T  26143443 tattcatgtccaataagataaattagaaaatacactaaaatcaaaatcacatccatgtattgagaatatattatgcaattctaacttttttgacatataa 26143344  T
Q  235 ataact 240  Q
    ||||||    
T  26143343 ataact 26143338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 261 - 393
Target Start/End: Complemental strand, 25538904 - 25538772
Alignment:
Q  261 gatttaagtaaagttgggtaccgaggaggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgt 360  Q
    |||||||||||||| ||||||| | ||||||||| ||| |||||||||||||||||||||||| | ||||| |  |||||| |  |||| | ||||||||    
T  25538904 gatttaagtaaagtggggtacccatgaggactataatgatagccggacaagttagcagcttggataagagctatcttccattgacgcaatcgctccatgt 25538805  T
Q  361 tatttttatcattttgaaacctattttcatgct 393  Q
    | || | || |||||||||||| | ||||||||    
T  25538804 ttttctcattattttgaaacctctcttcatgct 25538772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 25580351 - 25580272
Alignment:
Q  83 tgatcttgttggagatgtatttgactatctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttag 162  Q
    |||| ||||||||||||| || ||||||||  |||||||||||||||||||||||| ||||||| | ||||| |||||||    
T  25580351 tgatattgttggagatgtcttcgactatcttctcaataaacttgtattcatatctattcgtgtccaataagataagttag 25580272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 263 - 393
Target Start/End: Complemental strand, 25580081 - 25579951
Alignment:
Q  263 tttaagtaaagttgggtaccgaggaggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgtta 362  Q
    |||||||||||| ||||||| | ||||||||| ||| |||||||||||||||||||||||| | ||||| |  |||||| |  |||| | |||||||||     
T  25580081 tttaagtaaagtggggtacccatgaggactataatgatagccggacaagttagcagcttgggtaagagctatcttccattgacgcaatcgctccatgttt 25579982  T
Q  363 tttttatcattttgaaacctattttcatgct 393  Q
    || |  | |||||||||||| | ||||||||    
T  25579981 ttctcgttattttgaaacctctcttcatgct 25579951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 263 - 393
Target Start/End: Complemental strand, 26143227 - 26143097
Alignment:
Q  263 tttaagtaaagttgggtaccgaggaggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgtta 362  Q
    |||||||||||| ||||||| | ||||||||| ||| |||||||||||||||||||||||| | ||||| |  |||||| |  |||| | |||||||||     
T  26143227 tttaagtaaagtggggtacccatgaggactataatgatagccggacaagttagcagcttggataagagctatcttccattgacgcaatcgctccatgttt 26143128  T
Q  363 tttttatcattttgaaacctattttcatgct 393  Q
    || |  | |||||||||||| | ||||||||    
T  26143127 ttctcgttattttgaaacctctcttcatgct 26143097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 162
Target Start/End: Complemental strand, 25483734 - 25483609
Alignment:
Q  37 gactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatctcttcaataaacttgtattcatatc 136  Q
    |||||||||||||||||||| ||||| || | |||    | | || |||| |||||||||||||||| ||||||||  ||||||||||||| ||||||||    
T  25483734 gactgtaatccaacagggtatttggctacgtttaaaaaatcatgattgatattgttggagatgtattggactatcttctcaataaacttgtgttcatatc 25483635  T
Q  137 tactcgtgtcgagtaagaaaagttag 162  Q
    || || |||| | ||||| |||||||    
T  25483634 tattcatgtccaataagataagttag 25483609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 26824527 - 26824460
Alignment:
Q  4 ttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaa 71  Q
    ||||| ||||| |||||||||| ||||||| | |||||||||||||| ||||| ||||||||||||||    
T  26824527 ttatcaagaagagatttcacttgttgtactcgggactgtaatccaaccgggtatttggcaacatgtaa 26824460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 26056290 - 26056229
Alignment:
Q  261 gatttaagtaaagttgggtaccgaggaggactatgatggtagccggacaagttagcagcttg 322  Q
    |||||||||||||| ||||||  | ||||||||| ||| |||||||||||||||||||||||    
T  26056290 gatttaagtaaagtagggtactcatgaggactataatgatagccggacaagttagcagcttg 26056229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 26076260 - 26076199
Alignment:
Q  261 gatttaagtaaagttgggtaccgaggaggactatgatggtagccggacaagttagcagcttg 322  Q
    |||||||||||||| ||||||  | ||||||||| ||| |||||||||||||||||||||||    
T  26076260 gatttaagtaaagtagggtactcatgaggactataatgatagccggacaagttagcagcttg 26076199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 26646838 - 26646771
Alignment:
Q  263 tttaagtaaagttgggtaccgaggaggactatgatggtagccggacaagttagcagcttggctcagagcca 333  Q
    |||||||||||| ||||||| ||||   |||| |||||| ||||||||||||||||||||| |||||||||    
T  26646838 tttaagtaaagtggggtacccagga---ctataatggtatccggacaagttagcagcttgggtcagagcca 26646771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 26752806 - 26752739
Alignment:
Q  263 tttaagtaaagttgggtaccgaggaggactatgatggtagccggacaagttagcagcttggctcagagcca 333  Q
    |||||||||||| ||||||| ||||   |||| |||||| ||||||||||||||||||||| |||||||||    
T  26752806 tttaagtaaagtggggtacccagga---ctataatggtatccggacaagttagcagcttgggtcagagcca 26752739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 25511567 - 25511512
Alignment:
Q  83 tgatcttgttggagatgtatttgactatctcttcaataaacttgtattcatatcta 138  Q
    |||||||||||||||||| || ||||||||  |||||||||||||||||| |||||    
T  25511567 tgatcttgttggagatgtcttcgactatcttctcaataaacttgtattcagatcta 25511512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 499
Target Start/End: Complemental strand, 25482104 - 25481868
Alignment:
Q  263 tttaagtaaagttgggtaccgaggaggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgtta 362  Q
    |||||||||||| ||||||  | ||||||||| ||| ||||||||||| |||||||||||  | |||||||  |||||| |  |||| | |||||||||     
T  25482104 tttaagtaaagtggggtactcatgaggactataatgatagccggacaaattagcagcttgagtaagagccatcttccattgacgcaatcgctccatgttt 25482005  T
Q  363 tttttatcattttgaaacctattttcatgctcagccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacag 462  Q
    || |  | |||||| ||||  | |||||||| || ||    ||  |||||||||| | ||||| |||| |||| ||| || ||||||||| ||||||| |    
T  25482004 ttctcgttattttggaacccctcttcatgcttagtcagatattcaccataactacatgtatgacgtcgaacatcagtaggatccacaccatagaaaacgg 25481905  T
Q  463 gcaaaacgaggcgaccctctgtcttgtagcactgaat 499  Q
    | || || | || || || |||||||||||| |||||    
T  25481904 gtaatactaagcaactctttgtcttgtagcagtgaat 25481868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 499
Target Start/End: Complemental strand, 26646660 - 26646605
Alignment:
Q  444 tccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagcactgaat 499  Q
    ||||| ||| ||||||| ||||||||||| ||||||| |||||||||||| |||||    
T  26646660 tccacgccatagaaaacgggcaaaacgagacgaccctttgtcttgtagcaatgaat 26646605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 499
Target Start/End: Complemental strand, 26752628 - 26752573
Alignment:
Q  444 tccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagcactgaat 499  Q
    ||||| ||| ||||||| ||||||||||| ||||||| |||||||||||| |||||    
T  26752628 tccacgccatagaaaacgggcaaaacgagacgaccctttgtcttgtagcaatgaat 26752573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 25492806 - 25492860
Alignment:
Q  17 atttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaa 71  Q
    ||||||| | ||||||| | || ||||||||||||||||| ||||||||||||||    
T  25492806 atttcacgtgttgtactcgggattgtaatccaacagggtatttggcaacatgtaa 25492860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 393
Target Start/End: Complemental strand, 27214758 - 27214652
Alignment:
Q  287 aggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttgaaacctattt 386  Q
    |||||||| ||| ||||| || ||||||||||||||| | ||||| |  ||||||  |||||||| ||||||||| |  || | |||||||||||| | |    
T  27214758 aggactataatgatagccagataagttagcagcttggttaagagctatcttccatttctgcaaccgctccatgttttccttgttattttgaaacctctct 27214659  T
Q  387 tcatgct 393  Q
    |||||||    
T  27214658 tcatgct 27214652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 27234470 - 27234576
Alignment:
Q  287 aggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttgaaacctattt 386  Q
    |||||||| ||| ||||| || ||||||||||||||| | ||||| |  ||||||  |||||||| ||||||||| |  || | |||||||||||| | |    
T  27234470 aggactataatgatagccagataagttagcagcttggttaagagctatcttccatttctgcaaccgctccatgttttccttgttattttgaaacctctct 27234569  T
Q  387 tcatgct 393  Q
    |||||||    
T  27234570 tcatgct 27234576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 28297256 - 28297346
Alignment:
Q  46 ccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatctcttcaataaacttgtattcatatc 136  Q
    ||||| ||||||| |||||||| ||| ||   |||| |||||||| |||| | ||||||||||||||  ||||||||||  ||||||||||    
T  28297256 ccaacggggtaatcggcaacatataaaggaacacgattgatcttgctggatacgtatttgactatcttctcaataaactcatattcatatc 28297346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 28514817 - 28514727
Alignment:
Q  46 ccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatctcttcaataaacttgtattcatatc 136  Q
    ||||| ||||||| |||||||| ||| ||   |||| |||||||| |||| | ||||||||||||||  ||||||||||  ||||||||||    
T  28514817 ccaacggggtaatcggcaacatataaaggaacacgattgatcttgctggatacgtatttgactatcttctcaataaactcatattcatatc 28514727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 27337582 - 27337635
Alignment:
Q  17 atttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgta 70  Q
    |||| |||| ||||||| | |||||||||||||||||||| |||||||| ||||    
T  27337582 attttacttgttgtactcgggactgtaatccaacagggtatttggcaacgtgta 27337635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 361
Target Start/End: Original strand, 27337923 - 27337988
Alignment:
Q  296 atggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgtt 361  Q
    ||||| |||||| ||||||||||||||| | |||||||  ||||||  || |||||||||||||||    
T  27337923 atggtggccggagaagttagcagcttgggtaagagccatcttccatttcttcaacctctccatgtt 27337988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 27398322 - 27398375
Alignment:
Q  17 atttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgta 70  Q
    |||| |||| ||||||| | |||||||||||||||||||| |||||||| ||||    
T  27398322 attttacttgttgtactcgggactgtaatccaacagggtatttggcaacgtgta 27398375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 361
Target Start/End: Original strand, 27398663 - 27398728
Alignment:
Q  296 atggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgtt 361  Q
    ||||| |||||| ||||||||||||||| | |||||||  ||||||  || |||||||||||||||    
T  27398663 atggtggccggagaagttagcagcttgggtaagagccatcttccatttcttcaacctctccatgtt 27398728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 26824021 - 26823985
Alignment:
Q  444 tccacaccaaagaaaacaggcaaaacgaggcgaccct 480  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  26824021 tccacaccatagaaaacaggcaaaacgaggcgcccct 26823985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 27664758 - 27664810
Alignment:
Q  83 tgatcttgttggagatgtatttgactatctcttcaataaacttgtattcatat 135  Q
    ||||||||||||||| || | | ||||| ||||||||||| ||||||||||||    
T  27664758 tgatcttgttggagacgtctgtaactatttcttcaataaatttgtattcatat 27664810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 28227618 - 28227530
Alignment:
Q  46 ccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatctcttcaataaacttgtattcata 134  Q
    ||||||||||||| |||||||||||| ||   | || |||||||||| || || |||||||||||||  || ||||||| | |||||||    
T  28227618 ccaacagggtaatcggcaacatgtaaaggaacatgattgatcttgttagatatatatttgactatcttctcgataaactcgcattcata 28227530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 28234861 - 28234713
Alignment:
Q  327 agagccactttccatcgctgcaacctctccatgttatttttatcattttgaaacctattttcatgctcagccaatgcttggccataactacctttatgat 426  Q
    |||||||  ||||||  ||||||||||||||||||||  || | |||||| ||| | |||  ||| ||| ||| |||||  |||||||| || || ||||    
T  28234861 agagccatcttccatttctgcaacctctccatgttatccttgttattttggaacttctttatatgatcatccagtgctttaccataactgcccttgtgat 28234762  T
Q  427 gtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcg 475  Q
    ||||||| | ||  ||||||||| || ||||||  |||||||| |||||    
T  28234761 gtcgcacgtgagaaggttccacatcatagaaaattggcaaaactaggcg 28234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 155; Significance: 5e-82; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 8198 - 7968
Alignment:
Q  1 cctttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgt 100  Q
    |||| ||| ||||| |||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8198 ccttcatcaagaagcgatttcacatgttgtactcgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgt 8099  T
Q  101 atttgactatctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatctatgtactcagaa 200  Q
    |||||||||| ||  ||||||||||||||||||||||| || ||||   ||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  8098 atttgactatatcgccaataaacttgtattcatatctattcatgtcatataagataagttagtatgtaacaacatcacaatcacatccatgtactcagaa 7999  T
Q  201 tatattataaatttctaactatttcgacata 231  Q
    |||| |||| |||||||||||||| ||||||    
T  7998 tatagtatacatttctaactattttgacata 7968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 296 - 499
Target Start/End: Complemental strand, 7854 - 7651
Alignment:
Q  296 atggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttgaaacctattttcatgctca 395  Q
    |||||||||||||||||||||||||||| |||||||||  |||||| | ||||| | |||||||||||| ||||||||||||||||| ||||||||  ||    
T  7854 atggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaatcgctccatgttattcttatcattttgaaacctcttttcatgtcca 7755  T
Q  396 gccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagcact 495  Q
    ||||||||||  ||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  7754 gccaatgcttcaccataacgacctgtatgatgtcgcacattagtaggatccacaccaaagaaaacaggcaaaacgaggcgaccttctgtcttgtagcaat 7655  T
Q  496 gaat 499  Q
    ||||    
T  7654 gaat 7651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 155; Significance: 5e-82; HSPs: 4)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 13146 - 13376
Alignment:
Q  1 cctttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgt 100  Q
    |||| ||| ||||| |||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13146 ccttcatcaagaagcgatttcacatgttgtactcgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgt 13245  T
Q  101 atttgactatctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatctatgtactcagaa 200  Q
    |||||||||| ||  ||||||||||||||||||||||| || ||||   ||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  13246 atttgactatatcgccaataaacttgtattcatatctattcatgtcatataagataagttagtatgtaacaacatcacaatcacatccatgtactcagaa 13345  T
Q  201 tatattataaatttctaactatttcgacata 231  Q
    |||| |||| |||||||||||||| ||||||    
T  13346 tatagtatacatttctaactattttgacata 13376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 296 - 500
Target Start/End: Original strand, 4529 - 4733
Alignment:
Q  296 atggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttgaaacctattttcatgctca 395  Q
    |||||||||||||||||||||||||||| |||||||||  |||||| | |||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  4529 atggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttattcttatcattttgaaacctcttttcatgctca 4628  T
Q  396 gccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagcact 495  Q
    ||||||||||  ||||||||||||||  |||||||||| ||||| |||||||| || |||||||||||||||||||||||||||| |||||||||||| |    
T  4629 gccaatgcttcaccataactacctttcagatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacgaggcgaccctttgtcttgtagcagt 4728  T
Q  496 gaatt 500  Q
    |||||    
T  4729 gaatt 4733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 4183 - 4407
Alignment:
Q  1 cctttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgt 100  Q
    |||| ||| ||||| |||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4183 ccttcatcaagaagcgatttcacatgttgtactcgagactgtaatccaacagggtaattggcaacatgtaagggctgatgactgatcttgttggagatgt 4282  T
Q  101 atttgactatctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatctatgtactcagaa 200  Q
      |||||||||||| ||||||||||||||||||||||| |  ||||   ||||| |||||||||||||||||||||||||||||||| ||||||||| ||    
T  4283 tcttgactatctctccaataaacttgtattcatatctattaatgtccgataagataagttagtatgtaacaacatcacaatcacatccatgtactcataa 4382  T
Q  201 tatat--tataaatttctaactatt 223  Q
    |||||  |||| |||||||||||||    
T  4383 tatatggtatacatttctaactatt 4407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 296 - 499
Target Start/End: Original strand, 13490 - 13693
Alignment:
Q  296 atggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttgaaacctattttcatgctca 395  Q
    |||||||||||||||||||||||||||| |||||||||  |||||| | ||||| | |||||||||||| ||||||||||||||||| ||||||||  ||    
T  13490 atggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaatcgctccatgttattcttatcattttgaaacctcttttcatgtcca 13589  T
Q  396 gccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagcact 495  Q
    ||||||||||  ||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| | |||||||||||| |    
T  13590 gccaatgcttcaccataacgacctgtatgatgtcgcacattagtaggatccacaccaaagaaaacaggcaaaacgaggcgaccttttgtcttgtagcaat 13689  T
Q  496 gaat 499  Q
    ||||    
T  13690 gaat 13693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 152; Significance: 3e-80; HSPs: 4)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 277 - 499
Target Start/End: Original strand, 3259 - 3482
Alignment:
Q  277 ggtaccgaggaggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttattttt-atcatttt 375  Q
    |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||   ||||||||    
T  3259 ggtacccaggaggactatcatggtagccggacaagttagcagcctggctcagagccactttccatcgctgcaacctctccatgttttttcggatcatttt 3358  T
Q  376 gaaacctattttcatgctcagccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcg 475  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||||| ||||||||||| |||| |||||||||||||| |||||||||| |||||||||    
T  3359 gaaacctcttttcatgctcagccaatgcttcaccataactacctttacgatgtcgcacaatagtaggttccacaccaaataaaacaggcagaacgaggcg 3458  T
Q  476 accctctgtcttgtagcactgaat 499  Q
    ||||| |||||||||||| |||||    
T  3459 accctttgtcttgtagcagtgaat 3482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 277 - 500
Target Start/End: Original strand, 14195 - 14418
Alignment:
Q  277 ggtaccgaggaggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttg 376  Q
    |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| ||   |||||||||    
T  14195 ggtacccaggaggactatcatggtagccggacaagttagcagcctggctcagagcctctttccatccctgcaacctctccatgtttttcggatcattttg 14294  T
Q  377 aaacctattttcatgctcagccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcga 476  Q
    |||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||| ||||| |||||||| || ||||||||||||||||||||||||    
T  14295 aaacctcttttcatgctcagccaatgcttcaccataactacctttctgatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacgaggcga 14394  T
Q  477 ccctctgtcttgtagcactgaatt 500  Q
    |||| |||||||||||| ||||||    
T  14395 ccctttgtcttgtagcagtgaatt 14418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 10 - 187
Target Start/End: Original strand, 3019 - 3196
Alignment:
Q  10 agaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgacta 109  Q
    ||||| |||||||||| ||||||| ||||||  | |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  3019 agaagcgatttcacttgttgtactcgagacttcattccaacagggtaattggcaacatgtaagggttgacgactggtcttgttggagatgtatttgacta 3118  T
Q  110 tctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatc 187  Q
    ||||| ||||||||| ||||||||||||| || |||| ||||||| |||||||||||| |||||||||||||||||||    
T  3119 tctctccaataaactcgtattcatatctattcatgtccagtaagataagttagtatgtgacaacatcacaatcacatc 3196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 14093 - 14135
Alignment:
Q  150 taagaaaagttagtatgtaacaacatcacaatcacatctatgt 192  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||    
T  14093 taagataagttagtatgtgacaacatcacaatcacatccatgt 14135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 149; Significance: 2e-78; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 18730971 - 18731215
Alignment:
Q  1 cctttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgt 100  Q
    |||||||| ||||| |||||||||| ||||||| ||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||  |    
T  18730971 cctttatcaagaagcgatttcacttgttgtactcgagactgcaacccaacagggtaaatggcaacatgtaagggctgacgactgatcttgttggagacat 18731070  T
Q  101 atttgactatctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatctatgtactcagaa 200  Q
    |||||||||||| ||||||||||||||||||||||||| || |||| | ||||| |||| ||||||||||||||||||| ||||||| |||| |||| ||    
T  18731071 atttgactatcttttcaataaacttgtattcatatctattcatgtccaataagataagtcagtatgtaacaacatcacagtcacatccatgtcctcataa 18731170  T
Q  201 tatattataaatttctaactatttcgacatataaataactaatac 245  Q
    ||||| ||| |||||||||||||| ||| ||||||||||||||||    
T  18731171 tatatcatacatttctaactattttgacttataaataactaatac 18731215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 18698867 - 18699111
Alignment:
Q  1 cctttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgt 100  Q
    |||||||| ||||| | |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  18698867 cctttatcaagaagcgctttcacttgttgtactcgagactgcaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagacgt 18698966  T
Q  101 atttgactatctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatctatgtactcagaa 200  Q
    |||||||||| ||| ||||||||||||||||||||||| || |||| | ||||| || | ||| ||||||||||||||| ||||||| |||| |||| |     
T  18698967 atttgactatatctccaataaacttgtattcatatctattcatgtccaataagataaatcagtgtgtaacaacatcacagtcacatccatgtcctcatag 18699066  T
Q  201 tatattataaatttctaactatttcgacatataaataactaatac 245  Q
    ||||| ||| |||||||||||||| ||| ||||||||||||||||    
T  18699067 tatatcatacatttctaactattttgacttataaataactaatac 18699111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 18723552 - 18723796
Alignment:
Q  1 cctttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgt 100  Q
    |||||||| ||||| |||||||||| ||||||| ||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||  ||  |    
T  18723552 cctttatcaagaagcgatttcacttgttgtactcgagactgcaacccaacagggtaagtggcaacatgtaagggctgacgactgatcttgttgttgacat 18723651  T
Q  101 atttgactatctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatctatgtactcagaa 200  Q
    |||||||||||| | ||||||||||||||||||||||| || |||| | ||||| |||| ||||||||||||||||||| ||||||| || |||||| ||    
T  18723652 atttgactatctttccaataaacttgtattcatatctattcatgtccaataagataagtcagtatgtaacaacatcacagtcacatccatttactcataa 18723751  T
Q  201 tatattataaatttctaactatttcgacatataaataactaatac 245  Q
    ||||| ||| |||||||||||||| ||| ||||||||||||||||    
T  18723752 tatatcatacatttctaactattttgacttataaataactaatac 18723796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 10 - 242
Target Start/End: Complemental strand, 18074463 - 18074229
Alignment:
Q  10 agaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgacta 109  Q
    ||||| |||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  18074463 agaagcgatttcacttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaaggactgtcgactgatcttgttggagatgtatttgacta 18074364  T
Q  110 tctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacat--cacaatcacatctatgtactcagaatatatta 207  Q
    ||| | |||||| || ||||||||||||| || |||| | ||| | ||||||||||||||||||||  |||||||||||| ||||||||| |||||||||    
T  18074363 tctttccaataagctcgtattcatatctattcatgtccaataatataagttagtatgtaacaacatcacacaatcacatccatgtactcataatatatta 18074264  T
Q  208 taaatttctaactatttcgacatataaataactaa 242  Q
    || |||| ||||||||| |||||||||||||||||    
T  18074263 tacatttttaactattttgacatataaataactaa 18074229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 18654944 - 18655188
Alignment:
Q  1 cctttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgt 100  Q
    |||||||| ||||| |||||||||| ||||||| ||||||| || |||||||||||| ||||| |||||||||||||||||||||||||||||||||  |    
T  18654944 cctttatcaagaagcgatttcacttgttgtactcgagactgcaacccaacagggtaactggcagcatgtaagggctgacgactgatcttgttggagacat 18655043  T
Q  101 atttgactatctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatctatgtactcagaa 200  Q
    |||||||||||| | ||||||||||||||||||||||| || |||| | ||||| || | ||| ||||||||||||||| ||||||| || |||||| ||    
T  18655044 atttgactatctttccaataaacttgtattcatatctattcatgtccaataagataaatcagtgtgtaacaacatcacagtcacatccatttactcataa 18655143  T
Q  201 tatattataaatttctaactatttcgacatataaataactaatac 245  Q
    ||||| ||| |||||||||||||| ||| ||||||||||||||||    
T  18655144 tatatcatacatttctaactattttgacttataaataactaatac 18655188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 10 - 218
Target Start/End: Original strand, 18679036 - 18679244
Alignment:
Q  10 agaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgacta 109  Q
    ||||| |||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||    
T  18679036 agaagcgatttcacttgttgtactcgagactgcaatccaacagggtaattggcaacatgtaagggctgccgactgatcttgttagagacgtatttgacta 18679135  T
Q  110 tctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacatcacaatcacatctatgtactcagaatatattata 209  Q
    ||||| ||||||||||||||||||||||| || |||| | ||||| |||| ||||||||||||||||||| ||||| | ||||||||| ||||||| |||    
T  18679136 tctctccaataaacttgtattcatatctattcatgtccaataagataagtcagtatgtaacaacatcacagtcacacccatgtactcataatatatcata 18679235  T
Q  210 aatttctaa 218  Q
     ||||||||    
T  18679236 catttctaa 18679244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 296 - 499
Target Start/End: Complemental strand, 18074091 - 18073888
Alignment:
Q  296 atggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttgaaacctattttcatgctca 395  Q
    |||||||| || ||||||||||||  | |||||||||||||||||| ||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  18074091 atggtagctgggcaagttagcagccagactcagagccactttccattgctgcaacctctccatgtttttcgtatcattttgaaacctattttcatgctca 18073992  T
Q  396 gccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagcact 495  Q
    ||||||||||  ||||| |||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||  || |||||||| |    
T  18073991 gccaatgctttaccatacctacctgtatgatgtcgcacatcagtaggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagt 18073892  T
Q  496 gaat 499  Q
    ||||    
T  18073891 gaat 18073888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 18655313 - 18655387
Alignment:
Q  287 aggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgtt 361  Q
    |||||||  |||||||||||||||||||||||||| | |||||||||  |||||| | ||||||| |||||||||    
T  18655313 aggactagaatggtagccggacaagttagcagcttcggtcagagccaacttccattgatgcaaccgctccatgtt 18655387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 18723921 - 18723995
Alignment:
Q  287 aggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgtt 361  Q
    |||||||  |||||||||||||||||||||||||| | |||||||||  |||||| | ||||||| |||||||||    
T  18723921 aggactaaaatggtagccggacaagttagcagcttcggtcagagccaacttccattgatgcaaccgctccatgtt 18723995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 361
Target Start/End: Original strand, 18731349 - 18731414
Alignment:
Q  296 atggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgtt 361  Q
    |||||||||||||||||||||||||| | |||||||||  |||||| | ||||||| |||||||||    
T  18731349 atggtagccggacaagttagcagcttcggtcagagccaacttccattgatgcaaccgctccatgtt 18731414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 473
Target Start/End: Original strand, 17989013 - 17989078
Alignment:
Q  408 ccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaac-aggcaaaacgagg 473  Q
    ||||| |||||| ||||||||||||||| ||  |||||||||||||||||||| |||||||||||||    
T  17989013 ccatacctacctgtatgatgtcgcacatcaga-ggttccacaccaaagaaaacaaggcaaaacgagg 17989078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 18679403 - 18679477
Alignment:
Q  287 aggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgtt 361  Q
    |||||||  |||||||||||||||||||||||||| | ||||||| |  |||||| | ||||||| |||||||||    
T  18679403 aggactaaaatggtagccggacaagttagcagcttcggtcagagctaacttccattgatgcaaccgctccatgtt 18679477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 296 - 361
Target Start/End: Original strand, 18699245 - 18699310
Alignment:
Q  296 atggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgtt 361  Q
    |||||||||||||||||||||||||| | ||||||| |  |||||| | ||||||| |||||||||    
T  18699245 atggtagccggacaagttagcagcttcggtcagagctaacttccattgatgcaaccgctccatgtt 18699310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 499
Target Start/End: Original strand, 18655470 - 18655525
Alignment:
Q  444 tccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagcactgaat 499  Q
    ||||| ||| |||||||||| |||||||| ||||||| |||||||||||| |||||    
T  18655470 tccacgccatagaaaacaggaaaaacgagacgaccctttgtcttgtagcagtgaat 18655525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 499
Target Start/End: Original strand, 18679570 - 18679615
Alignment:
Q  454 agaaaacaggcaaaacgaggcgaccctctgtcttgtagcactgaat 499  Q
    |||||||||||||||| || ||||||| |||||||||||| |||||    
T  18679570 agaaaacaggcaaaacaagacgaccctttgtcttgtagcagtgaat 18679615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 499
Target Start/End: Original strand, 18699399 - 18699448
Alignment:
Q  450 ccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagcactgaat 499  Q
    ||| ||||||||||||||||||| ||||| | |||||||||||| |||||    
T  18699399 ccatagaaaacaggcaaaacgagacgaccttttgtcttgtagcagtgaat 18699448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 493
Target Start/End: Original strand, 18724078 - 18724127
Alignment:
Q  444 tccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagca 493  Q
    ||||| ||| |||||||||||||||| || ||||||| ||||||||||||    
T  18724078 tccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagca 18724127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 493
Target Start/End: Original strand, 18731497 - 18731546
Alignment:
Q  444 tccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagca 493  Q
    ||||| ||| |||||||||||||||| || ||||||| ||||||||||||    
T  18731497 tccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagca 18731546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 474
Target Start/End: Original strand, 5090902 - 5090990
Alignment:
Q  386 ttcatgctcagccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggc 474  Q
    |||||||||||| | |||||  |||||||| ||  | |||| |||||||| ||  |||||||||||| |||||| ||||||||| ||||    
T  5090902 ttcatgctcagcaagtgcttcaccataacttccagtctgatatcgcacatgagaaggttccacaccatagaaaataggcaaaaccaggc 5090990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 136; Significance: 1e-70; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 10 - 242
Target Start/End: Complemental strand, 60271 - 60037
Alignment:
Q  10 agaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgacta 109  Q
    ||||| |||||||||| ||||||| ||||||| ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  60271 agaagcgatttcacttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaaggactgtcgactgatcttgttggagatgtatttgacta 60172  T
Q  110 tctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagtatgtaacaacat--cacaatcacatctatgtactcagaatatatta 207  Q
    ||| | |||||| || ||||||||||||| || |||| | ||| | ||||||||||||||||||||  |||||||||||| ||||||||| |||||||||    
T  60171 tctttccaataagctcgtattcatatctattcatgtccaataatataagttagtatgtaacaacatcacacaatcacatccatgtactcataatatatta 60072  T
Q  208 taaatttctaactatttcgacatataaataactaa 242  Q
    || |||| ||||||||| |||||||||||||||||    
T  60071 tacatttttaactattttgacatataaataactaa 60037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 296 - 499
Target Start/End: Complemental strand, 59899 - 59696
Alignment:
Q  296 atggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttgaaacctattttcatgctca 395  Q
    |||||||| || ||||||||||||  | |||||||||||||||||| ||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  59899 atggtagctgggcaagttagcagccagactcagagccactttccattgctgcaacctctccatgtttttcgtatcattttgaaacctattttcatgctca 59800  T
Q  396 gccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtcttgtagcact 495  Q
    ||||||||||  ||||| |||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||  || |||||||| |    
T  59799 gccaatgctttaccatacctacctgtatgatgtcgcacatcagtaggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagt 59700  T
Q  496 gaat 499  Q
    ||||    
T  59699 gaat 59696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 1e-60; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 267814 - 268067
Alignment:
Q  4 ttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatt 103  Q
    ||||| |||||  ||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  267814 ttatcaagaagcaatttcacttgttgtacttgagaccataatccaacagggtaattggcaacatgtaagggctcacgactgatcttgttggagatgtatt 267913  T
Q  104 tgactatctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagt------tagtatgtaacaacat--cacaatcacatc----tatg 191  Q
    ||||||||||| ||||||||||||||||||||||| || |||| | |||   ||||      ||||||||||||||||  ||||||||||||     |||    
T  267914 tgactatctctccaataaacttgtattcatatctattcatgtcaaataatgcaagttagtaatagtatgtaacaacatcacacaatcacatccatgcatg 268013  T
Q  192 tactcagaatatattataaatttctaactatttcgacatataaataactaatac 245  Q
    |||||| |||||||||||  ||||||||||||||| |||||||| |||||||||    
T  268014 tactcaaaatatattatacgtttctaactatttcgtcatataaacaactaatac 268067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 288 - 499
Target Start/End: Original strand, 28127516 - 28127727
Alignment:
Q  288 ggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttgaaacctatttt 387  Q
    ||||||| |||||||||||||||||||||||||||| | ||||| |  |||||| | ||||| | ||||||||| || || | |||||| ||||| | |     
T  28127516 ggactataatggtagccggacaagttagcagcttgggttagagctatcttccattggtgcaatcgctccatgtttttcttgttattttggaacctctctc 28127615  T
Q  388 catgctcagccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtctt 487  Q
    |||||| ||| |   |||  |||||||| ||| |||||| |||||||| ||| || ||||| |||||||||||||||||||| |||||||||| ||||||    
T  28127616 catgcttagcaagctcttcaccataactccctgtatgatatcgcacatcagtaggatccacgccaaagaaaacaggcaaaactaggcgaccctttgtctt 28127715  T
Q  488 gtagcactgaat 499  Q
    |||||| |||||    
T  28127716 gtagcagtgaat 28127727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 288 - 499
Target Start/End: Original strand, 28164200 - 28164410
Alignment:
Q  288 ggactatgatggtagccggacaagttagcagcttggctcagagccactttccatcgctgcaacctctccatgttatttttatcattttgaaacctatttt 387  Q
    ||||||| |||||||||||||||||||||||||||| | ||||| |  |||||| | ||||| | ||||||||| || || | |||||| ||||| |       
T  28164200 ggactataatggtagccggacaagttagcagcttgggttagagctatcttccattggtgcaatcgctccatgtttttcttgttattttggaacctctcac 28164299  T
Q  388 catgctcagccaatgcttggccataactacctttatgatgtcgcacattagttggttccacaccaaagaaaacaggcaaaacgaggcgaccctctgtctt 487  Q
    |||||| ||  |   ||| ||||||||| ||| ||||||||||||||| ||| || ||||| |||| ||||||||||||||| |||||||||| ||||||    
T  28164300 catgcttagtaagatctttgccataactccctgtatgatgtcgcacatcagtaggatccacgccaa-gaaaacaggcaaaactaggcgaccctttgtctt 28164398  T
Q  488 gtagcactgaat 499  Q
    |||||| |||||    
T  28164399 gtagcagtgaat 28164410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 28163849 - 28163980
Alignment:
Q  4 ttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatt 103  Q
    |||||||||||  ||||||||| |||||||||||| |||||||||||||| || || |||||||||||      |||| ||||| ||| |||| ||  ||    
T  28163849 ttatcgagaagcaatttcacttgttgtacttgagattgtaatccaacaggatattttgcaacatgtaaaaaaacacgattgatcctgtcggaggtgcctt 28163948  T
Q  104 tgactatctcttcaataaacttgtattcatat 135  Q
    ||| |||||| | |||||||||||||||||||    
T  28163949 tgattatctcctgaataaacttgtattcatat 28163980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 28127149 - 28127283
Alignment:
Q  4 ttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatt 103  Q
    |||||||||||  | ||||||| |||||||||   ||||||||||||||| || |||||||||||||||     |||| ||||| ||| ||| |||| ||    
T  28127149 ttatcgagaagcaaattcacttgttgtacttggtcctgtaatccaacaggatatttggcaacatgtaagaaaacacgattgatcctgtcggatatgtctt 28127248  T
Q  104 tgactatctcttcaataaacttgtattcatatcta 138  Q
    ||| |||||  | ||||||||||||||||||||||    
T  28127249 tgattatcttctgaataaacttgtattcatatcta 28127283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 4 - 164
Target Start/End: Original strand, 29273312 - 29273472
Alignment:
Q  4 ttatcgagaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatt 103  Q
    ||||| ||||| ||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||   || ||||||||||||||||||||||    
T  29273312 ttatcaagaagcgatttgacttgttgtacttgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatt 29273411  T
Q  104 tgactatctcttcaataaacttgtattcatatctactcgtgtcgagtaagaaaagttagta 164  Q
    ||||||||||| | ||||||||||||||||||||| || |||| | ||| | |||||||||    
T  29273412 tgactatctctccgataaacttgtattcatatctattcatgtcaaataatacaagttagta 29273472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 17801759 - 17801698
Alignment:
Q  10 agaagtgatttcactttttgtacttgagactgtaatccaacagggtaattggcaacatgtaa 71  Q
    |||||||| ||||||||||| ||| |||||| ||| |||| |||||| ||||||||||||||    
T  17801759 agaagtgagttcactttttgcactcgagactctaaaccaatagggtatttggcaacatgtaa 17801698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 28116 - 28028
Alignment:
Q  46 ccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatctcttcaataaacttgtattcata 134  Q
    ||||||||||||| |||||||||||| ||   | || |||||||||| || || |||||||||||||  || ||||||| | |||||||    
T  28116 ccaacagggtaatcggcaacatgtaaaggaacatgattgatcttgttagatatatatttgactatcttctcgataaactcgcattcata 28028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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