View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18488_low_2 (Length: 518)
Name: NF18488_low_2
Description: NF18488
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18488_low_2 |
 | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold1335 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-128; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 220 - 508
Target Start/End: Complemental strand, 4627707 - 4627419
Alignment:
| Q |
220 |
aagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacct |
319 |
Q |
| |
|
||||||||||||||||| ||||||| |||| |||||||||||||||| | ||||||| ||||||||| | |||||||||| ||| ||||||||||||| |
|
|
| T |
4627707 |
aagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaattacttcaccttagaggctttcacataacct |
4627608 |
T |
|
| Q |
320 |
ttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatgg |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4627607 |
ttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatgg |
4627508 |
T |
|
| Q |
420 |
tttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctttg |
508 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4627507 |
tttaacaccactagaaggtgatggcgatgttactcaagacataccatctctttcccaatcaataagaaagaacttccttcagccctttg |
4627419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 185 - 508
Target Start/End: Original strand, 4258709 - 4259035
Alignment:
| Q |
185 |
aagtttcatcaaagatgagttattttgctgataa---aaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaact |
281 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| | ||||| ||||| |
|
|
| T |
4258709 |
aagtttcctcaaagatgagttattttgctgataataaaaagccacatgctgtgttgattccatatccagctcaaggccatatcaatccattgttcaaact |
4258808 |
T |
|
| Q |
282 |
agcaaagcttcttcaccttaaaggttttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgat |
381 |
Q |
| |
|
||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4258809 |
agctaagcttcttcactttaaaggttttcacataacctttgtcaacactgaatataatcacaaacgtttgctcaaatcaagaggtgaaaatgccgttgat |
4258908 |
T |
|
| Q |
382 |
ggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaa |
481 |
Q |
| |
|
|||||| |||||||||||||||||| || | ||||||| | || ||| | ||||||||||||||||||||||||||| ||||||| ||||||||||| | |
|
|
| T |
4258909 |
ggtttcattgattttacctttgagactattcaagatggtctgactccagtggaaggtgatggcgatgttactcaagacgtaccctccctttctcaatcta |
4259008 |
T |
|
| Q |
482 |
taagaaagaacttccttcagccctttg |
508 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
4259009 |
taagaaagaacttccttcagccctttg |
4259035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 185 - 491
Target Start/End: Complemental strand, 4623905 - 4623593
Alignment:
| Q |
185 |
aagtttcatcaaagatgagttattttgctgataa------aaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaa |
278 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||| ||||||||| |||||| ||||||||| | ||||| || |
|
|
| T |
4623905 |
aagtttcatcaaagatgagttattttgctaataataataaaaagccacatgctgtgttgattgcatatccagttcaaggtcatatcaatccattgttcaa |
4623806 |
T |
|
| Q |
279 |
actagcaaagcttcttcaccttaaaggttttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgccttt |
378 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||| ||| |||||| |
|
|
| T |
4623805 |
actagcaaagcttctttaccttaaaggctttcacataacctttggtcacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggccttt |
4623706 |
T |
|
| Q |
379 |
gatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaat |
478 |
Q |
| |
|
||||||||| || |||| |||||||||||| |||||||||||||||||| | ||||||||||| ||||||| |||||||||||||||||||||| | | |
|
|
| T |
4623705 |
gatggtttcacggactttaactttgagaccattccagatggtttaacaccaatggaaggtgatggtgatgttagtcaagacataccctctctttctgatt |
4623606 |
T |
|
| Q |
479 |
caataagaaagaa |
491 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
4623605 |
caataaggaagaa |
4623593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 213 - 497
Target Start/End: Complemental strand, 4558689 - 4558405
Alignment:
| Q |
213 |
tgataaaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcac |
312 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| ||||||||||||| ||| |||||| |
|
|
| T |
4558689 |
tgataaaaaaccacatgctgtgttaattccatatccagttcaaggccatatcaatccattgttgaaactagcaaaacttcttcaccttagaggatttcac |
4558590 |
T |
|
| Q |
313 |
ataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatac |
412 |
Q |
| |
|
||||||| ||| |||||||||||||| |||||||| |||||||| ||||||||| ||||||||||||||||||| |||||||| ||||||||| || | |
|
|
| T |
4558589 |
ataacctatgtaaacactgaatacaaccacaaacggttgctcaagtcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattc |
4558490 |
T |
|
| Q |
413 |
cagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcct |
497 |
Q |
| |
|
| ||||||||||| ||| || |||||||||||||||| ||||||||| | |||||| | ||||||| |||||||||||||| |
|
|
| T |
4558489 |
cggatggtttaactccaacggatggtgatggcgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcct |
4558405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 223 - 507
Target Start/End: Complemental strand, 4594564 - 4594280
Alignment:
| Q |
223 |
ccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttg |
322 |
Q |
| |
|
|||||||||||||| |||||| |||| |||||| ||||| ||| | ||||| ||||| ||||| ||||||||||||| ||| |||||||||||||||| |
|
|
| T |
4594564 |
ccacatgctgtgttgattccagctccacttcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagaggatttcacataacctttg |
4594465 |
T |
|
| Q |
323 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
422 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| || ||||| |||||| ||||||||||||||| | |
|
|
| T |
4594464 |
tcaacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgccttagatggtttccctggttttagctttgaaaccataccagatggtct |
4594365 |
T |
|
| Q |
423 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagcccttt |
507 |
Q |
| |
|
||||||| | ||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||| |||||| | |||||| |
|
|
| T |
4594364 |
aacaccaatggaaggtgatggtgatgttagtcaagacataccctctcttgctcaatctataagaaagaatttccttaaacccttt |
4594280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 192 - 451
Target Start/End: Complemental strand, 4507496 - 4507237
Alignment:
| Q |
192 |
atcaaagatgagttattttgctgataaaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagctt |
291 |
Q |
| |
|
||||||||||||| ||||||| | | ||| |||||||||||||| |||||||||||| ||||||||||||||||| | ||||| |||||||| |||||| |
|
|
| T |
4507496 |
atcaaagatgagtaattttgcaaagagaaaaccacatgctgtgttgattccatatccaactcaaggccatatcaatccattgttcaaactagctaagctt |
4507397 |
T |
|
| Q |
292 |
cttcaccttaaaggttttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatg |
391 |
Q |
| |
|
||||||||| ||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
4507396 |
cttcaccttcgaggctttcacataacctttgttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtgaaaatgcctttgatggtttcactg |
4507297 |
T |
|
| Q |
392 |
attttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgtta |
451 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||| ||| | || |||||||| ||||||| |
|
|
| T |
4507296 |
attttaactttgagactctaccagatggtttaactccaatggatggtgatggtgatgtta |
4507237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 220 - 491
Target Start/End: Complemental strand, 4517897 - 4517626
Alignment:
| Q |
220 |
aagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacct |
319 |
Q |
| |
|
||||||||||| ||| ||| |||||||||| |||||||||||||||| ||||||| ||||||||||| |||||||| |||| ||| ||||||||||||| |
|
|
| T |
4517897 |
aagccacatgcagtgataactccatatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcatcttagaggctttcacataacct |
4517798 |
T |
|
| Q |
320 |
ttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatgg |
419 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||| || |||||||| |
|
|
| T |
4517797 |
ttgtcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatgg |
4517698 |
T |
|
| Q |
420 |
tttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaa |
491 |
Q |
| |
|
|||||| || ||||||| ||||| ||||||| ||||||||| ||||||||| | |||||||||||||| |
|
|
| T |
4517697 |
tttaactccgatagaaggcgatggtgatgttagtcaagacattatctctctttccgattcaataagaaagaa |
4517626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 223 - 498
Target Start/End: Complemental strand, 4618855 - 4618580
Alignment:
| Q |
223 |
ccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttg |
322 |
Q |
| |
|
||||||| |||| | ||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
4618855 |
ccacatgttgtgatgattccatatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagaggctttcacataacctttg |
4618756 |
T |
|
| Q |
323 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
422 |
Q |
| |
|
| ||||| ||||||||||||||||| |||||||||||||||||| ||| || |||||||||||| || |||| |||||||| ||| ||||||||||| |
|
|
| T |
4618755 |
ttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcttttgatggtttcacggactttaactttgagagcattccagatggttt |
4618656 |
T |
|
| Q |
423 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcctt |
498 |
Q |
| |
|
||||||| | ||||||||||| ||||||| |||||| |||| |||||| ||||||| ||||||||||||||||| |
|
|
| T |
4618655 |
aacaccaatggaaggtgatggtgatgttagtcaagatgtaccaactctttgtcaatcagtaagaaagaacttcctt |
4618580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 192 - 482
Target Start/End: Complemental strand, 3173588 - 3173298
Alignment:
| Q |
192 |
atcaaagatgagttattttgctgataaaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagctt |
291 |
Q |
| |
|
||||||||||||| | ||||| | | ||| |||||||| ||||||| ||||||||||| |||||||||||||||| | ||||||||||||||||| || |
|
|
| T |
3173588 |
atcaaagatgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaacta |
3173489 |
T |
|
| Q |
292 |
cttcaccttaaaggttttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatg |
391 |
Q |
| |
|
|||||| ||| ||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| ||| |
|
|
| T |
3173488 |
cttcactttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatg |
3173389 |
T |
|
| Q |
392 |
attttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaat |
482 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||| || | ||||||||||| ||||||| ||||||| ||| | |||||| || |||||| |
|
|
| T |
3173388 |
attttaactttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaat |
3173298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 217 - 471
Target Start/End: Complemental strand, 4576015 - 4575761
Alignment:
| Q |
217 |
aaaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataa |
316 |
Q |
| |
|
|||||||||||||| ||||||| ||||| ||||| |||||||||||||||| | ||||||||| ||||||| || |||||||||| ||| |||||||||| |
|
|
| T |
4576015 |
aaaaagccacatgcagtgttaactccatttccagttcaaggccatatcaatgcattgttgaaaatagcaaaactgcttcaccttagaggctttcacataa |
4575916 |
T |
|
| Q |
317 |
cctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccaga |
416 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| |||||||| |
|
|
| T |
4575915 |
cctttgttaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccaga |
4575816 |
T |
|
| Q |
417 |
tggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctt |
471 |
Q |
| |
|
||||||||| ||| || ||| |||| ||||| | ||||||| ||| ||||||| |
|
|
| T |
4575815 |
tggtttaactccaaaggatggtaatggtgatgtaagtcaagacctacactctctt |
4575761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 192 - 458
Target Start/End: Original strand, 4488740 - 4489006
Alignment:
| Q |
192 |
atcaaagatgagttattttgctgataaaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagctt |
291 |
Q |
| |
|
||||||||||||| | |||| || | |||||||||||| ||||||| |||| ||||| |||||||||||||||| | ||||||||||||| ||| || |
|
|
| T |
4488740 |
atcaaagatgagtaactttgaagagagaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaacta |
4488839 |
T |
|
| Q |
292 |
cttcaccttaaaggttttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatg |
391 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| || |
|
|
| T |
4488840 |
cttcaccttagaggatttcacataacctttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttaactg |
4488939 |
T |
|
| Q |
392 |
attttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaaga |
458 |
Q |
| |
|
|||||| ||||||||| || |||||||||||||| ||| ||| |||||||||||||||| |||||| |
|
|
| T |
4488940 |
attttagctttgagactattccagatggtttaactccaacagatggtgatggcgatgttagtcaaga |
4489006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 192 - 482
Target Start/End: Complemental strand, 4482450 - 4482160
Alignment:
| Q |
192 |
atcaaagatgagttattttgctgataaaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagctt |
291 |
Q |
| |
|
||||||||||||| | ||||| || ||||| |||||||| ||||| | ||||| |||||||||||||||||||||| | ||||||||| ||| ||| || |
|
|
| T |
4482450 |
atcaaagatgagtaactttgcagaaaaaaaaccacatgcagtgttgactccatttccagctcaaggccatatcaatgcattgttgaaaataggaaaacta |
4482351 |
T |
|
| Q |
292 |
cttcaccttaaaggttttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatg |
391 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||||| || |
|
|
| T |
4482350 |
cttcaccttagaggctttcacataacctttgtcaacaccgaatacaatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactg |
4482251 |
T |
|
| Q |
392 |
attttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaat |
482 |
Q |
| |
|
||||||||||||| || ||||||||||||||||| ||| | |||||||||| || || | ||||||| || ||||||| |||||||||| |
|
|
| T |
4482250 |
attttacctttgaaacgataccagatggtttaactccaattgaaggtgatgatgaagtaagtcaagacttattctctcttactcaatcaat |
4482160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 199 - 497
Target Start/End: Complemental strand, 4581592 - 4581294
Alignment:
| Q |
199 |
atgagttattttgctgataaaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcacc |
298 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||| ||||| |||||||||||| |||||| ||||||| | | || | | |||||||||||||||||||| |
|
|
| T |
4581592 |
atgagtcatttttctgataaaaagccacatgcagtgttgattccatatccacttcaaggacatatcactccattaataacactagcaaagcttcttcacc |
4581493 |
T |
|
| Q |
299 |
ttaaaggttttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttac |
398 |
Q |
| |
|
||| ||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| || |||||||||||| |||||||| |
|
|
| T |
4581492 |
ttagaggctttcacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcgtttgatggtttcaccgattttac |
4581393 |
T |
|
| Q |
399 |
ctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcct |
497 |
Q |
| |
|
||||||||| || |||||||||||||| || ||||||| ||| | ||||||| |||||||||| |||| | | ||||||| |||||||||||||| |
|
|
| T |
4581392 |
ctttgagactattccagatggtttaactccgatagaaggcgatagtgatgttaatcaagacatatatgctctatgtgaatcaatcagaaagaacttcct |
4581294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 213 - 461
Target Start/End: Complemental strand, 4572530 - 4572282
Alignment:
| Q |
213 |
tgataaaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcac |
312 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||||| |||||||||||||||| | |||||| |||||||||| |||||||||||| |||||||||| |
|
|
| T |
4572530 |
tgataaaaaaccacatgctgtgttaatcccatatccagttcaaggccatatcaatccattgttgcaactagcaaaatttcttcaccttagaggttttcac |
4572431 |
T |
|
| Q |
313 |
ataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccatac |
412 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||| |||||| |||||||| || | |
|
|
| T |
4572430 |
ataacctatgtaaacactgaatacaatcacaaacggttgctcaagtcaagaggtcaaaatgcctttgatggtttcaccaattttaactttgagagtattc |
4572331 |
T |
|
| Q |
413 |
cagatggtttaacaccactagaaggtgatggcgatgttactcaagacat |
461 |
Q |
| |
|
||||||||||| | ||| || || ||||||||||||| ||||||||| |
|
|
| T |
4572330 |
cagatggtttatctccaacggatggcgatggcgatgttagtcaagacat |
4572282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 219 - 508
Target Start/End: Original strand, 4265627 - 4265916
Alignment:
| Q |
219 |
aaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacc |
318 |
Q |
| |
|
|||||||||||||||||| |||||| |||| |||||||||||||||| | ||||| || |||| ||||||||||||||||| ||| |||||||||||| |
|
|
| T |
4265627 |
aaagccacatgctgtgttgattccagctccatttcaaggccatatcaatgcattgttcaatctaggaaagcttcttcaccttagaggctttcacataacc |
4265726 |
T |
|
| Q |
319 |
tttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatg |
418 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||| |||| | ||||||||||| ||| |||| ||||||||||||||||||| |
|
|
| T |
4265727 |
tttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaattctcttgatggtttcagtgactttaagtttgagaccataccagatg |
4265826 |
T |
|
| Q |
419 |
gtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctttg |
508 |
Q |
| |
|
|| |||| ||| | ||||| |||| |||| ||||||||||||| | ||||| |||||||| | | |||||||||||| ||||||| |
|
|
| T |
4265827 |
gtctaactccaatggaaggcaatggtgatgctactcaagacatataccctcttgtgcaatcaatcatgacgaacttccttcaaccctttg |
4265916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 226 - 497
Target Start/End: Complemental strand, 4587183 - 4586912
Alignment:
| Q |
226 |
catgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttgtca |
325 |
Q |
| |
|
|||||||||||||| |||| ||||| |||||||||||||||| | |||||||||||||| || |||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
4587183 |
catgctgtgttaatcccatctccagttcaaggccatatcaatccattgttgaaactagctaaacttcttcaccttcgaggatttcacataacctttgtaa |
4587084 |
T |
|
| Q |
326 |
acactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtttaac |
425 |
Q |
| |
|
|||||||||||||||||||||| ||||| || ||||||| | |||||||||||||| ||| |||||||| ||||||||| || |||||||||||||| |
|
|
| T |
4587083 |
acactgaatacaatcacaaacggttgcttaagtcaagagctccaaatgcctttgatgatttaactgattttagctttgagactattccagatggtttaac |
4586984 |
T |
|
| Q |
426 |
accactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcct |
497 |
Q |
| |
|
||| || |||||||| ||||||| ||||||||| | |||||| | ||||||| |||||||||||||| |
|
|
| T |
4586983 |
tccaacggatggtgatggtgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcct |
4586912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 225 - 507
Target Start/End: Complemental strand, 4603662 - 4603380
Alignment:
| Q |
225 |
acatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttgtc |
324 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||||||| | |||||||||||||||| || ||||||||| ||| |||||||||||||||||| |
|
|
| T |
4603662 |
acatgctgtgttgattccatatccacttcaaggccatatcaatccaatgttgaaactagcaaaactatttcaccttagaggatttcacataacctttgtc |
4603563 |
T |
|
| Q |
325 |
aacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtttaa |
424 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||| |||||||| || || ||| |||||||| |||||| || || |||||||| ||| |
|
|
| T |
4603562 |
aacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgccttagacggcttcactgattttagctttgaaacaatcccagatggactaa |
4603463 |
T |
|
| Q |
425 |
caccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagcccttt |
507 |
Q |
| |
|
|||| | |||||||||| |||||| |||||| |||| ||| |||||||||| ||||||||||| |||||| | |||||| |
|
|
| T |
4603462 |
caccgatggaaggtgatgataatgttagtcaagatgtaccttctatttctcaatctataagaaagaatttccttaaacccttt |
4603380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 223 - 498
Target Start/End: Complemental strand, 4565583 - 4565308
Alignment:
| Q |
223 |
ccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttg |
322 |
Q |
| |
|
|||||||||||||| |||||| |||| |||||| ||||| ||| | ||||| ||||| ||||| ||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
4565583 |
ccacatgctgtgttgattccagctccatttcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagaggatttcatataacctttg |
4565484 |
T |
|
| Q |
323 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
422 |
Q |
| |
|
||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||| ||||||| | || |||| |||||| ||||||||||||||| | |
|
|
| T |
4565483 |
tcaacactgaatacaatcataaacgattgctaaaatcaagaggtccaaatgccttagatggttcccgtggtttttgctttgaaaccataccagatggtct |
4565384 |
T |
|
| Q |
423 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcctt |
498 |
Q |
| |
|
|||||| ||||||||||||| ||||||| |||||| |||| |||||| ||||||| |||||||| || |||||| |
|
|
| T |
4565383 |
aacaccgatagaaggtgatggtgatgttagtcaagatgtaccttctcttgctcaatctataagaaaaaatttcctt |
4565308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 223 - 420
Target Start/End: Original strand, 4612292 - 4612489
Alignment:
| Q |
223 |
ccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttg |
322 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||||||||||||| | || | ||||||||||| ||||||||||||| ||| ||||||||||| || | |
|
|
| T |
4612292 |
ccacatgcagtgttaattccatatccagttcaaggccatatcaatccattaatcaaactagcaaaacttcttcaccttagaggctttcacataacattcg |
4612391 |
T |
|
| Q |
323 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggt |
420 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| | |||||||||||| |
|
|
| T |
4612392 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgttggtttcactgattttacctttgaggctataccagatggt |
4612489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 217 - 471
Target Start/End: Complemental strand, 4562226 - 4561968
Alignment:
| Q |
217 |
aaaaagccacatgctgtgttaatt----ccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcac |
312 |
Q |
| |
|
|||| ||||||||| ||||||||| |||| ||||| |||||| ||||||||| | ||||||||| ||||||| || |||||||| | ||| |||||| |
|
|
| T |
4562226 |
aaaaggccacatgcagtgttaattaactccatttccagttcaaggtcatatcaatgcattgttgaaaatagcaaaactgcttcacctaagaggctttcac |
4562127 |
T |
|
| Q |
313 |
ataa-cctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccata |
411 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||| ||| |
|
|
| T |
4562126 |
ataaacctttgttaacactgaatacaatcacaaacgtttgct-aaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactata |
4562028 |
T |
|
| Q |
412 |
ccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctt |
471 |
Q |
| |
|
|||||||||||||| ||| || |||||||| ||| ||| ||||||| ||| ||||||| |
|
|
| T |
4562027 |
ccagatggtttaactccaaaggatggtgatggtgatattagtcaagacctacactctctt |
4561968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 307 - 459
Target Start/End: Original strand, 4502951 - 4503103
Alignment:
| Q |
307 |
tttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgaga |
406 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4502951 |
tttcacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcaatgattttacctttgaga |
4503050 |
T |
|
| Q |
407 |
ccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagac |
459 |
Q |
| |
|
||||||||||||||||||| || | ||||||||||| ||||||| ||||||| |
|
|
| T |
4503051 |
ccataccagatggtttaactccggtggaaggtgatggtgatgttagtcaagac |
4503103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 192 - 422
Target Start/End: Complemental strand, 4471499 - 4471269
Alignment:
| Q |
192 |
atcaaagatgagttattttgctgataaaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagctt |
291 |
Q |
| |
|
|||||| |||||| ||||||| | | ||||||||||||||| || ||||||| |||||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
4471499 |
atcaaatatgagtaattttgcaaagacaaagccacatgctgtattgattccatgtccagctcaaggccatatcaatgcattgttgaaactagcaaagctt |
4471400 |
T |
|
| Q |
292 |
cttcaccttaaaggttttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatg |
391 |
Q |
| |
|
|||||||||| ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| || | ||||||||||| || |
|
|
| T |
4471399 |
cttcaccttagaggctttcacataacgtttgtcaacactgaatacaatcacaaagccttgctcaattcaagaggtcctgattctcttgatggtttcactg |
4471300 |
T |
|
| Q |
392 |
attttacctttgagaccataccagatggttt |
422 |
Q |
| |
|
| |||| |||||||||||| ||| ||||||| |
|
|
| T |
4471299 |
actttaactttgagaccattccaaatggttt |
4471269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 240 - 491
Target Start/End: Complemental strand, 4569607 - 4569360
Alignment:
| Q |
240 |
tccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttgtcaacactgaatacaat |
339 |
Q |
| |
|
|||||||||| |||||||||||||||| | || |||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||| ||| || |
|
|
| T |
4569607 |
tccatatccacttcaaggccatatcaatccattattgaaactagcaaaacttcttcaccttagaggctttcacataacctttgtcaacaccgaa----at |
4569512 |
T |
|
| Q |
340 |
cacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtg |
439 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||| || |||||||||||||| || ||||||| |
|
|
| T |
4569511 |
cacaaacatttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgacagaaggtt |
4569412 |
T |
|
| Q |
440 |
atggcgatgttactcaagacataccctctctttctcaatcaataagaaagaa |
491 |
Q |
| |
|
|||| ||| ||| |||||| || ||||||| | | |||||||||||||| |
|
|
| T |
4569411 |
atggtgatattagtcaagaaattgtctctcttgatgattcaataagaaagaa |
4569360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 219 - 422
Target Start/End: Complemental strand, 4462765 - 4462562
Alignment:
| Q |
219 |
aaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacc |
318 |
Q |
| |
|
|||||||||||||||||| ||||||| |||| | ||||||||||||||| | ||||||||||||| ||| || |||||||||| |||||||||||||||| |
|
|
| T |
4462765 |
aaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggttttcacataacc |
4462666 |
T |
|
| Q |
319 |
tttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatg |
418 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||||| ||||||||| ||| | | ||||||||| ||| |||| |||||||||||| ||| ||| |
|
|
| T |
4462665 |
tttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctctagatggtttcactgactttaactttgagaccattccaaatg |
4462566 |
T |
|
| Q |
419 |
gttt |
422 |
Q |
| |
|
|||| |
|
|
| T |
4462565 |
gttt |
4462562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 223 - 425
Target Start/End: Original strand, 4513553 - 4513755
Alignment:
| Q |
223 |
ccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttg |
322 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||||||||||| | |||| | | ||||||| || |||||||||| ||| |||||||||||||||| |
|
|
| T |
4513553 |
ccacatgctgtgttgattccatatccacttcaaggccatatcaatccaatgttcagattagcaaaactacttcaccttagaggctttcacataacctttg |
4513652 |
T |
|
| Q |
323 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
422 |
Q |
| |
|
| ||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| ||||||||| || || |||||||| |
|
|
| T |
4513653 |
ttaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgcttttgatggtttcaccgattttcgctttgagactattcctgatggttt |
4513752 |
T |
|
| Q |
423 |
aac |
425 |
Q |
| |
|
||| |
|
|
| T |
4513753 |
aac |
4513755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 323 - 508
Target Start/End: Original strand, 4298172 - 4298357
Alignment:
| Q |
323 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
422 |
Q |
| |
|
||||||| |||||||||||||||| ||||| ||||||| ||| ||| || |||||||||||| | |||| ||||||||| || ||||||||| | |
|
|
| T |
4298172 |
tcaacaccgaatacaatcacaaacacctgctcgaatcaaggggtccaaaagcttttgatggtttcaccaactttagctttgagactattccagatggtct |
4298271 |
T |
|
| Q |
423 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctttg |
508 |
Q |
| |
|
|| ||| ||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
4298272 |
gactccaacggaaggtgatggagatgttactcaagacataccatctctttcccaatcaatcagaaagaacttccttcagccctttg |
4298357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 185 - 385
Target Start/End: Original strand, 4255354 - 4255545
Alignment:
| Q |
185 |
aagtttcatcaaagatgagttattttgctgataaaaa---gccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaact |
281 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| || ||||||||||||||| ||||||||||||| |||||||||||||||| || || ||||| |
|
|
| T |
4255354 |
aagtttcatcaaagatgagttattttactgataataaaatgccacatgctgtgttgattccatatccagttcaaggccatatcaatctattattcaaact |
4255453 |
T |
|
| Q |
282 |
agcaaagcttcttcaccttaaaggttttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgat |
381 |
Q |
| |
|
|||||| | ||||| |||||||| |||||||||||| ||||||||||||||||| |||||| ||||||||||| ||| ||||||||| |
|
|
| T |
4255454 |
agcaaaattacttcatcttaaagg------------ctttgtcaacaccgaatacaatcacaaacgcttgctcgaatcaagaggtccaaaagcctttgat |
4255541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 277 - 497
Target Start/End: Complemental strand, 4599663 - 4599443
Alignment:
| Q |
277 |
aaactagcaaagcttcttcaccttaaaggttttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
376 |
Q |
| |
|
|||||||||||| |||||||||||| ||| ||| |||||||||| || ||||| || |||||||||||||| |||||||||||||||||| ||| | |
|
|
| T |
4599663 |
aaactagcaaagattcttcaccttagaggattttacataaccttcgtgaacaccgagtacaatcacaaacgcttgctcaaatcaagaggtcctaattctc |
4599564 |
T |
|
| Q |
377 |
ttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctca |
476 |
Q |
| |
|
| |||||||| ||||||| |||| ||||| || |||||||||||||| ||| |||| |||||||| |||||||| || |||||| ||||| | | | |
|
|
| T |
4599563 |
gtaatggtttcactgatttttccttcgagactattccagatggtttaactccaatagatggtgatggtgatgttacacaggacataaattctctctgtaa |
4599464 |
T |
|
| Q |
477 |
atcaataagaaagaacttcct |
497 |
Q |
| |
|
|||||| ||||| |||||||| |
|
|
| T |
4599463 |
atcaatcagaaataacttcct |
4599443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 4497788 - 4497897
Alignment:
| Q |
192 |
atcaaagatgagttattttgctgataaaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagctt |
291 |
Q |
| |
|
||||||||||||| | |||| || |||||||||||||| ||||||| ||||| |||| | |||||||||||||| | ||||||||||||| ||| | |
|
|
| T |
4497788 |
atcaaagatgagtaactttgaagagaaaaagccacatgcagtgttaactccatttccaatttaaggccatatcaatccattgttgaaactaggaaaatta |
4497887 |
T |
|
| Q |
292 |
cttcacctta |
301 |
Q |
| |
|
|||||||||| |
|
|
| T |
4497888 |
cttcacctta |
4497897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 366
Target Start/End: Original strand, 4483534 - 4483568
Alignment:
| Q |
332 |
aatacaatcacaaacgtttgctcaaatcaagaggt |
366 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
4483534 |
aatacaatcacaaacgtttgctcaaatcaagaggt |
4483568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 366
Target Start/End: Complemental strand, 4496222 - 4496189
Alignment:
| Q |
333 |
atacaatcacaaacgtttgctcaaatcaagaggt |
366 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |
|
|
| T |
4496222 |
atacaatgacaaacgtttgctcaaatcaagaggt |
4496189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 4493459 - 4493415
Alignment:
| Q |
223 |
ccacatgctgtgttaattccatatccagctcaaggccatatcaat |
267 |
Q |
| |
|
|||||||| ||||| ||||||| |||||||||||| ||||||||| |
|
|
| T |
4493459 |
ccacatgcagtgttgattccatttccagctcaaggtcatatcaat |
4493415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 148; Significance: 7e-78; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 223 - 498
Target Start/End: Complemental strand, 1282987 - 1282712
Alignment:
| Q |
223 |
ccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttg |
322 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||| | ||||| ||||||||||| || |||||||||| ||| ||| |||||||||||| |
|
|
| T |
1282987 |
ccacatgctgtgttgattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaactacttcaccttagaggcttttacataacctttg |
1282888 |
T |
|
| Q |
323 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
422 |
Q |
| |
|
| || |||||||||||||||||||| |||||||||||||||||| ||||||| | ||||||||| |||||||| |||||| ||||| ||||||||| | |
|
|
| T |
1282887 |
ttaatactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgccctagatggtttcactgattttagctttgaaaccatcccagatggtct |
1282788 |
T |
|
| Q |
423 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcctt |
498 |
Q |
| |
|
|||| |||||||||||||||| ||||||| |||| | |||| ||||||| |||||| ||||||||||| |||||| |
|
|
| T |
1282787 |
aacatcactagaaggtgatggtgatgttagtcaacatgtaccttctctttgtcaatctataagaaagaatttcctt |
1282712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 301 - 351
Target Start/End: Complemental strand, 35776322 - 35776272
Alignment:
| Q |
301 |
aaaggttttcacataacctttgtcaacactgaatacaatcacaaacgtttg |
351 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| ||| |||||||||||| |
|
|
| T |
35776322 |
aaaggttttcacataacctttgtgaacactgaattcaaccacaaacgtttg |
35776272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 304 - 351
Target Start/End: Complemental strand, 35842126 - 35842079
Alignment:
| Q |
304 |
ggttttcacataacctttgtcaacactgaatacaatcacaaacgtttg |
351 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||| |||||||||||| |
|
|
| T |
35842126 |
ggttttcacataacctttgtgaacactgaattcaaccacaaacgtttg |
35842079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 304 - 351
Target Start/End: Complemental strand, 35854634 - 35854587
Alignment:
| Q |
304 |
ggttttcacataacctttgtcaacactgaatacaatcacaaacgtttg |
351 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||| |||||||||||| |
|
|
| T |
35854634 |
ggttttcacataacctttgtgaacactgaattcaaccacaaacgtttg |
35854587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 304 - 351
Target Start/End: Complemental strand, 35869243 - 35869196
Alignment:
| Q |
304 |
ggttttcacataacctttgtcaacactgaatacaatcacaaacgtttg |
351 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||| |||||||||||| |
|
|
| T |
35869243 |
ggttttcacataacctttgtgaacactgaattcaaccacaaacgtttg |
35869196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 351
Target Start/End: Complemental strand, 35759894 - 35759847
Alignment:
| Q |
304 |
ggttttcacataacctttgtcaacactgaatacaatcacaaacgtttg |
351 |
Q |
| |
|
||||| |||||||||||||| |||||||||| ||| |||||||||||| |
|
|
| T |
35759894 |
ggtttccacataacctttgtgaacactgaattcaaccacaaacgtttg |
35759847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 146; Significance: 1e-76; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 224 - 507
Target Start/End: Complemental strand, 1311 - 1031
Alignment:
| Q |
224 |
cacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttgt |
323 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||| | ||||| ||||||||||| ||| ||||||||| ||| | ||| |||||| ||| |
|
|
| T |
1311 |
cacatgctgtgttcattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaacttattcaccttagaggctctcatgtaacctatgt |
1212 |
T |
|
| Q |
324 |
caacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttta |
423 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| |||||||| |||||| ||||| ||||||||| || |
|
|
| T |
1211 |
caacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatcccagatggtcta |
1112 |
T |
|
| Q |
424 |
acaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagcccttt |
507 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||| |||| ||||||| |||||| ||||||||||| |||||| | |||||| |
|
|
| T |
1111 |
acaccactagaaggtgatggtgatgttagtcaa---ctaccttctctttgtcaatctataagaaagaatttccttaaacccttt |
1031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 146; Significance: 1e-76; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 224 - 507
Target Start/End: Complemental strand, 1676074 - 1675794
Alignment:
| Q |
224 |
cacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttgt |
323 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||| | ||||| ||||||||||| ||| ||||||||| ||| | ||| |||||| ||| |
|
|
| T |
1676074 |
cacatgctgtgttcattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaacttattcaccttagaggctctcatgtaacctatgt |
1675975 |
T |
|
| Q |
324 |
caacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttta |
423 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| |||||||| |||||| ||||| ||||||||| || |
|
|
| T |
1675974 |
caacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatcccagatggtcta |
1675875 |
T |
|
| Q |
424 |
acaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagcccttt |
507 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||| |||| ||||||| |||||| ||||||||||| |||||| | |||||| |
|
|
| T |
1675874 |
acaccactagaaggtgatggtgatgttagtcaa---ctaccttctctttgtcaatctataagaaagaatttccttaaacccttt |
1675794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 197 - 421
Target Start/End: Original strand, 20862358 - 20862582
Alignment:
| Q |
197 |
agatgagttattttgctgataaaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttca |
296 |
Q |
| |
|
|||||||| |||||||||| ||||| |||||||| ||||||| |||||||||| |||||| ||||||||| | |||| ||||||||||| || ||||| |
|
|
| T |
20862358 |
agatgagtaattttgctgagaaaaaaccacatgcagtgttaactccatatccacttcaaggtcatatcaatccaatgttaaaactagcaaaactacttca |
20862457 |
T |
|
| Q |
297 |
ccttaaaggttttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgatttt |
396 |
Q |
| |
|
||||| ||| ||| ||||||| |||||||| |||||||||||||||||||| ||||| || |||| ||| || |||||||||||||| ||| ||| |
|
|
| T |
20862458 |
ccttagaggcttttacataacatttgtcaatactgaatacaatcacaaacgcttgcttaagtcaatgggtccaataccctttgatggtttcactgacttt |
20862557 |
T |
|
| Q |
397 |
acctttgagaccataccagatggtt |
421 |
Q |
| |
|
|||||||||| | |||||||||| |
|
|
| T |
20862558 |
cgctttgagaccgttccagatggtt |
20862582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 391 - 507
Target Start/End: Original strand, 16685029 - 16685145
Alignment:
| Q |
391 |
gattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaaga |
490 |
Q |
| |
|
||||||| ||||||||| || ||| |||||||| | ||| || |||||||||||||||| ||||||||||| | |||||| | ||||||| ||||||| |
|
|
| T |
16685029 |
gattttagctttgagactattccatatggtttacctccaacggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcagaaaga |
16685128 |
T |
|
| Q |
491 |
acttccttcagcccttt |
507 |
Q |
| |
|
||||||| || |||||| |
|
|
| T |
16685129 |
acttcctccaacccttt |
16685145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 140; Significance: 4e-73; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 185 - 508
Target Start/End: Complemental strand, 3088337 - 3088014
Alignment:
| Q |
185 |
aagtttcatcaaagatgagttattttgctgataaaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagc |
284 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||| |||||| ||||| ||| | ||||| |||||||| |
|
|
| T |
3088337 |
aagtttcatcaaagatgagttactttgttgataaaaagccacatgctgtgttgattccatatccacttcaaggtcatataaatccattgttaaaactagc |
3088238 |
T |
|
| Q |
285 |
aaagcttcttcaccttaaaggttttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggt |
384 |
Q |
| |
|
||| ||||||||||||||||| |||||||||||||||||||| || |||||||||||||| |||||||| |||||||||||| ||| | |||||||| |
|
|
| T |
3088237 |
aaaacttcttcaccttaaaggctttcacataacctttgtcaataccgaatacaatcacaaccgtttgcttaaatcaagaggttctaattctcttgatggt |
3088138 |
T |
|
| Q |
385 |
ttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataa |
484 |
Q |
| |
|
||| ||||||| ||||||||| || | ||||||| |||| ||| | |||||| |||| ||||||| ||||||| | | ||||||| ||||||| | |
|
|
| T |
3088137 |
ttcactgattttgtctttgagactatccaagatggtctaactccaatggaaggtaatggtgatgttagtcaagacttggcatctctttgtcaatcagttg |
3088038 |
T |
|
| Q |
485 |
gaaagaacttccttcagccctttg |
508 |
Q |
| |
|
||||||||||| |||| ||||||| |
|
|
| T |
3088037 |
gaaagaacttcattcaaccctttg |
3088014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 133; Significance: 6e-69; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 217 - 500
Target Start/End: Complemental strand, 2384 - 2098
Alignment:
| Q |
217 |
aaaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataa |
316 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||| |||||||||||||||| | || || ||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
2384 |
aaaaaaccacatgctgtgttgattccatatccagttcaaggccatatcaatccattattcaaactagcaaagcttcttcaccttagaggctttcacataa |
2285 |
T |
|
| Q |
317 |
cctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccaga |
416 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||| ||||||| ||| ||||| || || || |
|
|
| T |
2284 |
cctttgtcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagactattcccga |
2185 |
T |
|
| Q |
417 |
tggtttaacaccactagaaggtgatggcg---atgttactcaagacataccctctctttctcaatcaataagaaagaacttccttca |
500 |
Q |
| |
|
||||||||| ||| | |||| ||||| | |||||| ||||||||||| |||||||| | ||||||| ||||| ||||||||||| |
|
|
| T |
2184 |
tggtttaactccagtggaagatgatgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttca |
2098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 223 - 500
Target Start/End: Original strand, 2025 - 2305
Alignment:
| Q |
223 |
ccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttg |
322 |
Q |
| |
|
||||||| |||| | ||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
2025 |
ccacatgttgtgatgattccatatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagaggctttcacataacctttg |
2124 |
T |
|
| Q |
323 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
422 |
Q |
| |
|
||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||| ||||||| ||| ||||| || || |||||||| |
|
|
| T |
2125 |
tcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagactattcccgatggttt |
2224 |
T |
|
| Q |
423 |
aacaccactagaaggtgatggcg---atgttactcaagacataccctctctttctcaatcaataagaaagaacttccttca |
500 |
Q |
| |
|
||| ||| | |||| ||||| | |||||| ||||||||||| |||||||| | ||||||| ||||| ||||||||||| |
|
|
| T |
2225 |
aactccagtggaagatgatgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttca |
2305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 110; Significance: 3e-55; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 219 - 508
Target Start/End: Complemental strand, 24104653 - 24104364
Alignment:
| Q |
219 |
aaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacc |
318 |
Q |
| |
|
|||||| ||||||||||| |||||| |||| |||||| ||||||||| | ||||| ||||||| ||||||||||||||||| ||| |||||||||||| |
|
|
| T |
24104653 |
aaagccgcatgctgtgttgattccagctccatttcaaggtcatatcaatgcattgttcaaactaggaaagcttcttcaccttagaggctttcacataacc |
24104554 |
T |
|
| Q |
319 |
tttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatg |
418 |
Q |
| |
|
|| || ||||| ||||||||||||||||| |||||| ||||||||| | ||| | ||||||||||| |||| |||| |||||||||||||||||||| |
|
|
| T |
24104553 |
ttcgtgaacaccgaatacaatcacaaacgcttgctcgaatcaagagatcctaattctcttgatggtttcaatgactttaactttgagaccataccagatg |
24104454 |
T |
|
| Q |
419 |
gtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctttg |
508 |
Q |
| |
|
|| |||| ||| | ||||| |||| |||||||||||||||||| | ||||| |||||||| | | |||||||||||||||||||| |
|
|
| T |
24104453 |
gtctaactccaatggaaggcaatggtgatgttactcaagacatataccctcttgtgcaatcaatcatgacgaacttccttcagccctttg |
24104364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 348
Target Start/End: Complemental strand, 26903670 - 26903638
Alignment:
| Q |
316 |
acctttgtcaacactgaatacaatcacaaacgt |
348 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |
|
|
| T |
26903670 |
acctttgttaacactgaatacaatcacaaacgt |
26903638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 437 - 506
Target Start/End: Original strand, 3310 - 3379
Alignment:
| Q |
437 |
gtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctt |
506 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||| ||| |||||||||| |
|
|
| T |
3310 |
gtgatggtgatgttactcaagacataccctctcttgttcaatctataagaacgaatttctttcagccctt |
3379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1335 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1335
Description:
Target: scaffold1335; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 1921 - 1971
Alignment:
| Q |
301 |
aaaggttttcacataacctttgtcaacactgaatacaatcacaaacgtttg |
351 |
Q |
| |
|
|||||||| || ||||||||||| |||||||||| ||| |||||||||||| |
|
|
| T |
1921 |
aaaggtttccatataacctttgtgaacactgaattcaaccacaaacgtttg |
1971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 1349579 - 1349627
Alignment:
| Q |
311 |
acataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatc |
359 |
Q |
| |
|
||||||| |||||||||||||||| ||| |||||||| || |||||||| |
|
|
| T |
1349579 |
acataacatttgtcaacactgaattcaaccacaaacgcttactcaaatc |
1349627 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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