View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18491_high_14 (Length: 435)
Name: NF18491_high_14
Description: NF18491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18491_high_14 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 316; Significance: 1e-178; HSPs: 18)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 13 - 364
Target Start/End: Complemental strand, 13244801 - 13244450
Alignment:
| Q |
13 |
aacttccacaacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaatgctatgaacttgt |
112 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
13244801 |
aacttccataacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaaagctatgaacttgt |
13244702 |
T |
|
| Q |
113 |
aagacggtacatttataatccctcctctcgctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttgctgcatccttcccattgc |
212 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
13244701 |
aagacggtacatttataatccctcctctagctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttgttgcatccttcccattgc |
13244602 |
T |
|
| Q |
213 |
atacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggagga |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
13244601 |
atacaaagaatatatcaactttgtatttggaccaacatgttctccactaggtagtatatcagatttgatagcgcacttgtgctgaaatgccagaggagga |
13244502 |
T |
|
| Q |
313 |
aatagccttaaggtttcacatatggctccatgaaggtaaacaagcttatcaa |
364 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13244501 |
tatagcctcaaggtttcacatatggctccatgaaggtaaacaagcttatcaa |
13244450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 371
Target Start/End: Complemental strand, 12964155 - 12963797
Alignment:
| Q |
13 |
aacttccacaacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaatgctatgaacttgt |
112 |
Q |
| |
|
||||||||||||| | ||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
12964155 |
aacttccacaacacattagcagcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaatgctatgaacttat |
12964056 |
T |
|
| Q |
113 |
aagacggtacatttataatccctcctctcgctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttgctgcatccttcccattgc |
212 |
Q |
| |
|
|||| || || | |||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||| |
|
|
| T |
12964055 |
aagatggcacttgtataatttctcctctatttgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattgc |
12963956 |
T |
|
| Q |
213 |
atacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggagga |
312 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||| ||||| || ||||||||||| | ||||| | ||||||| |
|
|
| T |
12963955 |
atacaaagaatatatcaactttgtatttggactaacatggtctccactaggtaatatatctgatttaattgcacacttgtgttcaaatggtataggagga |
12963856 |
T |
|
| Q |
313 |
aatagccttaaggtttcacatatggctccatgaaggtaaacaagcttatcaagctcttt |
371 |
Q |
| |
|
| |||||||| | |||||| || ||||||||||| |||||||||||||||||| |||| |
|
|
| T |
12963855 |
taaagccttaaagcttcacaaatagctccatgaagataaacaagcttatcaagcccttt |
12963797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 30 - 370
Target Start/End: Complemental strand, 13081128 - 13080788
Alignment:
| Q |
30 |
agctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaatgctatgaacttgtaagacggtacatttata |
129 |
Q |
| |
|
||||||||||||||||||||||| || |||| ||||||||||| ||| ||||| ||||||||||| || ||||||||||| |||||||| || | |||| |
|
|
| T |
13081128 |
agctgcaaccattttcatttgaagaaaactaatatctttcccaagacagcttcttggacctgcattaaacgctatgaacttataagacggcacttgtata |
13081029 |
T |
|
| Q |
130 |
atccctcctctcgctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttgctgcatccttcccattgcatacaaagaatatatca |
229 |
Q |
| |
|
|| |||||| ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| | |
|
|
| T |
13081028 |
atttgtcctctatctgatatccatctctcaggcttaaactccaagcaatcctctccccatatttgctccatccttcccattgcatacaaagaatatatta |
13080929 |
T |
|
| Q |
230 |
actttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggaggaaatagccttaaggtttc |
329 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||| ||| |||| ||||||||||||||||||||||||||||| | || |||| |||||||||||| ||| |
|
|
| T |
13080928 |
actttgtatttggactaacatggtctccactaggaagtttatccgatttgatagcacacttgtgctgaaatgctacagaaggatatagccttaaggcttc |
13080829 |
T |
|
| Q |
330 |
acatatggctccatgaaggtaaacaagcttatcaagctctt |
370 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
13080828 |
acatatggctccatgaaggtaaactagcttatcaagctctt |
13080788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 13 - 364
Target Start/End: Original strand, 13271498 - 13271849
Alignment:
| Q |
13 |
aacttccacaacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaatgctatgaacttgt |
112 |
Q |
| |
|
|||||||| || | |||||||||||||||||||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
13271498 |
aacttccataatacagaagctgcaaccattttcatttgaataaagctaatatctttcccaagacagcttctaggacctgcattgaatgctatgaacttgt |
13271597 |
T |
|
| Q |
113 |
aagacggtacatttataatccctcctctcgctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttgctgcatccttcccattgc |
212 |
Q |
| |
|
|||| ||||||| |||||| |||| | ||||||||||||| ||||||||||| |||||||||||| | ||||||| || | ||| ||||||||||| |
|
|
| T |
13271598 |
aagatggtacatgtataatttgtcctttatctgatatccatctctcaggcttaaactccaagcaatcaccaccccatacatgttccattcttcccattgc |
13271697 |
T |
|
| Q |
213 |
atacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggagga |
312 |
Q |
| |
|
||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||| || | ||||||||||| | ||||| | ||||||| |
|
|
| T |
13271698 |
atacaaagagtatattaactttgtgtttggaccaacatggtgtccactaggtagtatatcagaattaactgcacacttgtgatcaaatggtataggagga |
13271797 |
T |
|
| Q |
313 |
aatagccttaaggtttcacatatggctccatgaaggtaaacaagcttatcaa |
364 |
Q |
| |
|
| || || |||||||||||||| ||| |||||||||||| |||||||||| |
|
|
| T |
13271798 |
taaagtctcaaggtttcacatatagctgcatgaaggtaaatcagcttatcaa |
13271849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 13 - 372
Target Start/End: Complemental strand, 19279448 - 19279089
Alignment:
| Q |
13 |
aacttccacaacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaatgctatgaacttgt |
112 |
Q |
| |
|
|||||||| || | || ||||||||||||||||||||||| ||| ||| |||||| || | ||| ||||| ||||||||||| || ||||||||||||| |
|
|
| T |
19279448 |
aacttccataatacagcagctgcaaccattttcatttgaaggaaagtaatatcttttccgagacagcttctcggacctgcattaaacgctatgaacttgt |
19279349 |
T |
|
| Q |
113 |
aagacggtacatttataatccctcctctcgctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttgctgcatccttcccattgc |
212 |
Q |
| |
|
| || ||||||| |||||| |||||| | ||||||||||| |||||| |||||| | ||||||||| ||||||||||| | ||||||||||||||| |
|
|
| T |
19279348 |
acgatggtacatgtataatttgtcctctatccgatatccatctctcaggccgaaattctaggcaatcatcaccccatatttgttccatccttcccattgc |
19279249 |
T |
|
| Q |
213 |
atacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggagga |
312 |
Q |
| |
|
||||||||| ||||| |||||||||||| ||| |||||||| |||||||||||||||||| || || | ||||||||||| | ||||| | ||| ||| |
|
|
| T |
19279248 |
atacaaagagtatattaactttgtatttagactaacatggtctccactaggtagtatatcggaattaactgcacacttgtgttcaaatggtacaggtgga |
19279149 |
T |
|
| Q |
313 |
aatagccttaaggtttcacatatggctccatgaaggtaaacaagcttatcaagctctttc |
372 |
Q |
| |
|
| |||||||||| ||||||||| ||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
19279148 |
taaagccttaaggcttcacatatagctccatgaagataaactagcttatcaagctctttc |
19279089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 13 - 367
Target Start/End: Original strand, 13086019 - 13086373
Alignment:
| Q |
13 |
aacttccacaacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaatgctatgaacttgt |
112 |
Q |
| |
|
|||||||| |||| || |||||||||||||||||||||||| | ||||| ||||||||||| |||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
13086019 |
aacttccataacatagcagctgcaaccattttcatttgaacaatgctaatatctttcccaagacaacttcgaggacctgcattaaatgctatgaacttgc |
13086118 |
T |
|
| Q |
113 |
aagacggtacatttataatccctcctctcgctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttgctgcatccttcccattgc |
212 |
Q |
| |
|
|||| ||||||| | ||| |||| | ||||||||||||| || ||||||||||| |||| ||| | ||||||||||| | ||||||||||||||| |
|
|
| T |
13086119 |
aagatggtacatgcaaaatatgtcctttatctgatatccatctctcgggcttaaattcgaagcgatccttaccccatatttgtttcatccttcccattgc |
13086218 |
T |
|
| Q |
213 |
atacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggagga |
312 |
Q |
| |
|
||||||||| ||||| ||||| |||||||| ||||| | |||||||||||||||||||| |||||| ||||||||||||||||||| | ||||||| |
|
|
| T |
13086219 |
atacaaagagtatattaacttagtatttggtttaacataatctccactaggtagtatatcagctttgattgcacacttgtgctgaaatggtacaggagga |
13086318 |
T |
|
| Q |
313 |
aatagccttaaggtttcacatatggctccatgaaggtaaacaagcttatcaagct |
367 |
Q |
| |
|
| ||||| || | ||||||||| |||||||||||||| || || |||| ||||| |
|
|
| T |
13086319 |
taaagcctcaatgcttcacatatagctccatgaaggtacactagtttattaagct |
13086373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 13 - 286
Target Start/End: Complemental strand, 30368388 - 30368115
Alignment:
| Q |
13 |
aacttccacaacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaatgctatgaacttgt |
112 |
Q |
| |
|
|||||||| ||||| | |||||||||||| |||||||||||||| ||||||||||| || |||||||||||||| |||| |||||| ||||||||||||| |
|
|
| T |
30368388 |
aacttccataacaaggcagctgcaaccatcttcatttgaacgaaactaagatctttacccatacaacttctaggtcctgtattgaaagctatgaacttgt |
30368289 |
T |
|
| Q |
113 |
aagacggtacatttataatccctcctctcgctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttgctgcatccttcccattgc |
212 |
Q |
| |
|
|||| ||||||| |||||| ||||||| |||||| |||||| |||||||||||||||| |||||| ||||||||||||| | |||||||||||| || |
|
|
| T |
30368288 |
aagatggtacatgtataatgtgtcctctctctgatacccatctctcaggcttaaattccatgcaatcttctccccatattttttccatccttcccatagc |
30368189 |
T |
|
| Q |
213 |
atacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcac |
286 |
Q |
| |
|
||||||||| || || ||||| |||||||||| ||||| | ||||||||||||||||||||||||||| |||| |
|
|
| T |
30368188 |
atacaaagagtaaattaacttggtatttggactaacattctctccactaggtagtatatcagatttgattgcac |
30368115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 22 - 365
Target Start/End: Original strand, 13129749 - 13130092
Alignment:
| Q |
22 |
aacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaatgctatgaacttgtaagacggta |
121 |
Q |
| |
|
||||||| |||||| ||||| |||||||||| ||| ||||||||||| || |||||| |||| || |||| ||||| |||| |||||||||||| |||| |
|
|
| T |
13129749 |
aacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgttgaaagctacgaacttgtaagatggta |
13129848 |
T |
|
| Q |
122 |
catttataatccctcctctcgctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttgctgcatccttcccattgcatacaaaga |
221 |
Q |
| |
|
||| |||||| |||| ||| | ||||||||||| |||||||||||||||| ||| || |||||||||||||| | |||||||||||| | ||||||||| |
|
|
| T |
13129849 |
catgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcagtcttctccccatatttgttccatccttcccatagaatacaaaga |
13129948 |
T |
|
| Q |
222 |
atatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggaggaaatagcctt |
321 |
Q |
| |
|
|| ||||| |||||||||||| |||||||| ||||||||||||||||||||||||||| | ||| | |||| ||| | | ||||||| | |||||| |
|
|
| T |
13129949 |
gtaaatcaaagttgtatttggactaacatggtatccactaggtagtatatcagatttgattgaacagatatgctcaaaaggtataggaggataaagcctt |
13130048 |
T |
|
| Q |
322 |
aaggtttcacatatggctccatgaaggtaaacaagcttatcaag |
365 |
Q |
| |
|
|||||||||||||| |||||||| ||||| || ||||||||||| |
|
|
| T |
13130049 |
aaggtttcacatatagctccatggaggtatactagcttatcaag |
13130092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 13 - 365
Target Start/End: Original strand, 13094311 - 13094663
Alignment:
| Q |
13 |
aacttccacaacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaatgctatgaacttgt |
112 |
Q |
| |
|
||||||| ||||||| |||||| ||||| |||||||||| ||| |||| |||||| || |||||| |||| || |||| ||||| ||||||||||||| |
|
|
| T |
13094311 |
aacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaatatctttacctatacaaattctgggtcctgtgttgaaagctatgaacttgt |
13094410 |
T |
|
| Q |
113 |
aagacggtacatttataatccctcctctcgctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttgctgcatccttcccattgc |
212 |
Q |
| |
|
|||| ||||||| |||||| |||| ||| | ||||||||||| |||||||||||||||| ||| || |||||||||||||| | |||||||||||| | |
|
|
| T |
13094411 |
aagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcagtcttctccccatatttgttccatccttcccataga |
13094510 |
T |
|
| Q |
213 |
atacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggagga |
312 |
Q |
| |
|
||||||||| || || || ||||||||||| |||||||| ||||||||||||||||||||||||||| ||||| | |||| ||| | | ||||||| |
|
|
| T |
13094511 |
atacaaagagtaaattaaagttgtatttggagtaacatggtatccactaggtagtatatcagatttgattgcacagatatgctcaaaaggtacaggagga |
13094610 |
T |
|
| Q |
313 |
aatagccttaaggtttcacatatggctccatgaaggtaaacaagcttatcaag |
365 |
Q |
| |
|
| |||||||||||||||||||| |||||||| ||||| || ||||||||||| |
|
|
| T |
13094611 |
taaagccttaaggtttcacatatagctccatggaggtatactagcttatcaag |
13094663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 22 - 365
Target Start/End: Original strand, 13204380 - 13204723
Alignment:
| Q |
22 |
aacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaatgctatgaacttgtaagacggta |
121 |
Q |
| |
|
||||||| |||||| ||||| |||||||||| ||| ||||||||||| || | ||||||||||||||||| |||||| ||||||||||||||||| |||| |
|
|
| T |
13204380 |
aacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacccaaacaacttctaggacctgtattgaaagctatgaacttgtaagatggta |
13204479 |
T |
|
| Q |
122 |
catttataatccctcctctcgctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttgctgcatccttcccattgcatacaaaga |
221 |
Q |
| |
|
||| |||||| |||| || |||||| |||||| |||||||||||||||| ||| || |||||||||||||| | |||||||||||| || |||||||| |
|
|
| T |
13204480 |
catgtataatgtgtcctgtctctgatacccatctctcaggcttaaattccatgcagtcttctccccatatttgttccatccttcccatagcgtacaaaga |
13204579 |
T |
|
| Q |
222 |
atatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggaggaaatagcctt |
321 |
Q |
| |
|
|| | ||| |||||||||||| |||| | | |||||||||||||||||| |||||||| ||||| | |||| ||| | | ||||||| | || || |
|
|
| T |
13204580 |
gtacaataaccttgtatttggactaacacgctctccactaggtagtatatcggatttgattgcacatatatgctcaaaaggtacaggaggataaagtctc |
13204679 |
T |
|
| Q |
322 |
aaggtttcacatatggctccatgaaggtaaacaagcttatcaag |
365 |
Q |
| |
|
|||| ||||||||| |||||||||||||| || ||||||||||| |
|
|
| T |
13204680 |
aaggcttcacatatagctccatgaaggtacactagcttatcaag |
13204723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 22 - 365
Target Start/End: Complemental strand, 13070447 - 13070104
Alignment:
| Q |
22 |
aacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaatgctatgaacttgtaagacggta |
121 |
Q |
| |
|
||||||| |||||| ||||| |||||||||| ||| ||||||||||| || | ||||||||| ||||||| |||||| ||||||||||||||||| || | |
|
|
| T |
13070447 |
aacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacccaaacaacttctcggacctgtattgaaagctatgaacttgtaagatggaa |
13070348 |
T |
|
| Q |
122 |
catttataatccctcctctcgctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttgctgcatccttcccattgcatacaaaga |
221 |
Q |
| |
|
||| |||||| |||| || |||||| |||||| |||||||||||||||| ||| || |||||||||||||| | |||||||||||| || |||||||| |
|
|
| T |
13070347 |
catgtataatgtgtcctgtctctgatacccatctctcaggcttaaattccatgcagtcttctccccatatttgttccatccttcccatagcgtacaaaga |
13070248 |
T |
|
| Q |
222 |
atatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggaggaaatagcctt |
321 |
Q |
| |
|
|| | ||| |||||||||||| |||| | | |||||||||||||||||| |||||||| ||||| | |||| ||| | | ||||||| | || || |
|
|
| T |
13070247 |
gtacaataaccttgtatttggactaacacgctctccactaggtagtatatcggatttgattgcacatatatgctcaaaaggtacaggaggataaagtctc |
13070148 |
T |
|
| Q |
322 |
aaggtttcacatatggctccatgaaggtaaacaagcttatcaag |
365 |
Q |
| |
|
|||||||||||||| |||||||||||||| || || |||||||| |
|
|
| T |
13070147 |
aaggtttcacatatagctccatgaaggtacactagattatcaag |
13070104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 22 - 365
Target Start/End: Original strand, 13007121 - 13007464
Alignment:
| Q |
22 |
aacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaatgctatgaacttgtaagacggta |
121 |
Q |
| |
|
||||||| ||||| ||||| |||||||||| |||||||| ||| || || ||||||||||||||||||| |||||| ||||||||||||||||| |||| |
|
|
| T |
13007121 |
aacaaagctgctgcgaccatcttcatttgaatgaagctaatatccttgcccatacaacttctaggacctgtattgaaagctatgaacttgtaagatggta |
13007220 |
T |
|
| Q |
122 |
catttataatccctcctctcgctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttgctgcatccttcccattgcatacaaaga |
221 |
Q |
| |
|
||| |||||| ||||||| |||| | |||||| |||||||||||||||| ||| || |||||||||||||| | |||||||||||| || |||||||| |
|
|
| T |
13007221 |
catgtataatgtgtcctctctctgacacccatctctcaggcttaaattccatgcagtcttctccccatatttgttccatccttcccatagcgtacaaaga |
13007320 |
T |
|
| Q |
222 |
atatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggaggaaatagcctt |
321 |
Q |
| |
|
|| | ||| |||||||||||| |||| | | |||||||||||||||||| || ||||| ||||| | |||| ||| | | ||||||| | ||||| |
|
|
| T |
13007321 |
gtacaataaccttgtatttggactaacacgctctccactaggtagtatatcggaattgattgcacagatatgctcaaaaggtacaggaggataaagcctc |
13007420 |
T |
|
| Q |
322 |
aaggtttcacatatggctccatgaaggtaaacaagcttatcaag |
365 |
Q |
| |
|
| || |||||||| |||||||| ||||| || ||||||||||| |
|
|
| T |
13007421 |
atggcttcacatagagctccatggaggtacactagcttatcaag |
13007464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 22 - 365
Target Start/End: Original strand, 13100922 - 13101264
Alignment:
| Q |
22 |
aacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaatgctatgaacttgtaagacggta |
121 |
Q |
| |
|
||||||| |||||| ||||| |||||||||| |||||||| ||| || || |||||||||||||| |||| |||||| ||||||||||||||||| |||| |
|
|
| T |
13100922 |
aacaaagcagctgcgaccatcttcatttgaatgaagctaatatccttacccatacaacttctaggtcctg-attgaaagctatgaacttgtaagatggta |
13101020 |
T |
|
| Q |
122 |
catttataatccctcctctcgctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttgctgcatccttcccattgcatacaaaga |
221 |
Q |
| |
|
||| |||||| ||||||| |||| | |||||| |||||||||||||||| ||| || |||||||||||||| | |||||||||||| || |||||||| |
|
|
| T |
13101021 |
catgtataatgtgtcctctctctgacacccatctctcaggcttaaattccatgcagtcttctccccatatttgttccatccttcccatagcgtacaaaga |
13101120 |
T |
|
| Q |
222 |
atatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggaggaaatagcctt |
321 |
Q |
| |
|
|| | ||| |||||||||||| || | | | ||||||||| |||||||| |||||||| | ||| | |||| ||| | | ||||||| | ||||| |
|
|
| T |
13101121 |
gtacaataaccttgtatttggactaaaacgctctccactaggaagtatatcggatttgattgaacatatatgctcaaaaggtacaggaggataaagcctc |
13101220 |
T |
|
| Q |
322 |
aaggtttcacatatggctccatgaaggtaaacaagcttatcaag |
365 |
Q |
| |
|
|||||||||||||| |||||||| ||||| || ||||||||||| |
|
|
| T |
13101221 |
aaggtttcacatatagctccatggaggtacactagcttatcaag |
13101264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 13 - 365
Target Start/End: Original strand, 13161433 - 13161785
Alignment:
| Q |
13 |
aacttccacaacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaatgctatgaacttgt |
112 |
Q |
| |
|
||||||| ||||||| |||||| ||||| |||||||||| ||| ||||||||||| || |||||| |||| || |||| ||||| | ||||||||||| |
|
|
| T |
13161433 |
aacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgttgaaagatatgaacttgt |
13161532 |
T |
|
| Q |
113 |
aagacggtacatttataatccctcctctcgctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttgctgcatccttcccattgc |
212 |
Q |
| |
|
|||| ||||||| |||||| |||| ||| | ||||||||||| |||||||||||||||| ||| || || ||||||| ||| | |||||| ||||| | |
|
|
| T |
13161533 |
aagaaggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcagtcttccccccatagttgttccatcctgcccataga |
13161632 |
T |
|
| Q |
213 |
atacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggagga |
312 |
Q |
| |
|
||||| ||| || || || |||||||||||| || | | | |||||||||||||||||| |||||||| ||||| | |||| ||| | | ||| ||| |
|
|
| T |
13161633 |
atacatagagtacattaaacttgtatttggactaatacgttctccactaggtagtatatcggatttgattgcacagatatgctcaaaaggtataggtgga |
13161732 |
T |
|
| Q |
313 |
aatagccttaaggtttcacatatggctccatgaaggtaaacaagcttatcaag |
365 |
Q |
| |
|
| |||||||||||||||||||| |||||||| ||||| || ||||||||||| |
|
|
| T |
13161733 |
taaagccttaaggtttcacatatagctccatggaggtatactagcttatcaag |
13161785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 38 - 367
Target Start/End: Complemental strand, 13065468 - 13065139
Alignment:
| Q |
38 |
ccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaatgctatgaacttgtaagacggtacatttataatccctcc |
137 |
Q |
| |
|
|||| ||||||| ||||||| | | |||||| || | ||||||||| || ||||||||||| ||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
13065468 |
ccatcttcatttcaacgaaggtgatatctttacccaaacaacttcttggccctgcattgaaagctatgaacttgtaagacggtacatgtataatttgtcc |
13065369 |
T |
|
| Q |
138 |
tctcgctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttgctgcatccttcccattgcatacaaagaatatatcaactttgta |
237 |
Q |
| |
|
|| |||||||||||| |||||||||||||||| ||| || ||||||||||||| || |||||||||||||| ||||||| | |||| | | ||||| |
|
|
| T |
13065368 |
gctttttgatatccatctctcaggcttaaattccatgcagtcttctccccatattttctccatccttcccattgaatacaaatagtataatatccttgta |
13065269 |
T |
|
| Q |
238 |
tttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggaggaaatagccttaaggtttcacatatgg |
337 |
Q |
| |
|
||||||| |||||| ||||||||| |||||||||| |||||| ||| |||| |||| | | | ||||||| | |||||||||| ||||||||| | |
|
|
| T |
13065268 |
tttggacttacatggactccactaggaagtatatcagctttgattgcaaacttttgctcgataggtacaggaggataaagccttaaggcttcacatatag |
13065169 |
T |
|
| Q |
338 |
ctccatgaaggtaaacaagcttatcaagct |
367 |
Q |
| |
|
|||| || ||||||| || |||||||||| |
|
|
| T |
13065168 |
ctccgtggaggtaaattagtttatcaagct |
13065139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 369 - 419
Target Start/End: Complemental strand, 13244251 - 13244201
Alignment:
| Q |
369 |
tttccctctttcccaatccttctttcattagttcttttagcaggcaataac |
419 |
Q |
| |
|
|||||| ||||||||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
13244251 |
tttccccctttcccaatctttccttcattagttcttttagcaggcaataac |
13244201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 415
Target Start/End: Complemental strand, 12963644 - 12963598
Alignment:
| Q |
369 |
tttccctctttcccaatccttctttcattagttcttttagcaggcaa |
415 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
12963644 |
tttccccctttcccaatccttccttcattagatcttttagcaggcaa |
12963598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 418
Target Start/End: Complemental strand, 19278894 - 19278852
Alignment:
| Q |
376 |
ctttcccaatccttctttcattagttcttttagcaggcaataa |
418 |
Q |
| |
|
||||||||||| ||| |||||||||||||||| |||||||||| |
|
|
| T |
19278894 |
ctttcccaatctttccttcattagttcttttaccaggcaataa |
19278852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 31380342 - 31380253
Alignment:
| Q |
22 |
aacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaatgctatgaacttg |
111 |
Q |
| |
|
||||||||||| ||| ||| || ||||||| ||| ||||||||||| ||||||||||||| || |||| |||||| | |||||||||| |
|
|
| T |
31380342 |
aacaaagaagccgcagacatcttaatttgaatgaaactaagatctttaccaatacaacttccgggtcctgtattgaaagatatgaacttg |
31380253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 211
Target Start/End: Original strand, 36668115 - 36668235
Alignment:
| Q |
91 |
gcattgaatgctatgaacttgtaagacggtacatttataatccctcctctcgctgatatccatctttcaggcttaaattccaagcaatcatctccccata |
190 |
Q |
| |
|
|||||||| || |||||||||||||| ||||||| || |||||||| || || | ||| || || || ||||||||||||||||| |||||||||| |
|
|
| T |
36668115 |
gcattgaaagcaatgaacttgtaagaaggtacatgaattgtccctcctttcttagaaacccacctctctggtttaaattccaagcaatcttctccccata |
36668214 |
T |
|
| Q |
191 |
tttgctgcatccttcccattg |
211 |
Q |
| |
|
||| || || |||||| |||| |
|
|
| T |
36668215 |
tttcctccacccttccaattg |
36668235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 193
Target Start/End: Original strand, 12164206 - 12164365
Alignment:
| Q |
34 |
gcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaatgctatgaacttgtaagacggtacatttataatcc |
133 |
Q |
| |
|
|||||||||||||| | || |||||| | ||| || || | |||||| || || || ||||| || || |||||||||||||| || |||| | |||| |
|
|
| T |
12164206 |
gcaaccattttcatctcaatgaagcttatatccttacccaaacaactccttggtccagcattaaaagcaatgaacttgtaagaaggaacataaactatcc |
12164305 |
T |
|
| Q |
134 |
ctcctctcgctgatatccatctttcaggcttaaattccaagcaatcatctccccatattt |
193 |
Q |
| |
|
||||| | || ||||| || || |||||||||||||||||||| ||||||||||||| |
|
|
| T |
12164306 |
ctcctttttgagaaatccacctctctggcttaaattccaagcaatcttctccccatattt |
12164365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 193
Target Start/End: Original strand, 12175731 - 12175890
Alignment:
| Q |
34 |
gcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaatgctatgaacttgtaagacggtacatttataatcc |
133 |
Q |
| |
|
|||||||||||||| | || |||||| | ||| || || | |||||| || || || |||||||| || |||||||||||||| || |||| || |||| |
|
|
| T |
12175731 |
gcaaccattttcatctcaatgaagcttatatccttacccaaacaactccttggtccagcattgaaagcaatgaacttgtaagagggaacatgaattatcc |
12175830 |
T |
|
| Q |
134 |
ctcctctcgctgatatccatctttcaggcttaaattccaagcaatcatctccccatattt |
193 |
Q |
| |
|
||||| || || ||||| || || || ||||||| ||| ||||| ||||||||||||| |
|
|
| T |
12175831 |
ctcctttcttagaaatccacctctctggtttaaatttcaaacaatcttctccccatattt |
12175890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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