View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18491_high_30 (Length: 271)
Name: NF18491_high_30
Description: NF18491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18491_high_30 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 1450706 - 1450436
Alignment:
| Q |
1 |
aatttttctagtaacatttagaacctgcagagatggatacagagagtgctcttgaaattgtagcactcttaaggagttcatgttcaggatctgaattagg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1450706 |
aatttttctagtaacatttagaacctgcagagatggatacagagagtgctcttgaaattgtagcactcttaaggagttcatgttcaggatctgaattagg |
1450607 |
T |
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| Q |
101 |
acttccagcaaggatccgtctacattggtattgaaatttaacactgaaaatgagattgatatttccaaacattaaaaagagtagactatcaattcgagtg |
200 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1450606 |
acttccagcaaggatccgtctacactggtattgaaatttaacactgaaaatgagattgatatttccaaacattaaaaagagtagactatcaattcgagtg |
1450507 |
T |
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| Q |
201 |
aagtataaaaagattttctttgatgaacgagaactactgatccgaaatggactgaagaggttggctgaact |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1450506 |
aagtataaaaagattttctttgatgaacgagaactactgatccgaaatggactgaagaggttggctgaact |
1450436 |
T |
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