View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18491_low_19 (Length: 335)
Name: NF18491_low_19
Description: NF18491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18491_low_19 |
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Alignment Details
Target: chr2 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 2812974 - 2813291
Alignment:
| Q |
1 |
tgatagggaagcattatcctatggatggagaatggcaaggcatccaagagttcatctcactgtgatgcatttcgtttcaggaaaagatgtaactgaatcg |
100 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
2812974 |
tgatagggaagcattatcctatggatggagaatgtcaaggcatccaagagttcatctcactgtgatgcatttcatttcaggaaaagatgtaactgaatcg |
2813073 |
T |
|
| Q |
101 |
ttaatcgacgatgaactactagataaccaaagaagtacaatttcaaacaaaatagatgaggaatgtataaatgagataaagatgctagctacatgtgatg |
200 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2813074 |
ttaatcgacgatgaactactagacaaccaaagaagtacaatttcaaacaaaatagatgaggaatgtataaatgagataaagatgctagctacatgtgatg |
2813173 |
T |
|
| Q |
201 |
tatcaattaattacatagagaaaattgtgagtaatggagagcaaacagtttcggcgataagagaaacaaacaatgctaatgacttattcatagttgggag |
300 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2813174 |
tatcaattaaatacatagagaaaattgtgagtaatggagagcaaacagtttcggcgataagagaaacaaacaatgctaatgacttattcatagttgggag |
2813273 |
T |
|
| Q |
301 |
aggtcagggagattcttc |
318 |
Q |
| |
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|||||||||||||||||| |
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| T |
2813274 |
aggtcagggagattcttc |
2813291 |
T |
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