View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18491_low_4 (Length: 674)

Name: NF18491_low_4
Description: NF18491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18491_low_4
NF18491_low_4
[»] chr7 (20 HSPs)
chr7 (51-656)||(4306516-4307129)
chr7 (98-346)||(9736879-9737129)
chr7 (98-346)||(14644482-14644732)
chr7 (98-337)||(7592947-7593190)
chr7 (98-346)||(14634782-14635032)
chr7 (98-346)||(33292181-33292431)
chr7 (98-346)||(15947377-15947627)
chr7 (98-337)||(15174481-15174724)
chr7 (104-280)||(19352599-19352774)
chr7 (98-360)||(32817917-32818179)
chr7 (104-366)||(11634340-11634603)
chr7 (246-362)||(48711432-48711550)
chr7 (403-500)||(11634643-11634741)
chr7 (98-175)||(13874492-13874568)
chr7 (286-346)||(28344139-28344200)
chr7 (306-337)||(14777367-14777398)
chr7 (306-337)||(15229505-15229536)
chr7 (98-175)||(14777518-14777596)
chr7 (98-175)||(15229656-15229734)
chr7 (118-177)||(48710031-48710091)
[»] chr1 (13 HSPs)
chr1 (98-342)||(26906250-26906493)
chr1 (129-362)||(21633500-21633732)
chr1 (98-346)||(14272022-14272272)
chr1 (98-346)||(14281888-14282138)
chr1 (41-326)||(28309963-28310236)
chr1 (98-321)||(5378428-5378654)
chr1 (140-302)||(30676766-30676930)
chr1 (98-175)||(21919435-21919512)
chr1 (140-326)||(15810030-15810217)
chr1 (109-280)||(40999050-40999221)
chr1 (215-346)||(3471058-3471191)
chr1 (441-523)||(21633337-21633420)
chr1 (308-355)||(21919580-21919626)
[»] chr4 (16 HSPs)
chr4 (71-365)||(23622845-23623127)
chr4 (98-337)||(3242291-3242534)
chr4 (98-337)||(54689917-54690160)
chr4 (98-337)||(54699348-54699591)
chr4 (558-658)||(47605855-47605955)
chr4 (98-346)||(20884453-20884703)
chr4 (98-337)||(26812449-26812692)
chr4 (98-337)||(26821916-26822159)
chr4 (98-280)||(3918069-3918250)
chr4 (98-280)||(37059089-37059270)
chr4 (98-360)||(50516502-50516764)
chr4 (204-364)||(16489950-16490101)
chr4 (98-280)||(15842902-15843083)
chr4 (129-346)||(11482248-11482467)
chr4 (98-196)||(18125416-18125514)
chr4 (130-229)||(45609499-45609598)
[»] chr5 (33 HSPs)
chr5 (98-362)||(42732581-42732842)
chr5 (129-337)||(31150670-31150868)
chr5 (129-337)||(5600532-5600730)
chr5 (129-337)||(5610178-5610376)
chr5 (98-337)||(24422218-24422461)
chr5 (98-337)||(30444833-30445076)
chr5 (98-346)||(11223309-11223558)
chr5 (98-337)||(24412769-24413012)
chr5 (132-362)||(26652541-26652768)
chr5 (132-362)||(26924126-26924353)
chr5 (98-337)||(30454205-30454448)
chr5 (98-280)||(18569042-18569223)
chr5 (98-346)||(33955504-33955754)
chr5 (98-337)||(30459263-30459506)
chr5 (98-337)||(22489126-22489369)
chr5 (104-346)||(20035932-20036176)
chr5 (97-346)||(20834364-20834615)
chr5 (98-177)||(22448334-22448413)
chr5 (132-257)||(22118140-22118265)
chr5 (98-337)||(13815377-13815617)
chr5 (104-366)||(24244053-24244316)
chr5 (104-366)||(24290677-24290940)
chr5 (403-500)||(24290980-24291078)
chr5 (98-178)||(37514863-37514943)
chr5 (403-490)||(13815686-13815772)
chr5 (403-500)||(24244356-24244454)
chr5 (98-280)||(4635948-4636129)
chr5 (130-175)||(1693703-1693748)
chr5 (129-277)||(16110887-16111037)
chr5 (308-355)||(22457797-22457843)
chr5 (130-175)||(17553829-17553874)
chr5 (237-337)||(17553934-17554025)
chr5 (308-355)||(22448479-22448525)
[»] chr8 (33 HSPs)
chr8 (98-362)||(31575415-31575676)
chr8 (87-280)||(15833953-15834145)
chr8 (98-346)||(42712182-42712432)
chr8 (98-346)||(12925287-12925537)
chr8 (98-346)||(20030112-20030362)
chr8 (84-337)||(7789068-7789325)
chr8 (98-346)||(20044751-20045001)
chr8 (98-280)||(20714072-20714253)
chr8 (98-366)||(18883164-18883433)
chr8 (98-366)||(18143433-18143702)
chr8 (98-337)||(25051067-25051307)
chr8 (104-366)||(18251743-18252006)
chr8 (402-490)||(18143741-18143828)
chr8 (98-337)||(25037030-25037270)
chr8 (104-177)||(4843732-4843805)
chr8 (140-346)||(12767564-12767772)
chr8 (104-177)||(18233031-18233104)
chr8 (104-177)||(18242482-18242555)
chr8 (403-500)||(18232703-18232801)
chr8 (403-500)||(18242154-18242252)
chr8 (403-500)||(18251605-18251703)
chr8 (98-177)||(12915563-12915642)
chr8 (98-175)||(33592138-33592215)
chr8 (98-175)||(33601777-33601854)
chr8 (98-235)||(24096079-24096217)
chr8 (403-465)||(25037339-25037400)
chr8 (403-465)||(25051376-25051437)
chr8 (403-488)||(18883473-18883557)
chr8 (132-235)||(24634014-24634117)
chr8 (289-366)||(18232841-18232917)
chr8 (289-366)||(18242292-18242368)
chr8 (129-174)||(42896184-42896229)
chr8 (289-337)||(4843921-4843968)
[»] chr3 (20 HSPs)
chr3 (71-365)||(54624581-54624863)
chr3 (71-337)||(17529838-17530094)
chr3 (69-294)||(32877856-32878080)
chr3 (129-337)||(48978622-48978816)
chr3 (129-337)||(48988162-48988356)
chr3 (42-337)||(19388712-19389002)
chr3 (98-337)||(24794550-24794793)
chr3 (98-337)||(28367657-28367900)
chr3 (98-337)||(28375475-28375718)
chr3 (98-337)||(28383297-28383540)
chr3 (98-337)||(28351724-28351967)
chr3 (98-346)||(5385623-5385873)
chr3 (129-280)||(38529212-38529362)
chr3 (88-346)||(13328272-13328532)
chr3 (129-346)||(46305609-46305827)
chr3 (98-335)||(4951537-4951777)
chr3 (140-346)||(23486974-23487182)
chr3 (98-196)||(4361520-4361618)
chr3 (186-321)||(7784100-7784237)
chr3 (306-337)||(17535002-17535033)
[»] scaffold0021 (4 HSPs)
scaffold0021 (71-365)||(99909-100191)
scaffold0021 (215-346)||(143102-143235)
scaffold0021 (98-280)||(124050-124230)
scaffold0021 (306-365)||(180832-180889)
[»] chr2 (12 HSPs)
chr2 (129-337)||(1800445-1800643)
chr2 (71-337)||(22632354-22632610)
chr2 (129-337)||(1790951-1791145)
chr2 (104-346)||(35877449-35877693)
chr2 (104-346)||(35884938-35885182)
chr2 (104-346)||(36724651-36724895)
chr2 (98-280)||(31710470-31710651)
chr2 (104-280)||(24022752-24022927)
chr2 (98-346)||(3396856-3397106)
chr2 (98-337)||(14273146-14273388)
chr2 (109-177)||(16446668-16446736)
chr2 (441-490)||(20011878-20011925)
[»] scaffold0247 (1 HSPs)
scaffold0247 (131-364)||(24520-24741)
[»] scaffold0269 (1 HSPs)
scaffold0269 (71-283)||(14791-15002)
[»] chr6 (11 HSPs)
chr6 (154-365)||(12414990-12415189)
chr6 (98-337)||(23895620-23895863)
chr6 (98-346)||(22066226-22066476)
chr6 (98-346)||(23884425-23884675)
chr6 (98-262)||(10259783-10259946)
chr6 (98-255)||(11421455-11421611)
chr6 (104-229)||(12173473-12173598)
chr6 (109-337)||(18420492-18420724)
chr6 (131-280)||(23110256-23110404)
chr6 (109-346)||(17512238-17512476)
chr6 (109-280)||(14102309-14102480)
[»] scaffold0028 (2 HSPs)
scaffold0028 (98-337)||(94435-94678)
scaffold0028 (98-337)||(103876-104119)
[»] scaffold0206 (1 HSPs)
scaffold0206 (98-346)||(2042-2292)
[»] scaffold0482 (1 HSPs)
scaffold0482 (84-337)||(3474-3731)
[»] scaffold0223 (1 HSPs)
scaffold0223 (107-322)||(27066-27289)
[»] scaffold0040 (2 HSPs)
scaffold0040 (98-337)||(30827-31070)
scaffold0040 (98-280)||(10045-10225)
[»] scaffold0001 (1 HSPs)
scaffold0001 (98-337)||(408269-408512)
[»] scaffold0010 (2 HSPs)
scaffold0010 (98-337)||(256901-257141)
scaffold0010 (403-488)||(256748-256832)
[»] scaffold0053 (2 HSPs)
scaffold0053 (98-177)||(2265-2344)
scaffold0053 (308-357)||(2410-2458)
[»] scaffold0334 (1 HSPs)
scaffold0334 (104-175)||(12558-12629)
[»] scaffold0101 (1 HSPs)
scaffold0101 (286-322)||(42161-42197)


Alignment Details
Target: chr7 (Bit Score: 160; Significance: 6e-85; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 51 - 656
Target Start/End: Original strand, 4306516 - 4307129
Alignment:
51 tgtgaaatgtgttaaatgaaaaataaagagatgagagaagaatgatcacacaagagatttatcctgattcactaaattcggctacttctagtccccacac 150  Q
    |||||||| |||||||  |||||||||||||||||||||||| |||||||||| |||||||||||  ||||| |||  | |||||||| ||| |||||||    
4306516 tgtgaaatatgttaaac-aaaaataaagagatgagagaagaaagatcacacaaaagatttatcctagttcaccaaagccagctacttccagttcccacac 4306614  T
151 tttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtat 250  Q
    || | |||||||| || | |||||||||    |||||||||||| ||||||| |||||   |||||||||||||||||| ||||||||||||||||||||    
4306615 ttcgagtgagattttctactatagtatccaactatcagaaacttatgaatagcactatg--ttgttgatcacaccagatcagtccgattacactctgtat 4306712  T
251 tatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagcttt 350  Q
    |||||||||||  || ||| ||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| | |||||| |||    
4306713 tatcaacctcagcagacttctacaattattgatcacacaagaaaggttggaacaactctatatcaaactattaagcccaatagacttgaaacctag-ttt 4306811  T
351 acactttgtatggtgannnnnnnnggtaagagaaataatatct----cagaagatattttacaaacacaaactcaaatagata--gagagacaagtaaat 444  Q
    ||||||||||||||||        ||| ||| |||| ||||||    || |||| |||||||||| |||||||| || |||||  ||||||||   ||||    
4306812 acactttgtatggtgatttgttttggttaga-aaatgatatctcaaacaaaagagattttacaaatacaaactc-aagagataatgagagaca---aaat 4306906  T
445 atagtgagagcttatggagtttgcttatatttgttgaagagcttga--gagagaatgaaggctttttgctttgagagagattga-------aagctttgt 535  Q
    |||||||||| |||||||||||| |||| |||||||||||  ||||  ||||||||||   | | | ||||  |||||||  ||       |||||||||    
4306907 atagtgagagattatggagtttgtttatgtttgttgaagatattgattgagagaatgatttc-tatagcttctagagagagagagatatagaagctttgt 4307005  T
536 gtgt---aaactcttgccattcttcttcacatccttcctgtattcatagggatagagagacttgatccctacttcatgaaacagctatcatgctttaatt 632  Q
    || |   ||||||||||  |||| ||||||| ||||| |||||| |||||||  |||||| |||||||| ||||||| ||||| || | ||| |||||||    
4307006 gtatttcaaactcttgcatttctccttcacagccttcatgtatttatagggaatgagagatttgatccccacttcataaaacaactgttatgttttaatt 4307105  T
633 caaaaatgatttgagctccaaaat 656  Q
    ||||  ||||||| ||||| ||||    
4307106 caaatgtgatttgcgctccgaaat 4307129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 98 - 346
Target Start/End: Complemental strand, 9737129 - 9736879
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| |||||||||  |||||||||| ||||||||||||| ||||||||||||||||||||||||   |||   ||||||||||     
9737129 acacaggagagttatcctggttcactaaacccggctacttccagtccccacacttcgtgtgagattatccattatagtattcagtttgtagaaacttcta 9737030  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 294  Q
    |  |  |||||||    ||||||||||||||| |||| |  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
9737029 accaacactataaggccttgatcacaccagatcagtctg--tagcccctgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 9736932  T
295 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
9736931 ggttggaacttttcctatctcaaactattaagcccaatagacttgagatctag 9736879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 98 - 346
Target Start/End: Original strand, 14644482 - 14644732
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
14644482 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 14644581  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 294  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
14644582 accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 14644679  T
295 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
14644680 ggttggaacttttcctatctcaaactattaagcccaatagacttgagatctag 14644732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 98 - 337
Target Start/End: Complemental strand, 7593190 - 7592947
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    |||||||||| |||||||| ||||| |||   ||||||||| ||||||||||| | ||||||||||||||||||||| | || || || |||||||||||    
7593190 acacaagagagttatcctggttcaccaaacctggctacttccagtccccacacctcgtgtgagattatccattatagttttcttgctaacagaaacttct 7593091  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||| | ||||||||||||||| |||||| | |||| |||||||||||||||||  |||||| |||||||| |||  ||    || |||    
7593090 gactagcactacaatatcttgatcacaccagatcagtccg-taacac-ctgtattatcaacctcatcaggcttatacaattctttgcacactagcaaaag 7592993  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
7592992 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 7592947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 98 - 346
Target Start/End: Original strand, 14634782 - 14635032
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   | |   ||||||||||     
14634782 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagctggtagaaacttcta 14634881  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 294  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
14634882 accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 14634979  T
295 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
14634980 ggttggaacttttcctatctcaaactattaagcccaatagacttgagatctag 14635032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 98 - 346
Target Start/End: Original strand, 33292181 - 33292431
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
33292181 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 33292280  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 294  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
33292281 accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 33292378  T
295 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||||||||  || ||||||||||||||| |||||||||||||| ||| ||||    
33292379 ggttggaactcttcctatctcaaactattgagcccaatagacttgagatctag 33292431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 98 - 346
Target Start/End: Original strand, 15947377 - 15947627
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| |||| |||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
15947377 acacaggagagttatcctggttcaccaaacccggctacttccagtcaccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 15947476  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 294  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
15947477 accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 15947574  T
295 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||||||||  || |||||||||||||||||||||||||| ||| ||| ||||    
15947575 ggttggaactcttcctatctcaaactattaagcccaatagccttgagatctag 15947627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 98 - 337
Target Start/End: Complemental strand, 15174724 - 15174481
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| ||||||||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || || ||||||||    
15174724 acacaggagatttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacaaaaacttct 15174625  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||  | ||||||||||||||| |||||| |||||| |||||||||||||||||  |||||| || ||||| |||  ||    || |||    
15174624 gactagcactacaagatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcagcaggcttatataattctttgcacactagcaaaag 15174527  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
15174526 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 15174481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 104 - 280
Target Start/End: Original strand, 19352599 - 19352774
Alignment:
104 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 203  Q
    |||| |||| ||| ||||| ||||||||||||||| ||||| ||||||| ||||||||||||||| |||||| || || || ||||||||||||| | |     
19352599 gagagttatactggttcaccaaattcggctacttccagtcctcacacttcgtgtgagattatccactatagtctcctgctaacagaaacttctgacttgt 19352698  T
204 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 280  Q
    ||||||| ||  ||||||||||||||   |||| |||||| ||||||||| |||||||  |||||| |||| |||||    
19352699 actataaattcctgatcacaccagatctttccg-ttacaccctgtattatgaacctcatcaggcttctacacttctt 19352774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 98 - 360
Target Start/End: Complemental strand, 32818179 - 32817917
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||||| |||  ||||||||||  |||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
32818179 acacaggagagttatcctggttcaccaaacccggctacttccggtccccacacttcgtgtgagattatccactatagtattcagttggtagaaacttcta 32818080  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattct---tgatcacacaagaaa 294  Q
    |  |  |||||||  | ||||||||||||||| |||| |  ||  | ||||||||||||||||   |||||| ||||||| |   |  || |||||||||    
32818079 accaacactataaggtcttgatcacaccagatcagtctg--taacccctgtattatcaacctccgcaggcttctacaattttttgttttcgcacaagaaa 32817982  T
295 ggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgta 360  Q
    |||| ||||  | |||||| ||||||||||||||||||||||| ||| |||| |||||||||||||    
32817981 ggttcgaactttcctatcttaaactattaagcccaatagacttgagatctag-tttacactttgta 32817917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 104 - 366
Target Start/End: Original strand, 11634340 - 11634603
Alignment:
104 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 203  Q
    |||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||  ||||||||||| |  |      
11634340 gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggcagaaacttctaaccaac 11634439  T
204 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaaaggttg 299  Q
    |||||||  | ||||||||||| ||| |||  |  ||  |||||||||||||||||||  |||||| |||||||||||     |  || |||||||||||    
11634440 actataacgtcttgatcacacccgatcagtttg--taacctctgtattatcaacctcagcaggcttcttacaattctttgcactagcaaaagaaaggttg 11634537  T
300 gaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga 366  Q
    |||   ||||||||||||||||| |||||||||||||| ||| |||   | || |||||||||||||    
11634538 gaa-ttttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga 11634603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 246 - 362
Target Start/End: Original strand, 48711432 - 48711550
Alignment:
246 tgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagac 342  Q
    ||||||||||||||||| |||||| || |||||||     ||||||||||||||||  |||  ||||||||||||||||||||| |||||||||| ||||    
48711432 tgtattatcaacctcaacaggcttctataattctttgctttcacacaagaaaggttaaaacttttctatctcaaactattaagcacaatagacttgagac 48711531  T
343 ctagctttacactttgtatg 362  Q
    ||||  ||||||||||||||    
48711532 ctag-attacactttgtatg 48711550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 403 - 500
Target Start/End: Original strand, 11634643 - 11634741
Alignment:
403 ttttacaaacacaaactcaaatagatagagagacaagtaaatatagtgagagcttatggagtttgcttatatttgttgaagagcttga--gagagaatga 500  Q
    ||||||||||||||||||||| |||||  || |||| |||||||||||| |||||||||||||||  | | |||||||||||||||||  ||||||||||    
11634643 ttttacaaacacaaactcaaagagataatgatacaa-taaatatagtgaaagcttatggagtttgaatgtgtttgttgaagagcttgattgagagaatga 11634741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 13874568 - 13874492
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagt 175  Q
    ||||| |||| |||||||| |||||  ||| || ||||||| ||||||||||||| ||||||||||||||| ||||||    
13874568 acacaggagagttatcctggttcacccaatccg-ctacttccagtccccacacttcgtgtgagattatccactatagt 13874492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 28344200 - 28344139
Alignment:
286 cacaagaaaggttggaacaattc-tatctcaaactattaagcccaatagacttaagacctag 346  Q
    ||||||||||| ||||||  ||| ||||||||||||||||||||||||||||| ||| ||||    
28344200 cacaagaaaggctggaactcttcctatctcaaactattaagcccaatagacttgagatctag 28344139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 306 - 337
Target Start/End: Complemental strand, 14777398 - 14777367
Alignment:
306 ttctatctcaaactattaagcccaatagactt 337  Q
    ||||||||||||||||||||||||||||||||    
14777398 ttctatctcaaactattaagcccaatagactt 14777367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 306 - 337
Target Start/End: Complemental strand, 15229536 - 15229505
Alignment:
306 ttctatctcaaactattaagcccaatagactt 337  Q
    ||||||||||||||||||||||||||||||||    
15229536 ttctatctcaaactattaagcccaatagactt 15229505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 14777596 - 14777518
Alignment:
98 acacaagagatttatcctgattcactaaat-tcggctacttctagtccccacactttgtgtgagattatccattatagt 175  Q
    |||||||| |||||||||  |||||  ||| | |||||| |||||| |||||||||||||||||||| |||| ||||||    
14777596 acacaagatatttatcctagttcacccaatgtgggctacgtctagttcccacactttgtgtgagattttccactatagt 14777518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 15229734 - 15229656
Alignment:
98 acacaagagatttatcctgattcactaaat-tcggctacttctagtccccacactttgtgtgagattatccattatagt 175  Q
    |||||||| |||||||||  |||||  ||| | |||||| |||||| |||||||||||||||||||| |||| ||||||    
15229734 acacaagatatttatcctagttcacccaatgtgggctacgtctagttcccacactttgtgtgagattttccactatagt 15229656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 48710031 - 48710091
Alignment:
118 ttcactaaattcggctacttctagtcccc-acactttgtgtgagattatccattatagtat 177  Q
    ||||| ||| |||| |||||| ||||||| |||||| ||||||||||||||| ||||||||    
48710031 ttcaccaaactcggatacttccagtcccccacacttcgtgtgagattatccactatagtat 48710091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 2e-66; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 98 - 342
Target Start/End: Original strand, 26906250 - 26906493
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| ||||||||||||| ||||| |||   |||||||||||||||||| || | |||||||||||||||||||| |||| ||||| ||||||||||||    
26906250 acacacgagatttatcctggttcaccaaaccaggctacttctagtccccatacctcgtgtgagattatccattataatatcttgttaacagaaacttctg 26906349  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggt 297  Q
    | ||| ||||||| || ||| ||||||||||| |||| | ||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||    
26906350 actagcactataagttcttggtcacaccagatcagtctg-ttacactctgtattatcaacctcagcagacttttacaattcttgatcacacaagaaaggt 26906448  T
298 tggaacaattctatctcaaactattaagcccaatagacttaagac 342  Q
    |||||||||||| ||||||||||||| | | ||||||||| ||||    
26906449 tggaacaattctttctcaaactattatgacaaatagacttgagac 26906493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 129 - 362
Target Start/End: Complemental strand, 21633732 - 21633500
Alignment:
129 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 228  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||||||  |  ||  |||||||||||| ||| | |||||  | ||| ||||||||||    
21633732 cggctacgtctagtccccacactttttgtgagattatccactatagtattctactagtagaaacttctgactagcattataaggtcttggtcacaccaga 21633633  T
229 taagtccgattacactctgtattatcaacctcaataggcttttacaattcttg--atcacacaagaaaggttggaacaattctatctcaaactattaagc 326  Q
    | ||||||   |||  |||||||||||||||||  |||||| || | | ||||   |||||||||||| ||||||||  |||||||||||||||||| ||    
21633632 tcagtccgga-acaa-ctgtattatcaacctcagcaggcttctaaattccttgctttcacacaagaaatgttggaacttttctatctcaaactattatgc 21633535  T
327 ccaatagacttaagacctagctttacactttgtatg 362  Q
    ||||||||||| ||||||||  ||||||||||||||    
21633534 ccaatagacttgagacctag-attacactttgtatg 21633500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 98 - 346
Target Start/End: Original strand, 14272022 - 14272272
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
14272022 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 14272121  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 294  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||| ||||    
14272122 acaaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaggaaa 14272219  T
295 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
     ||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
14272220 tgttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 14272272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 98 - 346
Target Start/End: Original strand, 14281888 - 14282138
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
14281888 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 14281987  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 294  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||| ||||    
14281988 acaaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaggaaa 14282085  T
295 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
     ||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
14282086 tgttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 14282138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 41 - 326
Target Start/End: Original strand, 28309963 - 28310236
Alignment:
41 agtgatagtgtgtgaaatgtgttaaatgaaaaataaagagatgagagaagaatgatcacacaagagatttatcctgattcactaaattcggctacttcta 140  Q
    |||||||||||||||| |||||||||  |||||||| |||||| |||||||   |  |||||||||||||||||||||||||  ||  ||||||||||      
28309963 agtgatagtgtgtgaagtgtgttaaacaaaaaataa-gagatgggagaagagaaagaacacaagagatttatcctgattcacctaac-cggctacttccg 28310060  T
141 gtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgatta 240  Q
    ||  |||||||  |||||   ||||||| ||||||||| || ||||| ||||||| |||||  ||||||| |||||||||||||||||| |||||| |||    
28310061 gtttccacactacgtgtgg--ttatccactatagtatcctgctatcaaaaacttccgaataacactataagttgttgatcacaccagatcagtccg-tta 28310157  T
241 cactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttgga-acaattctatctcaaactattaagc 326  Q
    || |||||||||| | ||| || ||||        ||||||||||| ||| |||||||| | ||||  |||||||||||||||||||    
28310158 cagtctgtattattacccttaacaggc--------ttcttgatcactcaaaaaaggttgaacacaaccctatctcaaactattaagc 28310236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 98 - 321
Target Start/End: Original strand, 5378428 - 5378654
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
5378428 acacaggagaattatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttct 5378527  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaa 293  Q
     | ||| |||||||  | ||||||||||||||| |||| | |||||| || |||||| |||||||  || ||| ||||||||||     || ||||||||    
5378528 aactagcactataaggtcttgatcacaccagatcagtctg-ttacaccctatattataaacctcagcagacttctacaattctttgctttcgcacaagaa 5378626  T
294 aggttggaacaattctatctcaaactat 321  Q
    ||||||  |||||||| |||||||||||    
5378627 aggttgttacaattctttctcaaactat 5378654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 140 - 302
Target Start/End: Complemental strand, 30676930 - 30676766
Alignment:
140 agtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgatt 239  Q
    ||||||||||||| |||||||||||||||||| | |||   | ||| |||||||| ||||||| ||||||  || |||||||||| |||| |||| | ||    
30676930 agtccccacacttcgtgtgagattatccattacaatattcagctataagaaacttatgaatagcactatatgttcttgatcacacaagatcagtctg-tt 30676832  T
240 acactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaaggttggaa 302  Q
    ||||||||||||||||| ||||| |  ||| || |||||||     ||||||||||||||||||||    
30676831 acactctgtattatcaatctcaacatacttatataattctttgctttcacacaagaaaggttggaa 30676766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 21919435 - 21919512
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagt 175  Q
    ||||| |||| ||||||||||||||  ||| |||||||||| ||||||||||||| ||||||||||||||| ||||||    
21919435 acacaggagagttatcctgattcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagt 21919512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 326
Target Start/End: Original strand, 15810030 - 15810217
Alignment:
140 agtccccacactttgtgtgagattatccattatagt-atcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgat 238  Q
    ||||||||||| | ||||||||||||||| |||| | ||| || || ||||||||||||| ||| |||||||  | ||||||||||||||| |||||| |    
15810030 agtccccacacctcgtgtgagattatccactataattatcttggtaacagaaacttctgagtagcactataaggtcttgatcacaccagatcagtccg-t 15810128  T
239 tacactctgtattatcaacctcaataggcttttacaattc-ttgatc--acacaagaaaggttggaacaattctatctcaaactattaagc 326  Q
    ||||| ||||||||||||| ||   | |||| |||||||| |||| |   || ||||||||||||||   |||||||||||||||||||||    
15810129 tacac-ctgtattatcaacttcggcatgcttctacaattctttgaaccagcaaaagaaaggttggaa-ttttctatctcaaactattaagc 15810217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 109 - 280
Target Start/End: Original strand, 40999050 - 40999221
Alignment:
109 ttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttctgaatagaacta 207  Q
    |||||||| ||||| |||  || | ||||| ||||||||||| | ||||||||||||||| ||||| | || || || | ||||||| ||| ||| ||||    
40999050 ttatcctggttcaccaaacccgacaacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacggaaacttatgactagcacta 40999149  T
208 taatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 280  Q
    |||  | ||||||||||||||| |||  | ||||||  ||||||||||||||||| || ||| ||||||||||    
40999150 taaggttttgatcacaccagatcagtttg-ttacaccatgtattatcaacctcaacagacttctacaattctt 40999221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 215 - 346
Target Start/End: Original strand, 3471058 - 3471191
Alignment:
215 ttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttggaacaattc-ta 310  Q
    ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || ||||||||||||| ||||  ||| ||    
3471058 ttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttagaactcttccta 3471155  T
311 tctcaaactattaagcccaatagacttaagacctag 346  Q
    |||||||||||||| |||||||||||| ||| ||||    
3471156 tctcaaactattaaacccaatagacttgagatctag 3471191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 441 - 523
Target Start/End: Complemental strand, 21633420 - 21633337
Alignment:
441 aaatatagtgagagcttatggagtttgcttatatttgttgaagagcttg--agagagaatgaaggctttttgctttgagagagat 523  Q
    |||||||||||||| |||||||||||| || | |||||| |||||||||  |||||||||||  || ||||||||||||||||||    
21633420 aaatatagtgagagattatggagtttgtttgtgtttgttaaagagcttgatagagagaatgattgc-ttttgctttgagagagat 21633337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 21919580 - 21919626
Alignment:
308 ctatctcaaactattaagcccaatagacttaagacctagctttacact 355  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||    
21919580 ctatctcaaactattaagcccaatagacttgagaactag-tttacact 21919626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 1e-61; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 71 - 365
Target Start/End: Complemental strand, 23623127 - 23622845
Alignment:
71 aaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat 169  Q
    |||| ||||||||||||||||| ||  |||||||||| ||||||||| ||| |  ||  ||||||| || ||||||||||||  |||||||||||||||     
23623127 aaattaagagatgagagaagaaagagaacacaagagaatttatcctggttcgcctaac-cggctacgtccagtccccacactacgtgtgagattatccac 23623029  T
170 tatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt 269  Q
    ||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||||  ||||||    
23623028 tatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccagatcagtctg-ttacactctgtattatcaacctcagcaggctt 23622930  T
270 ttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtg 365  Q
     ||| ||||||||||||||||||||         | |||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||||||    
23622929 ctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagcccaatagacttgagatctag--ttacactttgtatggtg 23622845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 3242291 - 3242534
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
3242291 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 3242390  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||||| ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
3242391 gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 3242488  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
3242489 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 3242534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 54689917 - 54690160
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
54689917 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 54690016  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||||| ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
54690017 gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 54690114  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
54690115 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 54690160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 54699348 - 54699591
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
54699348 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 54699447  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||||| ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
54699448 gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 54699545  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
54699546 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 54699591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 558 - 658
Target Start/End: Complemental strand, 47605955 - 47605855
Alignment:
558 ttcacatccttcctgtattcatagggatagagagacttgatccctacttcatgaaacagctatcatgctttaattcaaaaatgatttgagctccaaaatg 657  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||| || |||||||||||||||||| ||||||| ||| |||||||    
47605955 ttcacatccttcctgtatttatagggatagagagacttgatccccacttcataaaacaactgtcatgctttaattcaaaagtgatttgcgcttcaaaatg 47605856  T
658 a 658  Q
    |    
47605855 a 47605855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 98 - 346
Target Start/End: Original strand, 20884453 - 20884703
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||| | |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
20884453 acacaggagagttatcctggttccccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 20884552  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 294  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
20884553 accaacactataaggttttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 20884650  T
295 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
20884651 ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 20884703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 98 - 337
Target Start/End: Complemental strand, 26812692 - 26812449
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
26812692 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 26812593  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||| | ||||||||||||||| |||||| | |||| |||||||||||||||||  |||||| |||||||| |||  ||    || |||    
26812592 gactagcactacaatatcttgatcacaccagatcagtccg-taacac-ctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 26812495  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
26812494 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 26812449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 98 - 337
Target Start/End: Complemental strand, 26822159 - 26821916
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
26822159 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 26822060  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||| | ||||||||||||||| |||||| | |||| |||||||||||||||||  |||||| |||||||| |||  ||    || |||    
26822059 gactagcactacaatatcttgatcacaccagatcagtccg-taacac-ctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 26821962  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
26821961 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 26821916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 98 - 280
Target Start/End: Complemental strand, 3918250 - 3918069
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
3918250 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 3918151  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 280  Q
    || ||| | || ||||| ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| ||||||||||    
3918150 gactagcattacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctt 3918069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 98 - 280
Target Start/End: Complemental strand, 37059270 - 37059089
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
37059270 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 37059171  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 280  Q
    || ||| |||| ||  | ||||||||||||||| |||||| |||||| |||||||||||||||||  |||||| ||||||||||    
37059170 gactagcactacaagatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcagcaggcttatacaattctt 37059089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 98 - 360
Target Start/End: Original strand, 50516502 - 50516764
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||| | |||  || ||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||| ||||     
50516502 acacaggagagttatcctggttccccaaacccgactacttccagtccccacacttcgtgtgagattatccactatagtattccgttggtagaaatttcta 50516601  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaa 294  Q
    |  |  |||||||  | ||||||||||||||| |||||| | || || ||||||||||||||||  ||||| |||||||||||     || | |||||||    
50516602 accaacactataaggtcttgatcacaccagatcagtccg-taaccct-tgtattatcaacctcagcaggctgttacaattctttgctttcgctcaagaaa 50516699  T
295 ggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgta 360  Q
    |||||||||  | |||||||||||||||||||||||||||||| ||| |||  |||||||||||||    
50516700 ggttggaactttcctatctcaaactattaagcccaatagacttgagatcta-ttttacactttgta 50516764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 204 - 364
Target Start/End: Original strand, 16489950 - 16490101
Alignment:
204 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaac 303  Q
    ||||||||||||||||||||||| || |||| | |||||||| |||||||||||||||  || ||| ||| |||||||||||||||| |||      ||     
16489950 actataatttgttgatcacaccatatcagtctg-ttacactcagtattatcaacctcagcagacttctacgattcttgatcacacaaaaaa------aaa 16490042  T
304 aattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggt 364  Q
    ||||||||||||||||||||||||||||| |||| ||| ||||  |||| |||||||||||    
16490043 aattctatctcaaactattaagcccaataaacttgagatctag--ttacgctttgtatggt 16490101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 98 - 280
Target Start/End: Original strand, 15842902 - 15843083
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| ||||| || ||||| ||| ||||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
15842902 acacaggagagttatcttggttcaccaaactcggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttct 15843001  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 280  Q
    || ||| |||||||  | ||||||||| ||||| |||| | |||||| ||||||||||||||| |  |||||| ||||||||||    
15843002 gactagcactataagatcttgatcacatcagatcagtctg-ttacac-ctgtattatcaacctaagcaggcttctacaattctt 15843083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 129 - 346
Target Start/End: Complemental strand, 11482467 - 11482248
Alignment:
129 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 228  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||   |||   |||||||||| |  |  |||||||  | || ||||||||| |    
11482467 cggctacttctagtccccacacttcgtgtgagattatccactatagtatacagttggtagaaacttctaaccaacactataaggtctttatcacaccata 11482368  T
229 taagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaaggttggaacaatt-ctatctcaaactattaa 324  Q
    | ||||||  ||  | |||||||||||||||||   ||||| ||||||||||     || ||||||||||||||||||  || |||||||||||||||||    
11482367 tcagtccg--taacccctgtattatcaacctcagccggcttctacaattctttgctttcgcacaagaaaggttggaactcttcctatctcaaactattaa 11482270  T
325 gcccaatagacttaagacctag 346  Q
    ||| ||||||||| ||| ||||    
11482269 gccgaatagacttgagatctag 11482248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 18125416 - 18125514
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttct 196  Q
    ||||||||||||||||||| |||| ||||| ||| || ||   ||| |||||| | ||||||||||||||||||||||||| || || || ||||||||    
18125416 acacaagagatttatcctggttcattaaatccggttattttcggtctccacacctcgtgtgagattatccattatagtatcctgctaacaaaaacttct 18125514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 45609598 - 45609499
Alignment:
130 ggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagat 229  Q
    ||||||||| ||||| | ||||| || |||||||||||| ||| |||||    |||||||||||| ||||||| ||||||  |  |||||||||||||||    
45609598 ggctacttccagtcctcgcacttcgtatgagattatccactatggtatccaactatcagaaacttttgaatagcactatatgtccttgatcacaccagat 45609499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 3e-59; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 98 - 362
Target Start/End: Original strand, 42732581 - 42732842
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    |||||||||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   | ||  ||||||||||     
42732581 acacaagagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagctagtagaaacttcta 42732680  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggt 297  Q
    | ||| |||||||  | ||||||||||||||| ||||| |  || | |||||||||||||||||| |||||| |||||||||||||||||||||||||||    
42732681 actagcactataaggtcttgatcacaccagatcagtcc-agaaccc-ctgtattatcaacctcaacaggcttctacaattcttgatcacacaagaaaggt 42732778  T
298 tggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatg 362  Q
    || |||  |||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
42732779 tgaaactcttctatctcaaactattaagcccaatagacttgagatctag-tttacactttgtatg 42732842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 129 - 337
Target Start/End: Original strand, 31150670 - 31150868
Alignment:
129 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 228  Q
    ||||||| || ||||||||||||  ||||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||    
31150670 cggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccaga 31150769  T
229 taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc 328  Q
    | |||||| ||||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||         | |||||||||||||||||||||||    
31150770 tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc 31150859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 129 - 337
Target Start/End: Complemental strand, 5600730 - 5600532
Alignment:
129 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 228  Q
    ||||||| || |||||||||||   ||||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||    
5600730 cggctacgtccagtccccacaccacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccaga 5600631  T
229 taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc 328  Q
    | |||||| ||||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||         | |||||||||||||||||||||||    
5600630 tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc 5600541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 129 - 337
Target Start/End: Complemental strand, 5610376 - 5610178
Alignment:
129 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 228  Q
    ||||||| || |||||||||||   ||||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||    
5610376 cggctacgtccagtccccacaccacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccaga 5610277  T
229 taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc 328  Q
    | |||||| ||||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||         | |||||||||||||||||||||||    
5610276 tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc 5610187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 98 - 337
Target Start/End: Complemental strand, 24422461 - 24422218
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
24422461 acacaggagagttatcctggttcaccaaatccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 24422362  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||||| ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
24422361 gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 24422264  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
24422263 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 24422218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 30444833 - 30445076
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||||||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
30444833 acacaggagagttatcctgattcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 30444932  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||||| ||||||||||||||| ||||| || |||| |||||||||||||||||  |||||| |||||||| |||  ||    || |||    
30444933 gactagcactacaatttcttgatcacaccagatcagtcc-ataacac-ctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 30445030  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
30445031 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 30445076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 98 - 346
Target Start/End: Complemental strand, 11223558 - 11223309
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    |||||| ||| |||||||| ||||| ||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||   ||  | ||||||||||     
11223558 acacaaaagagttatcctggttcaccaaactcggctacttccagtccccacacttcgtgtgagattatccattatagtatacagtggt-agaaacttcta 11223460  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 294  Q
    |  |  |||||||  | ||||||||||||||| |||| |  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
11223459 accaacactataaggtcttgatcacaccagatcagtctg--taacccctgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 11223362  T
295 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
11223361 ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 11223309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 98 - 337
Target Start/End: Complemental strand, 24413012 - 24412769
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||| |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
24413012 acacaggagagttatcctggttcaccaaatccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 24412913  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||||| ||||||||||||||| |||| |  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
24412912 gactagcactacaatttcttgatcacaccagatcagtctg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 24412815  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
24412814 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 24412769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 132 - 362
Target Start/End: Complemental strand, 26652768 - 26652541
Alignment:
132 ctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataa 231  Q
    ||||||| ||||||||||||| ||||||||| ||||| ||||||||   | ||  |||||||||| | ||| ||||| |  | |||||||||||| || |    
26652768 ctacttccagtccccacacttcgtgtgagataatccactatagtattcagctaatagaaacttctaactagcactattaggtcttgatcacaccatatca 26652669  T
232 gtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaat 331  Q
    || | |  || || |||||||||||||||  | | ||| ||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| |    
26652668 gttc-agaaccct-tgtattatcaacctcggtggacttctacaattcttgatcacacaagaaaggttgtaactcttctatctcaaactattaagcccagt 26652571  T
332 agacttaagacctagctttacactttgtatg 362  Q
    |||||| ||| |||| |||||||||||||||    
26652570 agacttgagatctag-tttacactttgtatg 26652541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 132 - 362
Target Start/End: Complemental strand, 26924353 - 26924126
Alignment:
132 ctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataa 231  Q
    ||||||| ||||||||||||| ||||||||| ||||| ||||||||   | ||  |||||||||| | ||| ||||| |  | |||||||||||| || |    
26924353 ctacttccagtccccacacttcgtgtgagataatccactatagtattcagctaatagaaacttctaactagcactattaggtcttgatcacaccatatca 26924254  T
232 gtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaat 331  Q
    || | |  || || |||||||||||||||  | | ||| ||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| |    
26924253 gttc-agaaccct-tgtattatcaacctcggtggacttctacaattcttgatcacacaagaaaggttgtaactcttctatctcaaactattaagcccagt 26924156  T
332 agacttaagacctagctttacactttgtatg 362  Q
    |||||| ||| |||| |||||||||||||||    
26924155 agacttgagatctag-tttacactttgtatg 26924126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 30454205 - 30454448
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
30454205 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 30454304  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||||| ||||||||||||||| |||||| | |||| |||||||||||||||||  |||||| |||||||| |||  ||    || |||    
30454305 gactagcactacaatttcttgatcacaccagatcagtccg-taacac-ctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 30454402  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
30454403 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 30454448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 98 - 280
Target Start/End: Complemental strand, 18569223 - 18569042
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
18569223 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 18569124  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 280  Q
    || ||| |||| ||||| ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| ||||||||||    
18569123 gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctt 18569042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 98 - 346
Target Start/End: Original strand, 33955504 - 33955754
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
33955504 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 33955603  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 294  Q
    |  |  |||||||  | ||||||||||||||| ||| ||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
33955604 accaacactataaggtcttgatcacaccagatcagtacg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 33955701  T
295 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
33955702 ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 33955754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 30459263 - 30459506
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
30459263 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 30459362  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||||| ||||||||||||||| |||||| | |||| ||||||||||||||||   |||||| |||||||| |||  ||    || |||    
30459363 gactagcactacaatttcttgatcacaccagatcagtccg-taacac-ctgtattatcaacctcggcaggcttatacaattctttgcacactagcaaaag 30459460  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
30459461 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 30459506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 98 - 337
Target Start/End: Complemental strand, 22489369 - 22489126
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || ||||||||| |    
22489369 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttat 22489270  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||||||  | ||||||||||||||| |||||| |||||| |||||||||||||||||  || ||| |||||||| |||  ||    || |||    
22489269 gactagcactataagatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcagcagacttctacaattctttgcacactagcaaaag 22489172  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
22489171 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 22489126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 104 - 346
Target Start/End: Complemental strand, 20036176 - 20035932
Alignment:
104 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 203  Q
    |||| |||||||| ||||| |||  |||||||||| ||||||||||| |  |||||||||||||| ||||||||   |||   |||||||||| |  |      
20036176 gagagttatcctggttcaccaaacccggctacttccagtccccacacatcatgtgagattatccactatagtatacagttggtagaaacttctaaccaac 20036077  T
204 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttgg 300  Q
    |||||||  | ||||||||||||||| ||||| || || | || |||||||||||| |  |||||| ||||||||||     || ||||| |||||||||    
20036076 actataaggtcttgatcacaccagatcagtcc-ataac-cactatattatcaaccttagcaggcttctacaattctttgctttcgcacaaaaaaggttgg 20035979  T
301 aacaattc-tatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||  ||| ||||||||||||||||||||||||||||| ||| ||||    
20035978 aactcttcctatctcaaactattaagcccaatagacttgagatctag 20035932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 97 - 346
Target Start/End: Complemental strand, 20834615 - 20834364
Alignment:
97 cacacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttct 196  Q
    |||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||  ||||||||||||||| ||||||||   |||   ||||||||||    
20834615 cacacaggagagttatcctggttcaccaaacccggctacttccagtccccacactccgtgtgagattatccactatagtatgcagttggtagaaacttct 20834516  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaa 293  Q
     |  |  |||||||  | ||||||| ||||||| ||| ||  ||  | |||||| ||||||||||  |||||| | ||||||||     || ||||||||    
20834515 aaccaacactataaggtcttgatcataccagatcagttcg--taaccactgtataatcaacctcagcaggcttctccaattctttgctttcgcacaagaa 20834418  T
294 aggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    ||||||||||  || |||| ||||||||||||||||||||||||| ||| ||||    
20834417 aggttggaactcttcctatgtcaaactattaagcccaatagacttgagatctag 20834364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 22448334 - 22448413
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat 177  Q
    |||||||||| |||||||| |||||  ||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||    
22448334 acacaagagagttatcctggttcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagtat 22448413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 132 - 257
Target Start/End: Original strand, 22118140 - 22118265
Alignment:
132 ctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagata 230  Q
    ||||||| ||||||||||| | ||||||||||||||||||||| | || || || ||||||||||||||||  |||||||  | |||||||||||||||     
22118140 ctacttccagtccccacacctcgtgtgagattatccattatagttgtcttgctaacagaaacttctgaataacactataaggtcttgatcacaccagatc 22118239  T
231 agtccgattacactctgtattatcaac 257  Q
    |||| | |||||  |||||||||||||    
22118240 agtctg-ttacatcctgtattatcaac 22118265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 13815377 - 13815617
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||||| |||| |||||||||| |||||||||||||  |||||||||||||| ||||||||   |||   ||||||||||     
13815377 acacaggagagttatcctggttcaccaaatccggctacttccagtccccacacttcatgtgagattatccactatagtattcagttggtagaaacttcta 13815476  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaa 293  Q
    |  |  |||||||  | ||||||||||||||| | || | | || || ||||||||||||||||| |||||| |||||||||||     |  || |||||    
13815477 accaacactataaggtcttgatcacaccagatcattctg-taaccct-tgtattatcaacctcaacaggcttcttacaattctttgcactagcaaaagaa 13815574  T
294 aggttggaacaattctatctcaaactattaagcccaatagactt 337  Q
    |||||||||   |||||||| |||||||||||||||||| ||||    
13815575 aggttggaa-ttttctatcttaaactattaagcccaataaactt 13815617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 104 - 366
Target Start/End: Original strand, 24244053 - 24244316
Alignment:
104 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 203  Q
    |||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||  ||||||||||| |  |      
24244053 gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggcagaaacttctaatcaac 24244152  T
204 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattcttga---tcacacaagaaaggttg 299  Q
    |||| ||  | ||||||||||| ||| |||  |  ||  |||||||||||||||||||  ||| || |||||||||||     |  || |||||||||||    
24244153 actacaacgtcttgatcacacccgatcagtttg--taacctctgtattatcaacctcagcaggattcttacaattctttgcactagcaaaagaaaggttg 24244250  T
300 gaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga 366  Q
    |||   ||||||||||||||||| |||||||||||||| ||| |||   | || |||||||||||||    
24244251 gaatt-ttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga 24244316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 104 - 366
Target Start/End: Original strand, 24290677 - 24290940
Alignment:
104 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 203  Q
    |||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||  ||||||||||| |  |      
24290677 gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggcagaaacttctaatcaac 24290776  T
204 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattcttga---tcacacaagaaaggttg 299  Q
    |||| ||  | ||||||||||| ||| |||  |  ||  |||||||||||||||||||  ||| || |||||||||||     |  || |||||||||||    
24290777 actacaacgtcttgatcacacccgatcagtttg--taacctctgtattatcaacctcagcaggattcttacaattctttgcactagcaaaagaaaggttg 24290874  T
300 gaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga 366  Q
    |||   ||||||||||||||||| |||||||||||||| ||| |||   | || |||||||||||||    
24290875 gaatt-ttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga 24290940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 403 - 500
Target Start/End: Original strand, 24290980 - 24291078
Alignment:
403 ttttacaaacacaaactcaaatagatagagagacaagtaaatatagtgagagcttatggagtttgcttatatttgttgaagagcttga--gagagaatga 500  Q
    ||||||||||||||||||||| |||||  || |||| |||||||||||| |||||||||||||||  | | |||||||||||||||||  ||||||||||    
24290980 ttttacaaacacaaactcaaagagataatgatacaa-taaatatagtgaaagcttatggagtttgaatgtgtttgttgaagagcttgattgagagaatga 24291078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 37514863 - 37514943
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatc 178  Q
    ||||| ||||||||| ||| ||||  |||  |||||||||||||||||||||| ||||||||||||||||| |||||||||    
37514863 acacatgagatttatactggttcatcaaagccggctacttctagtccccacaccttgtgtgagattatccactatagtatc 37514943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 403 - 490
Target Start/End: Original strand, 13815686 - 13815772
Alignment:
403 ttttacaaacacaaactcaaatagatagagagacaagtaaatatagtgagagcttatggagtttgcttatatttgttgaagagcttga 490  Q
    ||||||||| ||| ||||||| |||||  || |||| |||||||||||||||||||||||||||| || | |||||||||||||||||    
13815686 ttttacaaatacagactcaaagagataatgatacaa-taaatatagtgagagcttatggagtttgattgtgtttgttgaagagcttga 13815772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 403 - 500
Target Start/End: Original strand, 24244356 - 24244454
Alignment:
403 ttttacaaacacaaactcaaatagatagagagacaagtaaatatagtgagagcttatggagtttgcttatatttgttgaagagcttga--gagagaatga 500  Q
    |||||||| |||||||||||| |||||  || |||| |||||||||||| |||||||||||||||  | | |||||||||||||||||  ||||||||||    
24244356 ttttacaagcacaaactcaaagagataatgatacaa-taaatatagtgaaagcttatggagtttgaatgtgtttgttgaagagcttgattgagagaatga 24244454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 280
Target Start/End: Complemental strand, 4636129 - 4635948
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||| ||  ||||||||||| |   ||||||||||||| ||||| | || || || |||||||||||    
4636129 acacatgagagttatcctggttcaccaaacccggctattttcagtccccacacctcacgtgagattatccactatagttgtcttgctaacagaaacttct 4636030  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 280  Q
    ||  || |||||||  | |||||||||||| || |||||| |||||| |||| ||||||||||||  |||||| ||||||||||    
4636029 gaccagcactataagatcttgatcacaccatatcagtccg-ttacac-ctgttttatcaacctcagcaggcttctacaattctt 4635948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 1693703 - 1693748
Alignment:
130 ggctacttctagtccccacactttgtgtgagattatccattatagt 175  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||    
1693703 ggctacgtctagtccccacactttgtgtgagattttccattatagt 1693748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 277
Target Start/End: Complemental strand, 16111037 - 16110887
Alignment:
129 cggctacttctagtccccacactttgtgtgagatt---atccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacacc 225  Q
    |||||||||| |||||| |||||| ||||||||||   ||||||||||||||| |  ||||| ||||||  |||||  ||||||  || |||||||||||    
16111037 cggctacttccagtcccgacacttcgtgtgagattaccatccattatagtatcctactatcaaaaactttggaataacactatatgttcttgatcacacc 16110938  T
226 agataagtccgattacactctgtattatcaacctcaataggcttttacaatt 277  Q
    |||  | || | ||||| |||||||||||||| |||| ||| || |||||||    
16110937 agaccaatctg-ttacattctgtattatcaacatcaacaggtttatacaatt 16110887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 22457797 - 22457843
Alignment:
308 ctatctcaaactattaagcccaatagacttaagacctagctttacact 355  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||    
22457797 ctatctcaaactattaagcccaatagacttaagatctag-tttacact 22457843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 17553829 - 17553874
Alignment:
130 ggctacttctagtccccacactttgtgtgagattatccattatagt 175  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||    
17553829 ggctacgtctagtccccacactttgtgtgagattttccactatagt 17553874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 237 - 337
Target Start/End: Original strand, 17553934 - 17554025
Alignment:
237 attacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagact 336  Q
    ||||||| ||||||| | ||||| | |||| || |||||||||||| ||||||||||||||     ||    ||||||||||||||||||||||||||||    
17553934 attacaccctgtattgttaaccttagtaggtttctacaattcttgagcacacaagaaaggt-----ca----tatctcaaactattaagcccaatagact 17554024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 22448479 - 22448525
Alignment:
308 ctatctcaaactattaagcccaatagacttaagacctagctttacact 355  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||    
22448479 ctatctcaaactattaagcccaatagactttagatctag-tttacact 22448525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 7e-57; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 98 - 362
Target Start/End: Original strand, 31575415 - 31575676
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    |||||||||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||   | ||  ||||||||||     
31575415 acacaagagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagctagtagaaacttcta 31575514  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggt 297  Q
    | ||| |||||||  | |||||||||||| || ||||| |  || | |||||||||||||||||  | |||| |||||||||||||||||||||||||||    
31575515 actagcactataaggtcttgatcacaccaaatcagtcc-agaaccc-ctgtattatcaacctcagcaagcttctacaattcttgatcacacaagaaaggt 31575612  T
298 tggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatg 362  Q
    ||||||  |||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
31575613 tggaactcttctatctcaaactattaagcccaatagacttgagatctag-tttacactttgtatg 31575676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 87 - 280
Target Start/End: Complemental strand, 15834145 - 15833953
Alignment:
87 gaagaatgatcacacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatc 186  Q
    ||||||| || |||||||||||||||| || ||||| |||| |||||||||  ||||| ||||| | |||||||||||||||||||||||||||| || |    
15834145 gaagaattataacacaagagatttatcttggttcaccaaatccggctactttcagtccacacacctcgtgtgagattatccattatagtatcatgctaac 15834046  T
187 agaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 280  Q
     ||||||||||| ||| ||||||| || |||| || ||||||||||| || |||| | ||||||||||||| ||| |||| || ||||||||||    
15834045 tgaaacttctgactagcactataagttcttgaccataccagataagttcg-ttactccctgtattatcaacatcagtaggtttctacaattctt 15833953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 98 - 346
Target Start/End: Original strand, 42712182 - 42712432
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
42712182 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 42712281  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 294  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
42712282 accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 42712379  T
295 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
42712380 ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 42712432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 98 - 346
Target Start/End: Complemental strand, 12925537 - 12925287
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||||| |||  || ||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
12925537 acacaggagagttatcctggttcacgaaacccgactacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 12925438  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattct---tgatcacacaagaaa 294  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| |||||||||   |  || |||||||||    
12925437 accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgttttcgcacaagaaa 12925340  T
295 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
12925339 ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 12925287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 98 - 346
Target Start/End: Complemental strand, 20030362 - 20030112
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    |||||||||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   | ||||||||     
20030362 acacaagagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagttggtataaacttcta 20030263  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 294  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
20030262 accaacactataaggtcttgatcacaccagatcagtccg--taatccctgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 20030165  T
295 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||||||||  || |||||||||||||||||||| ||||||||| ||| ||||    
20030164 ggttggaactcttcctatctcaaactattaagccaaatagacttgagatctag 20030112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 84 - 337
Target Start/End: Original strand, 7789068 - 7789325
Alignment:
84 agagaagaatgatcacacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgt 182  Q
    |||||||||  || ||||| |||| |||| ||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || ||     
7789068 agagaagaagaataacacaggagaattattctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgc 7789167  T
183 tatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttg 281  Q
    || ||||||||||||| ||| |||| ||||| ||||||||||||||| |||| |  ||  |||||||||||||||||||  |||||| |||||||| |||    
7789168 taacagaaacttctgactagcactacaatttcttgatcacaccagatcagtctg--taacctctgtattatcaacctcagcaggcttatacaattctttg 7789265  T
282 atca----cacaagaaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
      ||    || ||||||||||||||   ||||||||| |||||||||||||||||||||||    
7789266 cacactagcaaaagaaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 7789325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 98 - 346
Target Start/End: Complemental strand, 20045001 - 20044751
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||||| |||  ||||||| || ||||||||||||| |||||||||||||||  |||||||   |||   ||||||||||     
20045001 acacatgagagttatcctggttcaccaaacccggctacatccagtccccacacttcgtgtgagattatccacgatagtatacagttggtagaaacttcta 20044902  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaa 294  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
20044901 accaacactataaggtcttgatcacaccagatcagtccg--taacccctgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 20044804  T
295 ggttggaacaattc-tatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||||||||  ||| ||||||||||||||||||||||||||||| ||| ||||    
20044803 ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 20044751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 98 - 280
Target Start/End: Complemental strand, 20714253 - 20714072
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | |||||| |||||||||||||| | || || || |||||||||||    
20714253 acacatgagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgacattatccattatagttgtcttgctaacagaaacttct 20714154  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 280  Q
    || ||| |||||||  | ||||||||||||||| |||| | |||||| |||||||||||||||||  |||||| ||||||||||    
20714153 gactagcactataagatcttgatcacaccagatcagtctg-ttacac-ctgtattatcaacctcagcaggcttctacaattctt 20714072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 98 - 366
Target Start/End: Original strand, 18883164 - 18883433
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||| ||||     
18883164 acacaggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggtagaaaattcta 18883263  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaa 293  Q
    |  |  |||||||  | ||||||||||||||| ||| ||  ||| |||||||||||||||||||  |||||| |||||||||||     |  || |||||    
18883264 accaacactataaagtcttgatcacaccagatcagttcg--taccctctgtattatcaacctcagcaggcttcttacaattctttgcactagcaaaagaa 18883361  T
294 aggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga 366  Q
    |||||||||   ||||||||||||||||| |||||||||||||| ||| |||   | || |||||||||||||    
18883362 aggttggaa-ttttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga 18883433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 98 - 366
Target Start/End: Original strand, 18143433 - 18143702
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| ||||| || ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||| ||   |||   | ||||||||     
18143433 acacaggagagttatcttggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagcattcagttggtaaaaacttcta 18143532  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaa 293  Q
    |  |  |||||||  | ||||||||||||||| |||| | | || || |||||||||||||||| ||||||| |||||||||||     |  || |||||    
18143533 accaacactataaggtcttgatcacaccagatcagtctg-taaccct-tgtattatcaacctcagtaggcttcttacaattctttgcactagcaaaagaa 18143630  T
294 aggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga 366  Q
    |||||||||   |||||||||||||||||||||||||||||||| ||| |||  || || |||||||||||||    
18143631 aggttggaa-ttttctatctcaaactattaagcccaatagacttgagaactaaattcacgctttgtatggtga 18143702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 25051067 - 25051307
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    |||||||||| ||||| || |||||  |||  ||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
25051067 acacaagagagttatcttggttcacccaatctggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggtagaaacttcta 25051166  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaa 293  Q
    |  |  |||||||| | ||||||||||||||| |||| |  ||  |||||||||||||||||||  |||||| |||||||||||     |  || |||||    
25051167 accaacactataatgtcttgatcacaccagatcagtctg--taacctctgtattatcaacctcagcaggcttcttacaattctttgcactagcaaaagaa 25051264  T
294 aggttggaacaattctatctcaaactattaagcccaatagactt 337  Q
    |||||||||   ||||||||||||||||||||||||||| ||||    
25051265 aggttggaa-ttttctatctcaaactattaagcccaatatactt 25051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 104 - 366
Target Start/End: Complemental strand, 18252006 - 18251743
Alignment:
104 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 203  Q
    |||| |||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||  ||||||||||| |  |      
18252006 gagagttatcctgattcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggcagaaacttctaaccaac 18251907  T
204 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaaaggttg 299  Q
    |||||||  | ||||||||||| ||| |||  |  ||  |||||||||||||||||||  ||| || |||||||||||     |  || |||||||||||    
18251906 actataacgtcttgatcacacccgatcagtttg--taacctctgtattatcaacctcagcaggattcttacaattctttgcactagcaaaagaaaggttg 18251809  T
300 gaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga 366  Q
    |||   ||||||||||||||||| |||||||||||||| ||| |||   | || |||||||||||||    
18251808 gaa-ttttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga 18251743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 402 - 490
Target Start/End: Original strand, 18143741 - 18143828
Alignment:
402 attttacaaacacaaactcaaatagatagagagacaagtaaatatagtgagagcttatggagtttgcttatatttgttgaagagcttga 490  Q
    |||||||||||||||||||||| |||||  || |||| |||||||||||||||||||||||||||| || | |||||||||||||||||    
18143741 attttacaaacacaaactcaaagagataatgatacaa-taaatatagtgagagcttatggagtttgattgtgtttgttgaagagcttga 18143828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 25037030 - 25037270
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    |||||||||| ||||| || |||||  |||  ||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
25037030 acacaagagagttatcttggttcacccaatctggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggtagaaacttcta 25037129  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaa 293  Q
    |  |  |||||||  | ||||||||||||||| |||| |  ||  |||||||||||||||||||  |||||| |||||||||||     |  || |||||    
25037130 accaacactataaagtcttgatcacaccagatcagtctg--taacctctgtattatcaacctcagcaggcttcttacaattctttgcactagcaaaagaa 25037227  T
294 aggttggaacaattctatctcaaactattaagcccaatagactt 337  Q
    |||||||||   ||||||||||||||||||||||||||| ||||    
25037228 aggttggaa-ttttctatctcaaactattaagcccaatatactt 25037270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 104 - 177
Target Start/End: Original strand, 4843732 - 4843805
Alignment:
104 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat 177  Q
    |||| |||||||| |||||||||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||    
4843732 gagagttatcctggttcactaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtat 4843805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 140 - 346
Target Start/End: Complemental strand, 12767772 - 12767564
Alignment:
140 agtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgatt 239  Q
    |||||||||| || ||||||||||||||| ||||||||   |||   |||||||||| |  |  |||||||  | ||||||||||||||| ||||||  |    
12767772 agtccccacatttcgtgtgagattatccactatagtattcagttggtagaaacttctaaccaacactataaggtcttgatcacaccagatcagtccg--t 12767675  T
240 acactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttggaacaattc-tatctcaaactattaagcccaatagac 335  Q
    |  | |||||||||||||||||  |||||| ||||||||||     || ||||||||||||||||||  ||| |||||||||||||||||| ||||||||    
12767674 aacccctgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttggaactcttcctatctcaaactattaagctcaatagac 12767575  T
336 ttaagacctag 346  Q
    || ||| ||||    
12767574 ttgagatctag 12767564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 18233104 - 18233031
Alignment:
104 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat 177  Q
    |||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||    
18233104 gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtat 18233031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 18242555 - 18242482
Alignment:
104 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat 177  Q
    |||| |||||||| ||||| |||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||    
18242555 gagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtat 18242482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 403 - 500
Target Start/End: Complemental strand, 18232801 - 18232703
Alignment:
403 ttttacaaacacaaactcaaatagatagagagacaagtaaatatagtgagagcttatggagtttgcttatatttgttgaagagcttga--gagagaatga 500  Q
    ||||||||||||||||||||| |||||  || |||| |||||||||||| |||||||||||||||  | | |||||||||||||||||  ||||||||||    
18232801 ttttacaaacacaaactcaaagagataatgatacaa-taaatatagtgaaagcttatggagtttgaatgtgtttgttgaagagcttgattgagagaatga 18232703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 403 - 500
Target Start/End: Complemental strand, 18242252 - 18242154
Alignment:
403 ttttacaaacacaaactcaaatagatagagagacaagtaaatatagtgagagcttatggagtttgcttatatttgttgaagagcttga--gagagaatga 500  Q
    ||||||||||||||||||||| |||||  || |||| |||||||||||| |||||||||||||||  | | |||||||||||||||||  ||||||||||    
18242252 ttttacaaacacaaactcaaagagataatgatacaa-taaatatagtgaaagcttatggagtttgaatgtgtttgttgaagagcttgattgagagaatga 18242154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 403 - 500
Target Start/End: Complemental strand, 18251703 - 18251605
Alignment:
403 ttttacaaacacaaactcaaatagatagagagacaagtaaatatagtgagagcttatggagtttgcttatatttgttgaagagcttga--gagagaatga 500  Q
    ||||||||||||||||||||| |||||  || |||| |||||||||||| |||||||||||||||  | | |||||||||||||||||  ||||||||||    
18251703 ttttacaaacacaaactcaaagagataatgatacaa-taaatatagtgaaagcttatggagtttgaatgtgtttgttgaagagcttgattgagagaatga 18251605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 12915642 - 12915563
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat 177  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||    
12915642 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtat 12915563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 33592138 - 33592215
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagt 175  Q
    ||||| |||| |||||||| |||||  ||| |||||||||| ||||||||||||| ||||||||||||||| ||||||    
33592138 acacaggagagttatcctggttcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagt 33592215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 33601777 - 33601854
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagt 175  Q
    ||||| |||| |||||||| |||||  ||| |||||||||| ||||||||||||| ||||||||||||||| ||||||    
33601777 acacaggagagttatcctggttcacccaatccggctacttccagtccccacacttcgtgtgagattatccactatagt 33601854  T

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Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 235
Target Start/End: Original strand, 24096079 - 24096217
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtcccc-acactttgtgtgagattatccattatagtatcatgttatcagaaacttct 196  Q
    ||||| ||||||||| ||| ||||| ||| ||| ||||||| ||||||| |||| | ||||||||||||||| ||||||||| || || || |||||| |    
24096079 acacaggagatttattctggttcaccaaactcgactacttccagtcccccacacctcgtgtgagattatccactatagtatcttgctaacataaactttt 24096178  T
197 gaatagaactataatttgttgatcacaccagataagtcc 235  Q
    || ||| |||| || || ||||| |||||| || |||||    
24096179 gactagcactacaagttcttgattacaccatatcagtcc 24096217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 403 - 465
Target Start/End: Original strand, 25037339 - 25037400
Alignment:
403 ttttacaaacacaaactcaaatagatagagagacaagtaaatatagtgagagcttatggagtt 465  Q
    |||||||||||||| ||||||  ||||||||||||| ||||||||||| ||||||||||||||    
25037339 ttttacaaacacaatctcaaaaggatagagagacaa-taaatatagtgtgagcttatggagtt 25037400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 403 - 465
Target Start/End: Original strand, 25051376 - 25051437
Alignment:
403 ttttacaaacacaaactcaaatagatagagagacaagtaaatatagtgagagcttatggagtt 465  Q
    |||||||||||||| ||||||  ||||||||||||| ||||||||||| ||||||||||||||    
25051376 ttttacaaacacaatctcaaaaggatagagagacaa-taaatatagtgtgagcttatggagtt 25051437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 403 - 488
Target Start/End: Original strand, 18883473 - 18883557
Alignment:
403 ttttacaaacacaaactcaaatagatagagagacaagtaaatatagtgagagcttatggagtttgcttatatttgttgaagagctt 488  Q
    |||||||||||| |||||||| |||||  || |||| ||||| |||||||||||||||||||||| || | ||||| |||||||||    
18883473 ttttacaaacacgaactcaaagagataatgatacaa-taaatctagtgagagcttatggagtttgattgtgtttgtggaagagctt 18883557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 24634117 - 24634014
Alignment:
132 ctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataa 231  Q
    ||||||| ||||||||||||| |||||| |||||||| ||||||||   | ||  |||||||||| | ||| |||||||  | ||||||||||||||| |    
24634117 ctacttccagtccccacacttcgtgtgatattatccactatagtattcagctagtagaaacttctaactagcactataaggtcttgatcacaccagatca 24634018  T
232 gtcc 235  Q
    ||||    
24634017 gtcc 24634014  T

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Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 366
Target Start/End: Complemental strand, 18232917 - 18232841
Alignment:
289 aagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga 366  Q
    ||||||||||||||   ||||||||||||||||| |||||||||||||| ||| |||   | || |||||||||||||    
18232917 aagaaaggttggaatt-ttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga 18232841  T

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Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 366
Target Start/End: Complemental strand, 18242368 - 18242292
Alignment:
289 aagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtga 366  Q
    ||||||||||||||   ||||||||||||||||| |||||||||||||| ||| |||   | || |||||||||||||    
18242368 aagaaaggttggaatt-ttctatctcaaactattcagcccaatagacttgagaactaagatcactctttgtatggtga 18242292  T

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Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 42896184 - 42896229
Alignment:
129 cggctacttctagtccccacactttgtgtgagattatccattatag 174  Q
    |||||||||| |||| |||||||| ||||||||||||||| |||||    
42896184 cggctacttccagtctccacacttcgtgtgagattatccactatag 42896229  T

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Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 4843921 - 4843968
Alignment:
289 aagaaaggttggaacaattctatctcaaactattaagcccaatagactt 337  Q
    ||||||||||||||   |||||||||||||||||||| |||||||||||    
4843921 aagaaaggttggaatt-ttctatctcaaactattaaggccaatagactt 4843968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 7e-57; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 71 - 365
Target Start/End: Complemental strand, 54624863 - 54624581
Alignment:
71 aaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat 169  Q
    |||| ||||||||||||||||| ||  |||||||||| ||||||||| ||| |  ||  ||||||| || ||||||||||||  |||||||||||||||     
54624863 aaattaagagatgagagaagaaagagaacacaagagaatttatcctggttcgcctaac-cggctacgtccagtccccacactacgtgtgagattatccac 54624765  T
170 tatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt 269  Q
    ||||||||| || |||||||||||||||||||| |||||||| ||||||||| ||||||| |||| | ||||||||||||||||||||||||  ||||||    
54624764 tatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcataccagatcagtctg-ttacactctgtattatcaacctcagcaggctt 54624666  T
270 ttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtg 365  Q
     ||| ||||||||||||||||||||         |  ||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||||||    
54624665 ctacgattcttgatcacacaagaaa---------agatctatctcaaactattaagcccaatagacttgagatctag--ttacactttgtatggtg 54624581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 71 - 337
Target Start/End: Original strand, 17529838 - 17530094
Alignment:
71 aaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat 169  Q
    |||| ||||||||||||||||  ||  |||||||||| ||||||||| ||| |  ||  ||||||| || ||||||||||||  |||||||||||||||     
17529838 aaattaagagatgagagaagagagagaacacaagagaatttatcctggttcgcctaac-cggctacgtccagtccccacactacgtgtgagattatccac 17529936  T
170 tatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt 269  Q
    ||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||  ||||||    
17529937 tatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccagatcagtccg-ttacactctgtattatcaacctcagcaggctt 17530035  T
270 ttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagactt 337  Q
     ||| ||||||||||||||||||||         | ||||||||||||||||||||||||||||||||    
17530036 ctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagcccaatagactt 17530094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 69 - 294
Target Start/End: Complemental strand, 32878080 - 32877856
Alignment:
69 aaaaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatcc 167  Q
    |||||| ||||||||||||||||  ||  |||||||||| ||||||||| ||| |  ||  ||||||| || ||||||||||||  ||||||||||||||    
32878080 aaaaattaagagatgagagaagagagagaacacaagagaatttatcctggttcgcctaac-cggctacgtccagtccccacactacgtgtgagattatcc 32877982  T
168 attatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggc 267  Q
    | |||||||||||| ||||| |||||||||||||  |||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||  ||||    
32877981 actatagtatcatgctatcataaacttctgaataacactataatttgttgatcacaccagatcagtctg-ttacactctgtattatcaacctcagcaggc 32877883  T
268 ttttacaattcttgatcacacaagaaa 294  Q
    || ||| ||||||||||||||||||||    
32877882 ttctacgattcttgatcacacaagaaa 32877856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 129 - 337
Target Start/End: Complemental strand, 48978816 - 48978622
Alignment:
129 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 228  Q
    ||||||| || ||||||||||||  ||||||||||||||| |||||||||     ||||||||||||||||||| |||||||| ||||||||||||||||    
48978816 cggctacgtccagtccccacactacgtgtgagattatccactatagtatcc----atcagaaacttctgaatagcactataatatgttgatcacaccaga 48978721  T
229 taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc 328  Q
    | |||||| ||||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||         | |||||||||||||||||||||||    
48978720 tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc 48978631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 129 - 337
Target Start/End: Complemental strand, 48988356 - 48988162
Alignment:
129 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 228  Q
    ||||||| || ||||||||||||  ||||||||||||||| |||||||||     ||||||||||||||||||| |||||||| ||||||||||||||||    
48988356 cggctacgtccagtccccacactacgtgtgagattatccactatagtatcc----atcagaaacttctgaatagcactataatatgttgatcacaccaga 48988261  T
229 taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc 328  Q
    | |||||| ||||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||         | |||||||||||||||||||||||    
48988260 tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc 48988171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 42 - 337
Target Start/End: Complemental strand, 19389002 - 19388712
Alignment:
42 gtgatagtgtgtgaaatgtgttaaatgaaaaataaagagatgagagaagaatgatcacacaagagatttatcctgattcactaaattcggctacttctag 141  Q
    ||||||||||||||| |||||||| | |||| ||| ||||| ||||||||| ||  ||||||||| ||||||||| ||||| ||| ||||||||||| ||    
19389002 gtgatagtgtgtgaagtgtgttaagttaaaattaa-gagataagagaagaaagagaacacaagagttttatcctggttcaccaaaatcggctacttcaag 19388904  T
142 tccccacactttgtgtgagattatccattatagta-tcatgt-tatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgatt 239  Q
    ||||||||||| ||||||||||||| | ||||||| |||  | ||||| |||||||||||||| ||||||| |||||||| |||||| || |||| ||||    
19388903 tccccacacttcgtgtgagattatcgactatagtattcagctatatcataaacttctgaatagcactataagttgttgatgacaccatatcagtctgatt 19388804  T
240 acactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaagg-ttggaacaattc-tatctcaaactattaagcccaatagactt 337  Q
     |||| |||||||| | |||||  ||||        ||| ||||||||||||||||| ||| ||||| || |||||||||||| ||| || |||||||||    
19388803 gcactatgtattattatcctcagcaggc--------ttcatgatcacacaagaaaggtttgaaacaactcttatctcaaactactaatcctaatagactt 19388712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 24794550 - 24794793
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
24794550 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 24794649  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||||| ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
24794650 gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 24794747  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
24794748 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 24794793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 28367657 - 28367900
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
28367657 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 28367756  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||| | ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
28367757 gactagcactacaatatcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 28367854  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
28367855 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 28367900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 28375475 - 28375718
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
28375475 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 28375574  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||| | ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
28375575 gactagcactacaatatcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 28375672  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
28375673 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 28375718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 28383297 - 28383540
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
28383297 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 28383396  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||| | ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
28383397 gactagcactacaatatcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 28383494  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
28383495 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 28383540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 28351724 - 28351967
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||| ||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
28351724 acacaggagagttatgctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 28351823  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||| | ||||||||||||||| ||||||  ||  ||||||||||||||||| |  |||||| |||||||| |||  ||    || |||    
28351824 gactagcactacaatatcttgatcacaccagatcagtccg--taacctctgtattatcaaccttagcaggcttatacaattctttgcacactagcaaaag 28351921  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
28351922 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 28351967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 98 - 346
Target Start/End: Complemental strand, 5385873 - 5385623
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat-catgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| |||||||| ||  | || ||||||||||    
5385873 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagctgat-agaaacttct 5385775  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaa 293  Q
     |  |  |||||||  | ||||||||||||||| |||  |  ||  | |||||| ||||||||||  |||||| ||||||||||     || ||||||||    
5385774 aaccaacactataaggtcttgatcacaccagatcagtatg--taaccactgtatcatcaacctcagcaggcttctacaattctttgctttcgcacaagaa 5385677  T
294 aggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    ||||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
5385676 aggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 5385623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 129 - 280
Target Start/End: Original strand, 38529212 - 38529362
Alignment:
129 cggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccag 227  Q
    |||||||||| ||| ||||||| | ||||||||||||||| ||||| | || || || |||||| |||||| ||| |||||||  | |||||||||||||    
38529212 cggctacttccagtgcccacacctcgtgtgagattatccactatagttgtcttgctaacagaaatttctgactagcactataagatcttgatcacaccag 38529311  T
228 ataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 280  Q
    || |||| | ||||||| |||||||||||||||| ||||||| ||||||||||    
38529312 atgagtctg-ttacact-tgtattatcaacctcagtaggcttctacaattctt 38529362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 88 - 346
Target Start/End: Original strand, 13328272 - 13328532
Alignment:
88 aagaatgatcacacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatca 187  Q
    |||||| || ||||| |||| ||||| || ||||| |||  || ||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   |    
13328272 aagaataataacacaggagagttatcttggttcaccaaacccgactacttccagtccccacacttcgtgtgagattatccactatagtatacagttggta 13328371  T
188 gaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatc 284  Q
    ||||||||| |  |  ||||| |  | ||||||||||||||| |||||| | || || ||||||||||||||||  | |||| ||||||||||     ||    
13328372 gaaacttctaaccaacactattaggtcttgatcacaccagatcagtccg-taaccct-tgtattatcaacctcagcaagcttctacaattctttgctttc 13328469  T
285 acacaagaaaggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
     ||||||||||||||||||  || ||||||||||||||||| |||| ||||||| ||| ||||    
13328470 gcacaagaaaggttggaactcttcctatctcaaactattaatcccagtagacttgagatctag 13328532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 129 - 346
Target Start/End: Original strand, 46305609 - 46305827
Alignment:
129 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 228  Q
    |||||||||| ||||||||||||| || |||||||||||| | ||||||   |||   |||||||||| |  |  |||||||  | ||||||||||||||    
46305609 cggctacttccagtccccacacttcgt-tgagattatccactttagtatacagttggtagaaacttctaaccaacactataaggtcttgatcacaccaga 46305707  T
229 taagtccgattacactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttggaacaattc-tatctcaaactattaa 324  Q
    | |||| |  ||  | |||||||||||||||||  |||||| ||||||||||     || ||||||||||||||||||  ||| ||||||||||||||||    
46305708 tcagtctg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttggaactcttcctatctcaaactattaa 46305805  T
325 gcccaatagacttaagacctag 346  Q
    ||||||||||||| ||| ||||    
46305806 gcccaatagacttgagatctag 46305827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 335
Target Start/End: Complemental strand, 4951777 - 4951537
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattata-gtatcatgttatcagaaacttct 196  Q
    ||||| |||| ||||| || ||||| ||| ||| ||||||| ||||| ||||| | ||||||||||||||| ||||  | || || || |||||| ||||    
4951777 acacatgagagttatcttggttcaccaaactcgactacttcaagtcctcacacctcgtgtgagattatccactatatttgtcttgctaacagaaatttct 4951678  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacac------aa 290  Q
    || ||| |||| ||  | ||| ||||||||||| |||| | |||||| |||||||||||||||||| || ||| |||||||||| | |||||      ||    
4951677 gactagcactacaaggtattggtcacaccagatcagtctg-ttacac-ctgtattatcaacctcaacagccttctacaattcttta-cacactagcaaaa 4951581  T
291 gaaaggttggaacaattctatctcaaactattaagcccaatagac 335  Q
    |||||||| |||   |||||||||||||||||||||| |||||||    
4951580 gaaaggtt-gaaattttctatctcaaactattaagccaaatagac 4951537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 140 - 346
Target Start/End: Complemental strand, 23487182 - 23486974
Alignment:
140 agtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgatt 239  Q
    |||||||||| || ||||||||||||||| ||||||||   |||   |||||||||| |  |  |||||||  | ||||||||||||||| |||| | |     
23487182 agtccccacatttcgtgtgagattatccactatagtattcagttggtagaaacttctaaccaacactataaggtcttgatcacaccagatcagtctg-ta 23487084  T
240 acactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttggaacaattc-tatctcaaactattaagcccaatagac 335  Q
    || || ||||||||||||||||  |||||| ||||||||||     |  |||||||||| |||||||  ||| |||||||||||||||||||||||||||    
23487083 accct-tgtattatcaacctcagcaggcttctacaattctttgcttttgcacaagaaagcttggaactcttcctatctcaaactattaagcccaatagac 23486985  T
336 ttaagacctag 346  Q
    || ||| ||||    
23486984 ttgagatctag 23486974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 4361520 - 4361618
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttct 196  Q
    ||||||||||||||||||| |||| ||||| ||| || ||   ||| |||||| | ||||||||||||||||||||||||| || || || ||||||||    
4361520 acacaagagatttatcctggttcattaaatccggttattttcggtctccacacctcgtgtgagattatccattatagtatcctgctaacaaaaacttct 4361618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 321
Target Start/End: Original strand, 7784100 - 7784237
Alignment:
186 cagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---ga 282  Q
    ||||||||| ||| ||  |||||||  | ||||||||||||||| |||| | |||||| |||||||||||||||||  |||||| ||||||||||         
7784100 cagaaacttatgactaacactataaggtcttgatcacaccagatcagtctg-ttacaccctgtattatcaacctcagcaggcttctacaattcttttcct 7784198  T
283 tcacacaagaaaggttggaacaattctatctcaaactat 321  Q
    ||  |||||||||||||  |||||||| |||||||||||    
7784199 tcctacaagaaaggttgttacaattctttctcaaactat 7784237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 306 - 337
Target Start/End: Original strand, 17535002 - 17535033
Alignment:
306 ttctatctcaaactattaagcccaatagactt 337  Q
    ||||||||||||||||||||||||||||||||    
17535002 ttctatctcaaactattaagcccaatagactt 17535033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 109; Significance: 2e-54; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 71 - 365
Target Start/End: Complemental strand, 100191 - 99909
Alignment:
71 aaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat 169  Q
    |||| ||||||||||||||||  ||  |||||||||| ||||||||| ||| |  ||  ||||||  || ||||||||||||  ||||||||||||||||    
100191 aaattaagagatgagagaagagagagaacacaagagaatttatcctggttcgcctaac-cggctatgtccagtccccacactacgtgtgagattatccat 100093  T
170 tatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt 269  Q
    ||||||||| || |||||||||||||||||||| |||||||| |||||||||||||| || |||| | ||||||||||||||||||||||||| | ||||    
100092 tatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccaaatcagtctg-ttacactctgtattatcaacctcaacaagctt 99994  T
270 ttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtg 365  Q
     ||  ||||||||||||||||||||         | |||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||||||    
99993 ctatgattcttgatcacacaagaaa---------agttctatctcaaactattaagcccaatagacttgagatctag--ttacactttgtatggtg 99909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 215 - 346
Target Start/End: Complemental strand, 143235 - 143102
Alignment:
215 ttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttga---tcacacaagaaaggttggaacaattc-ta 310  Q
    ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || ||||||||||||||||||  ||| ||    
143235 ttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttggaactcttccta 143138  T
311 tctcaaactattaagcccaatagacttaagacctag 346  Q
    ||||||||||||||||||||||||||| ||| ||||    
143137 tctcaaactattaagcccaatagacttgagatctag 143102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 280
Target Start/End: Complemental strand, 124230 - 124050
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||||  |||| | | |||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
124230 acacaggagagttatcctggttcatcaaatcctgttacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 124131  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 280  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||    
124130 accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctt 124050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 306 - 365
Target Start/End: Complemental strand, 180889 - 180832
Alignment:
306 ttctatctcaaactattaagcccaatagacttaagacctagctttacactttgtatggtg 365  Q
    |||||||||||||||||||||||||||||||| ||| ||||  |||||||||||||||||    
180889 ttctatctcaaactattaagcccaatagacttgagatctag--ttacactttgtatggtg 180832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 2e-54; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 129 - 337
Target Start/End: Complemental strand, 1800643 - 1800445
Alignment:
129 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 228  Q
    ||||||| || ||||||||||||  ||||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||    
1800643 cggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccaga 1800544  T
229 taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc 328  Q
    | |||||| ||||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||         | |||||||||||||||||||||||    
1800543 tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc 1800454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 71 - 337
Target Start/End: Complemental strand, 22632610 - 22632354
Alignment:
71 aaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat 169  Q
    |||| ||||||||||||||||  ||  |||||||||| ||||||||| ||| |  ||  ||||||| || ||||||||||||  |||||||||||||||     
22632610 aaattaagagatgagagaagagagagaacacaagagaatttatcctggttcgcctaac-cggctacgtccagtccccacactacgtgtgagattatccac 22632512  T
170 tatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt 269  Q
    ||||||||| || |||||||||||||||| ||  |||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||  ||||||    
22632511 tatagtatcctgctatcagaaacttctgactaacactataatatgttgatcacaccagatcagtccg-ttacactctgtattatcaacctcagcaggctt 22632413  T
270 ttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagactt 337  Q
     ||| ||||||||||||||||||||         | ||||||||||||||||||||||||||||||||    
22632412 ctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagcccaatagactt 22632354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 129 - 337
Target Start/End: Complemental strand, 1791145 - 1790951
Alignment:
129 cggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccaga 228  Q
    ||||||| || ||||||||||||  ||||||||||||||| |||||||||     ||||||||||||||||||| |||||||| ||||||||||||||||    
1791145 cggctacgtccagtccccacactacgtgtgagattatccactatagtatcc----atcagaaacttctgaatagcactataatatgttgatcacaccaga 1791050  T
229 taagtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagccc 328  Q
    | |||||| ||||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||         | |||||||||||||||||||||||    
1791049 tcagtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagccc 1790960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 104 - 346
Target Start/End: Complemental strand, 35877693 - 35877449
Alignment:
104 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 203  Q
    |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   |||||||||| |  |      
35877693 gagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaac 35877594  T
204 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaaggttgg 300  Q
    |||||||  | ||||||||||||||| ||| ||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||||||||    
35877593 actataaggtcttgatcacaccagatcagttcg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttgg 35877496  T
301 aacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||  || |||||||||||||||||||||||||||||| ||| ||||    
35877495 aactcttcctatctcaaactattaagcccaatagacttgagatctag 35877449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 104 - 346
Target Start/End: Complemental strand, 35885182 - 35884938
Alignment:
104 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 203  Q
    |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   |||||||||| |  |      
35885182 gagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaac 35885083  T
204 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaaggttgg 300  Q
    |||||||  | ||||||||||||||| ||| ||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||||||||    
35885082 actataaggtcttgatcacaccagatcagttcg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttgg 35884985  T
301 aacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||  || |||||||||||||||||||||||||||||| ||| ||||    
35884984 aactcttcctatctcaaactattaagcccaatagacttgagatctag 35884938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 104 - 346
Target Start/End: Complemental strand, 36724895 - 36724651
Alignment:
104 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 203  Q
    |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   |||||||||| |  |      
36724895 gagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaac 36724796  T
204 actataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaaggttgg 300  Q
    |||||||  | ||||||||||||||| ||| ||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||||||||    
36724795 actataaggtcttgatcacaccagatcagttcg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaaggttgg 36724698  T
301 aacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||  || |||||||||||||||||||||||||||||| ||| ||||    
36724697 aactcttcctatctcaaactattaagcccaatagacttgagatctag 36724651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 98 - 280
Target Start/End: Original strand, 31710470 - 31710651
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||  ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
31710470 acacatgagagttatccttgttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttct 31710569  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 280  Q
    || ||| |||||||  | ||||||||||||||| |||||| |||||| |||||||||||||||||  || ||| ||||||||||    
31710570 gactagcactataagatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcagcagacttctacaattctt 31710651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 104 - 280
Target Start/End: Original strand, 24022752 - 24022927
Alignment:
104 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagta-tcatgttatcagaaacttctgaatag 202  Q
    |||| |||||||  ||||| |||  |||||||||| | | ||||||| | ||||||||||||||| ||||||  || || || ||||||||||||| |||    
24022752 gagagttatcctcgttcaccaaacccggctacttccaattcccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttctgactag 24022851  T
203 aactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 280  Q
     |||||||  | ||||||||||||||| |||||| |||||| |||||||||||||||||| |||||| ||||||||||    
24022852 cactataagatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcaacaggcttctacaattctt 24022927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 98 - 346
Target Start/End: Complemental strand, 3397106 - 3396856
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| ||||| || ||||| |||  | |||||||||||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
3397106 acacaggagagttatcatggttcaccaaacccagctacttctagtccccacacttcgtgtgagattatccactatagtatacagttggtagaaacttcta 3397007  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 294  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  |  ||||||||||||||||  || ||| || |||||||     || |||||||||    
3397006 accaacactataaggtcttgatcacaccagatcagtccg--taaccattgtattatcaacctcagcagacttctaaaattctttgctttcgcacaagaaa 3396909  T
295 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
3396908 ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 3396856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 98 - 337
Target Start/End: Complemental strand, 14273388 - 14273146
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||  |||| |||||| | ||||||||||||||| ||||| | || || || |||||||||||    
14273388 acacacgagaattatcctggttcaccaaacccggctactttcagtctccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttct 14273289  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||||||  | || ||||||||| || |||| | |||||| || ||||||||||||||  |||||| |||||||| |||  ||    || |||    
14273288 gactagcactataagatcttaatcacaccatatcagtctg-ttacac-ctatattatcaacctcagcaggcttctacaattctttgcacactagcaaaag 14273191  T
292 aaaggttggaacaattctatctcaaactattaagcccaatagactt 337  Q
    ||| |||||||   |||||||| |||||||||||||||||||||||    
14273190 aaatgttggaa-ttttctatcttaaactattaagcccaatagactt 14273146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 16446736 - 16446668
Alignment:
109 ttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat 177  Q
    ||||||||  ||||||||| || ||||||  |||||||||| || ||||||||||||||| ||||||||    
16446736 ttatcctggatcactaaatccgactactttcagtccccacatttcgtgtgagattatccactatagtat 16446668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 490
Target Start/End: Original strand, 20011878 - 20011925
Alignment:
441 aaatatagtgagagcttatggagtttgcttatatttgttgaagagcttga 490  Q
    |||||||||||||  ||||||||||||||||| |||||||||||| ||||    
20011878 aaatatagtgaga--ttatggagtttgcttatgtttgttgaagagattga 20011925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 103; Significance: 7e-51; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 131 - 364
Target Start/End: Complemental strand, 24741 - 24520
Alignment:
131 gctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagata 230  Q
    ||||| || ||||||||||||  ||||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| |||||||||||||||||     
24741 gctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccagatc 24642  T
231 agtccgattacactctgtattatcaacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaa 330  Q
    |||||| ||||||||||||||||||||||||  |||||| ||| |||||||||||||||         |||| | |||||| |||||||||||| |||||    
24641 agtccg-ttacactctgtattatcaacctcagcaggcttctacgattcttgatcacaca---------ggaaaagttctatatcaaactattaaacccaa 24552  T
331 tagacttaagacctagctttacactttgtatggt 364  Q
    ||||||| ||| ||||  ||||||||||||||||    
24551 tagacttgagatctag--ttacactttgtatggt 24520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 71 - 283
Target Start/End: Original strand, 14791 - 15002
Alignment:
71 aaataaagagatgagagaagaatgatcacacaagaga-tttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat 169  Q
    |||| ||||||||||||||||| ||  |||||||||| ||||||||| ||| |  ||  ||||||| || ||||||||||||  |||||||||||||||     
14791 aaattaagagatgagagaagaaagagaacacaagagaatttatcctggttcgcctaac-cggctacgtccagtccccacactacgtgtgagattatccac 14889  T
170 tatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt 269  Q
    ||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||||  ||||||    
14890 tatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccagatcagtctg-ttacactctgtattatcaacctcagcaggctt 14988  T
270 ttacaattcttgat 283  Q
     ||| |||||||||    
14989 ctacgattcttgat 15002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 6e-45; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 154 - 365
Target Start/End: Complemental strand, 12415189 - 12414990
Alignment:
154 gtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattat 253  Q
    ||||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||  |||||||||||||||| |||||| ||||||||||||||||    
12415189 gtgtgagattatccattatagtatcctcttatcagaaacttcttaatagcactataataagttgatcacaccagatcagtccg-ttacactctgtattat 12415091  T
254 caacctcaataggcttttacaattcttgatcacacaagaaaggttggaacaattctatctcaaactattaagcccaatagacttaagacctagctttaca 353  Q
     ||||  |  |||||| ||| ||||||||||||||||||||         | |||||||||||||||||||||||||||||||| ||| ||||  |||||    
12415090 taaccatagcaggcttctacgattcttgatcacacaagaaa---------agttctatctcaaactattaagcccaatagacttgagatctag--ttaca 12415002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 23895620 - 23895863
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
23895620 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 23895719  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||| | ||||||||||||||| |||||| |||||| |||||||||||||||||  |||||| |||||||| |||  ||    || |||    
23895720 gactagcactacaatatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 23895817  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
23895818 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 23895863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 98 - 346
Target Start/End: Complemental strand, 22066476 - 22066226
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   ||||||||||     
22066476 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttcta 22066377  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 294  Q
    |  |  |||||||  | |||||||||| |||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
22066376 accaacactataaggtcttgatcacactagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 22066279  T
295 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
22066278 ggttggaacttttcctatctcaaactattaagcccaatagacttgagatctag 22066226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 98 - 346
Target Start/End: Complemental strand, 23884675 - 23884425
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||||| |||||||||| |||| ||||||||   |||   ||||||||||     
23884675 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattgtccactatagtatgcagttggtagaaacttcta 23884576  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 294  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
23884575 accaacactataaggtcttgatcacaccagatcagtccg--taaccactgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 23884478  T
295 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||||||||  || |||||||||||||||||||||||||||||| ||| ||||    
23884477 ggttggaactcttcctatctcaaactattaagcccaatagacttgagatctag 23884425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 98 - 262
Target Start/End: Original strand, 10259783 - 10259946
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||| ||| ||||| |||| | |||||||| ||||| ||||||| ||||| |||| |||| ||||||||| || ||  |||||||||||    
10259783 acacaggagaattattctggttcaccaaatccagctacttccagtcctcacacttcgtgtgggattctccactatagtatcctgctaagagaaacttctg 10259882  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaa 262  Q
    | ||| ||||||| || ||||||||||||||| |||||| |||||| ||||||||| ||||||||    
10259883 actagcactataaattcttgatcacaccagatcagtccg-ttacaccctgtattataaacctcaa 10259946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 98 - 255
Target Start/End: Original strand, 11421455 - 11421611
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    |||||||| | |||||||  ||||  |||| |||||||||| ||||||||||| | ||||||||||||||| ||||||||||||||| || ||| |||||    
11421455 acacaagataattatcctagttcatcaaatccggctacttccagtccccacacctcgtgtgagattatccactatagtatcatgttaacaaaaaattctg 11421554  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatca 255  Q
    | ||  |||||||  | ||||||||||||||| |||| | ||||||  ||||||||||    
11421555 actaacactataagatcttgatcacaccagatcagtctg-ttacaccatgtattatca 11421611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 104 - 229
Target Start/End: Complemental strand, 12173598 - 12173473
Alignment:
104 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaataga 203  Q
    |||||||||| |  ||||| ||| ||||||||||  ||||||||||| |||||| |||||||||| |||||||||||| || ||||||||| ||| |||     
12173598 gagatttatcatagttcaccaaactcggctactttcagtccccacaccttgtgtaagattatccactatagtatcatgctaacagaaacttatgactagc 12173499  T
204 actataatttgttgatcacaccagat 229  Q
    || |||| || |||||||||||||||    
12173498 accataaattcttgatcacaccagat 12173473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 109 - 337
Target Start/End: Complemental strand, 18420724 - 18420492
Alignment:
109 ttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttctgaatagaacta 207  Q
    |||||||| ||||| |||  |||||||||| |||||| |||| | |||||||||||| || ||||| | || || || ||||||||||||| ||| ||||    
18420724 ttatcctggttcacaaaacccggctacttccagtcccgacacctcgtgtgagattatacactatagttttcttgctaacagaaacttctgactagcacta 18420625  T
208 taatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt-----gatcacacaagaaaggttggaa 302  Q
      |  | ||||||||||||||| |||||| |||||| |||||||||||||||||  |||||| ||||||||||      ||  || ||||||||||||||    
18420624 acaaatcttgatcacaccagatcagtccg-ttacac-ctgtattatcaacctcagcaggcttatacaattctttgcacaatagcaaaagaaaggttggaa 18420527  T
303 caattctatct-caaactattaagcccaatagactt 337  Q
       |||||||| ||||||||||||||||||||||||    
18420526 -ttttctatctccaaactattaagcccaatagactt 18420492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 131 - 280
Target Start/End: Original strand, 23110256 - 23110404
Alignment:
131 gctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactataatttgttgatcacaccagata 230  Q
    |||||||| |||||||||||   |||| |||||||||| ||||||||   | || ||||||||||||| ||| ||||||  || ||||||||||||||||    
23110256 gctacttccagtccccacaccccgtgttagattatccactatagtattcggctaacagaaacttctgactagcactatatgttcttgatcacaccagata 23110355  T
231 agtccgattacactctgtattatcaacctcaataggcttttacaattctt 280  Q
    ||| | ||||||| |  |||||||||| |||| |||||| || |||||||    
23110356 agt-ctattacacccaatattatcaacatcaacaggcttctaaaattctt 23110404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 109 - 346
Target Start/End: Original strand, 17512238 - 17512476
Alignment:
109 ttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctgaatagaactat 208  Q
    |||||||| ||||| ||| ||||||||||  |||||||||||||  |||||||||||||| ||||||||   |||   |||||||||| |  |  |||||    
17512238 ttatcctggttcaccaaactcggctactttcagtccccacacttcttgtgagattatccactatagtatacagttggtagaaacttctaaccaacactat 17512337  T
209 aatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattcttgat---cacacaagaaaggttggaacaa 305  Q
    ||  | |||||||||| |||| |||| |  || || ||||||||||||||| |  |||||| ||||||||||  |   | ||| ||||||||||||||      
17512338 aaagtcttgatcacactagatcagtctg--ta-accctgtattatcaaccttagcaggcttctacaattctttgtttacgcacgagaaaggttggaactt 17512434  T
306 tt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    || |||||| ||||||||||||||||||||||| ||| ||||    
17512435 ttcctatctaaaactattaagcccaatagacttgagatctag 17512476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 280
Target Start/End: Complemental strand, 14102480 - 14102309
Alignment:
109 ttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttctgaatagaacta 207  Q
    |||||||| ||||| |||  |||||||||| ||||||||||| |  |||||||||||||| ||||| | || || || ||||||||| ||| ||| |||     
14102480 ttatcctggttcaccaaacccggctacttccagtccccacacctcttgtgagattatccactatagttgtcttgctaacagaaacttttgactagcactg 14102381  T
208 taatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 280  Q
    |||  | ||||||||| ||||| || ||  |||||| ||||||||| |||||||  || ||| ||||||||||    
14102380 taaggtcttgatcacaacagatcag-cctgttacaccctgtattattaacctcagcagacttctacaattctt 14102309  T

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Target: scaffold0028 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 94435 - 94678
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| |||||||||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
94435 acacaggagagttatcctggttcactaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 94534  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||||| ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
94535 gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 94632  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
94633 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 94678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 103876 - 104119
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||| ||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
103876 acacaggagagttatcctggttcaccaaacccggctaattccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 103975  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||||| ||||||||||||||| ||||||  ||  |||||||||||||||||||  |||||| |||||||| |||  ||    || |||    
103976 gactagcactacaatttcttgatcacaccagatcagtccg--taacctctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 104073  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
104074 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 104119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 98 - 346
Target Start/End: Complemental strand, 2292 - 2042
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    |||||||||| |||||||| ||||| |||  |||||||||| ||||||||||||| ||||||||||||||| ||||||||   |||   | ||||||||     
2292 acacaagagagttatcctggttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagttggtataaacttcta 2193  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt---gatcacacaagaaa 294  Q
    |  |  |||||||  | ||||||||||||||| ||||||  ||  | |||||||||||||||||  |||||| ||||||||||     || |||||||||    
2192 accaacactataaggtcttgatcacaccagatcagtccg--taatccctgtattatcaacctcagcaggcttctacaattctttgctttcgcacaagaaa 2095  T
295 ggttggaacaatt-ctatctcaaactattaagcccaatagacttaagacctag 346  Q
    |||||||||  || |||||||||||||||||||| ||||||||| ||| ||||    
2094 ggttggaactcttcctatctcaaactattaagccaaatagacttgagatctag 2042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 84 - 337
Target Start/End: Complemental strand, 3731 - 3474
Alignment:
84 agagaagaatgatcacacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgt 182  Q
    |||||||||  || ||||| |||| |||| ||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || ||     
3731 agagaagaagaataacacaggagaattattctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgc 3632  T
183 tatcagaaacttctgaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttg 281  Q
    || ||||||||||||| ||| |||| ||||| ||||||||||||||| |||| |  ||  |||||||||||||||||||  |||||| |||||||| |||    
3631 taacagaaacttctgactagcactacaatttcttgatcacaccagatcagtctg--taacctctgtattatcaacctcagcaggcttatacaattctttg 3534  T
282 atca----cacaagaaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
      ||    || ||||||||||||||   ||||||||| |||||||||||||||||||||||    
3533 cacactagcaaaagaaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 3474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 107 - 322
Target Start/End: Original strand, 27066 - 27289
Alignment:
107 atttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccat----tatagtatcatgttatcagaaacttctgaatag 202  Q
    ||||| ||||| |||| ||| ||||||||||| |||||||| |||| ||||||||||||||||    |||||||||    |||||||||||||| ||||     
27066 atttaacctgactcaccaaagtcggctacttccagtccccatacttcgtgtgagattatccatccactatagtatccaactatcagaaacttcttaataa 27165  T
203 aactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaaaggtt 298  Q
     ||||||  || |||||||||| |||| | | || ||||||||||||||||||||||||  |||||| |||||||||||     || |||||||||||||    
27166 cactatatgttcttgatcacactagatcaattcg-ttacactctgtattatcaacctcagcaggcttattacaattctttgctttcgcacaagaaaggtt 27264  T
299 ggaacaa-ttctatctcaaactatt 322  Q
    ||||||| |||| ||||||||||||    
27265 ggaacaatttctctctcaaactatt 27289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 58; Significance: 5e-24; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 98 - 337
Target Start/End: Original strand, 30827 - 31070
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  |||||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
30827 acacaggagagttatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 30926  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||  |||| ||| | ||||||||||||||| |||| | | |||| |||||||||||||||||  |||||| |||||||| |||  ||    || |||    
30927 gactaacactacaatattttgatcacaccagatcagtcag-taacac-ctgtattatcaacctcagcaggcttatacaattctttgcacactagcaaaag 31024  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
31025 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 31070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 98 - 280
Target Start/End: Complemental strand, 10225 - 10045
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagta-tcatgttatcagaaacttct 196  Q
    ||||| |||| ||||| || ||||| |||  |||||| ||| |||||||||||   ||||||||||||||| ||||||  || || || |||||||||||    
10225 acacatgagagttatcttggttcaccaaacacggcta-ttccagtccccacaccccgtgtgagattatccactatagttgtcttgctaacagaaacttct 10127  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattctt 280  Q
    || ||| |||||||  | | ||||||||||||| |||| | |||||| ||||||||||||||||||||||||| ||||||||||    
10126 gactagcactataaggtctagatcacaccagatcagtctg-ttacac-ctgtattatcaacctcaataggcttctacaattctt 10045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 98 - 337
Target Start/End: Complemental strand, 408512 - 408269
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatag-tatcatgttatcagaaacttct 196  Q
    ||||| |||| |||||||| ||||| |||  || ||||||| ||||||||||| | ||||||||||||||| ||||| | || || || |||||||||||    
408512 acacaggagagttatcctggttcaccaaacccgtctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttct 408413  T
197 gaatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggcttttacaattc-ttgatca----cacaag 291  Q
    || ||| |||| ||| | ||||||||||||||| |||||| | |||| ||||||||||||||||   |||||| |||||||| |||  ||    || |||    
408412 gactagcactacaatatcttgatcacaccagattagtccg-taacac-ctgtattatcaacctcttcaggcttatacaattctttgcacactagcaaaag 408315  T
292 aaaggttggaacaattctatctc-aaactattaagcccaatagactt 337  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||    
408314 aaaggttggaa-ttttctatctcaaaactattaagcccaatagactt 408269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 98 - 337
Target Start/End: Complemental strand, 257141 - 256901
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtatcatgttatcagaaacttctg 197  Q
    ||||| |||| |||||||| ||||| |||| |||||||||| ||||||||||||| |||||| |||||||| ||||||||   |||   ||||||||||     
257141 acacaggagagttatcctggttcaccaaatccggctacttccagtccccacacttcgtgtgaaattatccactatagtattcagttggtagaaacttcta 257042  T
198 aatagaactataatttgttgatcacaccagataagtccgattacactctgtattatcaacctcaataggctt-ttacaattctt---gatcacacaagaa 293  Q
    |  |  |||||||  | ||||||||||||||| ||| ||  ||  |||||||||||||||||||  | |||| |||||||||||     |  || |||||    
257041 accaacactataaagtcttgatcacaccagatcagttcg--taacctctgtattatcaacctcagcaagcttcttacaattctttgcactagcaaaagaa 256944  T
294 aggttggaacaattctatctcaaactattaagcccaatagactt 337  Q
    |||||||||   ||||||||||||||||| ||||||||||||||    
256943 aggttggaa-ttttctatctcaaactattcagcccaatagactt 256901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 403 - 488
Target Start/End: Complemental strand, 256832 - 256748
Alignment:
403 ttttacaaacacaaactcaaatagatagagagacaagtaaatatagtgagagcttatggagtttgcttatatttgttgaagagctt 488  Q
    ||||||||||||||||||||| |||||  || | || |||||||||||||||||||||||||||| ||   |||||||||||||||    
256832 ttttacaaacacaaactcaaagagataatgatataa-taaatatagtgagagcttatggagtttgattgcgtttgttgaagagctt 256748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 2265 - 2344
Alignment:
98 acacaagagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagtat 177  Q
    ||||| |||| |||||||| |||||  ||| ||||||||||||||||||||||||  |||||||||||||| ||||||||    
2265 acacaggagagttatcctggttcacccaatccggctacttctagtccccacacttcttgtgagattatccactatagtat 2344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 2410 - 2458
Alignment:
308 ctatctcaaactattaagcccaatagacttaagacctagctttacacttt 357  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||||    
2410 ctatctcaaactattaagcccaatagacttgagatctag-tttacacttt 2458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 12558 - 12629
Alignment:
104 gagatttatcctgattcactaaattcggctacttctagtccccacactttgtgtgagattatccattatagt 175  Q
    |||| |||||||| |||||  ||| |||||||||| |||||| |||||| ||||||||||||||| ||||||    
12558 gagagttatcctggttcacccaatccggctacttccagtccctacacttcgtgtgagattatccactatagt 12629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 286 - 322
Target Start/End: Original strand, 42161 - 42197
Alignment:
286 cacaagaaaggttggaacaattctatctcaaactatt 322  Q
    ||||||||||||| |||||||||| ||||||||||||    
42161 cacaagaaaggtttgaacaattctttctcaaactatt 42197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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