View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18491_low_47 (Length: 236)

Name: NF18491_low_47
Description: NF18491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18491_low_47
NF18491_low_47
[»] chr6 (17 HSPs)
chr6 (15-236)||(26505710-26505928)
chr6 (77-236)||(17857519-17857678)
chr6 (70-236)||(16375278-16375444)
chr6 (79-236)||(23220724-23220882)
chr6 (70-180)||(17084398-17084509)
chr6 (15-175)||(29161494-29161655)
chr6 (84-203)||(22463243-22463363)
chr6 (124-236)||(4228302-4228414)
chr6 (124-205)||(4172724-4172805)
chr6 (174-236)||(18104648-18104710)
chr6 (96-203)||(22594452-22594559)
chr6 (72-231)||(26523311-26523470)
chr6 (96-182)||(34965863-34965949)
chr6 (131-203)||(10445428-10445500)
chr6 (98-144)||(31162090-31162136)
chr6 (84-187)||(32351021-32351125)
chr6 (111-175)||(19853144-19853209)
[»] chr1 (14 HSPs)
chr1 (96-236)||(77047-77187)
chr1 (85-236)||(20822018-20822169)
chr1 (96-182)||(33396342-33396428)
chr1 (84-202)||(40437406-40437524)
chr1 (96-182)||(20193048-20193134)
chr1 (131-203)||(34392210-34392282)
chr1 (15-185)||(21224141-21224313)
chr1 (98-202)||(52400260-52400365)
chr1 (96-182)||(5769343-5769429)
chr1 (96-182)||(8539111-8539197)
chr1 (96-182)||(8604350-8604436)
chr1 (104-182)||(21194095-21194174)
chr1 (112-175)||(5471560-5471624)
chr1 (98-181)||(49998472-49998556)
[»] chr7 (29 HSPs)
chr7 (70-236)||(39292769-39292935)
chr7 (77-236)||(3193173-3193332)
chr7 (70-232)||(15979094-15979256)
chr7 (70-236)||(21675944-21676109)
chr7 (70-236)||(28719470-28719635)
chr7 (15-232)||(8564615-8564834)
chr7 (70-236)||(16382563-16382722)
chr7 (98-236)||(44306209-44306346)
chr7 (96-236)||(18080708-18080847)
chr7 (124-236)||(17985961-17986074)
chr7 (125-236)||(16369426-16369537)
chr7 (70-233)||(21539226-21539390)
chr7 (159-236)||(46473026-46473103)
chr7 (70-179)||(13617748-13617857)
chr7 (96-179)||(14276103-14276185)
chr7 (15-182)||(4483686-4483855)
chr7 (96-182)||(9322193-9322279)
chr7 (98-202)||(14939731-14939836)
chr7 (98-202)||(15367324-15367429)
chr7 (84-236)||(19066519-19066671)
chr7 (131-203)||(36301409-36301481)
chr7 (124-187)||(12183010-12183073)
chr7 (113-203)||(13350982-13351072)
chr7 (131-203)||(38294814-38294886)
chr7 (96-181)||(9643289-9643374)
chr7 (111-182)||(20584032-20584104)
chr7 (125-160)||(13463343-13463378)
chr7 (134-203)||(33556819-33556888)
chr7 (70-182)||(45148558-45148670)
[»] chr4 (21 HSPs)
chr4 (70-236)||(12134737-12134903)
chr4 (15-236)||(5371684-5371906)
chr4 (78-233)||(17376548-17376703)
chr4 (85-236)||(54364557-54364708)
chr4 (70-232)||(17212960-17213122)
chr4 (95-203)||(24237839-24237947)
chr4 (70-182)||(49070752-49070864)
chr4 (85-182)||(12733092-12733189)
chr4 (70-225)||(19558347-19558502)
chr4 (69-182)||(16226313-16226425)
chr4 (96-182)||(47469475-47469561)
chr4 (96-182)||(50221093-50221179)
chr4 (96-181)||(41917896-41917981)
chr4 (70-197)||(9651248-9651376)
chr4 (96-181)||(13593872-13593957)
chr4 (96-203)||(10238565-10238671)
chr4 (98-187)||(38763734-38763824)
chr4 (127-236)||(14570328-14570437)
chr4 (98-211)||(19082193-19082306)
chr4 (96-182)||(15014429-15014515)
chr4 (90-182)||(18240891-18240984)
[»] chr2 (16 HSPs)
chr2 (15-232)||(22331676-22331896)
chr2 (70-236)||(43641731-43641897)
chr2 (70-236)||(45618415-45618581)
chr2 (85-236)||(24561856-24562007)
chr2 (90-236)||(29113242-29113388)
chr2 (84-236)||(19434563-19434715)
chr2 (12-203)||(18534782-18534975)
chr2 (111-236)||(24840855-24840980)
chr2 (70-182)||(6093848-6093960)
chr2 (132-236)||(20272424-20272529)
chr2 (111-182)||(24276832-24276904)
chr2 (90-182)||(25133127-25133220)
chr2 (131-203)||(23799536-23799608)
chr2 (110-181)||(9635743-9635815)
chr2 (113-182)||(22787186-22787256)
chr2 (15-63)||(45618691-45618738)
[»] scaffold0317 (1 HSPs)
scaffold0317 (15-236)||(14836-15059)
[»] scaffold0013 (1 HSPs)
scaffold0013 (90-236)||(8215-8361)
[»] chr5 (12 HSPs)
chr5 (70-236)||(21108524-21108690)
chr5 (70-236)||(24226570-24226737)
chr5 (70-236)||(14342752-14342918)
chr5 (15-236)||(20455090-20455305)
chr5 (70-236)||(33627491-33627656)
chr5 (31-203)||(11964924-11965098)
chr5 (70-179)||(23414148-23414257)
chr5 (96-181)||(16836465-16836549)
chr5 (84-187)||(26560942-26561046)
chr5 (96-181)||(23235608-23235693)
chr5 (96-181)||(19872815-19872900)
chr5 (84-187)||(5622583-5622687)
[»] chr8 (22 HSPs)
chr8 (70-236)||(3845131-3845297)
chr8 (15-203)||(25756947-25757137)
chr8 (70-236)||(19332601-19332768)
chr8 (15-203)||(25294927-25295117)
chr8 (113-236)||(11543571-11543694)
chr8 (98-236)||(20176970-20177107)
chr8 (98-236)||(20221697-20221834)
chr8 (113-236)||(22312726-22312849)
chr8 (124-222)||(18119041-18119139)
chr8 (70-203)||(45560236-45560369)
chr8 (96-202)||(17500969-17501074)
chr8 (96-203)||(22498407-22498514)
chr8 (96-203)||(22886807-22886914)
chr8 (98-236)||(24906839-24906977)
chr8 (111-182)||(18042671-18042743)
chr8 (45-203)||(24238581-24238742)
chr8 (98-202)||(7469206-7469311)
chr8 (96-180)||(33171211-33171295)
chr8 (99-202)||(38636798-38636902)
chr8 (96-179)||(16001044-16001127)
chr8 (95-173)||(25609175-25609254)
chr8 (96-146)||(37654832-37654881)
[»] scaffold0183 (1 HSPs)
scaffold0183 (15-233)||(9769-9991)
[»] scaffold0090 (5 HSPs)
scaffold0090 (96-236)||(35795-35934)
scaffold0090 (70-168)||(1317-1415)
scaffold0090 (70-168)||(5697-5795)
scaffold0090 (163-236)||(4362-4435)
scaffold0090 (163-211)||(4-52)
[»] chr3 (19 HSPs)
chr3 (85-232)||(8603651-8603799)
chr3 (79-229)||(37917470-37917620)
chr3 (70-236)||(25105062-25105226)
chr3 (95-202)||(38376831-38376938)
chr3 (71-236)||(17759427-17759593)
chr3 (71-236)||(19060747-19060913)
chr3 (79-229)||(40040219-40040369)
chr3 (111-203)||(14181133-14181225)
chr3 (15-205)||(11401533-11401725)
chr3 (70-147)||(5229188-5229265)
chr3 (155-236)||(17392442-17392523)
chr3 (124-185)||(14969895-14969956)
chr3 (95-179)||(17319733-17319818)
chr3 (70-202)||(43428670-43428802)
chr3 (131-203)||(12918084-12918156)
chr3 (84-187)||(21167870-21167974)
chr3 (131-203)||(45804098-45804170)
chr3 (96-182)||(33370012-33370098)
chr3 (90-182)||(11516638-11516730)
[»] scaffold0079 (1 HSPs)
scaffold0079 (111-236)||(5111-5234)
[»] scaffold0231 (1 HSPs)
scaffold0231 (122-236)||(13951-14065)
[»] scaffold0017 (1 HSPs)
scaffold0017 (90-222)||(11617-11750)
[»] scaffold0009 (1 HSPs)
scaffold0009 (111-233)||(255385-255508)
[»] scaffold0601 (1 HSPs)
scaffold0601 (79-208)||(2119-2247)
[»] scaffold1278 (1 HSPs)
scaffold1278 (98-236)||(500-638)
[»] scaffold1957 (1 HSPs)
scaffold1957 (123-236)||(900-1013)
[»] scaffold0057 (1 HSPs)
scaffold0057 (90-182)||(4890-4982)
[»] scaffold0047 (1 HSPs)
scaffold0047 (90-236)||(76010-76154)
[»] scaffold0174 (1 HSPs)
scaffold0174 (111-228)||(21081-21198)
[»] scaffold0153 (1 HSPs)
scaffold0153 (90-182)||(811-903)
[»] scaffold0452 (1 HSPs)
scaffold0452 (128-233)||(8529-8634)
[»] scaffold0088 (1 HSPs)
scaffold0088 (96-180)||(44739-44823)
[»] scaffold0028 (1 HSPs)
scaffold0028 (126-236)||(39123-39233)
[»] scaffold1204 (2 HSPs)
scaffold1204 (27-168)||(1276-1419)
scaffold1204 (189-236)||(1228-1275)
[»] scaffold0357 (1 HSPs)
scaffold0357 (98-202)||(6682-6787)
[»] scaffold0049 (1 HSPs)
scaffold0049 (70-182)||(34591-34703)
[»] scaffold0561 (1 HSPs)
scaffold0561 (96-182)||(3963-4049)
[»] scaffold0258 (1 HSPs)
scaffold0258 (133-236)||(9120-9224)
[»] scaffold0005 (1 HSPs)
scaffold0005 (127-236)||(246939-247048)
[»] scaffold0468 (1 HSPs)
scaffold0468 (134-236)||(12096-12198)
[»] scaffold0193 (1 HSPs)
scaffold0193 (111-173)||(3641-3703)
[»] scaffold0165 (1 HSPs)
scaffold0165 (123-180)||(20996-21054)


Alignment Details
Target: chr6 (Bit Score: 165; Significance: 2e-88; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 15 - 236
Target Start/End: Original strand, 26505710 - 26505928
Alignment:
Q  15 aatatcaccattaattaacatatatgcaagtaatcaacatcaacaatattattaccaa-caattccatataatttttcacgatccaagtaaatgaggaaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||   || ||||||| |||||||||||||||||||| |||    
T  26505710 aatatcaccattaattaacatatatgcaagtaatcaacatcaacaacattattaccactcaa---caaataatttctcacgatccaagtaaatgagaaaa 26505806  T
Q  114 tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaat 213  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  26505807 tacaacacatt-tgataaacatcatattcaacacctaacaatcattcacatatcttcatttaatcatatcaaactatccacaaaagatttgccaagtaat 26505905  T
Q  214 tggtcttaaagattattttcgac 236  Q
    |||||||||||||||||||||||    
T  26505906 tggtcttaaagattattttcgac 26505928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 17857678 - 17857519
Alignment:
Q  77 tccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaa 176  Q
    |||||| || || |||| || ||||||||  || |||||||||||||||||||||| ||||| |||||||||||   |||||| |||||||||||| |||    
T  17857678 tccatacaagttctcacaattcaagtaaagaagaaaatacaacacattatgataaatatcatgttcaacacctagctatcattaacatatcttcatataa 17857579  T
Q  177 tcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  17857578 tcatatcaaactatccaaaaaagatttgccaagtatttggtcttaaagattattttcgac 17857519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 16375278 - 16375444
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| | |||| ||||| |||| || |||||||| ||| |||||||||||| ||||||||||||||||||| ||||||| |||||||||||| |||||    
T  16375278 caacaacttcatacaatttctcacaattcaagtaaaggagaaaatacaacacactatgataaacatcatattccacacctagaaatcattcacacatctt 16375377  T
Q  170 catttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||| |||||||||||||| |||| ||||| ||||  |||||| | ||||||||||||||||||||||    
T  16375378 catataatcatatcaaactatccccaaaatatttttcaagtattaggtcttaaagattattttcgac 16375444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 79 - 236
Target Start/End: Original strand, 23220724 - 23220882
Alignment:
Q  79 catataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatc 178  Q
    |||||||||| |||| || |||||||| ||| ||||  ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||     
T  23220724 catataatttctcacaattcaagtaaaggagaaaatgaaacacattatgataaacatcatattaaacacctagaaatcattcacatatcttcatataata 23220823  T
Q  179 atatcaaacaatcca-caaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||||||||  |||||  |||||||||| |||||| ||||||||||||||||||||||||    
T  23220824 atatcaaattatccagaaaaagatttggcaagtatttggtcttaaagattattttcgac 23220882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 17084509 - 17084398
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaa-cacctaaaaatcattcacatatct 168  Q
    |||||| |||||| ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  17084509 caacaactccatacaatttctcacaatacaagtaaatgagaaaatacaacacattatgataaacatcatattcaatcacctaaaaagcattcacatatct 17084410  T
Q  169 tcatttaatcat 180  Q
    |||| |||||||    
T  17084409 tcatataatcat 17084398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 175
Target Start/End: Complemental strand, 29161655 - 29161494
Alignment:
Q  15 aatatcaccattaattaacatatatgcaagtaatcaacatcaacaatattat-tac--caacaattccatataatttttcacgatccaagtaaatgagga 111  Q
    ||||||| ||| ||||||||||||||||| || ||||||||||| |||| || ||   | |||| |||||||| |||||||| ||||||||||| ||| |    
T  29161655 aatatcatcatcaattaacatatatgcaa-tattcaacatcaactatatcatatagttcgacaactccatatactttttcac-atccaagtaaaggagaa 29161558  T
Q  112 aatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcattta 175  Q
    |||||  ||||||||||||||||||||||||||||| ||| ||| | |||||||||||||||||    
T  29161557 aatacttcacattatgataaacatcatattcaacacttaacaattactcacatatcttcattta 29161494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 84 - 203
Target Start/End: Complemental strand, 22463363 - 22463243
Alignment:
Q  84 aatttttcacgatccaagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatat 182  Q
    ||||| |||| ||||||||||| ||||||| |||||||| |||||||||||||||||||||| |||| | ||| | ||||||||||||||| ||||||||    
T  22463363 aatttctcacaatccaagtaaaggaggaaaatacaacaccttatgataaacatcatattcaagacctcacaattactcacatatcttcattcaatcatat 22463264  T
Q  183 caaacaatccacaaaagattt 203  Q
     || | || ||||||||||||    
T  22463263 aaagctattcacaaaagattt 22463243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 4228414 - 4228302
Alignment:
Q  124 tatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaa 223  Q
    |||||||||||||||||||||||||||  ||||||||| | || ||||| ||||||| |||||| || |||||||||||||| |  || | |||||||||    
T  4228414 tatgataaacatcatattcaacacctatcaatcattcatacatattcatataatcatgtcaaactattcacaaaagatttgcaagatattcggtcttaaa 4228315  T
Q  224 gattattttcgac 236  Q
    ||| |||||||||    
T  4228314 gatcattttcgac 4228302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 4172805 - 4172724
Alignment:
Q  124 tatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgc 205  Q
    |||||||||||||||||||||||||||  ||||||||| | |||||||| ||||||| |||||| || ||||||||||||||    
T  4172805 tatgataaacatcatattcaacacctatcaatcattcatacatcttcatataatcatgtcaaactattcacaaaagatttgc 4172724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 18104710 - 18104648
Alignment:
Q  174 taatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    |||||||||||||| |||||| |||||||||||||||| ||| ||||||||||||||||||||    
T  18104710 taatcatatcaaactatccacgaaagatttgccaagtatttgatcttaaagattattttcgac 18104648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 22594559 - 22594452
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaa-aaatcattcacatatcttcatttaatcatatcaaacaatccac 194  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||| |||||||||| || ||| ||| |||||||||| ||||||||| || | || ||     
T  22594559 tccaagtaaa-gaggaaatacaacaccttatgatgaacatcatatccaacacctaacaagtcactcaaatatcttcatataatcatataaatctattcat 22594461  T
Q  195 aaaagattt 203  Q
    |||||||||    
T  22594460 aaaagattt 22594452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 26523470 - 26523311
Alignment:
Q  72 acaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaa-aatcattcacatatcttc 170  Q
    |||||| |||||||||| |||| || |||||||   | |||||||| || | ||| |||  |||||||||||||||||||  ||||||||||| ||||||    
T  26523470 acaatttcatataatttctcacaattcaagtaacgaaagaaatacatcatactattatat-catcatattcaacacctaactaatcattcacacatcttc 26523372  T
Q  171 atttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattt 231  Q
     | |||||||||||| | || |||||||||||||  ||||| | |||||||||||| ||||    
T  26523371 gtataatcatatcaagctatacacaaaagatttgaaaagtactcggtcttaaagatcattt 26523311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 34965863 - 34965949
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaa-aaatcattcacatatcttcatttaatcatat 182  Q
    |||||||||| ||| ||||| ||||| |||||||||| ||||||||||||| |||| || ||||| ||||||||||||||||||||||    
T  34965863 tccaagtaaa-gagaaaataaaacaccttatgataaatatcatattcaacatctaacaattcatttacatatcttcatttaatcatat 34965949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 10445428 - 10445500
Alignment:
Q  131 aacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagattt 203  Q
    ||||||||||||||||| ||  ||||||||| |||||| ||| |||||||||||||  |||||||||||||||    
T  10445428 aacatcatattcaacacatagcaatcattcaaatatctccatataatcatatcaaattatccacaaaagattt 10445500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 31162136 - 31162090
Alignment:
Q  98 caagtaaatgaggaaatacaacacattatgataaacatcatattcaa 144  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  31162136 caagtaaaggagaaaatacaacaccttatgataaacatcatattcaa 31162090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 32351021 - 32351125
Alignment:
Q  84 aatttttcacgatccaagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatat 182  Q
    ||||| |||| ||||| ||||| ||||||| |||||||| || |||||||| ||| ||||||||| ||  | | | ||||||||||||||| ||||||||    
T  32351021 aatttgtcaccatccacgtaaaagaggaaaatacaacaccttgtgataaacctcacattcaacacttaccatttactcacatatcttcattcaatcatat 32351120  T
Q  183 caaac 187  Q
     ||||    
T  32351121 aaaac 32351125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 19853144 - 19853209
Alignment:
Q  111 aaatacaacacattatgataaacatcatattcaacacctaa-aaatcattcacatatcttcattta 175  Q
    |||||||||||  ||||||||| ||||||| |||||| ||| || ||||||||| |||||||||||    
T  19853144 aaatacaacaccctatgataaatatcatatccaacacttaacaattcattcacacatcttcattta 19853209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 6e-55; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 96 - 236
Target Start/End: Complemental strand, 77187 - 77047
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccaca 195  Q
    |||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| |||||||    
T  77187 tccaagtaaaagagaaaatacaacactttatgataaacatcatattcaacacctaacaatcattcacatatcttcatataatcataacaaactatccaca 77088  T
Q  196 aaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  77087 aaagatttgccaagtatttggtcttaaagattattttcgac 77047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 236
Target Start/End: Original strand, 20822018 - 20822169
Alignment:
Q  85 atttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatca 184  Q
    |||| |||| |||||| |||| ||| ||||||  ||||||||||||||||| ||||||||||||||  |||||| ||||||||||||| |||||||| ||    
T  20822018 atttctcacaatccaaataaaggagaaaatacttcacattatgataaacattatattcaacacctagcaatcatccacatatcttcatataatcataaca 20822117  T
Q  185 aacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||| |||||||||| |||||| ||||| ||||||||||||||||||| ||||    
T  20822118 aactatccacaaaatatttgcaaagtatttggtcttaaagattatttccgac 20822169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 33396342 - 33396428
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatat 182  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  33396342 tccaagtaaatgagaaaatacaacaccttacgataaacatcatattcaacacctagcaatcattcacatatcttcatataatcatat 33396428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 202
Target Start/End: Complemental strand, 40437524 - 40437406
Alignment:
Q  84 aatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatc 183  Q
    ||||| |||| ||||||||||| |||||||||||| || |||||||||||||||| |||||||||||| ||| | ||||||| ||||||||||||||||     
T  40437524 aatttctcacaatccaagtaaaggaggaaatacaataccttatgataaacatcatgttcaacacctaacaattactcacataacttcatttaatcatata 40437425  T
Q  184 aaacaatccacaaaagatt 202  Q
    ||   || |||||||||||    
T  40437424 aagttattcacaaaagatt 40437406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 20193048 - 20193134
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatat 182  Q
    |||||||||| ||| |||| |||||| ||||||||||||||||||||||| | ||| ||||||  | ||||||||||||||||||||    
T  20193048 tccaagtaaaggagaaaatgcaacaccttatgataaacatcatattcaacgcttaacaatcatctaaatatcttcatttaatcatat 20193134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 34392210 - 34392282
Alignment:
Q  131 aacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagattt 203  Q
    ||||||||||||||||||||  ||||||||| |||||| ||| |||||||||||||  |||||||||||||||    
T  34392210 aacatcatattcaacacctagcaatcattcaaatatctccatataatcatatcaaattatccacaaaagattt 34392282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 185
Target Start/End: Original strand, 21224141 - 21224313
Alignment:
Q  15 aatatcaccattaattaacatatatgcaagtaatcaacatcaacaatattattac----caacaattccatataatttttcacgatccaagtaaatgagg 110  Q
    ||||||||||| ||||| | |||||| || ||||||||| |||| | || |||||    |||||| |||||| ||||| |||| || |||||||| |||     
T  21224141 aatatcaccatcaattagcttatatgtaa-taatcaacaacaactacatcattacatctcaacaactccatacaatttctcacaattcaagtaaaggaga 21224239  T
Q  111 aaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaa 185  Q
    ||   || || |||||||||  |||||||||||||||| || |||||||||||||||||||| |||| |||||||    
T  21224240 aagcgcaccatattatgatat-catcatattcaacacccaataatcattcacatatcttcatgtaattatatcaa 21224313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 52400260 - 52400365
Alignment:
Q  98 caagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaa 196  Q
    |||||||| ||||||| |||||||| |||||||||| ||||||||||| |||| | ||| | ||||||||||||| | |||||||| |||| |  |||||    
T  52400260 caagtaaaggaggaaaatacaacaccttatgataaatatcatattcaagacctcacaattagtcacatatcttcactcaatcatataaaactaatcacaa 52400359  T
Q  197 aagatt 202  Q
    ||||||    
T  52400360 aagatt 52400365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 5769429 - 5769343
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaa-tcattcacatatcttcatttaatcatat 182  Q
    |||||||||| ||| |||| |||||| |||||||||| ||||||||| ||| |||| || ||||||||||||||||||||| ||||||    
T  5769429 tccaagtaaa-gagaaaatgcaacaccttatgataaatatcatattcgacatctaacaactcattcacatatcttcatttagtcatat 5769343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 8539197 - 8539111
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaa-aaatcattcacatatcttcatttaatcatat 182  Q
    |||||||||| ||| ||||||||||| |||||||||| ||||||| |||||  ||| || ||||||||| ||||||||||| ||||||    
T  8539197 tccaagtaaa-gagaaaatacaacacgttatgataaatatcatatccaacatataacaattcattcacacatcttcatttagtcatat 8539111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 8604436 - 8604350
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaa-aaatcattcacatatcttcatttaatcatat 182  Q
    |||||||||| ||| ||||||||||| |||||||||| ||||||| |||||  ||| || ||||||||| ||||||||||| ||||||    
T  8604436 tccaagtaaa-gagaaaatacaacacgttatgataaatatcatatccaacatataacaattcattcacacatcttcatttagtcatat 8604350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 182
Target Start/End: Original strand, 21194095 - 21194174
Alignment:
Q  104 aatgaggaaatacaacacattatgataaacatcatattcaacaccta-aaaatcattcacatatcttcatttaatcatat 182  Q
    |||||| ||||||||||| |||||||||| ||||||| |||||  ||  || ||||||||| ||||||||||| ||||||    
T  21194095 aatgagaaaatacaacactttatgataaatatcatatccaacatatatcaattcattcacacatcttcatttagtcatat 21194174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 5471624 - 5471560
Alignment:
Q  112 aatacaacacattatgataaacatcatattcaacacctaa-aaatcattcacatatcttcattta 175  Q
    |||||||||| |||||||||||||||||| ||| || ||| || ||||||||| | |||||||||    
T  5471624 aatacaacaccttatgataaacatcatatccaaaacttaacaattcattcacacaccttcattta 5471560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 181
Target Start/End: Complemental strand, 49998556 - 49998472
Alignment:
Q  98 caagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcata 181  Q
    |||||||| ||||||| |||||||| ||||| |||| |||||||||||  ||| | ||| | ||||||||||||||  |||||||    
T  49998556 caagtaaaggaggaaaatacaacaccttatgttaaatatcatattcaaggcctcacaattactcacatatcttcatccaatcata 49998472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 9e-54; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 39292935 - 39292769
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| |||||| ||||| |||| || || ||||| |||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39292935 caacaactccatacaatttctcacaatacacgtaaaggagagaatacaacacattatgataaacatcatattcaacacctagaaatcattcacatatctt 39292836  T
Q  170 catttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||| |||||||||||||| |||||||||  |||||||||||| ||||||||||||||||||||||||    
T  39292835 catataatcatatcaaactatccacaaacaatttgccaagtatttggtcttaaagattattttcgac 39292769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 3193332 - 3193173
Alignment:
Q  77 tccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaa 176  Q
    |||||| || || |||| || |||||||| ||| |||||| ||| ||||||||||||||||||||||| |||||  |||||||||||||||||||| |||    
T  3193332 tccatacaagttctcacaattcaagtaaaggagaaaatacgacaaattatgataaacatcatattcaatacctagcaatcattcacatatcttcatataa 3193233  T
Q  177 tcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3193232 tcatatcaaactatccacaaaagatttgccaagtatttggtcttaaagattattttcgac 3193173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 70 - 232
Target Start/End: Complemental strand, 15979256 - 15979094
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| | |||| ||||| |||| |||||||||||  || ||||||| ||||||| ||||||||| ||||||||||||||||||||||||| |||||||    
T  15979256 caacaacttcatacaatttctcacaatccaagtaaagtagaaaatacatcacattaggataaacataatattcaacacctaaaaatcattcatatatctt 15979157  T
Q  170 catttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattatttt 232  Q
    ||| |||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||    
T  15979156 catataatcatatcaaactatccacaaaagatttgccaagtatttggtcttaacgattatttt 15979094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 21676109 - 21675944
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| |||||| ||||| |||| || |||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||    
T  21676109 caacaactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatcatattcaacacctataaagcattcacatatatt 21676010  T
Q  170 catttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||| || |||||  |||| ||||||||||||||||||||||| |||||||| |||||||||| ||||    
T  21676009 catatagtcatagaaaactatccacaaaagatttgccaagtatttggtctt-aagattatttccgac 21675944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 28719470 - 28719635
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| |||||| ||||| |||  || |||||||| ||| ||||||||||||||||||||||||||||||||||||| |  ||| ||||||||||||||    
T  28719470 caacaactccatacaatttctcaaaattcaagtaaaagagaaaatacaacacattatgataaacatcatattcaacacatgtaaagcattcacatatctt 28719569  T
Q  170 catttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||| |||||||||||||  ||||||||||||||| ||||||| |||||||| |||||||||||||||    
T  28719570 catataatcatatcaaattatccacaaaagattttccaagtatttggtctt-aagattattttcgac 28719635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 15 - 232
Target Start/End: Complemental strand, 8564834 - 8564615
Alignment:
Q  15 aatatcaccattaattaacatatatgcaagtaatcaacatcaacaatattat-tac--caacaattccatataatttttcacgatccaagtaaatgagga 111  Q
    |||||||| || ||||||||||||||||  |||||||||||||| |||| || ||   |||||| ||||||  |||| |||| || |||||||| ||| |    
T  8564834 aatatcacaatcaattaacatatatgcat-taatcaacatcaactatatcatatagttcaacaactccatacgatttctcacaattcaagtaaaggagaa 8564736  T
Q  112 aatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagta 211  Q
     ||||||||||  ||||||||||||||||||| ||| || ||| ||||||||||||||||| |||||||| ||||| ||||||| ||||||| |||||||    
T  8564735 catacaacacacaatgataaacatcatattcagcacttagaaagcattcacatatcttcatataatcatagcaaactatccacataagattttccaagta 8564636  T
Q  212 attggtcttaaagattatttt 232  Q
     |||| |||||||||||||||    
T  8564635 tttggacttaaagattatttt 8564615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 16382563 - 16382722
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| |||||||| ||| |||  ||||||||||| ||| ||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||    
T  16382563 caacaactccatatactttctcataatccaagtaaaggagaaaatacaacaccttataataaacatcatattcaacacctaacaatcattcacatatctt 16382662  T
Q  170 catttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||| |||||||| | ||| |||| ||||||       ||||||||||||||||||||||||||||||    
T  16382663 catataatcataacgaactatccgcaaaag-------aagtaattggtcttaaagattattttcgac 16382722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 98 - 236
Target Start/End: Complemental strand, 44306346 - 44306209
Alignment:
Q  98 caagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaa 197  Q
    |||||||| ||| ||||||||||| |||| |||||||||| ||||||||| ||  |||||||||||||||||||| |||||||||||||| |||||||||    
T  44306346 caagtaaaggagaaaatacaacaccttataataaacatcacattcaacacatagtaatcattcacatatcttcatataatcatatcaaactatccacaaa 44306247  T
Q  198 agatttgccaagtaattggtcttaaagattattttcgac 236  Q
    |||||| ||||||| ||||||||  ||||||||||||||    
T  44306246 agattttccaagtatttggtctt-tagattattttcgac 44306209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 96 - 236
Target Start/End: Complemental strand, 18080847 - 18080708
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccaca 195  Q
    |||||||||| ||| |||||||| || ||||||| |||||||||| |||  ||||| |||||||||||||||||||  ||||||||| || | |||||||    
T  18080847 tccaagtaaa-gagaaaatacaatacgttatgatgaacatcatatccaatgcctaacaatcattcacatatcttcacataatcatataaagctatccaca 18080749  T
Q  196 aaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  18080748 aaagattttccaagtaattggtcttaaagattattttcgac 18080708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 17986074 - 17985961
Alignment:
Q  124 tatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaattggtc-ttaa 222  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||| ||| |||||| ||||    
T  17986074 tatgataaacatcatattcaacacttagcaatcattcacatatcttcatataattatatcaaactatccacaaaagatttgccatgtatttggtctttaa 17985975  T
Q  223 agattattttcgac 236  Q
    ||||||||||||||    
T  17985974 agattattttcgac 17985961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 125 - 236
Target Start/End: Complemental strand, 16369537 - 16369426
Alignment:
Q  125 atgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaag 224  Q
    |||||| |||||||||||||| |||| |||||||||| | |||| ||| || ||||||||||| |||||||||||||||| |||||| ||||||||||||    
T  16369537 atgatacacatcatattcaactcctataaatcattcatacatctacatatagtcatatcaaactatccacaaaagatttgtcaagtatttggtcttaaag 16369438  T
Q  225 attattttcgac 236  Q
    |||| |||||||    
T  16369437 attactttcgac 16369426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 233
Target Start/End: Complemental strand, 21539390 - 21539226
Alignment:
Q  70 caacaattccatataatttttcacga-tccaagtaaatgaggaaatacaacacattatgataaac-atcatattcaacacctaaaaatcattcacatatc 167  Q
    |||||| |||||| ||||| |||| | |||||||||  ||| ||||||| ||||| ||||||||  ||||||||||| | |||  |||||||||||||||    
T  21539390 caacaactccatacaatttctcacaaatccaagtaag-gagaaaatacatcacatcatgataaaatatcatattcaatatctagcaatcattcacatatc 21539292  T
Q  168 ttcatttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttc 233  Q
    ||||| ||| |||| | ||| |||||| |||||||||||||||| | |||||||||||||||||||    
T  21539291 ttcatataaacataaccaactatccaccaaagatttgccaagtattaggtcttaaagattattttc 21539226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 46473026 - 46473103
Alignment:
Q  159 tcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  46473026 tcacatatcttcatataatcatatcaaactatccacaaaagatttgctaagtatttgatcttaaagattattttcgac 46473103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 13617748 - 13617857
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| |||||| | ||| ||||  |||||||||| ||| ||||||||||| |||| |||||||||||||||| ||||||| ||||||||| |||||||    
T  13617748 caacaactccatacactttctcacattccaagtaaaggagaaaatacaacaccttataataaacatcatattcagcacctaacaatcattcaaatatctt 13617847  T
Q  170 catttaatca 179  Q
     |||||||||    
T  13617848 aatttaatca 13617857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 14276185 - 14276103
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatca 179  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||||||  ||||||| ||||| |||||||||||||    
T  14276185 tccaagtaaa-gatgaaatacaacaccttatgataaacatcatattcaacacctatcaatcattaacataacttcatttaatca 14276103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 4483686 - 4483855
Alignment:
Q  15 aatatcaccattaattaacatatatgcaagtaatcaacatcaacaatattat-tac--caacaattccatataatttttcacgatccaagtaaatgagga 111  Q
    |||||||| || ||| ||||||||||||  |||||||||||||| |||| || ||   |||||| |||||| ||||| |||| || ||| |||| | | |    
T  4483686 aatatcacaatcaatcaacatatatgcat-taatcaacatcaactatatcatatagttcaacaactccatacaatttctcacaattcaaataaaggggaa 4483784  T
Q  112 aatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatat 182  Q
    ||||||||| |||||||||||||||||||||||||| |  |||  ||| ||||||||||||||| ||||||    
T  4483785 aatacaacatattatgataaacatcatattcaacacatgtaaagaatttacatatcttcatttagtcatat 4483855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 9322279 - 9322193
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaa-aaatcattcacatatcttcatttaatcatat 182  Q
    |||||||||| ||| |||| |||||| |||||||||| |||||||||||||||||| || ||||||||||||||||||||| ||||||    
T  9322279 tccaagtaaa-gagaaaatgcaacaccttatgataaatatcatattcaacacctaacaattcattcacatatcttcatttagtcatat 9322193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 14939731 - 14939836
Alignment:
Q  98 caagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaa 196  Q
    |||||||| ||||||| |||||||| |||||||||| ||||||||||| |||| | ||| | ||||||||||||||| |||||||| |||| |  |||||    
T  14939731 caagtaaaggaggaaaatacaacaccttatgataaatatcatattcaagacctcacaattactcacatatcttcattcaatcatataaaactaatcacaa 14939830  T
Q  197 aagatt 202  Q
    ||||||    
T  14939831 aagatt 14939836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 15367324 - 15367429
Alignment:
Q  98 caagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaa 196  Q
    |||||||| ||||||| |||||||| |||||||||| ||||||||||| |||| | ||| | ||||||||||||||| |||||||| |||| |  |||||    
T  15367324 caagtaaaggaggaaaatacaacaccttatgataaatatcatattcaagacctcacaattactcacatatcttcattcaatcatataaaactaatcacaa 15367423  T
Q  197 aagatt 202  Q
    ||||||    
T  15367424 aagatt 15367429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 236
Target Start/End: Original strand, 19066519 - 19066671
Alignment:
Q  84 aatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatc 183  Q
    ||||| |||| || |||||||| ||  ||||||||||||||||||||||| |||| |||| ||||||| |||||||||||||||| ||  |||||||  |    
T  19066519 aatttctcacaattcaagtaaaagaaaaaatacaacacattatgataaacctcatgttcagcacctaacaatcattcacatatctccacataatcatcac 19066618  T
Q  184 aaacaatccacaaaagatttgccaagtaattggt-cttaaagattattttcgac 236  Q
    |||| || | |||| | |||| |||||| ||||| || ||| ||||||||||||    
T  19066619 aaactattctcaaaggttttg-caagtatttggtcctcaaatattattttcgac 19066671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 36301481 - 36301409
Alignment:
Q  131 aacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagattt 203  Q
    ||||||||||||||||||||  ||||||||| |||||| ||| |||||||||||||  |||||||||||||||    
T  36301481 aacatcatattcaacacctagcaatcattcaaatatctccatataatcatatcaaattatccacaaaagattt 36301409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 12183010 - 12183073
Alignment:
Q  124 tatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaac 187  Q
    ||||||||||||||||||||||| ||| |||||||||||| | |||||| ||||||||||||||    
T  12183010 tatgataaacatcatattcaacatctataaatcattcacacaacttcatataatcatatcaaac 12183073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 13350982 - 13351072
Alignment:
Q  113 atacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagattt 203  Q
    ||||| ||| ||||| |||||||||||||||| |||||| |||||||||||||| ||| ||||||||||| || | || |||||| |||||    
T  13350982 atacatcaccttatggtaaacatcatattcaatacctaagaatcattcacatatattcttttaatcatataaagctattcacaaatgattt 13351072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 38294814 - 38294886
Alignment:
Q  131 aacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagattt 203  Q
    ||||||||||||||||||||  ||||||||| |||||| ||| ||||||||||||   |||||||||||||||    
T  38294814 aacatcatattcaacacctagcaatcattcaaatatctccatataatcatatcaatttatccacaaaagattt 38294886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 9643289 - 9643374
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaa-aaatcattcacatatcttcatttaatcata 181  Q
    |||||||||| || |||||||||||| ||||||| |||||||||| ||||| |||| || ||| ||||||| |||||||||||||||    
T  9643289 tccaagtaaa-gatgaaatacaacaccttatgatgaacatcatatccaacatctaacaagtcactcacataacttcatttaatcata 9643374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 20584104 - 20584032
Alignment:
Q  111 aaatacaacacattatgataaacatcatattcaacacctaa-aaatcattcacatatcttcatttaatcatat 182  Q
    |||||||||||  ||||||||||||||||| |||||| ||| || |||||||| |||||||||||| ||||||    
T  20584104 aaatacaacaccctatgataaacatcatatccaacacttaacaattcattcacgtatcttcatttagtcatat 20584032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 160
Target Start/End: Original strand, 13463343 - 13463378
Alignment:
Q  125 atgataaacatcatattcaacacctaaaaatcattc 160  Q
    ||||||||||||||||||||||||||||||||||||    
T  13463343 atgataaacatcatattcaacacctaaaaatcattc 13463378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 33556888 - 33556819
Alignment:
Q  134 atcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagattt 203  Q
    ||||||| |||||||||  ||| ||||| |||||| ||| |||||||||||||  |||||||||||||||    
T  33556888 atcatatacaacacctagcaattattcaaatatctccatataatcatatcaaattatccacaaaagattt 33556819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 182
Target Start/End: Original strand, 45148558 - 45148670
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| |||||||| | | |||| | ||||||||||||| ||||||||  ||||| ||||||| ||  || ||| || ||  | |||||||||||||||    
T  45148558 caacaactccatatactatctcacaaaccaagtaaatgagaaaatacaatgcattaggataaacctcgcatacaaaacttagcactcattcacatatctt 45148657  T
Q  170 catttaatcatat 182  Q
    |||| ||||||||    
T  45148658 cattcaatcatat 45148670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 9e-54; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 12134903 - 12134737
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| |||||||| ||| |||| ||||||||||| ||| ||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||    
T  12134903 caacaactccatatactttctcacaatccaagtaaaagagaaaatacaacactttatgataaacatcatattcaaaacctaacaatcattcacatatctt 12134804  T
Q  170 catttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||| |||||||| ||||| || |||||||||||||||||||| ||||| ||||||||||||||||||    
T  12134803 catataatcataacaaactatacacaaaagatttgccaagtatttggtgttaaagattattttcgac 12134737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 236
Target Start/End: Complemental strand, 5371906 - 5371684
Alignment:
Q  15 aatatcaccattaattaacatatatgcaagtaatcaacatcaacaatat--tattaccaacaattccatataatttttcacgatccaagtaaatgaggaa 112  Q
    |||||||| || ||| ||||||||||||  |||||||||||||| ||||  |||   |||||| |||||| | ||| |||| || || | ||| ||| ||    
T  5371906 aatatcacaatcaatcaacatatatgcat-taatcaacatcaactatatcatatagtcaacaactccatacagtttctcacaattcaggcaaaggagaaa 5371808  T
Q  113 atacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaa 212  Q
    ||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||     
T  5371807 atacaacacattatgataaacatcatattcaacacatagaaaacattcacatatcttcatataatcatatcaaactatccacaaaagatttgccaagtat 5371708  T
Q  213 ttggtcttaaagattattttcgac 236  Q
    ||  ||||||||||||||||||||    
T  5371707 ttactcttaaagattattttcgac 5371684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 78 - 233
Target Start/End: Complemental strand, 17376703 - 17376548
Alignment:
Q  78 ccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaat 177  Q
    ||||||||||| |||| || |||||||| ||| |||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||||  |||    
T  17376703 ccatataatttctcacaattcaagtaaaggagaaaatacaacacactatgataaacatcatattcaacacttagaaagcattcacatatcttcatacaat 17376604  T
Q  178 catatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttc 233  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||||||| |||||    
T  17376603 catatcaaactatccacaaaagattttccaagtatttggtcttaaagattcttttc 17376548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 85 - 236
Target Start/End: Complemental strand, 54364708 - 54364557
Alignment:
Q  85 atttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatca 184  Q
    |||| |||| ||||||||||| ||| ||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||| | |||||||||||    
T  54364708 atttctcacaatccaagtaaaggagaaaatacaacaccttatgataaatatcatattcaacacctaacaatcattcacatatcttcgtataatcatatca 54364609  T
Q  185 aacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||| ||| ||||||||||| ||||||| |||| | |||||||||||||||||    
T  54364608 aactatctacaaaagattttccaagtatttgggcctaaagattattttcgac 54364557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 70 - 232
Target Start/End: Complemental strand, 17213122 - 17212960
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| | |||| ||||| |||| || |||||||| ||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||| || ||    
T  17213122 caacaacttcatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatcatattcaacacctagcaatcattcacacatttt 17213023  T
Q  170 catttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattatttt 232  Q
    ||| |||||||||||||| |||||||||||||||| ||| || ||| ||||||||||||||||    
T  17213022 catataatcatatcaaactatccacaaaagatttgtcaaatatttgatcttaaagattatttt 17212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 24237839 - 24237947
Alignment:
Q  95 atccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccac 194  Q
    ||||||||||| ||| |||||||| || |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| || | || |||    
T  24237839 atccaagtaaaggagaaaatacaaaaccttatgataaatatcatattcaacacctaaaaatcattaacatatcttcatttaatcatataaagctattcac 24237938  T
Q  195 aaaagattt 203  Q
     ||||||||    
T  24237939 gaaagattt 24237947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 70 - 182
Target Start/End: Original strand, 49070752 - 49070864
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| |||||||| ||| |||| ||||||||||| |||  |||||||||| |||| ||||| |||||||||||||||||| ||||| |||||||||||    
T  49070752 caacaactccatatactttctcacaatccaagtaaaggagagaatacaacaccttatcataaatatcatattcaacacctaacaatcactcacatatctt 49070851  T
Q  170 catttaatcatat 182  Q
    |||||||||||||    
T  49070852 catttaatcatat 49070864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 182
Target Start/End: Original strand, 12733092 - 12733189
Alignment:
Q  85 atttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatat 182  Q
    |||| |||| || |||||||| ||| ||||||||||| |||||||||||||||| |||||||| ||| ||| |||||||||||||||||| |||||||    
T  12733092 atttctcacaatacaagtaaaggagaaaatacaacaccttatgataaacatcatgttcaacacgtaacaattattcacatatcttcatttgatcatat 12733189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 19558347 - 19558502
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| || ||| ||||| |||| || |||||||| ||| |||||||||||||||||||||||||||||| |||||| |  | | ||||||||| ||||    
T  19558347 caacaactcgatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatcatatccaacacatgtagagcattcacatgtctt 19558446  T
Q  170 catttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaaga 225  Q
    ||| ||||||||| |  | || ||| ||||||||   ||||||||||| |||||||    
T  19558447 catataatcatataaggctattcacgaaagatttataaagtaattggttttaaaga 19558502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 182
Target Start/End: Complemental strand, 16226425 - 16226313
Alignment:
Q  69 ccaacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatct 168  Q
    ||||||| |||||| ||||  |||| ||||||||||  ||| ||||||||||||||||||||||  |||||||||||||||| ||   ||||||| |||     
T  16226425 ccaacaactccatacaattcctcacaatccaagtaac-gagaaaatacaacacattatgataaatttcatattcaacacctagaagaaattcacacatca 16226327  T
Q  169 tcatttaatcatat 182  Q
    ||||||||||||||    
T  16226326 tcatttaatcatat 16226313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 47469561 - 47469475
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaat-cattcacatatcttcatttaatcatat 182  Q
    |||||||||| ||| |||| |||||| |||||||||| ||||||||  || ||||||||| |||||||||||||||||||||||||||    
T  47469561 tccaagtaaa-gagaaaatgcaacaccttatgataaatatcatatttcacgcctaaaaattcattcacatatcttcatttaatcatat 47469475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 50221179 - 50221093
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaat-cattcacatatcttcatttaatcatat 182  Q
    |||||||||| ||| |||| |||||| |||||||||| |||||||| ||||||||| ||| |||||||||||||||||||| ||||||    
T  50221179 tccaagtaaa-gagaaaatgcaacaccttatgataaatatcatattaaacacctaacaattcattcacatatcttcatttagtcatat 50221093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 41917981 - 41917896
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaa-aaatcattcacatatcttcatttaatcata 181  Q
    |||||||||| || |||||||||||| ||||||| |||||||||| |||||||||| || ||| ||||||| |||||||||||||||    
T  41917981 tccaagtaaa-gatgaaatacaacaccttatgatgaacatcatatccaacacctaataagtcactcacataacttcatttaatcata 41917896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 197
Target Start/End: Original strand, 9651248 - 9651376
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatct 168  Q
    |||||| | |||||||||| |||| ||| ||  ||| ||| ||| |||| ||||| |||||||||||||| |||||||||||  ||||||||| | ||||    
T  9651248 caacaacttcatataatttctcacaatcaaaacaaaggagaaaagtacatcacatcatgataaacatcatgttcaacacctattaatcattcatacatct 9651347  T
Q  169 tcatttaatcatatcaaacaatccacaaa 197  Q
    ||||  ||||||||||||| || ||||||    
T  9651348 tcatacaatcatatcaaactattcacaaa 9651376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 13593957 - 13593872
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaa-aaatcattcacatatcttcatttaatcata 181  Q
    |||||||||| || |||||||||||| ||||||| |||||||||| ||||| |||| || ||| ||||||| |||||||||||||||    
T  13593957 tccaagtaaa-gatgaaatacaacaccttatgatgaacatcatatccaacatctaacaagtcactcacataacttcatttaatcata 13593872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 10238671 - 10238565
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaat-cattcacatatcttcatttaatcatatcaaacaatccac 194  Q
    |||||||||| ||| |||| |||||| |||||||||  |||||||||||||  ||||||| |||||||||||||||||||| |||||| ||   ||| ||    
T  10238671 tccaagtaaa-gagaaaatgcaacaccttatgataat-atcatattcaacaattaaaaattcattcacatatcttcatttagtcatataaagttatctac 10238574  T
Q  195 aaaagattt 203  Q
    |||||||||    
T  10238573 aaaagattt 10238565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 38763734 - 38763824
Alignment:
Q  98 caagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaac 187  Q
    |||||||| ||||||| |||||||| | |||||||| |||||||| || |||| | ||| | ||||||||||||||| |||| ||||||||    
T  38763734 caagtaaaggaggaaaatacaacacctaatgataaatatcatatttaagacctcacaattactcacatatcttcattcaatcgtatcaaac 38763824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 14570328 - 14570437
Alignment:
Q  127 gataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagat 226  Q
    |||||| ||||| ||||||| |||  ||||||||| | | ||| || |||||| || || | || ||||||||||||| ||||||  | |||||||||||    
T  14570328 gataaatatcattttcaacatctatcaatcattcatacacctttatgtaatcacataaagctattcacaaaagatttgtcaagtatcttgtcttaaagat 14570427  T
Q  227 tattttcgac 236  Q
    ||||||||||    
T  14570428 tattttcgac 14570437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 211
Target Start/End: Complemental strand, 19082306 - 19082193
Alignment:
Q  98 caagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaa 197  Q
    |||||||| ||| ||||| | |||  || ||||||||||||||||||||||||  |||| |||| | ||||| || ||||||||| || | || ||||||    
T  19082306 caagtaaaggagaaaatatatcacgctaagataaacatcatattcaacacctatcaatccttcatacatcttaatataatcatataaagctattcacaaa 19082207  T
Q  198 agatttgccaagta 211  Q
    | |||||| |||||    
T  19082206 atatttgcaaagta 19082193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 15014515 - 15014429
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaat-cattcacatatcttcatttaatcatat 182  Q
    |||||||||| ||| ||||||||||  |||||||||| ||||||| |||||  ||| ||| |||||||| ||||||||||| ||||||    
T  15014515 tccaagtaaa-gagaaaatacaacaacttatgataaatatcatatccaacatataacaattcattcacacatcttcatttagtcatat 15014429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 18240984 - 18240891
Alignment:
Q  90 tcacgatccaagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatat 182  Q
    |||| ||||||||||| ||||||| |||||||| || |||||||| |||  |||||||| ||  | | | ||||||||||||||| ||||||||    
T  18240984 tcaccatccaagtaaaagaggaaaatacaacaccttgtgataaacttcacgttcaacacttaccatttactcacatatcttcattcaatcatat 18240891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 9e-54; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 15 - 232
Target Start/End: Original strand, 22331676 - 22331896
Alignment:
Q  15 aatatcaccattaattaacatatatgcaagtaatcaacatcaacaatattat-tac--caacaattccatataatttttcacgatccaagtaaatgagga 111  Q
    ||||||||||| |||||| |||||||||  |||||||||| ||| |||| || ||   |||||| |||||| ||||| |||| || |||||||| ||| |    
T  22331676 aatatcaccatcaattaatatatatgcat-taatcaacataaactatatcatatagttcaacaactccatacaatttctcacaatacaagtaaaggagaa 22331774  T
Q  112 aatacaacacattatgataaacatcatattcaa-cacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagt 210  Q
     |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  22331775 gatacaacacattatgataaacatcatattcaatcacctagaaagcattcacatatcttcatataatcatatcaaactatccacaaaagatttgccaagt 22331874  T
Q  211 aattggtcttaaagattatttt 232  Q
    | ||||||||||||||||||||    
T  22331875 atttggtcttaaagattatttt 22331896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 43641731 - 43641897
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| |||||| ||||| |||| || |||||||| ||| ||||||||||||||||||||||||||||||||||||| |  ||| ||||||||||||||    
T  43641731 caacaactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatcatattcaacacatgtaaagcattcacatatctt 43641830  T
Q  170 catttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||| |||||||||||||| ||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  43641831 catataatcatatcaaactatctacaatagatttgccaagtatttggtcttaaagattattttcgac 43641897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 45618415 - 45618581
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| | |||| ||||| |||| || |||||||| ||| |||||||||||||||||||||| |||||||||||||| || ||| ||||||||||||||    
T  45618415 caacaacttcatacaatttctcacaattcaagtaaaagagaaaatacaacacattatgataaaaatcatattcaacacgtagaaagcattcacatatctt 45618514  T
Q  170 catttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||| |||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  45618515 catataatcatatcaaattatccacaaaagatttaccaagtaattggtcttaaagattattttcgac 45618581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 85 - 236
Target Start/End: Complemental strand, 24562007 - 24561856
Alignment:
Q  85 atttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatca 184  Q
    |||| |||| ||||||||||| ||| ||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||    
T  24562007 atttctcacaatccaagtaaaggagaaaatacaacaccttatgataaacatcatattcaacatctaacaatcattcacatatcttcatataatcatatca 24561908  T
Q  185 aacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||||||| ||||||||||| | ||||| |||||| |||||||||||||||||    
T  24561907 aacaatctacaaaagattttctaagtatttggtcctaaagattattttcgac 24561856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 90 - 236
Target Start/End: Original strand, 29113242 - 29113388
Alignment:
Q  90 tcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaa 189  Q
    |||| |||||| |||| ||| ||||||  ||||||||||||||||||||||||| ||||||  |||||| ||||||||||||| |||||||| ||||| |    
T  29113242 tcacaatccaaataaaggagaaaatacttcacattatgataaacatcatattcatcacctagcaatcatccacatatcttcatataatcataacaaacta 29113341  T
Q  190 tccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    | |||||||||||||||||||||||||||||||||||||||||||||    
T  29113342 ttcacaaaagatttgccaagtaattggtcttaaagattattttcgac 29113388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 84 - 236
Target Start/End: Complemental strand, 19434715 - 19434563
Alignment:
Q  84 aatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatc 183  Q
    ||||| |||| || |||||||| ||| |||||||| |||||||||||||||||||||||||||  |  ||| ||||||||||||||||| ||||||||||    
T  19434715 aatttctcacaattcaagtaaaggagaaaatacaatacattatgataaacatcatattcaacatatgtaaagcattcacatatcttcatataatcatatc 19434616  T
Q  184 aaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    |||| ||| |||| ||||||||||| || ||||||||||||||||||||||||    
T  19434615 aaactatctacaatagatttgccaattatttggtcttaaagattattttcgac 19434563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 203
Target Start/End: Original strand, 18534782 - 18534975
Alignment:
Q  12 aagaatatcaccattaattaacatatatgcaagtaatcaacatcaacaatattat-tac--caacaattccatataatttttcacgatccaagtaaatga 108  Q
    ||||||||||| || ||| ||||||||||||  |||||||||||||| |||| || ||   |||||| |||||||||||| |||| || |||||||| ||    
T  18534782 aagaatatcacaatcaatcaacatatatgcat-taatcaacatcaactatatcatatagttcaacaactccatataatttctcacaattcaagtaaagga 18534880  T
Q  109 ggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagattt 203  Q
    | ||||||||||||||||||||| ||||||||||||||| |  ||| ||||||||||||||||| ||||||||| || | || ||| ||||||||    
T  18534881 gaaaatacaacacattatgataatcatcatattcaacacatgtaaaacattcacatatcttcatataatcatataaagctattcacgaaagattt 18534975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 236
Target Start/End: Original strand, 24840855 - 24840980
Alignment:
Q  111 aaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagt 210  Q
    |||||||||||||||||||||| |||||||| || ||||| |||  || ||||||| ||||| |||| |||  |||| ||||||||||||||||||||||    
T  24840855 aaatacaacacattatgataaaaatcatattaaaaacctagaaaggatgcacatatattcatataataatagaaaactatccacaaaagatttgccaagt 24840954  T
Q  211 aattggtcttaaagattattttcgac 236  Q
    | ||||||||||||||||||||||||    
T  24840955 atttggtcttaaagattattttcgac 24840980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 70 - 182
Target Start/End: Original strand, 6093848 - 6093960
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| |||||||| ||| |||| ||||||||||| ||| ||||||  | ||||||||||||||||||||||||||||||| ||| | |||||||||||    
T  6093848 caacaactccatatactttctcacaatccaagtaaaggagaaaatacttcgcattatgataaacatcatattcaacacctaacaattactcacatatctt 6093947  T
Q  170 catttaatcatat 182  Q
    |||||||||||||    
T  6093948 catttaatcatat 6093960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 20272424 - 20272529
Alignment:
Q  132 acatcatattcaacacctaaaaat-cattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattatt 230  Q
    |||| ||||||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||| ||||||| ||| || || |||||||||||||||    
T  20272424 acattatattcaacacctaaaaattcattcacatatcttcatataatcataacaaactatccacaagagatttgtcaattatttagtcttaaagattatt 20272523  T
Q  231 ttcgac 236  Q
    ||||||    
T  20272524 ttcgac 20272529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 24276832 - 24276904
Alignment:
Q  111 aaatacaacacattatgataaacatcatattcaacacctaaaaa-tcattcacatatcttcatttaatcatat 182  Q
    |||||||||||  ||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||| ||||||    
T  24276832 aaatacaacaccctatgataaatatcatatccaacacctaaaaattcattcacacatcttcatttagtcatat 24276904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 25133127 - 25133220
Alignment:
Q  90 tcacgatccaagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatat 182  Q
    |||| ||||||||||| ||||||| |||||||| || |||||||||||| ||||||||| ||| | | | ||||| ||||||||| ||||||||    
T  25133127 tcaccatccaagtaaaggaggaaaatacaacaccttgtgataaacatcacattcaacacttaacatttactcacacatcttcattcaatcatat 25133220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 23799536 - 23799608
Alignment:
Q  131 aacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagattt 203  Q
    ||||||||||||||||||||  ||||||||| |||||  ||| |||||||||||||  |||||||||| ||||    
T  23799536 aacatcatattcaacacctagcaatcattcaaatatccccatataatcatatcaaattatccacaaaatattt 23799608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 9635743 - 9635815
Alignment:
Q  110 gaaatacaacacattatgataaacatcatattcaacacctaaaaa-tcattcacatatcttcatttaatcata 181  Q
    |||||||| ||| |||| || |||||||||| |||||||||| || ||| ||||||| |||||||||||||||    
T  9635743 gaaatacatcaccttataatgaacatcatatccaacacctaacaagtcactcacataacttcatttaatcata 9635815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 22787256 - 22787186
Alignment:
Q  113 atacaacacattatgataaacatcatattcaacacctaa-aaatcattcacatatcttcatttaatcatat 182  Q
    ||||||||  |||||||||| |||||||||||||  ||| || ||||||||| ||||||||||| ||||||    
T  22787256 atacaacatcttatgataaatatcatattcaacatataacaattcattcacacatcttcatttagtcatat 22787186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 45618738 - 45618691
Alignment:
Q  15 aatatcaccattaattaacatatatgcaagtaatcaacatcaacaatat 63  Q
    ||||||||||| ||||||||||||||| | |||||||||||||| ||||    
T  45618738 aatatcaccatcaattaacatatatgc-attaatcaacatcaactatat 45618691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 15 - 236
Target Start/End: Complemental strand, 15059 - 14836
Alignment:
Q  15 aatatcaccattaattaacatatatgcaagtaatcaacatcaacaatattat-tac--caacaattccatataatttttcacgatccaagtaaatgagga 111  Q
    ||||||||||| ||||||||||||||||  ||||| |||||||| |||| || ||   |||||| |||||||||||| |||| || |||||||| ||| |    
T  15059 aatatcaccatcaattaacatatatgcat-taatcgacatcaactatatcatatagttcaacaactccatataatttctcacaattcaagtaaaggagaa 14961  T
Q  112 aatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagta 211  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| |||| | || ||||||||| |||||||||||||||| ||||||    
T  14960 aatacaacacattatgataaacatcatattcaacacctagaaaacattgacatatcgtcatatgattatatcaaactatccacaaaagatttgtcaagta 14861  T
Q  212 attggtcttaaagattattttcgac 236  Q
     ||||||||||| ||||||||||||    
T  14860 tttggtcttaaaaattattttcgac 14836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 90 - 236
Target Start/End: Complemental strand, 8361 - 8215
Alignment:
Q  90 tcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaa 189  Q
    |||| ||||||||||| ||| ||||||||||| |||||||||| |||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |    
T  8361 tcacaatccaagtaaaggagaaaatacaacaccttatgataaatatcatattcaacacctaacaatcattcacatatattcatgtaatcatatcaaacta 8262  T
Q  190 tccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||    
T  8261 tccacaaaagatttgtcaagtaattggtcttaaagattatttccgac 8215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 2e-51; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 21108524 - 21108690
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| |||||||| ||| |||| ||||||||||| ||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||    
T  21108524 caacaactccatatactttctcacaatccaagtaaaggagaaaatacaacaccttatggtaaacatcatattcaacacctaacaatcattcacatatctt 21108623  T
Q  170 catttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||| |||||||| | ||| |||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  21108624 catataatcataacgaactatccgcaaaagatttgacaagtatttggtcttaaagattattttcgac 21108690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 24226737 - 24226570
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| |||||| ||||| |||| || |||||||| ||| || || ||||||||||||||||||||||||||||||| |  ||| ||||||||||||||    
T  24226737 caacaactccatacaatttctcacaattcaagtaaaggagaaagtaaaacacattatgataaacatcatattcaacacatgtaaagcattcacatatctt 24226638  T
Q  170 catttaatcatatcaaac-aatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||| |||||||||||||| |||| | || |||||||||||||| ||||||||||||||||||||||||    
T  24226637 catataatcatatcaaactaatctataatagatttgccaagtatttggtcttaaagattattttcgac 24226570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 14342918 - 14342752
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| ||||||  |||| |||| || ||| |||  ||| ||||||||||||||||||||||||||||||||||||| ||| ||| |  ||||||||||    
T  14342918 caacaactccataccatttctcacaattcaattaatggagaaaatacaacacattatgataaacatcatattcaacacttaacaattacccacatatctt 14342819  T
Q  170 catttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    |||||||||| ||||||| ||||||| |||||||||||| || ||||||||||||||||||||||||    
T  14342818 catttaatcacatcaaactatccacacaagatttgccaaatatttggtcttaaagattattttcgac 14342752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 236
Target Start/End: Complemental strand, 20455305 - 20455090
Alignment:
Q  15 aatatcaccattaattaacatatatgcaagtaatcaacatcaacaatattat-tac--caacaattccatataatttttcacgatccaagtaaatgagga 111  Q
    |||||||| || ||| ||||||||||||  |||||||||||||| |||| || ||   |||||| |||||  | ||| |||| || |||||||| ||| |    
T  20455305 aatatcacaatcaatcaacatatatgcat-taatcaacatcaactatatcatatagttcaacaactccattcagtttctcacaattcaagtaaaggagaa 20455207  T
Q  112 aatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagta 211  Q
    |||||||||||||||||||||||||||||||||||| || ||| |||||||||||||        ||||||||||| |||||||||||||||||||||||    
T  20455206 aatacaacacattatgataaacatcatattcaacacttagaaaacattcacatatct--------tcatatcaaactatccacaaaagatttgccaagta 20455115  T
Q  212 attggtcttaaagattattttcgac 236  Q
     ||| ||||||||||||||||||||    
T  20455114 tttgctcttaaagattattttcgac 20455090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 33627656 - 33627491
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| |||||| |||||||||  || |||||||| ||| |||||||||||| ||||||||||| |||||||||||| || |   |||||||||||||     
T  33627656 caacaactccatacaatttttcataatacaagtaaaggagaaaatacaacacactatgataaaca-catattcaacacttagagggcattcacatatctc 33627558  T
Q  170 catttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||| |||||||| ||||  |||||||||| |||||| ||||| ||| ||||||||||||||||||||    
T  33627557 catataatcataacaaattatccacaaaaaatttgctaagtatttgatcttaaagattattttcgac 33627491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 203
Target Start/End: Original strand, 11964924 - 11965098
Alignment:
Q  31 aacatatatgcaagtaatcaacatcaacaatattattac---caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatg 127  Q
    ||||||||||||  |||||||||||||| ||||||||     |||||| | |||| ||||| |||| || |||||||| ||| |||||||||||||||||    
T  11964924 aacatatatgcat-taatcaacatcaactatattatttagttcaacaacttcatacaatttctcacaattcaagtaaaggagaaaatacaacacattatg 11965022  T
Q  128 ataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagattt 203  Q
    |||||||||||||||||||| |  ||| ||||||||||||||||| ||||||||| || | || ||| ||||||||    
T  11965023 ataaacatcatattcaacacatgtaaagcattcacatatcttcatataatcatataaagctattcacgaaagattt 11965098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 23414148 - 23414257
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| |||||| | ||| ||||  |||||||||| ||| ||||||||||| |||| |||||||||||||||| ||||||| ||||||||| |||||||    
T  23414148 caacaactccatacactttctcacattccaagtaaaggagaaaatacaacaccttataataaacatcatattcagcacctaacaatcattcaaatatctt 23414247  T
Q  170 catttaatca 179  Q
     |||||||||    
T  23414248 aatttaatca 23414257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 16836549 - 16836465
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcata 181  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||| |||  ||||| ||||||| ||||||||| |||||||||||    
T  16836549 tccaagtaaa-gaggaaatacaacaccttatgatgaacatcatatccaatgcctaacaatcattaacatatctttatttaatcata 16836465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 26561046 - 26560942
Alignment:
Q  84 aatttttcacgatccaagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatat 182  Q
    ||||| |||| ||||||||||| ||||||| |||||||| || |||||||| ||| ||||||||||||  | | | ||||||||||||||| ||||||||    
T  26561046 aatttgtcaccatccaagtaaaagaggaaaatacaacaccttgtgataaacctcacattcaacacctaccatttactcacatatcttcattcaatcatat 26560947  T
Q  183 caaac 187  Q
     ||||    
T  26560946 aaaac 26560942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 23235693 - 23235608
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaa-aaatcattcacatatcttcatttaatcata 181  Q
    |||||||||| || |||||||||||| ||||||| |||||||||| ||||| |||| || ||||||||||| ||| |||||||||||    
T  23235693 tccaagtaaa-gatgaaatacaacaccttatgatgaacatcatatccaacatctaacaagtcattcacataactttatttaatcata 23235608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 19872815 - 19872900
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcata 181  Q
    |||||||||| ||| |||||  |||| |||||||||||||||||||| |||| ||| |||||||    ||||||||||||||||||    
T  19872815 tccaagtaaaggagaaaatatcacaccttatgataaacatcatattccacacttaacaatcatttctttatcttcatttaatcata 19872900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 5622687 - 5622583
Alignment:
Q  84 aatttttcacgatccaagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatat 182  Q
    ||||| |||| ||||||||||| ||||||| |||||||  || |||||||| ||| ||||||||||||  | | | ||||||||||||||| ||||||||    
T  5622687 aatttgtcaccatccaagtaaaagaggaaaatacaacatcttgtgataaacctcacattcaacacctaccatttactcacatatcttcattcaatcatat 5622588  T
Q  183 caaac 187  Q
     ||||    
T  5622587 aaaac 5622583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 3845297 - 3845131
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| |||||| ||||| |||| ||||||||||| ||| ||||||| ||||||| ||||||||||||||||||  |||  |||||||| |||||||||    
T  3845297 caacaactccatacaatttctcacaatccaagtaaaggagaaaatacatcacattaggataaacatcatattcaaagccttgaaatcatttacatatctt 3845198  T
Q  170 catttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
     || |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  3845197 tatataatcatatcaaactatccacaaaagatttgccaagtatttggtcttacagattattttcgac 3845131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 25756947 - 25757137
Alignment:
Q  15 aatatcaccattaattaacatatatgcaagtaatcaacatcaacaatattat-tac--caacaattccatataatttttcacgatccaagtaaatgagga 111  Q
    ||||||||||| ||||||||||||||||  |||||||||||||| |||| || ||   |||||| |||||| ||||| |||| |  |||||||| ||| |    
T  25756947 aatatcaccatcaattaacatatatgcat-taatcaacatcaactatatcatatagttcaacaactccatacaatttctcacaagtcaagtaaaggagaa 25757045  T
Q  112 aatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagattt 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||   |||||||||| ||||    
T  25757046 aatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatataatcatataaagatatccacaaaatattt 25757137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 19332768 - 19332601
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| |||||||| ||  |||| |||||||||||  || ||||||  ||||||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  19332768 caacaactccatatacttcctcacaatccaagtaaagaagaaaatacttcacattatgataaacatcatattcatcacctagaaatcatccacatatctt 19332669  T
Q  170 catttaatcatatcaaacaatccac-aaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||| |||||||||||||| |||||| ||||||||||| ||| ||||||||||||| ||||||||||||    
T  19332668 catataatcatatcaaactatccacaaaaagatttgctaagcaattggtcttaaaaattattttcgac 19332601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 25294927 - 25295117
Alignment:
Q  15 aatatcaccattaattaacatatatgcaagtaatcaacatcaacaatattat-tac--caacaattccatataatttttcacgatccaagtaaatgagga 111  Q
    ||||||||||| ||||||||||||||||  |||||||||||||| |||| || ||   |||||| |||||| ||||| |||| |  |||||||| ||| |    
T  25294927 aatatcaccatcaattaacatatatgcat-taatcaacatcaactatatcatatagttcaacaactccatacaatttctcacaagtcaagtaaaggagaa 25295025  T
Q  112 aatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagattt 203  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||   |||||||||| ||||    
T  25295026 aatacaacacattatgataaacatcatattcaacacttaaaaatcattcacatatcttcatataatcatataaagatatccacaaaatattt 25295117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 113 - 236
Target Start/End: Original strand, 11543571 - 11543694
Alignment:
Q  113 atacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaa 212  Q
    ||||||||  ||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||| ||||| |||| ||||||||||| ||||||     
T  11543571 atacaacaatttatgataaacatcatattcaacacctagcaatcattcacataccttcatttaatcataacaaactatcctcaaaagatttgacaagtat 11543670  T
Q  213 ttggtcttaaagattattttcgac 236  Q
    ||||||||||||||||||||||||    
T  11543671 ttggtcttaaagattattttcgac 11543694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 98 - 236
Target Start/End: Complemental strand, 20177107 - 20176970
Alignment:
Q  98 caagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaa 197  Q
    |||||||| ||| ||||||||||| |||| |||||||||| ||||||||| ||  |||||||||||||||||||| |||||||||||||| |||||||||    
T  20177107 caagtaaaggagaaaatacaacaccttataataaacatcacattcaacacatagtaatcattcacatatcttcatataatcatatcaaactatccacaaa 20177008  T
Q  198 agatttgccaagtaattggtcttaaagattattttcgac 236  Q
    |||||| ||||||| ||||||||  ||||||||||||||    
T  20177007 agattttccaagtatttggtctt-tagattattttcgac 20176970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 98 - 236
Target Start/End: Complemental strand, 20221834 - 20221697
Alignment:
Q  98 caagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaa 197  Q
    |||||||| ||| ||||||||||| |||| |||||||||| ||||||||| ||  |||||||||||||||||||| |||||||||||||| |||||||||    
T  20221834 caagtaaaggagaaaatacaacaccttataataaacatcacattcaacacatagtaatcattcacatatcttcatataatcatatcaaactatccacaaa 20221735  T
Q  198 agatttgccaagtaattggtcttaaagattattttcgac 236  Q
    |||||| ||||||| ||||||||  ||||||||||||||    
T  20221734 agattttccaagtatttggtctt-tagattattttcgac 20221697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 113 - 236
Target Start/End: Original strand, 22312726 - 22312849
Alignment:
Q  113 atacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaa 212  Q
    ||||||||  ||||||||||||||||||||||||||||  || |||||||||| |||||||| |||||| ||||| || ||||||||||||||||||||     
T  22312726 atacaacaatttatgataaacatcatattcaacacctagcaaccattcacataccttcatttcatcataacaaactattcacaaaagatttgccaagtat 22312825  T
Q  213 ttggtcttaaagattattttcgac 236  Q
    || |||||||| ||||||||||||    
T  22312826 ttcgtcttaaaaattattttcgac 22312849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 18119139 - 18119041
Alignment:
Q  124 tatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaa 222  Q
    |||||||||||||||||||||||||||  || ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  18119139 tatgataaacatcatattcaacacctagcaaacattcacatatcttcatataatcatatcaaactatccacaaaagatttgccaagtatttgatcttaa 18119041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 203
Target Start/End: Complemental strand, 45560369 - 45560236
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| |||||| || || |||| ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||    
T  45560369 caacaactccatacaacttctcacaatccaagtaaaggagaaaatacaacactttatgataaacatcatattcaacacctaacaatcgttcacatatctt 45560270  T
Q  170 catttaatcatatcaaacaatccacaaaagattt 203  Q
    ||| ||||||||| |    |||||||||||||||    
T  45560269 catataatcatataatgatatccacaaaagattt 45560236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 17500969 - 17501074
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccaca 195  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||| || | |||||||    
T  17500969 tccaagtaaa-gatgaaatacaacaccttatgataaacatcatattcaacacctaacaatcattcacataatttcatttaatcatataaagctatccaca 17501067  T
Q  196 aaagatt 202  Q
    |||||||    
T  17501068 aaagatt 17501074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 22498514 - 22498407
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccaca 195  Q
    |||||||| | ||| ||||||||||| || |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| || | || |||     
T  22498514 tccaagtataggagaaaatacaacaccttgtgataaacatcatattcaacacctatcaatcattcacatatcttcatttaatcatataaagctattcacg 22498415  T
Q  196 aaagattt 203  Q
    ||||||||    
T  22498414 aaagattt 22498407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 22886807 - 22886914
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccaca 195  Q
    |||| ||||| ||| | ||||||||| ||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| |||||| || | || ||||    
T  22886807 tccatgtaaaggagaagatacaacaccttatgataaacatcatattcaacacttaacaatcattcacatagcttcatttagtcatataaagctattcaca 22886906  T
Q  196 aaagattt 203  Q
    ||||||||    
T  22886907 aaagattt 22886914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 236
Target Start/End: Original strand, 24906839 - 24906977
Alignment:
Q  98 caagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaa 197  Q
    |||||||| |||| |||||||| || ||||||||||||||| |||| ||| || | ||||||||||||||||||| ||||||||| |  | || ||||||    
T  24906839 caagtaaaggagggaatacaacgcactatgataaacatcatgttcatcacatagagatcattcacatatcttcatataatcatataaggctattcacaaa 24906938  T
Q  198 agatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||||||   | ||||| ||||||| ||||||||||||||    
T  24906939 agatttataaggtaatcggtcttagagattattttcgac 24906977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 18042743 - 18042671
Alignment:
Q  111 aaatacaacacattatgataaacatcatattcaacacctaa-aaatcattcacatatcttcatttaatcatat 182  Q
    ||||||||||| |||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||    
T  18042743 aaatacaacaccttatgataaatatcatattcaacacctaacaattcattcacatatcttcatttaatcatat 18042671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 203
Target Start/End: Original strand, 24238581 - 24238742
Alignment:
Q  45 taatcaacatcaacaatat--tattac-caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatatt 141  Q
    |||||||||||||| ||||  ||| || |||||| | |||||| ||| |||  |||||||||||  || ||||||||||| ||| ||||||| || ||||    
T  24238581 taatcaacatcaactatataatataactcaacaacttcatatactttctcataatccaagtaaagaagtaaatacaacacgttacgataaacctcgtatt 24238680  T
Q  142 caacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagattt 203  Q
    ||||||| || |||||||||| ||||||||||||||||||| || | || ||| ||||||||    
T  24238681 caacaccgaagaatcattcacttatcttcatttaatcatataaatctattcacgaaagattt 24238742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 7469206 - 7469311
Alignment:
Q  98 caagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaa 196  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||||| ||||   ||| | ||||||||||||||| |||||||| || | || |||||    
T  7469206 caagtaaaggaggaaaatacaacaccttatgataaacatcatattcaagacctcgcaattactcacatatcttcattcaatcatataaagctattcacaa 7469305  T
Q  197 aagatt 202  Q
    ||||||    
T  7469306 aagatt 7469311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 33171211 - 33171295
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaa-aaatcattcacatatcttcatttaatcat 180  Q
    |||||||||| ||| |||| |||||| |||||||||| |||||||||||||||||| || ||||||||||||||||||||| ||||    
T  33171211 tccaagtaaa-gagaaaatgcaacaccttatgataaatatcatattcaacacctaacaattcattcacatatcttcatttagtcat 33171295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 202
Target Start/End: Complemental strand, 38636902 - 38636798
Alignment:
Q  99 aagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaa 197  Q
    ||||||| ||||||| |||||||| |||||||||| ||||||||||| |||| | ||| | ||||||||||||||| |||||||| |||| |  ||||||    
T  38636902 aagtaaaggaggaaaatacaacaccttatgataaatatcatattcaatacctcacaattactcacatatcttcattcaatcatataaaactaatcacaaa 38636803  T
Q  198 agatt 202  Q
    |||||    
T  38636802 agatt 38636798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 16001044 - 16001127
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatca 179  Q
    ||||||| || ||| |||||||||||  |||||||||||||||||||||  ||||| ||  ||||||||||||||| |||||||    
T  16001044 tccaagtgaaggagaaaatacaacaccctatgataaacatcatattcaatgcctaacaactattcacatatcttcacttaatca 16001127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 173
Target Start/End: Original strand, 25609175 - 25609254
Alignment:
Q  95 atccaagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatt 173  Q
    ||||||||||| ||||||| |||||| | ||||||||||||||||||||||||| ||| ||| |  ||||||||||||||    
T  25609175 atccaagtaaaggaggaaaatacaacgccttatgataaacatcatattcaacacttaacaattacccacatatcttcatt 25609254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 37654881 - 37654832
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaaca 146  Q
    |||||||||| ||| ||||||||||| |||||||||| |||||||||||||    
T  37654881 tccaagtaaa-gagaaaatacaacaccttatgataaatatcatattcaaca 37654832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 233
Target Start/End: Original strand, 9769 - 9991
Alignment:
Q  15 aatatcaccattaattaacatatatgcaagtaatcaacatcaacaatattat-tac--caacaattccatataatttt-tcacgatccaagtaaatgagg 110  Q
    ||||||||||| ||||| ||||||||||  |||||||||||||| |||| || ||   |||||| |||||| |||||| |||| || |||||||| |||     
T  9769 aatatcaccatcaattatcatatatgcat-taatcaacatcaactatatcatatagttcaacaactccatacaattttctcacaattcaagtaaaagaga 9867  T
Q  111 aaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacata-tcttcatttaatcatatcaaacaatccacaaaagatttgccaag 209  Q
    |||||||||| |||||| |||||||||||||||||||||| |||  ||||||||| ||||||| |||||||||||||| ||| |||||||||| ||||||    
T  9868 aaatacaacatattatggtaaacatcatattcaacacctagaaagaattcacataatcttcatataatcatatcaaactatcaacaaaagattagccaag 9967  T
Q  210 taattggtcttaaagattattttc 233  Q
    || |||||||||||||||||||||    
T  9968 tatttggtcttaaagattattttc 9991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 89; Significance: 5e-43; HSPs: 5)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 96 - 236
Target Start/End: Complemental strand, 35934 - 35795
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccaca 195  Q
    |||||||||| ||| ||||||| |||| ||||||||||||||||||||||||| |  |||||||||||||||||||| |||||||||||||| |||||||    
T  35934 tccaagtaaa-gagaaaatacaccacactatgataaacatcatattcaacacccagcaatcattcacatatcttcatataatcatatcaaactatccaca 35836  T
Q  196 aaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    |||||||| ||||||| ||||| ||||||||||||||||||    
T  35835 aaagattttccaagtatttggttttaaagattattttcgac 35795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 168
Target Start/End: Complemental strand, 1415 - 1317
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatct 168  Q
    |||||| |||||| ||||| |||| || |||||||| ||| ||||||||||||||||||||||||||||||||||||| |  ||| |||||||||||||    
T  1415 caacaactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatcatattcaacacatgtaaagcattcacatatct 1317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 168
Target Start/End: Complemental strand, 5795 - 5697
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatct 168  Q
    |||||| |||||| ||||| |||| || |||||||| ||| ||||||||||||||||||||||||||||||||||||| |  ||| |||||||||||||    
T  5795 caacaactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatcatattcaacacatgtaaagcattcacatatct 5697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 4435 - 4362
Alignment:
Q  163 atatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    |||||||||| |||||||||||||| ||| |||| |||||||||||||| || |||||||||||||||||||||    
T  4435 atatcttcatataatcatatcaaactatctacaatagatttgccaagtatttcgtcttaaagattattttcgac 4362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 52 - 4
Alignment:
Q  163 atatcttcatttaatcatatcaaacaatccacaaaagatttgccaagta 211  Q
    |||||||||| |||||||||||||| ||| |||| ||||||||||||||    
T  52 atatcttcatataatcatatcaaactatctacaatagatttgccaagta 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 5e-43; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 8603651 - 8603799
Alignment:
Q  85 atttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatca 184  Q
    |||| |||| ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||    
T  8603651 atttctcacaatccaagtaaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaatcattcacatatcttcacataatcatatca 8603750  T
Q  185 aacaatccac-aaaagatttgccaagtaattggtcttaaagattatttt 232  Q
    ||| |||||| ||||||||||| ||| |||||| |||||| ||||||||    
T  8603751 aactatccacaaaaagatttgcaaagcaattggccttaaaaattatttt 8603799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 229
Target Start/End: Complemental strand, 37917620 - 37917470
Alignment:
Q  79 catataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatc 178  Q
    ||||| |||| |||| |||||| |||| ||| ||||||  |||| |||||||||||||||||||||||| ||  ||||||||| |||| | ||| |||||    
T  37917620 catatgatttctcaccatccaaataaaggagaaaatactccacactatgataaacatcatattcaacacatatcaatcattcaaatatgtccatataatc 37917521  T
Q  179 atatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattat 229  Q
    ||| | ||| ||||||||||||||||||||||| ||||||| |||||||||    
T  37917520 ataaccaactatccacaaaagatttgccaagtatttggtctgaaagattat 37917470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 25105226 - 25105062
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatctt 169  Q
    |||||| |||||| |||||  ||| || |||||||| ||| |||||||||||  |  |||||||||| ||||| |||| || | | |||||||||||||     
T  25105226 caacaactccatacaatttcccacaattcaagtaaaggagaaaatacaacaccgt--gataaacatcgtattcgacacttagagagcattcacatatctc 25105129  T
Q  170 catttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||| |||||||| ||||| ||||||||||||||||||||||| |||||||||| |||| ||||||||    
T  25105128 catataatcataacaaactatccacaaaagatttgccaagtatttggtcttaaggattcttttcgac 25105062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 95 - 202
Target Start/End: Complemental strand, 38376938 - 38376831
Alignment:
Q  95 atccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccac 194  Q
    ||||||||||| ||| ||||| ||||| |||||||||||||||||  |||||||||| |||||||||||||||||||| |||| ||||||||| || |||    
T  38376938 atccaagtaaaggagaaaatataacaccttatgataaacatcatacacaacacctaacaatcattcacatatcttcatataatgatatcaaactattcac 38376839  T
Q  195 aaaagatt 202  Q
    ||||||||    
T  38376838 aaaagatt 38376831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 17759593 - 17759427
Alignment:
Q  71 aacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaaca-tcatattcaacacctaaaaatcattcacatatctt 169  Q
    ||||| |||||||| ||| |||| |||||| |||| ||| ||||||||||||  |||||||| | |  |||||||||| || | | |||||| ||||||     
T  17759593 aacaactccatatactttctcacaatccaattaaaagagaaaatacaacacaccatgataaaaaattgtattcaacacttagagagcattcagatatctc 17759494  T
Q  170 catttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||| |||||||| ||||| || |||||||||||| ||||||| ||||||||||||||||||||||||    
T  17759493 catataatcataacaaactatgcacaaaagattttccaagtatttggtcttaaagattattttcgac 17759427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 19060913 - 19060747
Alignment:
Q  71 aacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaaca-tcatattcaacacctaaaaatcattcacatatctt 169  Q
    ||||| |||||||| ||| |||| |||||| |||| ||| ||||||||||||  |||||||| | |  |||||||||| || | | |||||| ||||||     
T  19060913 aacaactccatatactttctcacaatccaattaaaagagaaaatacaacacaccatgataaaaaattgtattcaacacttagagagcattcagatatctc 19060814  T
Q  170 catttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||| |||||||| ||||| || |||||||||||| ||||||| ||||||||||||||||||||||||    
T  19060813 catataatcataacaaactatgcacaaaagattttccaagtatttggtcttaaagattattttcgac 19060747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 229
Target Start/End: Complemental strand, 40040369 - 40040219
Alignment:
Q  79 catataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatc 178  Q
    ||||| |||| |||| |||||| |||| ||| ||||||  |||| ||||| |||||||||||||||||||||  ||||||||| |||||| ||| |||||    
T  40040369 catatgatttatcaccatccaaataaaggagaaaatacttcacactatgagaaacatcatattcaacacctatcaatcattcaaatatctccatataatc 40040270  T
Q  179 atatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattat 229  Q
    ||| | ||| |||||||||| |||||||||||| ||| ||||||| |||||    
T  40040269 ataaccaactatccacaaaatatttgccaagtatttgatcttaaatattat 40040219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 14181225 - 14181133
Alignment:
Q  111 aaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagattt 203  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||| || | || ||||||||||||    
T  14181225 aaatacaacaccttatgataaacatcatattcaacacttaacaatcattcacatatcttcattcaatcatataaagctattcacaaaagattt 14181133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 11401533 - 11401725
Alignment:
Q  15 aatatcaccattaattaacatatatgcaagtaatcaacatcaacaatattat-tac--caacaattccatataatttttcacgatccaagtaaatgagga 111  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||  ||| || ||   |||||| | |||| ||||| |||| || |||||||| ||| |    
T  11401533 aatatcaccatcaattaacatatatgcat-taatcaacatcaactttatcatatagttcaacaacttcatacaatttctcacaattcaagtaaaggagaa 11401631  T
Q  112 aatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgc 205  Q
    || ||| |||||||||||||||||||||||||||| |||  ||||||||| | | ||| || ||||||||| || | || ||||||||||||||    
T  11401632 aacacagcacattatgataaacatcatattcaacaactagcaatcattcatacaactttatgtaatcatataaagctattcacaaaagatttgc 11401725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 147
Target Start/End: Complemental strand, 5229265 - 5229188
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacac 147  Q
    |||||| ||||||  |||| |||| || |||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  5229265 caacaactccatacgatttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatcatattcaacac 5229188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 17392442 - 17392523
Alignment:
Q  155 tcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||||||||| |||||||| || | ||||||||| |||| |||||||||| ||||||| ||| ||||||||||||||||||||    
T  17392442 tcattcacacatcttcatatatttatatcaaactatccgcaaaagattttccaagtatttgatcttaaagattattttcgac 17392523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 14969895 - 14969956
Alignment:
Q  124 tatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaa 185  Q
    |||||||||||||||||||||||||||  ||||||||||| ||||||||  |||||||||||    
T  14969895 tatgataaacatcatattcaacacctatcaatcattcacacatcttcatacaatcatatcaa 14969956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 179
Target Start/End: Complemental strand, 17319818 - 17319733
Alignment:
Q  95 atccaagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatca 179  Q
    ||||| ||||| ||||||| |||||||| || |||||||||||| ||||||||| ||| ||| | |||||||||||||||||||||    
T  17319818 atccacgtaaaggaggaaaatacaacaccttctgataaacatcaaattcaacacttaacaattactcacatatcttcatttaatca 17319733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 202
Target Start/End: Complemental strand, 43428802 - 43428670
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatct 168  Q
    |||||| |||||| ||||| |||  || |||||||  ||||||| ||||| || |||||||||||||||||||||| |||  | | | | ||||||||||    
T  43428802 caacaactccatacaatttctcataatacaagtaatagaggaaaatacaataccttatgataaacatcatattcaagaccccacatt-actcacatatct 43428704  T
Q  169 tcatttaatcatatcaaacaatccacaaaagatt 202  Q
    ||||| |||||||| ||||||| |||||||||||    
T  43428703 tcattaaatcatataaaacaattcacaaaagatt 43428670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 12918156 - 12918084
Alignment:
Q  131 aacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagattt 203  Q
    ||||||||||||||||||||  ||||||||| |||||| ||| ||||||||||| |  |||||||||||||||    
T  12918156 aacatcatattcaacacctagcaatcattcaaatatctccatataatcatatcatattatccacaaaagattt 12918084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 21167974 - 21167870
Alignment:
Q  84 aatttttcacgatccaagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatat 182  Q
    ||||| |||| ||||||||||| ||||||| |||||||  || |||||||| ||| ||||||||||||  | | | ||||||||||||||| ||||||||    
T  21167974 aatttgtcaccatccaagtaaaagaggaaaatacaacatcttgtgataaacctcacattcaacacctaccatttactcacatatcttcattcaatcatat 21167875  T
Q  183 caaac 187  Q
     ||||    
T  21167874 aaaac 21167870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 45804170 - 45804098
Alignment:
Q  131 aacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagattt 203  Q
    ||||||||||||| ||||||  ||||||||| |||||| ||| ||||||||||||   |||||||||||||||    
T  45804170 aacatcatattcatcacctagcaatcattcaaatatctccatataatcatatcaatttatccacaaaagattt 45804098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 33370098 - 33370012
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaat-cattcacatatcttcatttaatcatat 182  Q
    |||||||||| ||| ||||||||||| |||||||||| ||||||| |||||  ||| ||| |||||||| ||||||||||| ||||||    
T  33370098 tccaagtaaa-gagaaaatacaacaccttatgataaatatcatatccaacatataacaatccattcacacatcttcatttagtcatat 33370012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 11516730 - 11516638
Alignment:
Q  90 tcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatat 182  Q
    |||| |||||||||||  || ||||||| || |||| |||||| ||||| |||||||||||  ||| ||||| | ||||| || |||||||||    
T  11516730 tcacaatccaagtaaagaagaaaatacatcatattaagataaatatcattttcaacacctagcaattattcatacatctttatgtaatcatat 11516638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 111 - 236
Target Start/End: Complemental strand, 5234 - 5111
Alignment:
Q  111 aaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagt 210  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||  | ||||| |||||||||||||||| |||||    
T  5234 aaatacaacacattatgataaacatcttattcaacacctagaaatcattcacatatcttcatataatc--aacaaactatccacaaaagatttgtcaagt 5137  T
Q  211 aattggtcttaaagattattttcgac 236  Q
    | ||||||||||||||||||||||||    
T  5136 atttggtcttaaagattattttcgac 5111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 14065 - 13951
Alignment:
Q  122 attatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaattggtctta 221  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||||| |||||||| ||||| ||||||||||||||||| ||||| |||||||||    
T  14065 attatgataaacatcatattcaacacctagcaatcatccacatatcttcatataatcataacaaactatccacaaaagatttgctaagtatttggtctta 13966  T
Q  222 aagattattttcgac 236  Q
    |||||||||||||||    
T  13965 aagattattttcgac 13951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 11617 - 11750
Alignment:
Q  90 tcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaa 189  Q
    |||| ||||||||||| ||| ||||| ||||| |||||||||||||||||||||||||| |||||| ||| |||||||||||| |||||||||||||| |    
T  11617 tcacaatccaagtaaaggagaaaataaaacaccttatgataaacatcatattcaacacccaaaaataattgacatatcttcatataatcatatcaaacta 11716  T
Q  190 tcc-acaaaagatttgccaagtaattggtcttaa 222  Q
    ||| | ||||||||||||||||||||||||||||    
T  11717 tccaaaaaaagatttgccaagtaattggtcttaa 11750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 111 - 233
Target Start/End: Complemental strand, 255508 - 255385
Alignment:
Q  111 aaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagt 210  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||| ||||||||||||||||||| ||    
T  255508 aaatacaccacagtatgataaacatcatattcaacacctagaaatcattcacatatcttcatatattcatatcaaactatccacaaaagatttgccatgt 255409  T
Q  211 aattggtc-ttaaagattattttc 233  Q
    | ||| || |||||||||||||||    
T  255408 atttgatctttaaagattattttc 255385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 2247 - 2119
Alignment:
Q  79 catataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatc 178  Q
    ||||| |||| |||| ||||||||||| ||| ||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||| || ||    
T  2247 catattatttctcacaatccaagtaaaggagaaaatacaacaccttatgataa-catcatattcaacacctaacaatcattcacatatcttcatatattc 2149  T
Q  179 atatcaaacaatccacaaaagatttgccaa 208  Q
    ||||||||| ||||||||||||||| ||||    
T  2148 atatcaaactatccacaaaagattttccaa 2119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1278 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold1278
Description:

Target: scaffold1278; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 236
Target Start/End: Original strand, 500 - 638
Alignment:
Q  98 caagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaa 197  Q
    |||||||| ||| ||| |||||| |||||||||| |||||||||| ||| ||| ||| |||| | | |||||||| |||||||||||||| |||||||||    
T  500 caagtaaaggagaaaacacaacatattatgataagcatcatattccacaactagaaaccattaatacatcttcatataatcatatcaaactatccacaaa 599  T
Q  198 agatttgccaagtaattggtcttaaagattattttcgac 236  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  600 agatttgccaagtagttggtcttaaagatcattttcgac 638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1957 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold1957
Description:

Target: scaffold1957; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 1013 - 900
Alignment:
Q  123 ttatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaa 222  Q
    ||||||||||||| ||||||||||||||| ||||||   |||||||||||||||||||| ||||| || ||||||||||||||||| || ||||||||||    
T  1013 ttatgataaacattatattcaacacctaacaatcatctgcatatcttcatttaatcataacaaactattcacaaaagatttgccaaatatttggtcttaa 914  T
Q  223 agattattttcgac 236  Q
    ||||||||||||||    
T  913 agattattttcgac 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 4890 - 4982
Alignment:
Q  90 tcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatat 182  Q
    |||| ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4890 tcacaatccaagtaaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaatcattcacatatcttcatttaatcatat 4982  T

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Target: scaffold0047 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 90 - 236
Target Start/End: Original strand, 76010 - 76154
Alignment:
Q  90 tcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaa 189  Q
    |||| |||||| |||| ||  ||||||  ||||||||||||||||||||||||| ||||||| ||||||  ||||  ||| || |||||| | ||||| |    
T  76010 tcacaatccaaataaaggataaaatacttcacattatgataaacatcatattcatcacctaacaatcatcgacat--ctttatataatcaaaacaaacta 76107  T
Q  190 tccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  76108 tccacaaaagatttgccaagtaattggtcttaaagattattttcgac 76154  T

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Target: scaffold0174 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 228
Target Start/End: Complemental strand, 21198 - 21081
Alignment:
Q  111 aaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagt 210  Q
    ||||||| |||| ||||||||| ||||||||||||||||||||||||  |||||||||| || |||||||| | ||| ||||||||| ||||||||||||    
T  21198 aaatacatcacagtatgataaaaatcatattcaacacctaaaaatcaaccacatatctttatataatcataaccaactatccacaaatgatttgccaagt 21099  T
Q  211 aattggtcttaaagatta 228  Q
    | ||||||||||||||||    
T  21098 atttggtcttaaagatta 21081  T

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Target: scaffold0153 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 811 - 903
Alignment:
Q  90 tcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatat 182  Q
    |||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |  ||| |||||||||||| ||||||| ||||||    
T  811 tcacaatccaagtaaaggagaaaatacaacacattatgataaacatcatattcaacacatgtaaagcattcacatatcctcatttagtcatat 903  T

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Target: scaffold0452 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 233
Target Start/End: Complemental strand, 8634 - 8529
Alignment:
Q  128 ataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagatt 227  Q
    ||||||||| || ||||||| || | | |||||||||||||  || |||||||| ||||| |||||||||| |||||||||||| |||||||||||||||    
T  8634 ataaacatcgtaatcaacacttagagagcattcacatatctctatataatcataacaaactatccacaaaatatttgccaagtatttggtcttaaagatt 8535  T
Q  228 attttc 233  Q
    ||||||    
T  8534 attttc 8529  T

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Target: scaffold0088 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 44823 - 44739
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcat 180  Q
    |||||||| | ||| ||||||||||| |||| |||||||||||||||||||||||  ||||||||| | ||||||||||||||||    
T  44823 tccaagtagaggagaaaatacaacaccttataataaacatcatattcaacacctatcaatcattcatagatcttcatttaatcat 44739  T

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Target: scaffold0028 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 236
Target Start/End: Complemental strand, 39233 - 39123
Alignment:
Q  126 tgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaaga 225  Q
    ||||||||||||| |||||||||||  ||||||||| | ||||||||  ||||||||||||| || || ||||||||| | | ||| | |||||||||||    
T  39233 tgataaacatcatgttcaacacctattaatcattcatacatcttcatacaatcatatcaaactattcataaaagattttcaaggtattcggtcttaaaga 39134  T
Q  226 ttattttcgac 236  Q
    | |||||||||    
T  39133 tcattttcgac 39123  T

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Target: scaffold1204 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 168
Target Start/End: Complemental strand, 1419 - 1276
Alignment:
Q  27 aattaacatatatgcaagtaatcaacatcaacaatattat-tac--caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacat 123  Q
    ||||||||||||||||| || ||||||||||| |||| || ||   |||||| |||||||| ||| |||| ||||||||||| ||| ||||||||||||     
T  1419 aattaacatatatgcaa-tattcaacatcaactatatcatatagttcaacaactccatatactttctcacaatccaagtaaaggagaaaatacaacacac 1321  T
Q  124 tatgataaacatcatattcaacacctaaaaatcattcacatatct 168  Q
     |||||||||||| |||||||||| || | | |||||| ||||||    
T  1320 catgataaacatcgtattcaacacttagagagcattcatatatct 1276  T

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Target: scaffold1204; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 1275 - 1228
Alignment:
Q  189 atccacaaaagatttgccaagtaattggtcttaaagattattttcgac 236  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  1275 atccacaaaagatttgccaagtatttgatcttaaagattattttcgac 1228  T

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Target: scaffold0357 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 6682 - 6787
Alignment:
Q  98 caagtaaatgaggaaa-tacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaa 196  Q
    |||||||| ||||||| |||||||| |||||||||| ||||||||||| |||| | ||| | ||||||||||||||| |||||||| |||| ||  ||||    
T  6682 caagtaaaagaggaaaatacaacaccttatgataaatatcatattcaagacctcacaattactcacatatcttcattcaatcatataaaactattgacaa 6781  T
Q  197 aagatt 202  Q
    ||||||    
T  6782 aagatt 6787  T

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Target: scaffold0049 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 182
Target Start/End: Complemental strand, 34703 - 34591
Alignment:
Q  70 caacaattccatataatttttcacgatccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaa-aaatcattcacatatct 168  Q
    |||||| |||||| | ||| ||||  |||||||||  ||| ||||||||||| ||||||||||| ||||||||||||||||| || ||||||  ||||||    
T  34703 caacaactccatacactttctcacattccaagtaag-gagaaaatacaacaccttatgataaacttcatattcaacacctaacaattcattcgtatatct 34605  T
Q  169 tcatttaatcatat 182  Q
    ||||||||||||||    
T  34604 tcatttaatcatat 34591  T

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Target: scaffold0561 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 4049 - 3963
Alignment:
Q  96 tccaagtaaatgaggaaatacaacacattatgataaacatcatattcaacacctaa-aaatcattcacatatcttcatttaatcatat 182  Q
    |||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||| || ||| ||| ||||||||||||||| ||||    
T  4049 tccaagtaaa-gaggaaataccacaccttatgatgaacatcatattcaacacctaacaagtcactcaaatatcttcatttaataatat 3963  T

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Target: scaffold0258 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 9120 - 9224
Alignment:
Q  133 catcatattcaacacctaa-aaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattt 231  Q
    ||||||||| ||||||||| |||||||| ||| |||||||| ||||| |||||| | || |||||||||||||| ||||| | ||| |||||||| ||||    
T  9120 catcatattaaacacctaacaaatcatttacacatcttcatataatcgtatcaagctatacacaaaagatttgcaaagtactcggttttaaagatcattt 9219  T
Q  232 tcgac 236  Q
     ||||    
T  9220 ccgac 9224  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 247048 - 246939
Alignment:
Q  127 gataaacatcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagat 226  Q
    |||||| ||||| ||||||| |||  ||||||||| | | ||| || |||||| || || | || ||||||||||||| ||||||  | |||||||||||    
T  247048 gataaatatcattttcaacatctatcaatcattcatacacctttatgtaatcacataaagctattcacaaaagatttgtcaagtatcttgtcttaaagat 246949  T
Q  227 tattttcgac 236  Q
    ||||||||||    
T  246948 tattttcgac 246939  T

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Target: scaffold0468 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 236
Target Start/End: Complemental strand, 12198 - 12096
Alignment:
Q  134 atcatattcaacacctaaaaatcattcacatatcttcatttaatcatatcaaacaatccacaaaagatttgccaagtaattggtcttaaagattattttc 233  Q
    ||||||||||  |||||  |||||||||||||| |||||||| ||||||||| | || |||||  ||||| | ||| | ||||||  ||||||| |||||    
T  12198 atcatattcattacctagcaatcattcacatatattcatttattcatatcaatctatgcacaagggatttacaaagcatttggtccaaaagattgttttc 12099  T
Q  234 gac 236  Q
    |||    
T  12098 gac 12096  T

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Target: scaffold0193 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 3641 - 3703
Alignment:
Q  111 aaatacaacacattatgataaacatcatattcaacacctaaaaatcattcacatatcttcatt 173  Q
    ||||||||||| |||||||||| ||||||| |||||  ||| | ||||||||| |||||||||    
T  3641 aaatacaacaccttatgataaatatcatatccaacatataacattcattcacacatcttcatt 3703  T

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Target: scaffold0165 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 20996 - 21054
Alignment:
Q  123 ttatgataaacatcatattcaacacctaaaaa-tcattcacatatcttcatttaatcat 180  Q
    ||||||| |||||||||| |||||| |||||| ||| ||||||| ||||||||||||||    
T  20996 ttatgatgaacatcatatccaacacataaaaagtcactcacataacttcatttaatcat 21054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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