View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18493_low_18 (Length: 236)
Name: NF18493_low_18
Description: NF18493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18493_low_18 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 6350304 - 6350071
Alignment:
| Q |
1 |
acatcttatagaaagcttaccgcgaccacaaagttgtttggtttgggggatttgttatggtttcaagccattttcacatagagaaaattcttcaatttgt |
100 |
Q |
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| T |
6350304 |
acatcttatagaaagcttaccgcgaccacaaagttgtttggtttgggtgatttgatatggtttcaagctattttcacatagagaaaattcttcaatttgt |
6350205 |
T |
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| Q |
101 |
tgcaaagatcaaacaagcacaaactcacccaaagactcacaaaattactcagggacactaaaaactttgtatgactaattatcatcacataccaaacctt |
200 |
Q |
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| T |
6350204 |
tgcaaagatcaaacaagcacaaactcacccaaagactcacaaaattactcagggacactaaaaactttgtatgactaattatcatcacataccaaacctt |
6350105 |
T |
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| Q |
201 |
atgtcgacgtgtaaagaaagagagaaattaaatcac |
236 |
Q |
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| T |
6350104 |
atgtcgacgtggaaagaaa--gagaaattaaatcac |
6350071 |
T |
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