View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18494_high_17 (Length: 313)

Name: NF18494_high_17
Description: NF18494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18494_high_17
NF18494_high_17
[»] scaffold0576 (1 HSPs)
scaffold0576 (133-254)||(9498-9619)
[»] chr6 (32 HSPs)
chr6 (133-254)||(15364727-15364848)
chr6 (133-258)||(15328553-15328678)
chr6 (137-258)||(25924750-25924871)
chr6 (137-258)||(32784802-32784923)
chr6 (137-258)||(34413155-34413276)
chr6 (142-258)||(28965731-28965847)
chr6 (139-258)||(237286-237405)
chr6 (138-229)||(2881426-2881517)
chr6 (148-249)||(6435109-6435210)
chr6 (142-258)||(3660244-3660360)
chr6 (140-237)||(3339388-3339485)
chr6 (141-229)||(2862165-2862253)
chr6 (134-229)||(1803962-1804057)
chr6 (147-229)||(27334957-27335039)
chr6 (147-229)||(27395697-27395779)
chr6 (183-255)||(26668563-26668635)
chr6 (135-258)||(2056847-2056970)
chr6 (147-249)||(12441600-12441702)
chr6 (140-258)||(17902581-17902699)
chr6 (138-243)||(11017461-11017566)
chr6 (140-258)||(31368501-31368615)
chr6 (157-237)||(17835697-17835777)
chr6 (136-232)||(21210346-21210442)
chr6 (200-243)||(2886694-2886737)
chr6 (133-243)||(9954627-9954737)
chr6 (154-232)||(11635707-11635783)
chr6 (142-232)||(29376607-29376697)
chr6 (147-232)||(1688269-1688354)
chr6 (147-188)||(2689086-2689127)
chr6 (160-232)||(4923036-4923108)
chr6 (195-243)||(16533204-16533252)
chr6 (173-237)||(24437529-24437592)
[»] chr3 (55 HSPs)
chr3 (139-258)||(40478175-40478294)
chr3 (139-258)||(41877752-41877871)
chr3 (136-258)||(45295624-45295746)
chr3 (147-255)||(25542867-25542975)
chr3 (135-258)||(31007233-31007359)
chr3 (140-258)||(42718185-42718301)
chr3 (138-261)||(14992134-14992259)
chr3 (168-258)||(25142692-25142782)
chr3 (139-258)||(52453980-52454099)
chr3 (136-258)||(34021348-34021470)
chr3 (139-249)||(35756053-35756163)
chr3 (133-258)||(11327172-11327297)
chr3 (138-258)||(13159725-13159845)
chr3 (137-232)||(43900862-43900957)
chr3 (135-258)||(50879659-50879782)
chr3 (135-249)||(50279971-50280085)
chr3 (137-258)||(28263609-28263730)
chr3 (136-249)||(30400041-30400154)
chr3 (147-232)||(54233397-54233482)
chr3 (138-258)||(8254091-8254211)
chr3 (137-249)||(36819029-36819141)
chr3 (135-258)||(23163029-23163152)
chr3 (146-232)||(2009744-2009829)
chr3 (147-232)||(23906883-23906968)
chr3 (140-261)||(44855312-44855433)
chr3 (147-232)||(51717531-51717616)
chr3 (142-258)||(20714307-20714423)
chr3 (138-258)||(46344478-46344598)
chr3 (135-243)||(53102786-53102894)
chr3 (139-258)||(3957906-3958025)
chr3 (147-232)||(43441760-43441845)
chr3 (147-252)||(50652458-50652563)
chr3 (138-258)||(3069462-3069582)
chr3 (140-191)||(7039123-7039174)
chr3 (173-232)||(32687882-32687941)
chr3 (142-229)||(32931809-32931896)
chr3 (190-249)||(37303013-37303072)
chr3 (147-249)||(47056421-47056524)
chr3 (169-232)||(47484369-47484432)
chr3 (178-232)||(3483209-3483263)
chr3 (183-237)||(7949873-7949927)
chr3 (147-232)||(9027963-9028047)
chr3 (190-243)||(26279963-26280016)
chr3 (142-243)||(27162358-27162459)
chr3 (190-243)||(32457694-32457747)
chr3 (137-234)||(38957402-38957499)
chr3 (147-243)||(1208025-1208120)
chr3 (200-232)||(1765483-1765515)
chr3 (135-243)||(11173529-11173636)
chr3 (148-188)||(20080082-20080122)
chr3 (138-218)||(23183606-23183686)
chr3 (168-243)||(33007439-33007515)
chr3 (137-181)||(42864202-42864246)
chr3 (147-243)||(49130933-49131028)
chr3 (179-215)||(52678521-52678557)
[»] chr4 (80 HSPs)
chr4 (61-138)||(11645873-11645950)
chr4 (139-258)||(4550398-4550517)
chr4 (137-258)||(51224724-51224845)
chr4 (137-258)||(56025320-56025441)
chr4 (138-249)||(8026651-8026762)
chr4 (147-249)||(55642501-55642603)
chr4 (136-249)||(5208212-5208325)
chr4 (139-258)||(1796430-1796547)
chr4 (139-251)||(24019859-24019973)
chr4 (139-258)||(27001297-27001416)
chr4 (139-265)||(47105968-47106094)
chr4 (139-232)||(9032870-9032963)
chr4 (137-258)||(37022325-37022446)
chr4 (136-258)||(43434404-43434514)
chr4 (137-258)||(44368088-44368209)
chr4 (137-258)||(51377179-51377300)
chr4 (139-249)||(24235393-24235503)
chr4 (139-249)||(31221486-31221596)
chr4 (155-249)||(46844145-46844239)
chr4 (147-232)||(32901419-32901504)
chr4 (155-232)||(36728526-36728603)
chr4 (137-249)||(7037370-7037482)
chr4 (147-243)||(41495092-41495188)
chr4 (138-258)||(45548671-45548791)
chr4 (136-228)||(53384227-53384318)
chr4 (136-243)||(3223068-3223175)
chr4 (183-258)||(54165091-54165168)
chr4 (147-232)||(15638220-15638305)
chr4 (183-255)||(5466427-5466499)
chr4 (147-231)||(20632544-20632628)
chr4 (137-258)||(31048952-31049061)
chr4 (139-243)||(49424708-49424812)
chr4 (138-258)||(55267888-55268008)
chr4 (186-237)||(29406972-29407023)
chr4 (187-258)||(40721900-40721971)
chr4 (135-258)||(42177934-42178057)
chr4 (134-258)||(45779186-45779298)
chr4 (147-232)||(610896-610982)
chr4 (136-230)||(4971898-4971992)
chr4 (185-255)||(45923446-45923515)
chr4 (140-258)||(52669498-52669616)
chr4 (139-229)||(53662330-53662420)
chr4 (147-232)||(2193705-2193790)
chr4 (138-243)||(19910889-19910994)
chr4 (147-232)||(32365563-32365648)
chr4 (135-232)||(36512932-36513028)
chr4 (178-230)||(35580202-35580254)
chr4 (183-227)||(45176665-45176709)
chr4 (183-258)||(20956514-20956589)
chr4 (169-232)||(43358703-43358766)
chr4 (191-258)||(44170559-44170626)
chr4 (169-243)||(9162145-9162219)
chr4 (138-232)||(33483993-33484087)
chr4 (138-232)||(47519607-47519701)
chr4 (138-172)||(54165058-54165092)
chr4 (143-176)||(439294-439327)
chr4 (183-232)||(1562468-1562517)
chr4 (139-184)||(12694316-12694361)
chr4 (138-227)||(13182426-13182515)
chr4 (147-232)||(13267375-13267459)
chr4 (147-232)||(18568711-18568796)
chr4 (147-232)||(20056472-20056557)
chr4 (138-230)||(24154704-24154794)
chr4 (183-232)||(36812335-36812384)
chr4 (190-243)||(39844197-39844250)
chr4 (183-232)||(39880962-39881011)
chr4 (138-171)||(45923517-45923550)
chr4 (183-232)||(48743800-48743849)
chr4 (147-243)||(8681020-8681116)
chr4 (183-243)||(12241137-12241196)
chr4 (179-243)||(19245967-19246031)
chr4 (174-258)||(29949596-29949680)
chr4 (139-227)||(30866445-30866533)
chr4 (169-237)||(31413704-31413772)
chr4 (183-243)||(33820269-33820328)
chr4 (173-237)||(36792417-36792481)
chr4 (169-237)||(38952774-38952842)
chr4 (183-243)||(40756000-40756060)
chr4 (183-231)||(41119458-41119506)
chr4 (200-244)||(46173615-46173659)
[»] chr5 (43 HSPs)
chr5 (139-259)||(7077227-7077347)
chr5 (135-258)||(30574261-30574384)
chr5 (136-258)||(36548265-36548387)
chr5 (137-258)||(19271923-19272044)
chr5 (139-258)||(26685755-26685874)
chr5 (139-258)||(26955486-26955605)
chr5 (134-258)||(12512857-12512981)
chr5 (142-258)||(32634772-32634888)
chr5 (139-258)||(3263396-3263515)
chr5 (139-258)||(15622108-15622227)
chr5 (135-258)||(38010936-38011059)
chr5 (136-249)||(11464008-11464121)
chr5 (137-258)||(12417690-12417811)
chr5 (183-258)||(31006123-31006196)
chr5 (137-232)||(30776709-30776804)
chr5 (136-258)||(35972638-35972756)
chr5 (138-232)||(4292873-4292967)
chr5 (136-249)||(3154528-3154641)
chr5 (147-232)||(8959250-8959335)
chr5 (133-258)||(9594542-9594667)
chr5 (162-258)||(28501681-28501777)
chr5 (142-258)||(33823585-33823701)
chr5 (139-258)||(9596702-9596821)
chr5 (183-258)||(41192651-41192726)
chr5 (136-258)||(22920377-22920499)
chr5 (147-232)||(17489438-17489523)
chr5 (139-258)||(4954530-4954649)
chr5 (139-249)||(10522848-10522958)
chr5 (171-243)||(34381091-34381163)
chr5 (149-232)||(12401282-12401365)
chr5 (139-258)||(25345402-25345521)
chr5 (173-243)||(10232578-10232648)
chr5 (173-243)||(12661869-12661939)
chr5 (134-172)||(34888846-34888884)
chr5 (147-232)||(372616-372701)
chr5 (147-232)||(14914460-14914544)
chr5 (147-232)||(20719912-20719996)
chr5 (179-252)||(25038150-25038223)
chr5 (139-172)||(31006195-31006228)
chr5 (183-232)||(32873081-32873130)
chr5 (186-258)||(16553568-16553640)
chr5 (183-243)||(36415994-36416054)
chr5 (147-243)||(39595353-39595448)
[»] chr7 (45 HSPs)
chr7 (131-258)||(33881585-33881712)
chr7 (139-284)||(5900926-5901069)
chr7 (139-227)||(17157228-17157316)
chr7 (138-229)||(29609764-29609856)
chr7 (139-258)||(26041374-26041493)
chr7 (139-258)||(27164725-27164844)
chr7 (139-258)||(30864305-30864424)
chr7 (147-232)||(10014851-10014936)
chr7 (147-232)||(25614717-25614802)
chr7 (147-232)||(42060747-42060832)
chr7 (137-258)||(44511203-44511324)
chr7 (139-243)||(39369381-39369485)
chr7 (139-258)||(33050247-33050366)
chr7 (147-258)||(42431787-42431898)
chr7 (135-249)||(38978565-38978678)
chr7 (139-258)||(116695-116814)
chr7 (139-228)||(30402081-30402168)
chr7 (147-240)||(42476464-42476557)
chr7 (195-243)||(2469771-2469819)
chr7 (138-258)||(20406605-20406725)
chr7 (138-258)||(29162166-29162286)
chr7 (139-229)||(23330002-23330090)
chr7 (140-229)||(3344955-3345044)
chr7 (147-232)||(8742473-8742558)
chr7 (139-208)||(16645554-16645623)
chr7 (139-208)||(17619915-17619984)
chr7 (137-249)||(19880117-19880229)
chr7 (147-232)||(37385129-37385214)
chr7 (179-232)||(42640933-42640986)
chr7 (147-232)||(47530187-47530272)
chr7 (136-232)||(25332385-25332480)
chr7 (139-249)||(2346947-2347057)
chr7 (173-243)||(19426659-19426728)
chr7 (169-243)||(22331129-22331203)
chr7 (135-249)||(43255451-43255565)
chr7 (173-243)||(47424908-47424977)
chr7 (183-232)||(21037168-21037217)
chr7 (183-232)||(21153142-21153191)
chr7 (190-243)||(30862715-30862768)
chr7 (190-243)||(30982293-30982346)
chr7 (190-243)||(36990120-36990173)
chr7 (147-232)||(44894371-44894455)
chr7 (195-243)||(34348971-34349019)
chr7 (160-232)||(37325728-37325800)
chr7 (137-249)||(37392116-37392228)
[»] scaffold0115 (1 HSPs)
scaffold0115 (140-258)||(35382-35500)
[»] chr2 (55 HSPs)
chr2 (139-255)||(30413620-30413736)
chr2 (135-258)||(43936345-43936466)
chr2 (138-258)||(33003887-33004007)
chr2 (140-258)||(12175217-12175335)
chr2 (138-258)||(10550346-10550466)
chr2 (138-258)||(38021420-38021539)
chr2 (139-258)||(44484544-44484663)
chr2 (137-234)||(36582344-36582441)
chr2 (142-258)||(37966420-37966536)
chr2 (179-258)||(27540079-27540158)
chr2 (137-258)||(3195973-3196094)
chr2 (138-251)||(33029989-33030102)
chr2 (147-232)||(5962728-5962813)
chr2 (142-255)||(22353066-22353179)
chr2 (155-243)||(30973895-30973983)
chr2 (139-237)||(23047971-23048069)
chr2 (135-249)||(29871239-29871353)
chr2 (137-258)||(6884974-6885095)
chr2 (147-243)||(12192026-12192122)
chr2 (145-232)||(9694955-9695042)
chr2 (151-258)||(36383526-36383633)
chr2 (136-258)||(30192236-30192358)
chr2 (147-232)||(36909740-36909824)
chr2 (138-198)||(4097068-4097128)
chr2 (138-258)||(38246638-38246758)
chr2 (139-258)||(29893674-29893793)
chr2 (173-243)||(34138959-34139030)
chr2 (137-243)||(23391141-23391247)
chr2 (147-232)||(26809579-26809665)
chr2 (147-232)||(12358403-12358488)
chr2 (183-232)||(13466007-13466056)
chr2 (174-243)||(14954522-14954591)
chr2 (139-232)||(33857307-33857400)
chr2 (137-229)||(27307131-27307223)
chr2 (186-258)||(39133786-39133858)
chr2 (183-258)||(1298258-1298333)
chr2 (139-258)||(3298993-3299112)
chr2 (183-258)||(6851591-6851666)
chr2 (136-243)||(28165208-28165315)
chr2 (195-249)||(6639416-6639470)
chr2 (139-177)||(6851559-6851597)
chr2 (177-243)||(19913863-19913929)
chr2 (173-243)||(26321620-26321689)
chr2 (180-238)||(34101073-34101131)
chr2 (183-249)||(39744526-39744592)
chr2 (137-186)||(4061983-4062032)
chr2 (168-237)||(13104564-13104633)
chr2 (190-243)||(23880174-23880227)
chr2 (168-237)||(32750083-32750152)
chr2 (171-232)||(41353417-41353478)
chr2 (195-243)||(16051332-16051380)
chr2 (137-169)||(27540156-27540188)
chr2 (183-243)||(31635742-31635802)
chr2 (4-44)||(37480090-37480130)
chr2 (147-243)||(38572018-38572114)
[»] chr8 (62 HSPs)
chr8 (136-234)||(11089664-11089763)
chr8 (135-258)||(43587705-43587828)
chr8 (139-258)||(34972131-34972248)
chr8 (139-258)||(38504234-38504353)
chr8 (139-258)||(43602311-43602430)
chr8 (142-254)||(23952562-23952673)
chr8 (135-258)||(1065481-1065604)
chr8 (139-258)||(30927819-30927938)
chr8 (135-258)||(41273579-41273702)
chr8 (139-232)||(6105323-6105416)
chr8 (135-243)||(6825161-6825269)
chr8 (142-258)||(41293613-41293728)
chr8 (139-249)||(39258943-39259053)
chr8 (147-232)||(11138986-11139071)
chr8 (138-258)||(19723093-19723213)
chr8 (147-231)||(30129500-30129584)
chr8 (183-258)||(29509330-29509405)
chr8 (147-237)||(2597056-2597146)
chr8 (142-232)||(33817247-33817337)
chr8 (147-232)||(5925145-5925230)
chr8 (136-229)||(14228786-14228879)
chr8 (139-260)||(14531683-14531804)
chr8 (147-243)||(37562037-37562133)
chr8 (139-258)||(40211635-40211754)
chr8 (191-249)||(6849408-6849466)
chr8 (173-243)||(11879412-11879482)
chr8 (173-243)||(11896828-11896898)
chr8 (147-249)||(36064103-36064205)
chr8 (147-249)||(36497734-36497836)
chr8 (147-232)||(43186386-43186469)
chr8 (147-232)||(5924900-5924985)
chr8 (135-188)||(12783762-12783815)
chr8 (147-232)||(34765746-34765831)
chr8 (138-243)||(36593673-36593778)
chr8 (178-243)||(37033029-37033093)
chr8 (179-232)||(39153612-39153665)
chr8 (166-258)||(13884380-13884472)
chr8 (173-249)||(30925577-30925652)
chr8 (183-243)||(40719576-40719636)
chr8 (135-249)||(6745926-6746041)
chr8 (171-229)||(41519951-41520010)
chr8 (179-242)||(44086440-44086503)
chr8 (139-249)||(6656227-6656337)
chr8 (139-249)||(6736629-6736739)
chr8 (147-237)||(7129618-7129707)
chr8 (147-248)||(8888326-8888428)
chr8 (139-249)||(20288606-20288716)
chr8 (139-249)||(21075235-21075345)
chr8 (169-243)||(22836057-22836131)
chr8 (135-243)||(34474028-34474137)
chr8 (142-232)||(35595300-35595390)
chr8 (138-187)||(9208065-9208114)
chr8 (135-216)||(13565402-13565483)
chr8 (135-176)||(27630893-27630934)
chr8 (190-243)||(28473484-28473537)
chr8 (183-232)||(30608642-30608691)
chr8 (138-227)||(34970300-34970389)
chr8 (200-249)||(39027557-39027606)
chr8 (195-255)||(11114613-11114673)
chr8 (168-244)||(22767208-22767284)
chr8 (137-229)||(37568498-37568590)
chr8 (195-243)||(40102102-40102150)
[»] chr1 (47 HSPs)
chr1 (137-258)||(10385478-10385599)
chr1 (139-258)||(43195977-43196096)
chr1 (136-251)||(49189096-49189211)
chr1 (138-258)||(5383823-5383943)
chr1 (138-258)||(37669462-37669582)
chr1 (174-258)||(2257617-2257701)
chr1 (136-258)||(6829670-6829792)
chr1 (148-258)||(36669267-36669377)
chr1 (137-258)||(13813622-13813743)
chr1 (135-232)||(19920852-19920949)
chr1 (138-258)||(27578246-27578366)
chr1 (139-258)||(26501359-26501478)
chr1 (164-255)||(39669873-39669964)
chr1 (139-258)||(50035426-50035545)
chr1 (136-258)||(3291310-3291432)
chr1 (147-232)||(42843240-42843325)
chr1 (138-258)||(7371835-7371955)
chr1 (147-243)||(50777319-50777415)
chr1 (147-258)||(9011709-9011820)
chr1 (147-249)||(50797853-50797955)
chr1 (179-232)||(10302271-10302324)
chr1 (137-258)||(25130767-25130888)
chr1 (137-258)||(25995524-25995647)
chr1 (139-243)||(27895649-27895752)
chr1 (135-258)||(29489243-29489366)
chr1 (183-249)||(29362624-29362690)
chr1 (179-232)||(8670162-8670215)
chr1 (147-232)||(51193029-51193114)
chr1 (138-178)||(24749629-24749669)
chr1 (137-177)||(27563617-27563657)
chr1 (183-243)||(42615936-42615996)
chr1 (147-255)||(43457716-43457823)
chr1 (147-246)||(7078396-7078495)
chr1 (173-243)||(15061924-15061994)
chr1 (200-258)||(26585122-26585180)
chr1 (147-216)||(46902708-46902778)
chr1 (178-231)||(366748-366801)
chr1 (180-241)||(4618725-4618786)
chr1 (135-243)||(22389411-22389517)
chr1 (186-255)||(27563551-27563620)
chr1 (135-172)||(51704683-51704720)
chr1 (201-258)||(51704737-51704794)
chr1 (179-215)||(3606024-3606060)
chr1 (181-249)||(8905801-8905869)
chr1 (168-244)||(25302562-25302638)
chr1 (139-243)||(35043608-35043712)
chr1 (147-243)||(40610308-40610403)
[»] scaffold0172 (1 HSPs)
scaffold0172 (139-258)||(17039-17158)
[»] scaffold0514 (1 HSPs)
scaffold0514 (138-243)||(1383-1488)
[»] scaffold0085 (1 HSPs)
scaffold0085 (139-258)||(31188-31307)
[»] scaffold0002 (1 HSPs)
scaffold0002 (138-258)||(147143-147263)
[»] scaffold0522 (1 HSPs)
scaffold0522 (139-243)||(2392-2496)
[»] scaffold0004 (1 HSPs)
scaffold0004 (137-232)||(249028-249123)
[»] scaffold0121 (1 HSPs)
scaffold0121 (136-252)||(29852-29969)
[»] scaffold0119 (1 HSPs)
scaffold0119 (183-255)||(2158-2230)
[»] scaffold0027 (1 HSPs)
scaffold0027 (147-255)||(5146-5254)
[»] scaffold0011 (1 HSPs)
scaffold0011 (139-243)||(18674-18777)
[»] scaffold0193 (1 HSPs)
scaffold0193 (138-232)||(24763-24857)
[»] scaffold0054 (1 HSPs)
scaffold0054 (169-243)||(31518-31592)
[»] scaffold0003 (1 HSPs)
scaffold0003 (136-237)||(88893-88994)
[»] scaffold0618 (1 HSPs)
scaffold0618 (138-258)||(3424-3545)
[»] scaffold0049 (1 HSPs)
scaffold0049 (147-232)||(72067-72152)


Alignment Details
Target: scaffold0576 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 133 - 254
Target Start/End: Complemental strand, 9619 - 9498
Alignment:
Q  133 tgaaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||| ||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  9619 tgaaatgagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtaaaaaacaatggagagagaaaa 9520  T
Q  233 gggaatagagaagataataaca 254  Q
     |||| ||||| ||||||||||    
T  9519 aggaagagagaggataataaca 9498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 4e-41; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 133 - 254
Target Start/End: Complemental strand, 15364848 - 15364727
Alignment:
Q  133 tgaaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||| ||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  15364848 tgaaatgagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtaaaaaacaatggagagagaaaa 15364749  T
Q  233 gggaatagagaagataataaca 254  Q
     |||| ||||| ||||||||||    
T  15364748 aggaagagagaggataataaca 15364727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 133 - 258
Target Start/End: Complemental strand, 15328678 - 15328553
Alignment:
Q  133 tgaaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||| ||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||| ||||| |||||||||||||||    
T  15328678 tgaaatgagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtcaaaaacaatggagagagaaaa 15328579  T
Q  233 gggaatagagaagataataacatcat 258  Q
     |||| | ||| ||||||||||||||    
T  15328578 aggaagaaagaggataataacatcat 15328553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 137 - 258
Target Start/End: Original strand, 25924750 - 25924871
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||    
T  25924750 aagagcaatgatatttgtacattcatttaatgacaactttggtgacaactttgttttcctctcttttgattggtcaaaaacaatggagagagaaaaagga 25924849  T
Q  237 atagagaagataataacatcat 258  Q
    | ||||   |||||||||||||    
T  25924850 agagagcgaataataacatcat 25924871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 32784923 - 32784802
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||||| |||||| |||||  ||||||||||||||||||||| || |||||||| |||| |||||||| || |||||||||||||| |||||| |||    
T  32784923 aagagcaatgatatttctacatttatttaatgacaattttggtgacaattttgtttttctctcttttgattagtcaaaaataatggagaaagaaaaagga 32784824  T
Q  237 atagagaagataataacatcat 258  Q
    | ||||| ||||||||||||||    
T  32784823 agagagaggataataacatcat 32784802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 34413276 - 34413155
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||| ||||||| |||  ||| ||||||||||| ||||| ||||| ||||||||| |||    
T  34413276 aagagcaatgatatttgtacatcaatttaatgacaattttggtgacaactttgattttttctcttttgattggtcaaaaacaatggggagagaaaaagga 34413177  T
Q  237 atagagaagataataacatcat 258  Q
    | |||||  |||| ||||||||    
T  34413176 agagagagaataacaacatcat 34413155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 142 - 258
Target Start/End: Original strand, 28965731 - 28965847
Alignment:
Q  142 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 241  Q
    |||| |||| ||||||||||||||||||||| |||||||||||||||||||  |||| ||||||||||| ||||| |||| ||||||||||  ||| |||    
T  28965731 caatgatatatgtacatccatttaatgacaactttggtgataactttgtttctctctcttttgattggtcaaaaacaatgaagagagaaaaaagaagaga 28965830  T
Q  242 gaagataataacatcat 258  Q
    ||| ||||||| |||||    
T  28965831 gaatataataatatcat 28965847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 237286 - 237405
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||| ||||| |||||||||||| ||| |||| | ||||||||| |||| || | |||||| ||||||||||||||||||||| |||      
T  237286 gagcaatgatatttggacatctatttaatgacaacttttgtgacatctttgtttttctctcttcttattggtcaaaaataatggagagagaaaaaggatg 237385  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| ||||||||    
T  237386 agagacgataagaacatcat 237405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 2881517 - 2881426
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 229  Q
    |||||||| ||||||| |||||||||||||||||| |||||||| ||||||||||  |||| || | |||||| ||||||||| ||||||||    
T  2881517 agagcaatgatatttggacatccatttaatgacaactttggtgacaactttgtttctctctcttcttattggtcaaaaataatagagagaga 2881426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 249
Target Start/End: Complemental strand, 6435210 - 6435109
Alignment:
Q  148 tatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagat 247  Q
    |||||||||||||| || |||||||||||||||| ||| ||||||| |||| || | |||||| ||||| |||||| |||||||| | || |||||||||    
T  6435210 tatttgtacatccaattgatgacaattttggtgacaaccttgtttttctctcttcttattggttaaaaacaatggatagagaaaaagtaagagagaagat 6435111  T
Q  248 aa 249  Q
    ||    
T  6435110 aa 6435109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 258
Target Start/End: Original strand, 3660244 - 3660360
Alignment:
Q  142 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 241  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| |||| |||||| ||||| |||| ||||||||||  ||| |||    
T  3660244 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctctttttattggtcaaaaacaatgcagagagaaaaaagaagaga 3660343  T
Q  242 gaagataataacatcat 258  Q
    |||||||| | ||||||    
T  3660344 gaagataagaccatcat 3660360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 3339388 - 3339485
Alignment:
Q  140 agcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||| |||||||||||||||||| ||||||| ||| |||| ||  ||||||| |||| |||| |||||| ||||| ||| ||||||||||| ||||    
T  3339388 agcaatgatatttgtacatccatttcatgacaactttagtgacaatcttgtttttctctctttttattggtcaaaaacaatagagagagaaaaaggaa 3339485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 2862253 - 2862165
Alignment:
Q  141 gcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 229  Q
    ||||| ||||||| |||||||||||||||||| |||||||| || |||||||  |||| || | |||||| ||||||||| ||||||||    
T  2862253 gcaatgatatttggacatccatttaatgacaactttggtgacaattttgtttctctcttttcttattggtcaaaaataatagagagaga 2862165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 1804057 - 1803962
Alignment:
Q  134 gaaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 229  Q
    |||||||| | | ||||||||||||||| || ||||||| |||||||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||    
T  1804057 gaaaagagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagaga 1803962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 27335039 - 27334957
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 229  Q
    |||||||||||||||||| ||||||| |||  ||| ||| ||||||| |||| |||| |||||| ||||||||| ||||||||    
T  27335039 atatttgtacatccatttcatgacaactttaatgacaaccttgtttttctctctttttattggtcaaaaataatagagagaga 27334957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 27395779 - 27395697
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 229  Q
    |||||||||||||||||| ||||||| |||  ||| ||| ||||||| |||| |||| |||||| ||||||||| ||||||||    
T  27395779 atatttgtacatccatttcatgacaactttaatgacaaccttgtttttctctctttttattggtcaaaaataatagagagaga 27395697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 26668635 - 26668563
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 255  Q
    |||||||||||||||| ||||||||| | |||||||||  | |||||||| |||| ||||| |||||||||||    
T  26668635 aactttgttttcctctcttttgattgatcaaaaataataaaaagagaaaaaggaagagagaggataataacat 26668563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 258
Target Start/End: Complemental strand, 2056970 - 2056847
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||||||| |||||||||||| ||||  ||||||| ||| |||| ||| ||||||  |||| || | |||||| ||||| |||||| ||||||||      
T  2056970 aaaagagcaatgatatttgtacattcattccatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatggatagagaaaaaa 2056871  T
Q  235 gaatagagaagataataacatcat 258  Q
    ||| ||||| ||||| | ||||||    
T  2056870 gaagagagaggataagaccatcat 2056847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 249
Target Start/End: Complemental strand, 12441702 - 12441600
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 246  Q
    ||||||||||||| | || ||||||| |||||||| ||| ||| ||| |||| || | || ||| ||||| ||||||||||||||| | || ||||||||    
T  12441702 atatttgtacatctaattgatgacaactttggtgacaaccttgcttttctctcttcttatcggttaaaaacaatggagagagaaaaagtaagagagaaga 12441603  T
Q  247 taa 249  Q
    |||    
T  12441602 taa 12441600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 17902581 - 17902699
Alignment:
Q  140 agcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaata 239  Q
    |||||| ||||||||||||| |||  ||||||| ||| |||||||  ||||||| |||| || | |||||| ||||| |||||||||| ||||  ||| |    
T  17902581 agcaatgatatttgtacatctattccatgacaactttagtgataatattgtttttctctcttcttattggtcaaaaacaatggagagataaaaaagaaga 17902680  T
Q  240 gagaagataataacatcat 258  Q
    |||| ||||| | ||||||    
T  17902681 gagaggataagaccatcat 17902699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 11017566 - 11017461
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||| | |||||||||||||||||  || |||| ||| |||| ||| ||||||  |||| || | |||||| ||||| ||||||||||||||| ||||    
T  11017566 agagcagtgatatttgtacatccattccataacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatggagagagaaaaaggaa 11017467  T
Q  238 tagaga 243  Q
     |||||    
T  11017466 aagaga 11017461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 31368501 - 31368615
Alignment:
Q  140 agcaataatatttgtacatccattt---aatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    |||||| ||||||||||||||||||   |||||||| |||||||| ||||||||||       |||| |||||||||||| ||| || ||||||||  ||    
T  31368501 agcaatgatatttgtacatccatttatgaatgacaactttggtgacaactttgttt-------tttttattggtaaaaaacaatagatagagaaaaatga 31368593  T
Q  237 atagagaagataataacatcat 258  Q
    | ||| | ||||||||||||||    
T  31368594 agagataggataataacatcat 31368615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 17835777 - 17835697
Alignment:
Q  157 atccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||||| ||||| |||  ||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| ||||    
T  17835777 atccatttaaggacaactttaatgacaactttgtttttctctcttcttattggttaaaaacaatggagagagaaaaaggaa 17835697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 21210442 - 21210346
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||||||||| |||||| |||||||| | |||||||| || | ||| ||| ||||||| |||| || | |||| | ||||| |||||||||||||||    
T  21210442 aaagagcaatgatatttatacatccagtgaatgacaacttagttgacaaccttgtttttctctcttcttattgattaaaaacaatggagagagaaaa 21210346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 2886737 - 2886694
Alignment:
Q  200 ttttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||    
T  2886737 ttttcattggtaaaaaacaatggagagagaaaaaggaatagaga 2886694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 243
Target Start/End: Complemental strand, 9954737 - 9954627
Alignment:
Q  133 tgaaaagagcaataatatttgtacatccatttaatgacaa-ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaa 231  Q
    ||||||||| | | ||||||| ||| ||||||||| |||| ||||||||| |||||  | || |||| |||| |||||| ||||| ||||||||||||||    
T  9954737 tgaaaagaggagtgatatttgaacaaccatttaat-acaacttttggtgacaacttcttctttctctcttttcattggttaaaaacaatggagagagaaa 9954639  T
Q  232 agggaatagaga 243  Q
    | |||| |||||    
T  9954638 acggaagagaga 9954627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 11635783 - 11635707
Alignment:
Q  154 tacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||| | |||||||||| ||| |||| ||||||  | | |||| |||||| |||||||||||||||||||||    
T  11635783 tacatccatttgaagacaattttgatgacaactctgtttt--tttttttttattggtcaaaaataatggagagagaaaa 11635707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 29376607 - 29376697
Alignment:
Q  142 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||| ||||||||||||| ||||| ||||||||||| ||| |||  |||||| |||| || | |||||| | ||| |||||||| ||||||    
T  29376607 caatgatatttgtacatctatttagtgacaattttgatgacaaccatgttttgctctcttcttattggttataaacaatggagaaagaaaa 29376697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 1688269 - 1688354
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||| ||| ||||||  |||||||| |  ||| |||||  ||||||||| |||| |||||| ||||| |||||||||||||||    
T  1688269 atatttgaacaaccattttttgacaattatcttgacaacttctttttcctctctttttattggttaaaaacaatggagagagaaaa 1688354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 2689127 - 2689086
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataacttt 188  Q
    ||||||| |||||||||||||||||||||| |||| ||||||    
T  2689127 atatttgaacatccatttaatgacaatttttgtgacaacttt 2689086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 4923108 - 4923036
Alignment:
Q  160 catttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||| ||||||| |||  |||||| |||||||| |||| || | |||||| ||||||||| |||||||||||    
T  4923108 catttgatgacaacttttatgataattttgtttttctctcttcttattggttaaaaataattgagagagaaaa 4923036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 16533204 - 16533252
Alignment:
Q  195 ctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  16533204 ctctcttttcattggtaaaaaacaatggagagagaaaaaggaagagaga 16533252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 24437592 - 24437529
Alignment:
Q  173 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    ||||| ||| |||||| ||||||||| |||| |||||| ||||| ||||||||||||||| ||||    
T  24437592 ttttgatgacaacttt-ttttcctctttttttattggttaaaaacaatggagagagaaaaaggaa 24437529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 6e-40; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 40478175 - 40478294
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| |||| |||||||||| ||||     
T  40478175 gagcaatgatatttgtacatccatttaatgacaattttggtgacaactttgttttcctctcttttgattggtcaaaaacaatgaagagagaaaaaggaag 40478274  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||||||||||||    
T  40478275 agagaggataataacatcat 40478294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 41877871 - 41877752
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| |||| ||||||||||| ||||| ||||||||||||||| ||||     
T  41877871 gagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgtttttctcttttttgattggtcaaaaacaatggagagagaaaaaggaag 41877772  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||||||||||||    
T  41877771 agagaggataataacatcat 41877752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 136 - 258
Target Start/End: Original strand, 45295624 - 45295746
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 235  Q
    |||||||||| |||||||||||||||||||||||||  |||||||| |||||||||||||||| ||||||||||| ||||| |||| |||||||||| ||    
T  45295624 aaagagcaatgatatttgtacatccatttaatgacagctttggtgacaactttgttttcctctcttttgattggtcaaaaacaatgtagagagaaaaagg 45295723  T
Q  236 aatagagaagataataacatcat 258  Q
    || ||||| ||||||||||||||    
T  45295724 aagagagaggataataacatcat 45295746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 147 - 255
Target Start/End: Original strand, 25542867 - 25542975
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 246  Q
    ||||||||||||||||||||||| || ||| |||| ||||||| |||||||| ||||||||||| ||||| |||| |||||||||| |||| ||||| ||    
T  25542867 atatttgtacatccatttaatgataactttagtgacaactttggtttcctctcttttgattggtcaaaaacaatgaagagagaaaaaggaagagagagga 25542966  T
Q  247 taataacat 255  Q
    |||||||||    
T  25542967 taataacat 25542975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 258
Target Start/End: Original strand, 31007233 - 31007359
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgat---aactttgttttcctctattttgattggtaaaaaataatggagagagaaa 231  Q
    ||||||||||| |||||||||||| |||||||||| || ||||||| |   |||||||||||||||| ||||||||||| ||||| |||| | |||||||    
T  31007233 aaaagagcaatcatatttgtacattcatttaatgataactttggtggtgacaactttgttttcctctcttttgattggttaaaaacaatgaaaagagaaa 31007332  T
Q  232 agggaatagagaagataataacatcat 258  Q
    | |||| ||||| ||||||||||||||    
T  31007333 aaggaagagagaggataataacatcat 31007359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 258
Target Start/End: Complemental strand, 42718301 - 42718185
Alignment:
Q  140 agcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaata 239  Q
    |||||| |||| ||||||| |||||||||||||||||||||| ||||||||||  |||| ||||||||||| ||||| |||| ||||||||||  ||| |    
T  42718301 agcaatgatatatgtacattcatttaatgacaattttggtgacaactttgttt--ctctcttttgattggtcaaaaacaatgaagagagaaaaaagaaaa 42718204  T
Q  240 gagaagataataacatcat 258  Q
    ||||| |||||||||||||    
T  42718203 gagaatataataacatcat 42718185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 261
Target Start/End: Complemental strand, 14992259 - 14992134
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataat--ggagagagaaaaggg 235  Q
    |||| ||| |||||||||||||||||||||||||| |||||||| |||||||||||  ||| ||||||||||| ||| | |||   ||||||||| | ||    
T  14992259 agagaaatgatatttgtacatccatttaatgacaactttggtgacaactttgttttattcttttttgattggtcaaacacaataaagagagagaacaagg 14992160  T
Q  236 aatagagaagataataacatcatctg 261  Q
    || ||||| |||||||||||||||||    
T  14992159 aaaagagaggataataacatcatctg 14992134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 25142782 - 25142692
Alignment:
Q  168 gacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 258  Q
    ||||| ||||||||| ||||||||||||||| |||| |||||| ||||| ||||||||||||||| |||| ||||| ||||||||||||||    
T  25142782 gacaactttggtgattactttgttttcctctcttttaattggtcaaaaacaatggagagagaaaaaggaagagagaggataataacatcat 25142692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 52453980 - 52454099
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||| ||||||| ||| |||| ||||||||||  |||| || | |||||| ||||| ||||||||||||||| ||||     
T  52453980 gagcaatgatatttgtacatccatttcatgacaactttagtgacaactttgtttctctctcttcttattggtcaaaaacaatggagagagaaaaaggaag 52454079  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| | ||||||    
T  52454080 agagaggataagaccatcat 52454099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 258
Target Start/End: Original strand, 34021348 - 34021470
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 235  Q
    |||||||||| |||||||||||||||||  ||||||| ||| |||| ||||||||||| |||| || | |||||| ||||| ||| ||||||||||| ||    
T  34021348 aaagagcaatgatatttgtacatccattccatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatagagagagaaaaagg 34021447  T
Q  236 aatagagaagataataacatcat 258  Q
    || ||||| ||||| | ||||||    
T  34021448 aagagagaggataagaccatcat 34021470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 35756163 - 35756053
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||||||||| |||| ||||||| |||||||| ||||||||||| |||| || | |||||| ||||| |||||||||||||||  |||     
T  35756163 gagcaatcatatttgtacatctatttcatgacaactttggtgacaactttgtttttctctcttcttattggttaaaaacaatggagagagaaaaatgaag 35756064  T
Q  239 agagaagataa 249  Q
    ||||| |||||    
T  35756063 agagatgataa 35756053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 258
Target Start/End: Complemental strand, 11327297 - 11327172
Alignment:
Q  133 tgaaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||| |||| ||| ||||||  |||| || | |||||| ||||| ||| |||||||||||    
T  11327297 tgaaaagagcaatgatatttgtacatccatttcatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatagagagagaaaa 11327198  T
Q  233 gggaatagagaagataataacatcat 258  Q
     |||| ||||| ||||| | ||||||    
T  11327197 aggaagagagaggataagaccatcat 11327172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 13159845 - 13159725
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||    
T  13159845 agagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaa 13159746  T
Q  238 tagagaagataataacatcat 258  Q
     ||||| ||||| | ||||||    
T  13159745 gagagacgataagaccatcat 13159725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 232
Target Start/End: Complemental strand, 43900957 - 43900862
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||| ||||||  |||||||||||| ||||| ||| |||| ||||||||||| |||| || | |||||| |||||||||||||||||||||    
T  43900957 aagagcaatgatattttgacatccatttaaggacaactttagtgacaactttgtttttctctcttcttattggttaaaaataatggagagagaaaa 43900862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 258
Target Start/End: Complemental strand, 50879782 - 50879659
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||| ||| |||||||||||||||||  ||||||| ||| |||| ||||||||| | |||| || | |||||| ||| | ||||||||||||||| |    
T  50879782 aaaagagaaatgatatttgtacatccattccatgacaactttagtgacaactttgttgttctctcttcttattggtcaaacacaatggagagagaaaaag 50879683  T
Q  235 gaatagagaagataataacatcat 258  Q
    ||| ||||||||||| | ||||||    
T  50879682 gaagagagaagataagaccatcat 50879659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 135 - 249
Target Start/End: Original strand, 50279971 - 50280085
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||||||| |||||||||||||||||| ||||||| |||  ||| ||| ||||||| |||| || | ||| || ||||| ||||||||||||||| |    
T  50279971 aaaagagcaatgatatttgtacatccatttcatgacaactttaatgacaaccttgtttttctctcttcttatttgtcaaaaacaatggagagagaaaaag 50280070  T
Q  235 gaatagagaagataa 249  Q
    ||| ||||| |||||    
T  50280071 gaagagagaggataa 50280085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 28263730 - 28263609
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||||| |||||||| ||||||||| ||||||| ||| |||| |||||| |||| || | || | |||||| ||||| ||||||||||||||| |||    
T  28263730 aagagcaatgatatttgttcatccatttcatgacaactttagtgacaactttatttttctttcttcttattggtcaaaaacaatggagagagaaaaagga 28263631  T
Q  237 atagagaagataataacatcat 258  Q
    | ||||| ||||| | ||||||    
T  28263630 agagagaggataagaccatcat 28263609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 249
Target Start/End: Original strand, 30400041 - 30400154
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 235  Q
    |||||||||| |||||||||||||||||  ||||||| ||| |||| ||  ||||||| |||| || | |||||| ||||| ||||||||||||||| ||    
T  30400041 aaagagcaattatatttgtacatccattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagg 30400140  T
Q  236 aatagagaagataa 249  Q
    || ||||| |||||    
T  30400141 aagagagaggataa 30400154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 54233397 - 54233482
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||    
T  54233397 atatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 54233482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 8254211 - 8254091
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| |||||||||||||||||| ||||||||||| |||| ||| || |||  |||| || | || ||  ||||| ||||||||||||||| ||||    
T  8254211 agagcaatgatatttgtacatccatttcatgacaattttagtgacaacattatttctctctcttcttatcggctaaaaacaatggagagagaaaaaggaa 8254112  T
Q  238 tagagaagataataacatcat 258  Q
     ||||| ||||| | ||||||    
T  8254111 gagagatgataagaccatcat 8254091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 249
Target Start/End: Complemental strand, 36819141 - 36819029
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    |||| |||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||  ||    
T  36819141 aagaacaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaatga 36819042  T
Q  237 atagagaagataa 249  Q
    | ||||| |||||    
T  36819041 agagagaggataa 36819029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 258
Target Start/End: Original strand, 23163029 - 23163152
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||||||| ||||||  ||||| |||  ||||||||||| |||| || |||||||| |||| || | |||||| ||||| |||| |||||||||| |    
T  23163029 aaaagagcaatgatatttagacatcaattccatgacaattttagtgacaattttgtttttctcttttcttattggtcaaaaagaatgaagagagaaaaag 23163128  T
Q  235 gaatagagaagataataacatcat 258  Q
    ||| ||||| ||||| | ||||||    
T  23163129 gaagagagaggataagaccatcat 23163152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 232
Target Start/End: Complemental strand, 2009829 - 2009744
Alignment:
Q  146 aatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||||||||||||| ||||| |||||| |||||||| ||| ||| ||| |||| || | |||||| |||||||||||||||||||||    
T  2009829 aatatttgtacatcaattta-tgacaactttggtgacaaccttgcttttctctcttcttattggtcaaaaataatggagagagaaaa 2009744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 23906883 - 23906968
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||| ||| |||| || | |||||| ||||| |||||||||||||||    
T  23906883 atatttgtacatccaattgatgacaactttggtgacaaccttgcttttctctcttcttattggtcaaaaacaatggagagagaaaa 23906968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 261
Target Start/End: Complemental strand, 44855433 - 44855312
Alignment:
Q  140 agcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaata 239  Q
    |||||| ||||||||||||| |||| ||||||| ||| |||| ||  || |||| |||| || | |||||| ||||| ||||||||||||||| |||| |    
T  44855433 agcaatgatatttgtacatcaatttcatgacaactttagtgacaatcttatttttctctcttcttattggttaaaaaaaatggagagagaaaaaggaaga 44855334  T
Q  240 gagaagataataacatcatctg 261  Q
    || | ||||| |||||| ||||    
T  44855333 gaaatgataagaacatcgtctg 44855312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 51717616 - 51717531
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||| ||| |||| || |  |||||||||||||||||||||| ||||    
T  51717616 atatttgtacatccaattgatgacaactttggtgacaaccttgcttttctctcttcttgttggtaaaaaataatggagagaaaaaa 51717531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 258
Target Start/End: Complemental strand, 20714423 - 20714307
Alignment:
Q  142 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 241  Q
    |||| |||||||||||||||||  |||| |||||| |||| ||| || |||| || | || | |||||| ||||| ||||||||||||||| |||| |||    
T  20714423 caatgatatttgtacatccattccatgataattttagtgacaaccttatttttctatcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 20714324  T
Q  242 gaagataataacatcat 258  Q
    || ||||| | ||||||    
T  20714323 gaggataagaccatcat 20714307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 46344598 - 46344478
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| |||||||||||| ||||| | ||||| ||| |||| ||| || |||| || | || | |||||| |||||||||||||| |||||| ||||    
T  46344598 agagcaatgatatttgtacattcatttcacgacaactttagtgacaaccttatttttctttcttcttattggtcaaaaataatggagaaagaaaaaggaa 46344499  T
Q  238 tagagaagataataacatcat 258  Q
     ||||| ||||| | ||||||    
T  46344498 gagagaggataagaccatcat 46344478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 135 - 243
Target Start/End: Original strand, 53102786 - 53102894
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||| ||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||| | ||||| |||||||||| |||| |    
T  53102786 aaaagggcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattgatcaaaaacaatggagagaaaaaaag 53102885  T
Q  235 gaatagaga 243  Q
    ||| |||||    
T  53102886 gaagagaga 53102894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 3957906 - 3958025
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||  | ||||| ||| |||| ||| ||||||| || | || | ||| || ||||| ||||||||||||||| ||||     
T  3957906 gagcaatgatatttgtacatccattccaggacaactttagtgacaaccttgtttttctatcttcttatttgtcaaaaacaatggagagagaaaaaggaag 3958005  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| | ||||||    
T  3958006 agagaggataagaccatcat 3958025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 43441845 - 43441760
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||||| || ||||||| ||||  || ||| ||  ||| |||| |||| |||||| |||||||||||||||||||||    
T  43441845 atatttgtacatccaattgatgacaactttgacgacaaccttacttttctctttttttattggtcaaaaataatggagagagaaaa 43441760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 50652563 - 50652458
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 246  Q
    ||||||||||||  | || |||||||||||| ||| || |||| ||| |||| || | |||||| ||||| ||||||||||| ||| |||| ||||| ||    
T  50652563 atatttgtacatttaattgatgacaattttgatgacaattttgcttttctctcttcttattggtcaaaaacaatggagagagtaaaaggaagagagagga 50652464  T
Q  247 taataa 252  Q
    ||||||    
T  50652463 taataa 50652458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 3069462 - 3069582
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| ||||||| |||||||||  ||||||| ||| |||  ||  ||||||| |||| || | |||||| ||||| |||||||||||| || ||||    
T  3069462 agagcaatgatatttgcacatccattccatgacaactttagtgggaatcttgtttttctctcttcttattggtcaaaaacaatggagagagataaaggaa 3069561  T
Q  238 tagagaagataataacatcat 258  Q
     ||||| ||||| | ||||||    
T  3069562 gagagaggataagaccatcat 3069582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 7039123 - 7039174
Alignment:
Q  140 agcaataatatttgtacatccatttaatgacaattttggtgataactttgtt 191  Q
    |||||| |||||||||| ||||||| ||||||||||| |||||||| |||||    
T  7039123 agcaatgatatttgtacttccatttcatgacaattttagtgataaccttgtt 7039174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 32687882 - 32687941
Alignment:
Q  173 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||||||||||||||  |||| |||| |||| |||||| ||||| |||||||||||||||    
T  32687882 ttttggtgataacttcttttttctctcttttcattggttaaaaacaatggagagagaaaa 32687941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 32931809 - 32931896
Alignment:
Q  142 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 229  Q
    |||| |||||||||||||||||| |  |||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||    
T  32931809 caatgatatttgtacatccatttcacaacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagaga 32931896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 37303013 - 37303072
Alignment:
Q  190 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 249  Q
    |||| |||| |||| |||||||||||| ||||||||||||||| |||| |||||| ||||    
T  37303013 tttttctctcttttcattggtaaaaaacaatggagagagaaaaaggaagagagaaaataa 37303072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 249
Target Start/End: Original strand, 47056421 - 47056524
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggt-aaaaaataatggagagagaaaagggaatagagaag 245  Q
    ||||||||||||||| || |||||||||||| ||| ||| ||  ||| |||| |||  |||||| |||||  ||| ||||||||||| |||| |||||||    
T  47056421 atatttgtacatccagttgatgacaattttgatgacaaccttacttttctctctttctattggtcaaaaaccaattgagagagaaaaaggaagagagaag 47056520  T
Q  246 ataa 249  Q
    ||||    
T  47056521 ataa 47056524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 47484432 - 47484369
Alignment:
Q  169 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||||||| | |||||||||||| | |||| |||| |||||| ||||| |||||||||||||||    
T  47484432 acaatttttgggataactttgttgtgctctcttttcattggtcaaaaacaatggagagagaaaa 47484369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 232
Target Start/End: Complemental strand, 3483263 - 3483209
Alignment:
Q  178 gtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||| |||||| |||| |||| |||| |||| |||||||||||||||||||||||    
T  3483263 gtgacaactttttttttctctcttttcattgataaaaaataatggagagagaaaa 3483209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 7949927 - 7949873
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||| |||| |||| ||||||||||| ||||| ||||||||||||||| ||||    
T  7949927 aactttatttttctctcttttgattggttaaaaaaaatggagagagaaaaaggaa 7949873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 9028047 - 9027963
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||| ||| |||||| || || ||||| |||| ||||| ||||  ||||||||| |||||| ||||| |||||||||||||||    
T  9028047 atatttgaacaaccatttgat-acgatttttgtgacaacttcgtttctctctatttttattggtcaaaaacaatggagagagaaaa 9027963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 26280016 - 26279963
Alignment:
Q  190 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  26280016 ttttcctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 26279963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 27162358 - 27162459
Alignment:
Q  142 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 241  Q
    |||| |||||| ||||| |||||| |||||| |||  ||| ||||||  ||| || | |||| |||||| |||||||||||||||| |||| |||| |||    
T  27162358 caatgatatttctacattcatttattgacaactttattgacaactttacttttctatctttttattggttaaaaataatggagagaaaaaaaggaagaga 27162457  T
Q  242 ga 243  Q
    ||    
T  27162458 ga 27162459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 32457694 - 32457747
Alignment:
Q  190 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||| |||| |||| |||||| ||||||||||||||||||||| |||| |||||    
T  32457694 tttttctctcttttcattggttaaaaataatggagagagaaaaaggaagagaga 32457747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 234
Target Start/End: Original strand, 38957402 - 38957499
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||||| ||||||||| ||| ||||||||| || ||| | |||||   | ||||  ||| |||| |||||| |||||||||||||| ||||||||    
T  38957402 aagagcaatgatatttgtatatctatttaatgataactttagcgataatcatatttttttctctttttattggtcaaaaataatggagaaagaaaagg 38957499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 1208120 - 1208025
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||||||||||| || ||| ||| |||||||| ||||||| ||| |||| || | |||  ||||||| ||||||| ||||||| |||| |||||    
T  1208120 atatttgtacatccaattgatgtcaactttggtgacaactttgattttctctcttcttattaataaaaaacaatggag-gagaaaaaggaaaagaga 1208025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 1765515 - 1765483
Alignment:
Q  200 ttttgattggtaaaaaataatggagagagaaaa 232  Q
    |||| ||||||||||||||||||||||||||||    
T  1765515 ttttcattggtaaaaaataatggagagagaaaa 1765483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 11173636 - 11173529
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||| ||||||||||| ||| |||||| || |||| ||| |||| |||||  |||| |||| |||| |||||| ||||| ||||  ||||||||| |    
T  11173636 aaaagagtaataatatttgaacaaccatttgat-acaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaatgttgagagaaaaag 11173538  T
Q  235 gaatagaga 243  Q
    ||| |||||    
T  11173537 gaagagaga 11173529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 20080082 - 20080122
Alignment:
Q  148 tatttgtacatccatttaatgacaattttggtgataacttt 188  Q
    |||||| |||||||||||||||||||||| |||| ||||||    
T  20080082 tatttgaacatccatttaatgacaatttttgtgacaacttt 20080122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 23183606 - 23183686
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaata 218  Q
    |||| ||| ||||||||||||||||||||||| || |||||||| || |||   || ||||| ||| |||||| |||||||    
T  23183606 agagaaatgatatttgtacatccatttaatgataactttggtgacaattttaaatttctctagttttattggtcaaaaata 23183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 33007515 - 33007439
Alignment:
Q  168 gacaattttggtgataactt-tgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||||| |||| ||||| | |||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  33007515 gacaatttttgtgacaacttctttttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 33007439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 42864202 - 42864246
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtga 181  Q
    ||||||||| ||||||||||||| || ||||||||| ||||||||    
T  42864202 aagagcaatgatatttgtacatctatctaatgacaactttggtga 42864246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 49131028 - 49130933
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||| |||||||||| | ||||||||| |||| |||||  |||  |||| |||| ||| || ||||| ||||||||||||||| |||| |||||    
T  49131028 atatttgaacatccatttga-gacaatttttgtgacaacttcttttctctctcttttcattagtcaaaaacaatggagagagaaaaaggaagagaga 49130933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 52678521 - 52678557
Alignment:
Q  179 tgataactttgttttcctctattttgattggtaaaaa 215  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  52678521 tgataactttgtttttctctattttgattggttaaaa 52678557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 11645950 - 11645873
Alignment:
Q  61 atcaacataaatttttatcaatcaattaagctaaatagtcaaactaaaacaatatgaaatgtgagcagcaattgaaaa 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11645950 atcaacataaatttttatcaatcaattaagctaaatagtcaaactaaaacaatatgaaatgtgagcagcaattgaaaa 11645873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 4550517 - 4550398
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||| ||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||| ||||| ||||||||||||||| ||||     
T  4550517 gagcaatgatatttatacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtcaaaaacaatggagagagaaaaaggaag 4550418  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||||||||||||    
T  4550417 agagaggataataacatcat 4550398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 137 - 258
Target Start/End: Original strand, 51224724 - 51224845
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||||| |||||||||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||| ||||| |||| |||||||||| | |    
T  51224724 aagagcaatgatatttgtacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtcaaaaacaatgaagagagaaaaagaa 51224823  T
Q  237 atagagaagataataacatcat 258  Q
    | ||||| ||||||||||||||    
T  51224824 agagagaggataataacatcat 51224845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 56025441 - 56025320
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||| ||||||| ||| |||| ||||||||||| ||||| ||||||||||||||| |||    
T  56025441 aagagcaatgatatttgtacattcatttaatgacaactttggtgacaactttgattttctctcttttgattggtcaaaaacaatggagagagaaaaagga 56025342  T
Q  237 atagagaagataataacatcat 258  Q
    | ||||| ||||| ||||||||    
T  56025341 acagagaggataacaacatcat 56025320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 138 - 249
Target Start/End: Original strand, 8026651 - 8026762
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| |||||||||||||||||  ||||||| ||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| ||||    
T  8026651 agagcaatgatatttgtacatccattccatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaa 8026750  T
Q  238 tagagaagataa 249  Q
     ||||| |||||    
T  8026751 gagagaggataa 8026762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 249
Target Start/End: Original strand, 55642501 - 55642603
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 246  Q
    ||||||||||||||| ||||||| || |||||||| ||| ||| |||  ||| |||| |||||||||||||||||||||||||||| |||| ||||| ||    
T  55642501 atatttgtacatccaattaatgataactttggtgacaaccttgcttttatctctttttattggtaaaaaataatggagagagaaaaaggaagagagagga 55642600  T
Q  247 taa 249  Q
    |||    
T  55642601 taa 55642603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 249
Target Start/End: Original strand, 5208212 - 5208325
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 235  Q
    |||||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| ||    
T  5208212 aaagagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagg 5208311  T
Q  236 aatagagaagataa 249  Q
    || ||||| |||||    
T  5208312 aagagagaggataa 5208325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 1796547 - 1796430
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||  ||||||| ||| |||| | ||||||||| |||| || | |||||| ||||||||||||||||||||| ||||     
T  1796547 gagcaatgatatttgtacatccattccatgacaactttagtgaca-ctttgtttttctctcttcttattggtcaaaaataatggagagagaaaaaggaag 1796449  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| ||||||||    
T  1796448 agagaggataa-aacatcat 1796430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 24019859 - 24019973
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatg--gagagagaaaaggga 236  Q
    ||||||| ||||||||||||| |||||||||||| |||||||| ||| ||||||  |||| ||||||||||| ||||| | ||  ||||||||||| |||    
T  24019859 gagcaatgatatttgtacatctatttaatgacaactttggtgacaaccttgtttctctctcttttgattggtcaaaaacattggagagagagaaaaagga 24019958  T
Q  237 atagagaagataata 251  Q
    | ||||| |||||||    
T  24019959 agagagaggataata 24019973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 27001297 - 27001416
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  27001297 gagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaag 27001396  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| | ||||||    
T  27001397 agagaggataagaccatcat 27001416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 47106094 - 47105968
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| | ||     
T  47106094 gagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaag 47105995  T
Q  239 agagaagataataacatcatctgtgta 265  Q
    ||||| ||||| | |||||| ||||||    
T  47105994 agagaggataagaccatcatgtgtgta 47105968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 232
Target Start/End: Complemental strand, 9032963 - 9032870
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||| |||||||||||||||||| || |||| ||| |||| ||| ||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  9032963 gagcaatgatatttgtacatccatttcattacaactttagtgacaaccttgtttttctctttttttattggtcaaaaacaatggagagagaaaa 9032870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 37022446 - 37022325
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    |||||| || |||||||||||||||||| ||||||| ||| |||||||  ||||||| || | |||| |||||| ||||| |||||||||| |||| |||    
T  37022446 aagagcgatgatatttgtacatccatttcatgacaactttagtgataatcttgtttttctttttttttattggtcaaaaacaatggagagataaaaagga 37022347  T
Q  237 atagagaagataataacatcat 258  Q
    | ||||| ||||| | ||||||    
T  37022346 agagagatgataagaccatcat 37022325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 258
Target Start/End: Complemental strand, 43434514 - 43434404
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 235  Q
    |||||||||| ||||||||||||||||||||||||||            |||||||||||| | ||||||||||| ||||| |||||| |||||||| ||    
T  43434514 aaagagcaatgatatttgtacatccatttaatgacaa------------ctttgttttcctatcttttgattggtcaaaaacaatggacagagaaaaagg 43434427  T
Q  236 aatagagaagataataacatcat 258  Q
    || |||||| |||||||||||||    
T  43434426 aagagagaaaataataacatcat 43434404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 258
Target Start/End: Original strand, 44368088 - 44368209
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||||| |||||||||||||||||| ||||||| ||| |||| ||| || |||| |||| || | ||| || ||||| ||||||||||||||| |||    
T  44368088 aagagcaatgatatttgtacatccatttcatgacaactttagtgacaaccttatttttctctcttcttatttgtcaaaaacaatggagagagaaaaagga 44368187  T
Q  237 atagagaagataataacatcat 258  Q
    | ||||| ||||| | ||||||    
T  44368188 agagagatgataagaccatcat 44368209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 258
Target Start/End: Original strand, 51377179 - 51377300
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||||| |||||||||||||||||   |||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||    
T  51377179 aagagcaatgatatttgtacatccattccttgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagga 51377278  T
Q  237 atagagaagataataacatcat 258  Q
    | ||||| ||||| | ||||||    
T  51377279 agagagaggataagaccatcat 51377300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 24235503 - 24235393
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||| ||||||| ||| |||| || |||  ||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  24235503 gagcaatgatatttgtacatccatttcatgacaactttagtgacaattttaattttctctcttcttattggtcaaaaacaatggagagagaaaaaggaag 24235404  T
Q  239 agagaagataa 249  Q
    ||||| |||||    
T  24235403 agagaggataa 24235393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 31221596 - 31221486
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||||||||| |||  ||||||||||| |||| ||  ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  31221596 gagcaatgatatttgtacatcaattccatgacaattttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaag 31221497  T
Q  239 agagaagataa 249  Q
    ||||| |||||    
T  31221496 agagaggataa 31221486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 46844145 - 46844239
Alignment:
Q  155 acatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 249  Q
    ||||| |||||| ||||| |||||||| ||||||||||| |||| |||| |||||| ||||| |||||||||||||||  ||| |||||| ||||    
T  46844145 acatctatttaaggacaactttggtgacaactttgtttttctctctttttattggttaaaaacaatggagagagaaaaaagaagagagaaaataa 46844239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 32901504 - 32901419
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||||| || |||| ||||||||||| ||  ||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  32901504 atatttgtacatccaattgatgataattttggtgacaatcttgtttttctctctttttattggtcaaaaacaatggagagagaaaa 32901419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 36728526 - 36728603
Alignment:
Q  155 acatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||| || ||||||| |||||||| ||||||||||| |||| || | |||||||||||| |||||||||||||||    
T  36728526 acatccaattgatgacaactttggtgacaactttgtttttctctcttcttattggtaaaaaacaatggagagagaaaa 36728603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 249
Target Start/End: Original strand, 7037370 - 7037482
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||||| ||||||||||||| |||  ||||||| ||| | || ||| ||||||| |||  || | |||||| ||||| ||||||||||||||| |||    
T  7037370 aagagcaattatatttgtacatctattccatgacaactttagggacaaccttgtttttctcccttcttattggtcaaaaacaatggagagagaaaaagga 7037469  T
Q  237 atagagaagataa 249  Q
    | |||||||||||    
T  7037470 agagagaagataa 7037482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 41495188 - 41495092
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||||| ||| | || |||| ||||||||||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||||    
T  41495188 atatttgtatatctaattgatgataattttggtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagaga 41495092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 45548671 - 45548791
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| ||||||||||||| || ||||||||| ||| ||||  || |||||||  |||||||| ||||||  |||| ||| |||||| |||| ||||    
T  45548671 agagcaatgatatttgtacatctatctaatgacaactttagtgacgaccttgtttttttctatttttattggttgaaaacaatagagagacaaaaaggaa 45548770  T
Q  238 tagagaagataataacatcat 258  Q
     ||||| |||||| |||||||    
T  45548771 gagagaggataatgacatcat 45548791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 53384227 - 53384318
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagag 228  Q
    ||||||||||||||||||||||||||||| |||| || ||| |||| || |||||||| |||| || | |||||| ||||| |||||||||||    
T  53384227 aaagagcaataatatttgtacatccattttatgataactttagtgacaa-tttgtttttctctcttcttattggtcaaaaacaatggagagag 53384318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 243
Target Start/End: Complemental strand, 3223175 - 3223068
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 235  Q
    |||||||||| |||||||||||||||||  |||| || ||| |||| ||| || |||| |||| || | |||||| ||||| ||||||||||||||| ||    
T  3223175 aaagagcaatgatatttgtacatccattccatgaaaactttagtgacaaccttctttttctctcttcttattggtcaaaaacaatggagagagaaaaagg 3223076  T
Q  236 aatagaga 243  Q
    || |||||    
T  3223075 aagagaga 3223068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 54165091 - 54165168
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga--atagagaagataataacatcat 258  Q
    |||||||||||||||| ||||||||||| ||||| |||| |||||||||| |||  | ||||| ||||||||||||||    
T  54165091 aactttgttttcctctcttttgattggtcaaaaacaatgaagagagaaaaaggaagagagagaggataataacatcat 54165168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 15638305 - 15638220
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||||||| |||| || | |||||  ||||| |||||||||||||||    
T  15638305 atatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggacaaaaacaatggagagagaaaa 15638220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 5466427 - 5466499
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 255  Q
    |||||| ||||| |||||||  |||||| ||||||||| ||||||||||| ||||||||||| |||| |||||    
T  5466427 aactttattttcttctatttctattggttaaaaataatagagagagaaaaaggaatagagaaaataaaaacat 5466499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 20632544 - 20632628
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaa 231  Q
    ||||||||||||||| || |||||||||||||||| |||||| ||||  ||| ||   |||||| ||||| ||||||||||||||    
T  20632544 atatttgtacatccaattgatgacaattttggtgacaactttatttttttctcttcctattggtcaaaaacaatggagagagaaa 20632628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 31049061 - 31048952
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||||| ||||||||||||||||||||||||||            ||||||||| |||| ||||||||| | ||||| ||||||||||||||| | |    
T  31049061 aagagcaatgatatttgtacatccatttaatgacaa------------ctttgtttttctctcttttgattgatcaaaaacaatggagagagaaaaagaa 31048974  T
Q  237 atagagaagataataacatcat 258  Q
    | ||||| |||||||| |||||    
T  31048973 agagagaggataataatatcat 31048952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 49424708 - 49424812
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||  |||| ||||||| ||||  ||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  49424708 gagcaatgatattttgacattcatttaaggacagctttagtgacaactttgtttttctcttttcttattggttaaaaacaatggagagagaaaaaggaag 49424807  T
Q  239 agaga 243  Q
    |||||    
T  49424808 agaga 49424812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 55267888 - 55268008
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| ||||||||||| | |||  || |||| ||| |||||||| ||||||| |||| || | |||||| ||||  ||||||||||||||| ||||    
T  55267888 agagcaatgatatttgtacacctattccataacaactttagtgataaccttgtttttctctcttcttattggtcaaaagcaatggagagagaaaaaggaa 55267987  T
Q  238 tagagaagataataacatcat 258  Q
     ||||| ||||| | ||||||    
T  55267988 gagagaggataagatcatcat 55268008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 29406972 - 29407023
Alignment:
Q  186 tttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||| ||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  29406972 tttggttttctctattttgattggtaaaaaataatagagagagaaaaaggaa 29407023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 40721900 - 40721971
Alignment:
Q  187 ttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 258  Q
    ||||||| |||| |||| |||||| ||||||||||||||||||||| |||| ||||| || || ||||||||    
T  40721900 ttgtttttctctttttttattggtcaaaaataatggagagagaaaaaggaagagagaggaaaagaacatcat 40721971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 258
Target Start/End: Original strand, 42177934 - 42178057
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||||| | ||||||||| || || || |||| || |||||| | ||||||||||| |||| || | |||||| ||||||||| |||| |||||| |    
T  42177934 aaaagagcagtgatatttgtatattcaattgatgataactttggtaacaactttgtttttctctcttcttattggttaaaaataatagagatagaaaaag 42178033  T
Q  235 gaatagagaagataataacatcat 258  Q
    ||| |||||| |||| || |||||    
T  42178034 gaaaagagaaaataaaaatatcat 42178057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 258
Target Start/End: Original strand, 45779186 - 45779298
Alignment:
Q  134 gaaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaag 233  Q
    |||||||||||| ||||||||||||| |||||||||||||||||            |||  |||| ||||||||||| ||||| |||||||||||||||     
T  45779186 gaaaagagcaatgatatttgtacatctatttaatgacaattttg------------tttctctctcttttgattggtcaaaaacaatggagagagaaaaa 45779273  T
Q  234 ggaatagagaagataataacatcat 258  Q
    | || |||||  |||||||||||||    
T  45779274 gaaagagagagaataataacatcat 45779298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 610982 - 610896
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataa-ctttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||| || ||| ||||||||| |||||||| || |||  ||||  ||| |||| ||||||||||||||||||||||||||||    
T  610982 atatttgtatattcatctaatgacaactttggtgacaatcttattttttttctctttttattggtaaaaaataatggagagagaaaa 610896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 230
Target Start/End: Original strand, 4971898 - 4971992
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaa 230  Q
    |||||||||| ||||||||| ||  ||||||||| ||||||  ||||||||||||||| |  | ||||||||||| ||||| |||| | ||||||    
T  4971898 aaagagcaatgatatttgtatatgtatttaatgataattttaatgataactttgtttttcatttttttgattggtcaaaaacaatgaaaagagaa 4971992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 45923515 - 45923446
Alignment:
Q  185 ctttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 255  Q
    |||||||||||| | ||||||||||| ||||||||||||||||||||| | || |||||  ||||||||||    
T  45923515 ctttgttttccttt-ttttgattggtcaaaaataatggagagagaaaaagaaagagagagaataataacat 45923446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 52669498 - 52669616
Alignment:
Q  140 agcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaata 239  Q
    |||||| |||||||||||||||||| ||||| | ||| |||| ||  ||||||| |||| |||| |||||| | ||| |||||| || ||||| |||| |    
T  52669498 agcaatgatatttgtacatccattttatgaccactttagtgacaatcttgtttttctctctttttattggtcagaaacaatggaaagggaaaaaggaaga 52669597  T
Q  240 gagaagataataacatcat 258  Q
     ||||||||| | ||||||    
T  52669598 tagaagataagaccatcat 52669616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 53662330 - 53662420
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 229  Q
    ||||||| |||| ||||||||||||| ||||||| ||| ||||||| |||||||| |||| || | ||| || ||||| |||| |||||||    
T  53662330 gagcaatgatatatgtacatccatttcatgacaactttagtgataattttgtttttctctcttcttattagtcaaaaacaatgaagagaga 53662420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 2193705 - 2193790
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||||| || ||||||| |||| ||| ||  ||||||| |||| || | |||||| ||||| |||||||||||||||    
T  2193705 atatttgtacatccaattgatgacaactttgatgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 2193790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 19910994 - 19910889
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||| ||| ||||||| |||| ||||| |||| || |||| |||| |  || |||| || |||||| |||||| ||||||||||||||||||||| ||||    
T  19910994 agagtaatgatatttggacattcatttgatgataactttgttgattatcttatttttctttatttttattggtcaaaaataatggagagagaaaaaggaa 19910895  T
Q  238 tagaga 243  Q
     |||||    
T  19910894 gagaga 19910889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 32365563 - 32365648
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||| |||||||| |||| |||| || |||| ||||||| || |||| |||| |||| |||||| ||||| |||||||||||||||    
T  32365563 atatatgtacatctattttatgataactttgatgataacattatttttctctctttttattggtcaaaaacaatggagagagaaaa 32365648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 36513028 - 36512932
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||| ||||||| | |||||||| | ||||||| | |||| |||||  |||  |||| |||| |||||||||||| |||||||||||||||    
T  36513028 aaaagagcaatgatatttgaaaatccatttga-gacaattcttgtgacaacttcttttctctctctttttattggtaaaaaacaatggagagagaaaa 36512932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 35580254 - 35580202
Alignment:
Q  178 gtgataactttgttttcctctattttgattggtaaaaaataatggagagagaa 230  Q
    |||| |||||| ||||||||| |||| |||||| |||||||||||||||||||    
T  35580254 gtgacaacttttttttcctctcttttcattggtcaaaaataatggagagagaa 35580202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 45176665 - 45176709
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagaga 227  Q
    |||||||||||||||| ||||||||||| ||||| ||||||||||    
T  45176665 aactttgttttcctctcttttgattggtcaaaaacaatggagaga 45176709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 20956514 - 20956589
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 258  Q
    ||||||||||| |||| ||||||||||| ||||| |||| |||||||||| | || ||| |  |||||||||||||    
T  20956514 aactttgtttttctctcttttgattggtcaaaaacaatgaagagagaaaaagaaagagaaagaataataacatcat 20956589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 43358766 - 43358703
Alignment:
Q  169 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||  ||| ||||||||||| |||||||||||||||| ||||  ||| |||||||||||    
T  43358766 acaatttttatgacaactttgtttttctctattttgattggtcaaaatcaatagagagagaaaa 43358703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 44170559 - 44170626
Alignment:
Q  191 tttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 258  Q
    |||||||| ||||||||| | ||||| ||| || |||||||| |||| ||||| ||||||||||||||    
T  44170559 tttcctctcttttgattgatcaaaaacaattgacagagaaaaaggaagagagaggataataacatcat 44170626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 9162219 - 9162145
Alignment:
Q  169 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||||||| |||| |||||  |||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  9162219 acaatttttgtgacaacttcttttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 9162145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 232
Target Start/End: Original strand, 33483993 - 33484087
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||| ||| ||||||||||||||| || ||||||| |||||||| ||| ||  ||| |||| || | |||| | ||||| |||||||||||||||    
T  33483993 agagtaatgatatttgtacatccaattgatgacaactttggtgacaaccttacttttctctcttcttattgatcaaaaacaatggagagagaaaa 33484087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 232
Target Start/End: Original strand, 47519607 - 47519701
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||||| | ||||||||||||||||| ||||| || || | ||| ||| ||||||| || | || | ||| || |||||||||||||||||||||    
T  47519607 agagcagtgatatttgtacatccattgaatgataacttagttgacaaccttgtttttctttcttcttattagttaaaaataatggagagagaaaa 47519701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 172
Target Start/End: Original strand, 54165058 - 54165092
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaa 172  Q
    |||||||| ||||||||||||||||||||||||||    
T  54165058 agagcaatgatatttgtacatccatttaatgacaa 54165092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 176
Target Start/End: Complemental strand, 439327 - 439294
Alignment:
Q  143 aataatatttgtacatccatttaatgacaatttt 176  Q
    ||||||||||| ||||||||||||||||||||||    
T  439327 aataatatttgaacatccatttaatgacaatttt 439294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 1562468 - 1562517
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||| ||| |||| ||||||||||| ||||||||| |||||||||||    
T  1562468 aactttggttttctcttttttgattggtcaaaaataatagagagagaaaa 1562517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 12694316 - 12694361
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataa 184  Q
    ||||||| ||||||||| ||| || |||||||||||||||||||||    
T  12694316 gagcaatgatatttgtatatctatctaatgacaattttggtgataa 12694361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 13182515 - 13182426
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagaga 227  Q
    |||| ||| ||||||||||||| | || ||||||| |||| ||||||  ||||||| |||| |||| |||||| ||||| ||| ||||||    
T  13182515 agagtaatgatatttgtacatcaaattgatgacaactttgatgataatcttgtttttctctttttttattggttaaaaacaatagagaga 13182426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 13267375 - 13267459
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||| ||| |||| || |||| |||| ||| ||||||||||| |||| || | |||||| ||||| |||||||||||||||    
T  13267375 atatttgtaaatcgatttcat-acaactttgatgaaaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 13267459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 18568711 - 18568796
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||| ||| || | || | |||||| ||||| |||| ||||||||||    
T  18568711 atatttgtacatccaattgatgacaactttggtgacaaccttgcttttctatcttcttattggtcaaaaacaatgaagagagaaaa 18568796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 20056557 - 20056472
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||||| || ||||||| |||||||| ||  ||| ||| |||| || | |||||| ||||| ||| |||||||||||    
T  20056557 atatttgtacatccaattgatgacaactttggtgacaatcttgcttttctctcttcttattggtcaaaaacaattgagagagaaaa 20056472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 230
Target Start/End: Complemental strand, 24154794 - 24154704
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaa 230  Q
    |||||||  ||||||||||||| ||||||||| ||||||| ||| |||| | ||||  ||| ||||  ||||| ||||| |||||||||||||    
T  24154794 agagcaacgatatttgtacatctatttaatgataattttgatgacaactatatttt--tctttttttgttggtcaaaaacaatggagagagaa 24154704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 36812335 - 36812384
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||| |||||||||||||||| ||||  ||| |||||||||||    
T  36812335 aactttgtttttctctattttgattggtcaaaatcaatagagagagaaaa 36812384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 39844197 - 39844250
Alignment:
Q  190 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||| |||| |||| |||||| ||||| ||||||||||||||| ||||||||||    
T  39844197 tttttctctctttttattggtcaaaaacaatggagagagaaaaaggaatagaga 39844250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 39880962 - 39881011
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||| ||| |||| ||||||||||| ||||||||| |||||||||||    
T  39880962 aactttggttttctctcttttgattggtcaaaaataatagagagagaaaa 39881011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 45923550 - 45923517
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgaca 171  Q
    |||||||| |||||||||||||||||||||||||    
T  45923550 agagcaatgatatttgtacatccatttaatgaca 45923517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 48743849 - 48743800
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||| |||||||||||||||| ||||  ||| |||||||||||    
T  48743849 aactttgtttttctctattttgattggtcaaaatcaatagagagagaaaa 48743800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 8681116 - 8681020
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||| |||   || || | |||| | ||||| ||||||||||||||| |||| |||||    
T  8681116 atatttgtacatccaattgatgacaactttggtgacaaccttgctttttcctcttcttattgatcaaaaacaatggagagagaaaaaggaagagaga 8681020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 12241196 - 12241137
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||||| |||| |||| |||||||||||| |||||||| ||||||||||| |||| |||||    
T  12241196 aactttatttttctctcttttgattggta-aaaataatagagagagaaaaaggaaaagaga 12241137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 19246031 - 19245967
Alignment:
Q  179 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||||||||  ||||||||| |||  |||||| |||||||||||| |||||||| |||| |||||    
T  19246031 tgataacttccttttcctctctttctattggtcaaaaataatggaaagagaaaaaggaagagaga 19245967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 29949596 - 29949680
Alignment:
Q  174 tttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 258  Q
    |||| ||| |||||| |||| |||| || | |||||||||||| ||| || |||||||| |||| ||||| ||||| ||||||||    
T  29949596 tttgatgacaactttctttttctctcttcttattggtaaaaaacaatagatagagaaaaaggaagagagaggataagaacatcat 29949680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 30866533 - 30866445
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagaga 227  Q
    ||||||| ||||||| | ||||||||||||| || |||||||| || |||  ||| |||| |||| ||| || ||||||||| ||||||    
T  30866533 gagcaatgatatttggatatccatttaatgataactttggtgacaattttagttttctctctttttattagtcaaaaataatagagaga 30866445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 31413704 - 31413772
Alignment:
Q  169 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||| ||| |||| ||| ||||| | |||| |||| |||||| ||||||||||||||||||||| ||||    
T  31413704 acaagttttgtgacaaccttgttgtgctctctttttattggtcaaaaataatggagagagaaaaaggaa 31413772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 33820269 - 33820328
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||||| |||| |||| ||||||||||| ||||||||| ||||||||||| |||| |||||    
T  33820269 aactttatttttctctcttttgattggt-aaaaataatagagagagaaaaaggaaaagaga 33820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 36792481 - 36792417
Alignment:
Q  173 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    ||||||||| |||||  |||  |||| |||| |||||| ||||||||||||||||||||| ||||    
T  36792481 ttttggtgacaacttcttttctctctcttttcattggttaaaaataatggagagagaaaaaggaa 36792417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 38952842 - 38952774
Alignment:
Q  169 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| ||||||| ||  |||| |||| |||| |||||| ||||| ||||||||||||||| ||||    
T  38952842 acaatttttgtgataatttcttttttctcttttttcattggtcaaaaacaatggagagagaaaaaggaa 38952774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 40756060 - 40756000
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||| ||| ||||  |||||||||| ||||||||| ||||||||||| |||| |||||    
T  40756060 aactttgattttctcttctttgattggtcaaaaataatagagagagaaaaaggaagagaga 40756000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 41119458 - 41119506
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaa 231  Q
    |||||| ||||||||| |||| |||||| ||||| ||||||||||||||    
T  41119458 aacttttttttcctctcttttcattggtcaaaaacaatggagagagaaa 41119506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 46173659 - 46173615
Alignment:
Q  200 ttttgattggtaaaaaataatggagagagaaaagggaatagagaa 244  Q
    |||| |||||||||||| ||||||||||||||| |||| ||||||    
T  46173659 ttttcattggtaaaaaacaatggagagagaaaaaggaagagagaa 46173615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 7077227 - 7077347
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||| ||||     
T  7077227 gagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgtttttctctcttttgattggtcaaaaataatggagagagaaaaaggaag 7077326  T
Q  239 agagaagataataacatcatc 259  Q
    || || ||||| |||||||||    
T  7077327 agtgaggataacaacatcatc 7077347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 258
Target Start/End: Original strand, 30574261 - 30574384
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||||||| |||||||||||||||||  ||||||||||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| |    
T  30574261 aaaagagcaatgatatttgtacatccattccatgacaattttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaag 30574360  T
Q  235 gaatagagaagataataacatcat 258  Q
    ||| ||||| ||||| | ||||||    
T  30574361 gaagagagatgataagaccatcat 30574384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 258
Target Start/End: Original strand, 36548265 - 36548387
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 235  Q
    |||||||||| |||||||||||||||| ||||||||| |||| ||| ||| ||||||| ||||||||| |||| |  |||| ||||||||||||||| ||    
T  36548265 aaagagcaatgatatttgtacatccatctaatgacaactttgatgacaaccttgtttttctctatttttattgattgaaaacaatggagagagaaaaagg 36548364  T
Q  236 aatagagaagataataacatcat 258  Q
    || ||||| ||||||| ||||||    
T  36548365 aagagagaggataatagcatcat 36548387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 19272044 - 19271923
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||||| ||||||||||||| |||  ||||||||||| |||||||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||    
T  19272044 aagagcaatgatatttgtacatctattatatgacaattttagtgataactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagga 19271945  T
Q  237 atagagaagataataacatcat 258  Q
    | ||| | ||||| ||||||||    
T  19271944 agagaaaggataagaacatcat 19271923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 26685874 - 26685755
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||||||||| ||||||||| || |||||| | || ||||||||||||| ||||||| | | ||||| |||| | |||||||| ||||     
T  26685874 gagcaatgatatttgtacatctatttaatgataactttggtcacaattttgttttcctctcttttgatcgattaaaaacaatgaaaagagaaaaaggaag 26685775  T
Q  239 agagaagataataacatcat 258  Q
    ||||||||||||||||||||    
T  26685774 agagaagataataacatcat 26685755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 26955605 - 26955486
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||||||||| ||||||||| || |||||| | || ||||||||||||| ||||||| | | ||||| |||| | |||||||| ||||     
T  26955605 gagcaatgatatttgtacatctatttaatgataactttggtcacaattttgttttcctctcttttgatcgattaaaaacaatgaaaagagaaaaaggaag 26955506  T
Q  239 agagaagataataacatcat 258  Q
    ||||||||||||||||||||    
T  26955505 agagaagataataacatcat 26955486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 134 - 258
Target Start/End: Complemental strand, 12512981 - 12512857
Alignment:
Q  134 gaaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaag 233  Q
    |||||||||||| |||||||||||||||||  ||||||| ||| |||| ||  ||||||| |||| || | |||||| ||||| |||||||||||||||     
T  12512981 gaaaagagcaatgatatttgtacatccattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaa 12512882  T
Q  234 ggaatagagaagataataacatcat 258  Q
    |||| ||||| ||||| | ||||||    
T  12512881 ggaagagagaggataagaccatcat 12512857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 142 - 258
Target Start/End: Complemental strand, 32634888 - 32634772
Alignment:
Q  142 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 241  Q
    |||| |||||||||||||||||  ||||||||||| ||||||| |||||||| |||| || | |||||||||||| | |||||||||||||  ||| |||    
T  32634888 caatgatatttgtacatccattccatgacaattttagtgataattttgtttttctcttttcttattggtaaaaaacattggagagagaaaaatgaaaaga 32634789  T
Q  242 gaagataataacatcat 258  Q
    || ||||| | ||||||    
T  32634788 gaggataagaccatcat 32634772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 3263396 - 3263515
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||||||||||||||||||| | ||     
T  3263396 gagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaataatggagagagaaaaagaaag 3263495  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| | ||||||    
T  3263496 agagaggataagaccatcat 3263515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 15622227 - 15622108
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  15622227 gagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaag 15622128  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| | ||||||    
T  15622127 agagaggataagaccatcat 15622108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 258
Target Start/End: Complemental strand, 38011059 - 38010936
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||||||| ||||||||||||| |||  ||||||||||| |||| || ||||||||  ||| || | |||||| ||||| ||||||||||||||| |    
T  38011059 aaaagagcaatgatatttgtacatctattccatgacaattttagtgacaattttgtttttttctcttcttattggtcaaaaacaatggagagagaaaaag 38010960  T
Q  235 gaatagagaagataataacatcat 258  Q
    ||| ||||| ||||| | ||||||    
T  38010959 gaagagagaggataagaccatcat 38010936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 249
Target Start/End: Original strand, 11464008 - 11464121
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 235  Q
    |||||||||| |||||||||||||||||  || |||| ||| |||| ||| ||||||| |||| |||| |||||| ||||| |||||||||||||||  |    
T  11464008 aaagagcaatgatatttgtacatccattccataacaactttagtgacaaccttgtttttctctctttttattggtcaaaaacaatggagagagaaaaatg 11464107  T
Q  236 aatagagaagataa 249  Q
    || ||||| |||||    
T  11464108 aagagagatgataa 11464121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 12417811 - 12417690
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||||| ||||||||||||| |||| | ||||| |||||||| |||||||| || |||| || |  ||||| ||||| |||||||||||||||  ||    
T  12417811 aagagcaatgatatttgtacatctatttcacgacaactttggtgacaactttgtgtttctctcttctttttggttaaaaacaatggagagagaaaaatga 12417712  T
Q  237 atagagaagataataacatcat 258  Q
    ||| ||| ||||| ||||||||    
T  12417711 atacagaggataacaacatcat 12417690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 31006196 - 31006123
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 258  Q
    |||||||||||||||||||||||||||| ||||||||||   |||||||| |||| ||||| ||||||||||||||    
T  31006196 aactttgttttcctctattttgattggtcaaaaataatg--aagagaaaaaggaagagagaggataataacatcat 31006123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 137 - 232
Target Start/End: Complemental strand, 30776804 - 30776709
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||| ||||||||||||  |||| ||||||| ||| |||| || |||||||  |||| |||| ||||||||||||||||||||||| ||||    
T  30776804 aagagcaatgatatttgtacatttatttcatgacaaatttagtgacaaatttgtttctctctctttttattggtaaaaaataatggagagaaaaaa 30776709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 136 - 258
Target Start/End: Complemental strand, 35972756 - 35972638
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 235  Q
    |||||||||| ||||||||||||| ||||| ||| ||||||||||| ||| || |||| |||| |||| |||| | ||||||||||||||||||||| |     
T  35972756 aaagagcaatcatatttgtacatcaatttattgataattttggtgacaaccttatttt-ctctctttttattgat-aaaaataatggagagagaaaaagc 35972659  T
Q  236 aatagagaagataataacatcat 258  Q
    || |||||  |||||||||||||    
T  35972658 aagagaga--ataataacatcat 35972638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 232
Target Start/End: Complemental strand, 4292967 - 4292873
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||| ||| ||||||| |||| ||||| |||||||||||| ||| ||||||||||| ||||||| | |||||| ||||| || ||||||||||||    
T  4292967 agagtaatgatatttggacattcatttgatgacaattttgttgacaactttgtttttctctattcttattggtcaaaaacaacggagagagaaaa 4292873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 249
Target Start/End: Original strand, 3154528 - 3154641
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 235  Q
    |||||| ||| ||||||||||||  | || |||||||||||||||| |||||| |||| |||| |||| ||| || ||||| |||||||||||||||  |    
T  3154528 aaagagtaatgatatttgtacatttaattgatgacaattttggtgacaactttatttttctctctttttattagttaaaaaaaatggagagagaaaaatg 3154627  T
Q  236 aatagagaagataa 249  Q
    || ||||| |||||    
T  3154628 aagagagatgataa 3154641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 8959335 - 8959250
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||||| || ||||||| ||||| || ||| ||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  8959335 atatttgtacatccaattgatgacaactttggcgacaaccttgtttttctctctttttattggtcaaaaacaatggagagagaaaa 8959250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 258
Target Start/End: Complemental strand, 9594667 - 9594542
Alignment:
Q  133 tgaaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||| |||||||||||||||||  ||||||| ||| |||| ||| || |||  |||| || | |||||| ||||| |||||||||||||||    
T  9594667 tgaaaagagcaatgatatttgtacatccattccatgacaactttagtgacaaccttatttctctctcttcttattggtcaaaaacaatggagagagaaaa 9594568  T
Q  233 gggaatagagaagataataacatcat 258  Q
     | || ||||| ||||| | ||||||    
T  9594567 agaaagagagaggataagaccatcat 9594542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 28501777 - 28501681
Alignment:
Q  162 tttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 258  Q
    |||| |||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||||||| ||||| ||||| ||||||||    
T  28501777 tttagtgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaagggaagagagatgataagaacatcat 28501681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 258
Target Start/End: Original strand, 33823585 - 33823701
Alignment:
Q  142 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 241  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| | || |||    
T  33823585 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaagaga 33823684  T
Q  242 gaagataataacatcat 258  Q
    || ||||| | ||||||    
T  33823685 gaggataagaccatcat 33823701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 9596702 - 9596821
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||| ||||  ||||||| ||| |||| ||  ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  9596702 gagcaatgatatttgtacattcattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaag 9596801  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| | ||||||    
T  9596802 agagaggataagaccatcat 9596821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 41192726 - 41192651
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 258  Q
    ||||||||||| |||| ||||||||||| ||||| ||||||||||||||| |||| || || ||||| ||||||||    
T  41192726 aactttgtttttctctcttttgattggtcaaaaacaatggagagagaaaaaggaagagtgaggataacaacatcat 41192651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 258
Target Start/End: Original strand, 22920377 - 22920499
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 235  Q
    ||||||| || ||||||||||||| |||  ||||||| | | |||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||  |    
T  22920377 aaagagcgatgatatttgtacatctattacatgacaactatagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaatg 22920476  T
Q  236 aatagagaagataataacatcat 258  Q
    || ||||| ||||| ||||||||    
T  22920477 aagagagatgataagaacatcat 22920499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 17489523 - 17489438
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||||| || ||||||| |||||||| ||  ||||||| |||| || | |||||| ||||| |||||||||||||||    
T  17489523 atatttgtacatccaattgatgacaactttggtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 17489438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 4954649 - 4954530
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||| ||||||||||  || |||| ||| |||| ||| ||||||| |||| || | || ||| ||||| ||||||||||||||| ||||     
T  4954649 gagcaatgatatttctacatccattctataacaactttagtgacaaccttgtttttctctcttcttatgggtcaaaaacaatggagagagaaaaaggaag 4954550  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| | ||||||    
T  4954549 agagaggataagaccatcat 4954530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 10522958 - 10522848
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||||| || ||||  || | || ||| |||| ||| ||||||| |||| || | |||||| ||||||||||||||||||||| ||||     
T  10522958 gagcaatgatatttgtatattcattccataataactttagtgacaaccttgtttttctctcttcttattggtcaaaaataatggagagagaaaaaggaag 10522859  T
Q  239 agagaagataa 249  Q
    ||||| |||||    
T  10522858 agagaggataa 10522848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 34381163 - 34381091
Alignment:
Q  171 aattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||||| |||| ||||| ||||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  34381163 aatttttgtgacaacttcgtttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 34381091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 232
Target Start/End: Complemental strand, 12401365 - 12401282
Alignment:
Q  149 atttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||||||||||||||| ||||||| ||| |||| ||| || |||| |||| || | |||||| ||||| |||||||| ||||||    
T  12401365 atttgtacatccatttcatgacaactttagtgacaaccttatttttctctcttcttattggtcaaaaacaatggagacagaaaa 12401282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 25345521 - 25345402
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||  || |||||||| |||| ||  || |||| |||| || | |||||| ||||| |||  |||||||||| ||||     
T  25345521 gagcaatgatatttgtacatccattccataacaattttagtgacaatcttatttttctctcttcttattggtcaaaaacaataaagagagaaaaaggaag 25345422  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| | ||||||    
T  25345421 agagatgataagaccatcat 25345402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 10232648 - 10232578
Alignment:
Q  173 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||||| |||||  |||| |||| |||| |||||| |||| |||||||||||||||| |||| |||||    
T  10232648 ttttggtgacaacttcttttttctctcttttcattggttaaaattaatggagagagaaaaaggaagagaga 10232578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 12661869 - 12661939
Alignment:
Q  173 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||||| |||||  |||| |||| |||| |||||| |||| |||||||||||||||| |||| |||||    
T  12661869 ttttggtgacaacttcttttttctctcttttcattggttaaaattaatggagagagaaaaaggaagagaga 12661939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 34888884 - 34888846
Alignment:
Q  134 gaaaagagcaataatatttgtacatccatttaatgacaa 172  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  34888884 gaaaagagaaataatatttgaacatccatttaatgacaa 34888846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 372616 - 372701
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||||| || |||| ||||||||||| ||| ||| ||| || | |||| ||| || ||||| |||| ||||||||||    
T  372616 atatttgtacatccaattgatgataattttggtgacaaccttgcttttctatctttttattagtcaaaaacaatgaagagagaaaa 372701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 14914544 - 14914460
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||||||||||||||||| || | || |||| ||| |||||||||||  ||| || | |||||| ||||| |||||||||||||||    
T  14914544 atatttgtacatccatttcat-ataactttgatgacaactttgtttttatctcttcttattggtcaaaaacaatggagagagaaaa 14914460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 20719912 - 20719996
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||| |||||||||| | ||||| ||| |||| |||||  |||  |||| |||| |||||| |||||||||||||||||||||    
T  20719912 atatttgaacatccatttga-gacaacttttgtgacaacttcttttctctctcttttcattggtcaaaaataatggagagagaaaa 20719996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 25038223 - 25038150
Alignment:
Q  179 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataa 252  Q
    ||||||||||  |||  ||| ||||||||||| ||||||||| ||||||||||| |||| |||||  |||||||    
T  25038223 tgataactttagttttatctcttttgattggttaaaaataatagagagagaaaaaggaagagagagaataataa 25038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 172
Target Start/End: Complemental strand, 31006228 - 31006195
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaa 172  Q
    ||||||| ||||||||||||||||||||||||||    
T  31006228 gagcaatgatatttgtacatccatttaatgacaa 31006195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 32873081 - 32873130
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||| |||||||||||||||| ||||  ||| |||||||||||    
T  32873081 aactttgtttttctctattttgattggtcaaaatcaatagagagagaaaa 32873130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 16553640 - 16553568
Alignment:
Q  186 tttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 258  Q
    ||||||||  ||| ||||||||| | ||||| ||||||||||||||| |||| ||| || |||| ||||||||    
T  16553640 tttgtttttatctcttttgattgatcaaaaacaatggagagagaaaaaggaagagaaaatataacaacatcat 16553568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 36415994 - 36416054
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||| ||| |||| ||||||||||| ||||||| | ||||||||||| |||| |||||    
T  36415994 aactttggttttctctcttttgattggtcaaaaatactagagagagaaaaaggaagagaga 36416054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 39595448 - 39595353
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||| ||| |||||| || |||| ||| |||| |||||  |||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  39595448 atatttgaacaaccatttgat-acaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 39595353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 4e-35; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 131 - 258
Target Start/End: Original strand, 33881585 - 33881712
Alignment:
Q  131 attgaaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaa 230  Q
    ||||||| ||||||| |||||||||||| |||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| |||  | ||||||    
T  33881585 attgaaatgagcaatgatatttgtacattcatttaatgataattttggtgacaactttgttttcctctcttttgattggtaaaaaacaataaaaagagaa 33881684  T
Q  231 aagggaatagagaagataataacatcat 258  Q
    || |||| ||||| ||||||||||||||    
T  33881685 aaaggaagagagaggataataacatcat 33881712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 284
Target Start/End: Complemental strand, 5901069 - 5900926
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||||||||| |||| ||||||| ||| |||||||  || |||| |||| || | ||| |||||||||||||||||||||||| | ||     
T  5901069 gagcaatgatatttgtacatcaatttcatgacaactttagtgataatcttatttttctcttttgttattagtaaaaaataatggagagagaaaaagaaag 5900970  T
Q  239 agagaagataataacatcatctgtgtacaaatatcatttctcaatt 284  Q
    ||||| ||||| |||||||  |||||||||||||||||||||||||    
T  5900969 agagatgataagaacatca--tgtgtacaaatatcatttctcaatt 5900926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 17157316 - 17157228
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagaga 227  Q
    ||||||| ||||||||||||| |||||||||||| |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||||||    
T  17157316 gagcaatgatatttgtacatcaatttaatgacaactttggtgataactttgcttttctctcttttgattggtcaaaaacaatggagaga 17157228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 29609764 - 29609856
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggt-aaaaaataatggagagaga 229  Q
    |||||||| ||||||||||||| |||||||||||| |||||||| |||||||||||||||| |||||||| || ||||||||||| |||||||    
T  29609764 agagcaatgatatttgtacatcaatttaatgacaactttggtgacaactttgttttcctctcttttgatttgtcaaaaaataatgaagagaga 29609856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 26041493 - 26041374
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||| ||||||| ||| |||| ||||||||||| |||| || | |||||| ||||| |||||||||| |||| ||||     
T  26041493 gagcaatgatatttgtacatccattttatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagaaaaaaaggaag 26041394  T
Q  239 agagaagataataacatcat 258  Q
    |||||  |||| ||||||||    
T  26041393 agagagaataagaacatcat 26041374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 27164725 - 27164844
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||  ||||||||||| |||| ||||||||||| |||| || | |||||| ||||| |||||| | |||||| ||||     
T  27164725 gagcaatgatatttgtacatccattccatgacaattttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggaaaaagaaaaaggaag 27164824  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| | ||||||    
T  27164825 agagaggataagaccatcat 27164844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 30864305 - 30864424
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  30864305 gagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctcttttcttattggtcaaaaacaatggagagagaaaaaggaag 30864404  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| | ||||||    
T  30864405 agagaggataagaccatcat 30864424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 10014851 - 10014936
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||||| || ||||||| |||||||| || |||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  10014851 atatttgtacatccaattgatgacaactttggtgacaattttgtttttctctctttttattggtcaaaaacaatggagagagaaaa 10014936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 25614717 - 25614802
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||| | || |||||||||||||||| ||| ||||||| |||| || | |||||||||||| |||||||||||||||    
T  25614717 atatttgtacatctaattgatgacaattttggtgacaaccttgtttttctctcttcttattggtaaaaaacaatggagagagaaaa 25614802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 42060832 - 42060747
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||| |||||||||||| |||||||| |||||||  || |||| ||||||||||| ||||| |||||||||| ||||    
T  42060832 atatttgtacatctatttaatgacaactttggtgacaactttgcctttctctcttttgattggtcaaaaacaatggagagaaaaaa 42060747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 44511324 - 44511203
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||||| |||||||||||||||||| ||||||| ||| |||| || |||||||| |||| || | |||||| ||||| ||||| |||| |||| |||    
T  44511324 aagagcaatgatatttgtacatccattttatgacaactttagtgacaattttgtttttctcttttcttattggtcaaaaacaatggggagaaaaaaagga 44511225  T
Q  237 atagagaagataataacatcat 258  Q
    | |||||  |||| ||||||||    
T  44511224 agagagagaataagaacatcat 44511203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 39369485 - 39369381
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||  |||||||||||| ||||| ||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  39369485 gagcaatgatattttgacatccatttaaggacaactttagtgacaactttgtttttctcttttcttattggttaaaaacaatggagagagaaaaaggaag 39369386  T
Q  239 agaga 243  Q
    |||||    
T  39369385 agaga 39369381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 33050366 - 33050247
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||| ||||||| ||| |||| ||| ||||||  |||| || | |||||| ||||| ||| ||||||||||| ||||     
T  33050366 gagcaatgatatttgtacatccatttcatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatagagagagaaaaaggaag 33050267  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| | ||||||    
T  33050266 agagaggataagaccatcat 33050247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 147 - 258
Target Start/End: Complemental strand, 42431898 - 42431787
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 246  Q
    |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| ||||| ||    
T  42431898 atatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagagga 42431799  T
Q  247 taataacatcat 258  Q
    ||| | ||||||    
T  42431798 taagatcatcat 42431787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 38978678 - 38978565
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||||||| |||||||||||||| ||| ||||||| ||| |||| ||| ||||||| |||| || | ||| || ||||| ||||||||||||||| |    
T  38978678 aaaagagcaatgatatttgtacatcc-tttcatgacaactttagtgacaaccttgtttttctctcttcttatttgtcaaaaacaatggagagagaaaaag 38978580  T
Q  235 gaatagagaagataa 249  Q
    ||| ||||| |||||    
T  38978579 gaagagagaggataa 38978565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 116814 - 116695
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||| ||||||| ||| |||| ||  ||||||| || | |||| ||| || ||||| |||||||||||||||  |||     
T  116814 gagcaatgatatttgtacatccatttcatgacaactttagtgacaatcttgtttttctttctttttattcgtcaaaaacaatggagagagaaaaatgaag 116715  T
Q  239 agagaagataataacatcat 258  Q
    ||| ||||||| | ||||||    
T  116714 agaaaagataagaccatcat 116695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 228
Target Start/End: Original strand, 30402081 - 30402168
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagag 228  Q
    ||||||| ||||||||||||| |||| |||| ||||||||||| ||||||||||  || | |||| |||||||||||| |||| ||||||    
T  30402081 gagcaatgatatttgtacatctatttcatgataattttggtgacaactttgttt--ctttctttttattggtaaaaaacaatgaagagag 30402168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 240
Target Start/End: Original strand, 42476464 - 42476557
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatag 240  Q
    ||||||||||||||| || ||||||| ||||| || ||| |||||||  ||| |||| |||||| ||||| || |||||||||||| |||||||    
T  42476464 atatttgtacatccaattgatgacaactttggcgacaaccttgtttttttctctttttattggtcaaaaacaacggagagagaaaaaggaatag 42476557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 2469819 - 2469771
Alignment:
Q  195 ctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  2469819 ctctattttcattggtaaaaaataatggagagagaaaaaggaagagaga 2469771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 20406725 - 20406605
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| ||||||| ||||||||||||| |||| || || || |||||||||||  ||| |||| |||||| ||||||||  ||||||| |||   ||    
T  20406725 agagcaatgatatttggacatccatttaataacaacttcggcgacaactttgtttttttctctttttattggtcaaaaataacagagagaggaaaattaa 20406626  T
Q  238 tagagaagataataacatcat 258  Q
     ||||| ||||| ||||||||    
T  20406625 gagagaggataaaaacatcat 20406605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 29162166 - 29162286
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| |||||||||||| ||||  ||||||| ||| |||| ||  ||||||| |||| |||| |||| | ||||| ||||||||||||||| | ||    
T  29162166 agagcaatgatatttgtacattcattccatgacaactttagtgacaatcttgtttttctctctttttattgatcaaaaacaatggagagagaaaaagaaa 29162265  T
Q  238 tagagaagataataacatcat 258  Q
     ||||| ||||| | ||||||    
T  29162266 gagagaggataagatcatcat 29162286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 23330090 - 23330002
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 229  Q
    ||||||| ||||||||| || |||||| ||  ||||||||||| ||| ||||||  |||| |||| |||||||||||||||| ||||||||    
T  23330090 gagcaatgatatttgtatattcatttattggaaattttggtgacaaccttgttt--ctctctttttattggtaaaaaataatagagagaga 23330002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 3345044 - 3344955
Alignment:
Q  140 agcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 229  Q
    |||||| |||||||||||| ||||||||||||||||||  || ||| |||||||  ||| |||| |   || ||||||||||||||||||    
T  3345044 agcaatgatatttgtacattcatttaatgacaattttgaagacaaccttgtttttatctcttttaacatgtcaaaaataatggagagaga 3344955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 8742558 - 8742473
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||||||| |||| || | |||| | | ||| |||||||||||||||    
T  8742558 atatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattgatcataaacaatggagagagaaaa 8742473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 16645554 - 16645623
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattg 208  Q
    ||||||| |||||||| ||| |||||||||| || |||| ||| || ||||||||||||| |||||||||    
T  16645554 gagcaatgatatttgtccattcatttaatgataactttgttgacaattttgttttcctctcttttgattg 16645623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 17619915 - 17619984
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattg 208  Q
    ||||||| |||||||| ||| |||||||||| || |||| ||| || ||||||||||||| |||||||||    
T  17619915 gagcaatgatatttgtccattcatttaatgataactttgttgacaattttgttttcctctcttttgattg 17619984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 249
Target Start/End: Original strand, 19880117 - 19880229
Alignment:
Q  137 aagagcaataatatttgtacatccattt-aatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 235  Q
    ||||||||||||||||||||||||||||  ||||||| ||| |||| ||  || |||| |||| || | || |||  |||||||||||||||||||| ||    
T  19880117 aagagcaataatatttgtacatccatttgcatgacaactttagtgacaatcttatttttctctcttcttatgggt-caaaataatggagagagaaaaagg 19880215  T
Q  236 aatagagaagataa 249  Q
    || ||||| |||||    
T  19880216 aagagagaggataa 19880229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 37385129 - 37385214
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||||| | |||| || | |||||| ||||| ||| |||||||||||    
T  37385129 atatttgtacatccaattgatgacaactttggtgacaaccttgttcttctcttttcttattggtcaaaaacaattgagagagaaaa 37385214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 42640986 - 42640933
Alignment:
Q  179 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||| ||| |||| ||||||||||| ||||||||| |||||||||||    
T  42640986 tgataactttgattttctcttttttgattggtcaaaaataatagagagagaaaa 42640933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 47530187 - 47530272
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||| |||| ||||||| |||||||||||| ||||||| || | || | |||||  ||||| |||||||||| ||||    
T  47530187 atatttgtacatctatttcatgacaactttggtgataaccttgtttttctttcttcttattggctaaaaacaatggagagaaaaaa 47530272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 232
Target Start/End: Original strand, 25332385 - 25332480
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||||||||||||||||| ||| ||||||  | |||| |||  |||||||||  ||||||||  |||| |||||| ||||| |||||||||||||||    
T  25332385 aaagagcaataatatttgaacaaccatttgctaacaactttattgataacttctttttcctc-ctttttattggttaaaaacaatggagagagaaaa 25332480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 249
Target Start/End: Original strand, 2346947 - 2347057
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||| ||||| ||||||| ||| |||| ||| || |||| || | || | |||||| ||||  |||||||||||||||  |||     
T  2346947 gagcaatgatatttgtacattcattttatgacaactttagtgacaaccttatttttctttcttgttattggtcaaaagcaatggagagagaaaaaagaag 2347046  T
Q  239 agagaagataa 249  Q
    ||||| |||||    
T  2347047 agagaggataa 2347057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 19426728 - 19426659
Alignment:
Q  173 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||||| |||||| ||||| ||| |||| |||||  ||||||||||||||||||||| |||| |||||    
T  19426728 ttttggtgacaacttttttttc-tctcttttcattggataaaaataatggagagagaaaaaggaagagaga 19426659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 22331129 - 22331203
Alignment:
Q  169 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||||||| | || ||| ||||| | |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  22331129 acaatttttgggacaaccttgttatgctctcttttcattggtaaaaaacaatggagagagaaaaaggaagagaga 22331203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 249
Target Start/End: Original strand, 43255451 - 43255565
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||| ||| ||||||||||||| | || |||| ||||||||||| ||  ||  ||| |||| || | ||| || |||||||||||||||| |||| |    
T  43255451 aaaagagtaatgatatttgtacatctaattgatgataattttggtgacaatcttacttttctctcttcttattagtcaaaaataatggagagaaaaaaag 43255550  T
Q  235 gaatagagaagataa 249  Q
    ||| ||||| |||||    
T  43255551 gaagagagatgataa 43255565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 47424908 - 47424977
Alignment:
Q  173 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||||| || ||| ||||||||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  47424908 ttttggtgacaatttt-ttttcctctctttttattggttaaaaacaatggagagagaaaaaggaagagaga 47424977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 21037168 - 21037217
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||| |||||||||||| ||| ||||  |||||||||||||||    
T  21037168 aactttgtttttctctattttgatcggtcaaaatcaatggagagagaaaa 21037217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 21153191 - 21153142
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||| ||| |||| ||||||||||| ||||||||| |||||||||||    
T  21153191 aactttgattttctctcttttgattggtcaaaaataatagagagagaaaa 21153142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 30862768 - 30862715
Alignment:
Q  190 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||| |||| |||| |||||| ||||||||||||||||||||| |||| |||||    
T  30862768 tttttctctctttttattggtcaaaaataatggagagagaaaaaggaagagaga 30862715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 30982293 - 30982346
Alignment:
Q  190 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||||| |||| |||||||||||||||| || |||||||| |||| |||||    
T  30982293 ttttcctctctttttattggtaaaaaataattgaaagagaaaaaggaagagaga 30982346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 36990173 - 36990120
Alignment:
Q  190 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||| |||| |||| |||||| ||||||||||||||||||||| |||| |||||    
T  36990173 tttttctctttttttattggttaaaaataatggagagagaaaaaggaagagaga 36990120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 44894371 - 44894455
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||| |||||||||| | || |||||| |||| |||||  |||  |||| |||| |||||||||||| |||||||||||||||    
T  44894371 atatttgaacatccatttga-gataatttttgtgacaacttcttttatctctcttttcattggtaaaaaacaatggagagagaaaa 44894455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 34348971 - 34349019
Alignment:
Q  195 ctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  34348971 ctctcttttcattggtaaaaaacaatggagagagaaaaaggaagagaga 34349019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 37325728 - 37325800
Alignment:
Q  160 catttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||| |||| |||||| |||| ||  ||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  37325728 catttcatgaaaattttagtgacaatattgtttttctctctttttattggttaaaaacaatggagagagaaaa 37325800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 249
Target Start/End: Complemental strand, 37392228 - 37392116
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||||| ||||||| ||| ||||||  | |||| |||  ||| ||| |  |||| |||| |||| |||||| ||||| ||||||||||||||| |||    
T  37392228 aagagcaatgatatttgaacaaccatttgctaacaactttcatgacaacctcatttttctctcttttcattggttaaaaacaatggagagagaaaaagga 37392129  T
Q  237 atagagaagataa 249  Q
    | |||||| ||||    
T  37392128 agagagaaaataa 37392116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 35382 - 35500
Alignment:
Q  140 agcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaata 239  Q
    |||||| ||||||||||||| |||||||||||||||||| || || ||||||||||||| ||||||||||| ||||||||||||||||||||| |||| |    
T  35382 agcaatgatatttgtacatctatttaatgacaattttggagaaaattttgttttcctctcttttgattggtcaaaaataatggagagagaaaaaggaaga 35481  T
Q  240 gagaagataataacatcat 258  Q
    ||||  |||||||||||||    
T  35482 gagagaataataacatcat 35500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 255
Target Start/End: Original strand, 30413620 - 30413736
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||| |||| ||||||||||| ||||| ||||||||||||||| ||||     
T  30413620 gagcaatgatatttgtacatccatttaatgacaattttggtgacaactttgcttttctctcttttgattggtcaaaaacaatggagagagaaaaaggaag 30413719  T
Q  239 agagaagataataacat 255  Q
    ||||| ||||| |||||    
T  30413720 agagaggataacaacat 30413736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 135 - 258
Target Start/End: Original strand, 43936345 - 43936466
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||||||||| |||||||| |||| |||| |||||| ||||| ||||||||||||||| |    
T  43936345 aaaagagcaatgatatttgtacatc-atttaatcacaattttggtgataattttgtttttctctttttttattggtcaaaaacaatggagagagaaaa-g 43936442  T
Q  235 gaatagagaagataataacatcat 258  Q
    ||| ||||||||||||||||||||    
T  43936443 gaagagagaagataataacatcat 43936466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 33004007 - 33003887
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| |||||||||||||| ||||||||||| |||||||||||| || ||||||||| |||| |||| ||||||| ||||||||||| ||| ||||    
T  33004007 agagcaatgatatttgtacatccttttaatgacaactttggtgataacctttttttcctctgtttttattgataaaaaacaatggagagaggaaaaggaa 33003908  T
Q  238 tagagaagataataacatcat 258  Q
     |||||  |||||||||||||    
T  33003907 aagagagaataataacatcat 33003887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 12175217 - 12175335
Alignment:
Q  140 agcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaata 239  Q
    |||||| ||||||||||||  ||||||||| || |||||||| |||||||||||||||| ||||||||||| ||||| |||| ||||| |||| |||| |    
T  12175217 agcaatgatatttgtacatttatttaatgataactttggtgacaactttgttttcctctcttttgattggtcaaaaacaatgaagagaaaaaaaggaaga 12175316  T
Q  240 gagaagataataacatcat 258  Q
    |||| ||||||||||||||    
T  12175317 gagaggataataacatcat 12175335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 10550346 - 10550466
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||| ||| ||||||| |||||||||| ||||||| |||| ||| ||||||||||| ||||||||| |||||| ||||| ||||||||||||||| ||||    
T  10550346 agagtaatgatatttggacatccatttgatgacaactttgttgacaactttgtttttctctatttttattggtcaaaaacaatggagagagaaaaaggaa 10550445  T
Q  238 tagagaagataataacatcat 258  Q
     ||||| ||||| | ||||||    
T  10550446 gagagaggataagagcatcat 10550466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 38021539 - 38021420
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| ||||||||||||| ||||||||| || |||||||| || |||||||  |||| ||||||||||| ||||| ||||||||||||||| ||||    
T  38021539 agagcaatgatatttgtacatc-atttaatgataactttggtgacaattttgtttctctctcttttgattggtcaaaaacaatggagagagaaaaaggaa 38021441  T
Q  238 tagagaagataataacatcat 258  Q
     |||||  |||||||||||||    
T  38021440 gagagagaataataacatcat 38021420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 44484544 - 44484663
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||||||||| |||| ||||||| ||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  44484544 gagcaatgatatttgtacatcaattttatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaag 44484643  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| ||||||||    
T  44484644 agagatgataagaacatcat 44484663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 234
Target Start/End: Complemental strand, 36582441 - 36582344
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||| ||| ||||||| ||||||| | |||||| ||||| |||| ||||||||||||    
T  36582441 aagagcaatgatatttgtacatccatttgatgacaactttggtgacaaccttgtttttctctattctaattggtcaaaaacaatgaagagagaaaagg 36582344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 258
Target Start/End: Complemental strand, 37966536 - 37966420
Alignment:
Q  142 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 241  Q
    |||| |||||||||||||||||| ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||||||| |||    
T  37966536 caatgatatttgtacatccatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaagggaagaga 37966437  T
Q  242 gaagataataacatcat 258  Q
    || ||||| | ||||||    
T  37966436 gaggataagaccatcat 37966420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 179 - 258
Target Start/End: Complemental strand, 27540158 - 27540079
Alignment:
Q  179 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 258  Q
    |||||||||||||||||||| ||||||||||| ||||| | ||||||||||||| |||| ||||| ||||||||||||||    
T  27540158 tgataactttgttttcctcttttttgattggtcaaaaacattggagagagaaaaaggaagagagaggataataacatcat 27540079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 258
Target Start/End: Original strand, 3195973 - 3196094
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||||| |||||||||||||||||  ||||||| ||| || | ||| ||||||| |||| || | |||||| ||||||||||||||||||||| |||    
T  3195973 aagagcaatgatatttgtacatccattccatgacaactttagtaacaaccttgtttttctctcttcttattggtcaaaaataatggagagagaaaaagga 3196072  T
Q  237 atagagaagataataacatcat 258  Q
    | ||||| ||||| | ||||||    
T  3196073 agagagatgataagatcatcat 3196094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 33029989 - 33030102
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| ||||||||||||| || ||||||||| |||| ||| ||| ||||||| ||||||||| ||||||  |||| ||||||||||||||| ||||    
T  33029989 agagcaatgatatttgtacatctatctaatgacaactttgatgacaaccttgtttttctctatttttattggttgaaaacaatggagagagaaaaaggaa 33030088  T
Q  238 tagagaagataata 251  Q
     ||| | |||||||    
T  33030089 gagaaaggataata 33030102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 5962813 - 5962728
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||| | || |||| ||||||||||||||||||||||| |||| || | |||||| ||||| |||||||||||||||    
T  5962813 atatttgtacatctaattgatgataattttggtgataactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 5962728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 255
Target Start/End: Original strand, 22353066 - 22353179
Alignment:
Q  142 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 241  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| |||| || |||| || | ||||||  |||| |||| | |||||||| |||| |||    
T  22353066 caatgatatttgtacatccatttaatgataattttggtgataaccttgtatttctctcttcttattggtcgaaaacaatgaaaagagaaaaaggaagaga 22353165  T
Q  242 gaagataataacat 255  Q
    || ||||| |||||    
T  22353166 gaggataacaacat 22353179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 30973895 - 30973983
Alignment:
Q  155 acatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||||||||| | |||||||||| ||||||||||||||| |||  |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  30973895 acatccatttgaagacaattttgatgataactttgtttttctcactttttattggtcaaaaacaatggagagagaaaaaggaagagaga 30973983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 23047971 - 23048069
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    ||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||    
T  23047971 gagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaa 23048069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 249
Target Start/End: Original strand, 29871239 - 29871353
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    |||||||| || |||||||| |||| |||| ||||||| |||||||| ||||||||||  |||| || | |||||| ||||| |||||||||||||||      
T  29871239 aaaagagccatgatatttgtccatctatttcatgacaactttggtgacaactttgtttctctctcttcttattggttaaaaacaatggagagagaaaaaa 29871338  T
Q  235 gaatagagaagataa 249  Q
    ||| ||||| |||||    
T  29871339 gaagagagaggataa 29871353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 6885095 - 6884974
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||||| |||||||||||| ||||| ||||||| ||| |||| ||||||||||| |||| || | ||| || ||||| |||||||| ||||||  ||    
T  6885095 aagagcaatgatatttgtacattcatttcatgacaactttagtgacaactttgtttttctctcttcttattagtcaaaaacaatggagatagaaaaaaga 6884996  T
Q  237 atagagaagataataacatcat 258  Q
    | ||||| ||||| | ||||||    
T  6884995 agagagaggataagaccatcat 6884974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 12192122 - 12192026
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||||||||||| || || | || |||||||| ||| ||| ||| ||||||||| |||||| ||||| ||||||||||||||| |||| |||||    
T  12192122 atatttgtacatccaattgataataactttggtgacaaccttgcttttctctatttttattggtcaaaaacaatggagagagaaaaaggaagagaga 12192026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 232
Target Start/End: Original strand, 9694955 - 9695042
Alignment:
Q  145 taatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||| ||||| || ||||||| |||||||| ||| ||| ||| ||||||||| || ||| |||||||||| ||||||||||    
T  9694955 taatatttgtaaatccaattgatgacaactttggtgacaaccttgcttttctctatttttatcggtcaaaaataatgaagagagaaaa 9695042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 258
Target Start/End: Complemental strand, 36383633 - 36383526
Alignment:
Q  151 ttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataat 250  Q
    ||||||||| |||| || |||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| ||||| |||||     
T  36383633 ttgtacatcaatttcataacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagatgataag 36383534  T
Q  251 aacatcat 258  Q
    ||||||||    
T  36383533 aacatcat 36383526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 258
Target Start/End: Original strand, 30192236 - 30192358
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 235  Q
    |||||| ||| ||||||||||||||| || |||| ||||| |  || ||| ||| ||| |||| |||| |||||||||||| |||||||| ||||||  |    
T  30192236 aaagagtaatgatatttgtacatccaattgatgataatttggacgaaaaccttgcttttctctttttttattggtaaaaaacaatggagaaagaaaaatg 30192335  T
Q  236 aatagagaagataataacatcat 258  Q
    |||||||| ||||| || |||||    
T  30192336 aatagagaggataaaaatatcat 30192358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 36909740 - 36909824
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||||||||||||||||| || |||| |||| ||| ||||||||||| |||| || | |||||| ||||| |||||||||||||||    
T  36909740 atatttgtacatccatttcat-acaactttgatgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 36909824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 4097128 - 4097068
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctct 198  Q
    |||||||| |||||||| |||||||||||| ||||||||||||| ||| ||||||| ||||    
T  4097128 agagcaatgatatttgtccatccatttaataacaattttggtgacaaccttgtttttctct 4097068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 38246638 - 38246758
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| ||||||||||||| |||  ||||||| ||| |||| ||| ||||||  |||| || | |||||| ||||| ||||||| ||||||| ||||    
T  38246638 agagcaatgatatttgtacatcaattccatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatggagggagaaaaaggaa 38246737  T
Q  238 tagagaagataataacatcat 258  Q
     ||||| ||||| | ||||||    
T  38246738 gagagaggataagaccatcat 38246758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 29893793 - 29893674
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||||| |||||||  |||| || ||| |||| || |||||||| |||| || | |||| | ||||| ||||||||||||||| ||||     
T  29893793 gagcaatgatatttgtatatccattctatgataagtttagtgacaattttgtttttctctcttcttattgatcaaaaacaatggagagagaaaaaggaag 29893694  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| | ||||||    
T  29893693 agagaggataagaccatcat 29893674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 34138959 - 34139030
Alignment:
Q  173 ttttggtgataactttgttttcctctattttgattgg-taaaaaataatggagagagaaaagggaatagaga 243  Q
    |||||| || |||||| |||||||||||||| ||||| ||||||| ||||||||||||||| ||||| ||||    
T  34138959 ttttggcgacaacttttttttcctctattttcattggttaaaaaacaatggagagagaaaaaggaattgaga 34139030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 23391247 - 23391141
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||| ||| |||||||||||||||||  |||| || ||| | || ||||||||||| |||| || | |||| | |||||||||||||| |||||| |||    
T  23391247 aagaggaatgatatttgtacatccattccatgataactttagcgacaactttgtttttctctcttcttattgatcaaaaataatggagaaagaaaaagga 23391148  T
Q  237 atagaga 243  Q
    | |||||    
T  23391147 agagaga 23391141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 26809665 - 26809579
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttg-ttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||| || || |||||||||||||||||| |||| ||||| | | |||  |||||| ||||| |||||||||||||||    
T  26809665 atatttgtacatctatatagtgacaattttggtgataattttgattttcttatttttctattggttaaaaacaatggagagagaaaa 26809579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 12358488 - 12358403
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||| ||| || | |||| |||||| ||||| |||| ||||||||||    
T  12358488 atatttgtacatccaattgatgacaactttggtgacaaccttgcttttctatctttttattggtcaaaaacaatgaagagagaaaa 12358403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 13466007 - 13466056
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||| |||||||||||||||| |||| |||| |||||||||||    
T  13466007 aactttgtttttctctattttgattggtcaaaattaatagagagagaaaa 13466056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 14954522 - 14954591
Alignment:
Q  174 tttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||| ||| ||| ||||||| |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  14954522 tttgatgacaaccttgtttttctcttttttaattggtaaaaaacaatggagagagaaaaaggaagagaga 14954591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 232
Target Start/End: Complemental strand, 33857400 - 33857307
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||| ||||||  ||||| |||||| ||||| |||||||| |||||| |||| || | || | |||||| ||||| |||||||||||||||    
T  33857400 gagcaatgatattttgacatctatttaaggacaactttggtgacaactttatttttctgtcttcttattggtcaaaaacaatggagagagaaaa 33857307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 229
Target Start/End: Original strand, 27307131 - 27307223
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 229  Q
    ||||||||| |||||| ||||||||||  ||||||| ||| |||| ||| || |||| |||| || | |||||| ||||| ||||||||||||    
T  27307131 aagagcaatgatatttatacatccattccatgacaactttagtgacaaccttatttttctctcttcttattggtcaaaaacaatggagagaga 27307223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 39133858 - 39133786
Alignment:
Q  186 tttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 258  Q
    |||||||| |||| |||| |||||| ||||||||||||||||||||| | || | |||| |||| ||||||||    
T  39133858 tttgtttttctctttttttattggttaaaaataatggagagagaaaaagtaagaaagaaaataacaacatcat 39133786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 1298333 - 1298258
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 258  Q
    |||||| ||||||||| ||||||||||| ||||| |||| ||| ||||||  ||| ||||  ||||||||||||||    
T  1298333 aactttattttcctctcttttgattggtcaaaaacaatgaagaaagaaaaaagaagagaggggataataacatcat 1298258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 3298993 - 3299112
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||| || |||||| ||||||||| ||||||||||| ||  || |||  |||| || | |||||| ||||| ||||||||||||||| | ||     
T  3298993 gagcaatgataattatacatctatttaatgataattttggtgacaatcttatttctctctcttcttattggttaaaaacaatggagagagaaaaagtaag 3299092  T
Q  239 agagaagataataacatcat 258  Q
    ||||| |||||  |||||||    
T  3299093 agagaggataacgacatcat 3299112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 6851591 - 6851666
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 258  Q
    ||||||||||| |||| ||||||||||| ||||| ||| |||||||||||  ||| |||||  |||| ||||||||    
T  6851591 aactttgtttttctctcttttgattggtcaaaaacaattgagagagaaaaatgaagagagagaataacaacatcat 6851666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 243
Target Start/End: Complemental strand, 28165315 - 28165208
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 235  Q
    |||||| ||||||||||| ||| ||||||  | |||| |||  ||| ||| || |||  |||| |||| |||||| ||||||||||||||||||||| ||    
T  28165315 aaagagaaataatatttgaacaaccatttgctaacaactttcatgacaaccttttttctctctctttttattggtcaaaaataatggagagagaaaaagg 28165216  T
Q  236 aatagaga 243  Q
    || |||||    
T  28165215 aagagaga 28165208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 6639416 - 6639470
Alignment:
Q  195 ctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 249  Q
    |||| |||| |||||||||||| ||||||||||||||| |||| |||||| ||||    
T  6639416 ctctcttttcattggtaaaaaacaatggagagagaaaaaggaagagagaaaataa 6639470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 6851559 - 6851597
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttg 177  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  6851559 gagcaatgatatttgtacatccatttaatgacaactttg 6851597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 19913929 - 19913863
Alignment:
Q  177 ggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||| |||||| |||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  19913929 ggtgacaactttttttttctctcttttcattggttaaaaacaatggagagagaaaaaggaagagaga 19913863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 26321620 - 26321689
Alignment:
Q  173 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||||||||||||||| ||||| ||| |||| |||||| ||||| ||| ||||||||||| |||| |||||    
T  26321620 ttttggtgataacttttttttc-tctcttttcattggttaaaaacaattgagagagaaaaaggaagagaga 26321689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 34101131 - 34101073
Alignment:
Q  180 gataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    |||||||||  ||||||||||||| |||||| ||||||||| |||||| |||| |||||    
T  34101131 gataactttcatttcctctatttttattggtcaaaaataatagagagaaaaaaaggaat 34101073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 39744526 - 39744592
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 249  Q
    ||||||||||| |||||||||||||||| ||||  ||| ||||||||||| || | |||||| ||||    
T  39744526 aactttgtttttctctattttgattggtcaaaatcaatagagagagaaaaaggtagagagaaaataa 39744592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 4062032 - 4061983
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataact 186  Q
    ||||| ||| ||||||| |||||||||||||||||||||| |||| ||||    
T  4062032 aagagaaatgatatttgaacatccatttaatgacaatttttgtgacaact 4061983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 13104633 - 13104564
Alignment:
Q  168 gacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    ||||||||| |||| |||||  |||| |||| |||| |||||| ||||| ||||||||||||||| ||||    
T  13104633 gacaatttttgtgacaacttattttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaa 13104564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 23880227 - 23880174
Alignment:
Q  190 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||| |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  23880227 tttttctctcttttcattggtaaaaaaaaatggagagagaaaaaggaagagaga 23880174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 32750152 - 32750083
Alignment:
Q  168 gacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    ||||||||| |||| |||||  |||| |||| |||| |||||| ||||| ||||||||||||||| ||||    
T  32750152 gacaatttttgtgacaacttattttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaa 32750083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 41353417 - 41353478
Alignment:
Q  171 aattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||||| |||| |||||  |||| |||| |||| |||||| |||||||||||||||||||||    
T  41353417 aatttttgtgacaacttcttttttctctttttttattggttaaaaataatggagagagaaaa 41353478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 16051332 - 16051380
Alignment:
Q  195 ctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||| ||||||||||| ||||||||| ||||||||||| |||| |||||    
T  16051332 ctcttttttgattggtcaaaaataatagagagagaaaaaggaagagaga 16051380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 27540188 - 27540156
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatga 169  Q
    ||||||||| |||||||||||||||||||||||    
T  27540188 aagagcaatgatatttgtacatccatttaatga 27540156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 31635742 - 31635802
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||| ||| ||||  |||||||||| ||||||||| ||||||||||| |||| |||||    
T  31635742 aactttgattttctcttctttgattggtcaaaaataatagagagagaaaaaggaagagaga 31635802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 37480130 - 37480090
Alignment:
Q  4 ggaggagcacagactcaggtcccaggccaataccaccaggc 44  Q
    |||||||||||  ||||||||||| ||||||||||||||||    
T  37480130 ggaggagcacactctcaggtcccaagccaataccaccaggc 37480090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 38572114 - 38572018
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||||||||||| || || || |||| |||||||| ||| ||||||| |||| || | |||||| ||| | |||||||||||| ||  |||||||||    
T  38572114 atatttgtacattcaattgataacaactttggtgacaaccttgtttttctctcttcttattggtcaaagacaatggagagagagaaatgaatagaga 38572018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 9e-33; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 11089763 - 11089664
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattgg-taaaaaataatggagagagaaaagg 234  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||| ||||||||||| |||||||||||||    
T  11089763 aaagagcaatgatatttgtacatccatttaatgacaattttggtgacaactttgtttttctcttttttgattggttaaaaaataatagagagagaaaagg 11089664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 135 - 258
Target Start/End: Complemental strand, 43587828 - 43587705
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||  ||||||||||||||| |    
T  43587828 aaaagagcaatgatatttgtatatccatttaatgacaactttggtgacaactttgtttttctctcttttgattggtaaaaagcaatggagagagaaaaag 43587729  T
Q  235 gaatagagaagataataacatcat 258  Q
    ||| |||||  |||| ||||||||    
T  43587728 gaagagagagaataacaacatcat 43587705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 34972248 - 34972131
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||||||||| |||||||||||| |||||||| || |||||||| |||| ||||||||| | |||||||||||||||| ||||  |||     
T  34972248 gagcaatgatatttgtacatctatttaatgacaactttggtgacaattttgtttttctcttttttgattgatcaaaaataatggagagaaaaaa--gaag 34972151  T
Q  239 agagaagataataacatcat 258  Q
    ||||||||||||||||||||    
T  34972150 agagaagataataacatcat 34972131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 38504353 - 38504234
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| || |||||||| |||| ||||||||||| ||||| |||||||||||||||  |||     
T  38504353 gagcaatgatatttgtacatccatttaattacaattttggtgacaattttgtttttctctcttttgattggtcaaaaacaatggagagagaaaaatgaag 38504254  T
Q  239 agagaagataataacatcat 258  Q
    || || ||||| ||||||||    
T  38504253 agtgaggataacaacatcat 38504234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 43602311 - 43602430
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||||||||||| |||||||| ||||||||||  |||| ||||||||||| ||||| |||  ||| |||||| ||||     
T  43602311 gagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgtttctctctcttttgattggtcaaaaacaatatagaaagaaaaaggaaa 43602410  T
Q  239 agagaagataataacatcat 258  Q
    |||||  |||||| ||||||    
T  43602411 agagagaataataccatcat 43602430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 254
Target Start/End: Complemental strand, 23952673 - 23952562
Alignment:
Q  142 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 241  Q
    |||| |||||||||| || |||| ||||||| ||| ||||||| |||||||| |||| |||| |||||| ||||||||||||||||||||| | ||||||    
T  23952673 caatgatatttgtacgtctattttatgacaactttagtgataattttgtttttctctttttttattggtcaaaaataatggagagagaaaa-gaaataga 23952575  T
Q  242 gaagataataaca 254  Q
    |||||||| ||||    
T  23952574 gaagataagaaca 23952562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 258
Target Start/End: Complemental strand, 1065604 - 1065481
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||||||| |||||||||||||||||  ||||||| ||| |||||||| ||||||| || | || |  ||||| ||||| ||||||||||||||| |    
T  1065604 aaaagagcaatgatatttgtacatccattccatgacaactttagtgataaccttgtttttctatcttctttttggtcaaaaacaatggagagagaaaaag 1065505  T
Q  235 gaatagagaagataataacatcat 258  Q
    ||| ||||| ||||| | ||||||    
T  1065504 gaagagagaggataagaccatcat 1065481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 30927819 - 30927938
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||| ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| | ||     
T  30927819 gagcaatgatatttgtacatccatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaag 30927918  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| | ||||||    
T  30927919 agagaggataagaccatcat 30927938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 258
Target Start/End: Complemental strand, 41273702 - 41273579
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||||||| |||||||||||||||||  ||||||| ||| || | ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |    
T  41273702 aaaagagcaatgatatttgtacatccattccatgacaactttagtaacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaag 41273603  T
Q  235 gaatagagaagataataacatcat 258  Q
    ||| ||||| ||||| | ||||||    
T  41273602 gaagagagaggataagaccatcat 41273579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 232
Target Start/End: Original strand, 6105323 - 6105416
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||| ||| |||||||||||||||| ||||| ||| |||| |||||| ||||||||| ||||||||||| ||||| |||| ||||| ||||    
T  6105323 gagcaatgatacttgtacatccatttaaagacaactttagtgacaactttattttcctctcttttgattggtcaaaaacaatgtagagaaaaaa 6105416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 243
Target Start/End: Original strand, 6825161 - 6825269
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    |||||| |||||||||||||||||| ||||| |||||| |||||||  ||| || |||| |||| || | |||||| ||||| ||||||||||||||| |    
T  6825161 aaaagaacaataatatttgtacatctatttattgacaactttggtgtcaaccttatttttctctcttcttattggttaaaaacaatggagagagaaaaag 6825260  T
Q  235 gaatagaga 243  Q
    ||| |||||    
T  6825261 gaacagaga 6825269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 258
Target Start/End: Original strand, 41293613 - 41293728
Alignment:
Q  142 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 241  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||||| ||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  41293613 caatgatatttgtacatccattccatgacaactttagtgacaactt-gtttttctctcttcttattggtcaaaaacaatggagagagaaaatggaagaga 41293711  T
Q  242 gaagataataacatcat 258  Q
    |||||||| | ||||||    
T  41293712 gaagataagaccatcat 41293728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 249
Target Start/End: Original strand, 39258943 - 39259053
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||  |||||||||||  ||||||  ||||||| |||| || | ||| || ||||| ||||||||||||||| ||||     
T  39258943 gagcaatgatatttgtacatccattccatgacaattttaatgataatcttgtttttctctcttcttattagtcaaaaacaatggagagagaaaaaggaag 39259042  T
Q  239 agagaagataa 249  Q
    ||||| |||||    
T  39259043 agagatgataa 39259053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 11139071 - 11138986
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||| | || ||||||| |||||||| ||||||||||| || | |||| |||||| |||||||||| ||||||||||    
T  11139071 atatttgtacatcaaattgatgacaactttggtgacaactttgtttttctatctttttattggtcaaaaataatgaagagagaaaa 11138986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 19723093 - 19723213
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| ||||||||||||| || | ||||||| ||| |||| ||| ||||||| |||| || | ||| || ||||| ||||||||||||||| ||||    
T  19723093 agagcaatgatatttgtacatctatatcatgacaactttagtgacaaccttgtttttctctcttcttattagtcaaaaacaatggagagagaaaaaggaa 19723192  T
Q  238 tagagaagataataacatcat 258  Q
     ||||| ||||| | ||||||    
T  19723193 gagagaggataagaccatcat 19723213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 30129584 - 30129500
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaa 231  Q
    ||||||||||||||| || ||||||| |||||||| ||||||| ||| |||| || | |||||| |||||||||||||| |||||    
T  30129584 atatttgtacatccaattgatgacaactttggtgacaactttgcttttctctcttcttattggtcaaaaataatggagaaagaaa 30129500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 29509405 - 29509330
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 258  Q
    |||||||||||||||| |||| |||||| ||||| |||| |||||||||| |||| ||||| |||||||| |||||    
T  29509405 aactttgttttcctctctttttattggtcaaaaacaatgaagagagaaaaaggaagagagaggataataatatcat 29509330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 2597056 - 2597146
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||||||| || || ||||||| |||||||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||    
T  2597056 atatttgtacattcaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaa 2597146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 33817337 - 33817247
Alignment:
Q  142 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||| ||||||||||||| |||| || |||||||| |||| ||  ||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  33817337 caatgatatttgtacatctatttcataacaattttagtgacaatcttgtttttctctctttttattggtcaaaaacaatggagagagaaaa 33817247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 5925230 - 5925145
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||| ||||||||||||| ||||||| |||  ||| ||| || |||| ||||||| | |||||| |||||||||||||||||||||    
T  5925230 atatatgtacatccatttgatgacaacttttatgacaaccttatttttctctattcttattggtcaaaaataatggagagagaaaa 5925145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 14228879 - 14228786
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 229  Q
    |||||||||| |||| ||||||||||||| |||| |||||| |||| || ||| |||| |||| |||| |||||| ||||| |||| |||||||    
T  14228879 aaagagcaatgatatatgtacatccatttcatgataattttagtgacaattttatttttctctttttttattggtcaaaaacaatgaagagaga 14228786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 14531804 - 14531683
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||||||||||||||||| || | |||||||  ||  ||| ||| || |||| |||| || | |||| |  |||| |||||||||||||||  ||||    
T  14531804 gagcaataatatttgtacatctatctcatgacaacattaatgacaaccttatttttctctcttcttattgatctaaaacaatggagagagaaaaatgaat 14531705  T
Q  239 agagaagataataacatcatct 260  Q
    ||||||||||| ||||||||||    
T  14531704 agagaagataagaacatcatct 14531683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 147 - 243
Target Start/End: Original strand, 37562037 - 37562133
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||||||||||| || ||||||| |||| ||| ||| ||||||| |||| || | |||||| ||||| |||||||| |||||| |||| |||||    
T  37562037 atatttgtacatccaattgatgacaactttgatgacaaccttgtttttctctcttcttattggtcaaaaacaatggagaaagaaaaaggaagagaga 37562133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 40211635 - 40211754
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||||||||||||| ||| |||| || | ||   |||||||||| |||| || | |||||| ||||| ||||||||||||||| | ||     
T  40211635 gagcaatgatatttgtacatccattgaataacaacttagttgtatactttgtttttctctcttcttattggttaaaaacaatggagagagaaaaagtaag 40211734  T
Q  239 agagaagataataacatcat 258  Q
    |||||  |||| ||||||||    
T  40211735 agagataataacaacatcat 40211754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 6849408 - 6849466
Alignment:
Q  191 tttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 249  Q
    ||||||||||||  |||||||||||||||| ||||||||||| |||| |||||| ||||    
T  6849408 tttcctctatttctattggtaaaaaataatagagagagaaaaaggaagagagaaaataa 6849466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 11879412 - 11879482
Alignment:
Q  173 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||| | |||||  |||| |||| ||||||||||| ||||||||||||||||||||| |||| |||||    
T  11879412 ttttggtaacaacttcctttttctctcttttgattggttaaaaataatggagagagaaaaaggaagagaga 11879482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 11896828 - 11896898
Alignment:
Q  173 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||| | |||||  |||| |||| ||||||||||| ||||||||||||||||||||| |||| |||||    
T  11896828 ttttggtaacaacttcctttttctctcttttgattggttaaaaataatggagagagaaaaaggaagagaga 11896898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 249
Target Start/End: Complemental strand, 36064205 - 36064103
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 246  Q
    ||||||||||||||| || |||| || |||||||| ||  ||| |||  ||| |||| |||||| |||||||||||||||| |||| |||| ||||| ||    
T  36064205 atatttgtacatccaattgatgataactttggtgacaaacttgcttttatctctttttattggtcaaaaataatggagagaaaaaaaggaagagagatga 36064106  T
Q  247 taa 249  Q
    |||    
T  36064105 taa 36064103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 249
Target Start/End: Complemental strand, 36497836 - 36497734
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 246  Q
    ||||||||||||| | || ||||||| |||| | | ||| ||||||| |||| |||| |||||| ||||| ||| ||||||||||| | || ||||||||    
T  36497836 atatttgtacatctaattgatgacaactttgataacaaccttgtttttctctctttttattggttaaaaacaatagagagagaaaaagtaagagagaaga 36497737  T
Q  247 taa 249  Q
    |||    
T  36497736 taa 36497734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 43186469 - 43186386
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||||||||||| ||||  || |||||||| |||| || |||||||  ||||||||| |||||| ||||| |||||||||||||||    
T  43186469 atatttgtacattcattccataacaattttagtgacaattttgttt--ctctatttttattggtcaaaaacaatggagagagaaaa 43186386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 5924985 - 5924900
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||| ||||||||||||| ||||||| |||  ||| ||| || |||| |||| || | |||||| |||||||||||||||||||||    
T  5924985 atatatgtacatccatttgatgacaactttcatgacaaccttatttttctctcttcttattggtcaaaaataatggagagagaaaa 5924900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 12783762 - 12783815
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataacttt 188  Q
    ||||||| ||| ||||||| |||||||||||||||||||||| |||| ||||||    
T  12783762 aaaagagaaatgatatttgaacatccatttaatgacaatttttgtgacaacttt 12783815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 34765746 - 34765831
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||| | || ||||||||||| |||| ||| ||  ||| |||| |||| |||||| ||||| |||||||||||||||    
T  34765746 atatttgtacatctaattgatgacaattttagtgacaaccttacttttctctttttttattggtcaaaaacaatggagagagaaaa 34765831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 36593673 - 36593778
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | ||| |  ||||| ||||||||||||| | ||||    
T  36593673 agagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattagccaaaaacaatggagagagaagaaggaa 36593772  T
Q  238 tagaga 243  Q
     |||||    
T  36593773 gagaga 36593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 37033029 - 37033093
Alignment:
Q  178 gtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||||||| ||||||||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  37033029 gtgataacttttttttcctct-ttttcattggtcaaaaacaatggagagagaaaaaggaaaagaga 37033093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 39153612 - 39153665
Alignment:
Q  179 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||| ||| |||| ||||||||||| ||||||||| |||||||||||    
T  39153612 tgataactttgattttctctcttttgattggtcaaaaataatagagagagaaaa 39153665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 13884472 - 13884380
Alignment:
Q  166 atgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 258  Q
    ||||||| ||| |||| || |||||||| |||| || | |||| | ||||| ||||||||||||||| |||| ||||| ||||| ||||||||    
T  13884472 atgacaactttagtgacaattttgtttttctctcttcttattgatcaaaaacaatggagagagaaaaaggaagagagatgataagaacatcat 13884380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 30925577 - 30925652
Alignment:
Q  173 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 249  Q
    ||||||||| |||||| ||||| ||| |||| |||||| ||||| ||||||||||||||| |||| |||||| ||||    
T  30925577 ttttggtgacaacttttttttc-tctcttttcattggttaaaaacaatggagagagaaaaaggaagagagaaaataa 30925652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 40719576 - 40719636
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||| ||| |||| ||||||||||| ||||||||| ||||||||||| |||| |||||    
T  40719576 aactttggttttctctcttttgattggtcaaaaataatagagagagaaaaaggaagagaga 40719636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 249
Target Start/End: Original strand, 6745926 - 6746041
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataa-ctttgttttcctctattttgattggtaaaaaataatggagagagaaaag 233  Q
    |||||||||||  ||||||||||||||||  ||||||||||| |||| || ||| ||||| |||| || | |||| | ||||| ||||| | |||||||     
T  6745926 aaaagagcaatggtatttgtacatccattccatgacaattttagtgacaaccttagtttttctctcttcttattgattaaaaacaatggggggagaaaaa 6746025  T
Q  234 ggaatagagaagataa 249  Q
    |||| ||||| |||||    
T  6746026 ggaagagagaggataa 6746041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 41520010 - 41519951
Alignment:
Q  171 aattttggtgataactttgtttt-cctctattttgattggtaaaaaataatggagagaga 229  Q
    ||||||||||||||| ||||||| ||||| |||| |||||| ||||| ||||||||||||    
T  41520010 aattttggtgataaccttgtttttcctctctttttattggtcaaaaacaatggagagaga 41519951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 44086440 - 44086503
Alignment:
Q  179 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagag 242  Q
    |||||||||  ||||||||| |||  |||||| |||||||||||| ||||||||||||| ||||    
T  44086440 tgataacttccttttcctctctttctattggtcaaaaataatggaaagagaaaagggaagagag 44086503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 249
Target Start/End: Original strand, 6656227 - 6656337
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    |||||||  ||||||||||||||||  |||| |||||| |||| ||| ||||||| |||| || | |||| | ||||| |||||| ||||||||  |||     
T  6656227 gagcaatggtatttgtacatccattccatgataattttagtgacaaccttgtttttctctcttcttattgatcaaaaacaatggaaagagaaaaatgaag 6656326  T
Q  239 agagaagataa 249  Q
    ||||| |||||    
T  6656327 agagaggataa 6656337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 249
Target Start/End: Original strand, 6736629 - 6736739
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    |||||||  ||||||||||||||||  |||| |||||| |||| ||| ||||||| |||| || | |||| | ||||| |||||| ||||||||  |||     
T  6736629 gagcaatggtatttgtacatccattccatgataattttagtgacaaccttgtttttctctcttcttattgatcaaaaacaatggaaagagaaaaatgaag 6736728  T
Q  239 agagaagataa 249  Q
    ||||| |||||    
T  6736729 agagaggataa 6736739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 7129707 - 7129618
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||||||| ||||| || |||| |||| ||| ||||||||||| |||| || | |||||| ||||| || |||||||||||| ||||    
T  7129707 atatttgtacattcatttcat-acaactttgatgacaactttgtttttctctcttcttattggtcaaaaacaacggagagagaaaaaggaa 7129618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 248
Target Start/End: Complemental strand, 8888428 - 8888326
Alignment:
Q  147 atatttgtacatccatt-taatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaag 245  Q
    ||||||||| ||||||| || |||||| |||||||| ||| ||| ||| |||  || | |||||| ||||| ||||||||||||||| |||| ||||| |    
T  8888428 atatttgtatatccattatagtgacaactttggtgacaaccttgattttctcatttcttattggttaaaaacaatggagagagaaaaaggaagagagagg 8888329  T
Q  246 ata 248  Q
    |||    
T  8888328 ata 8888326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 20288716 - 20288606
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||  || || | ||| |||| ||| ||||||  |||| || | |||||| ||||| ||||||||||||||| | ||     
T  20288716 gagcaatgatatttgtacatccattccattacgactttagtgacaacgttgtttctctctcttcttattggtcaaaaacaatggagagagaaaaagaaag 20288617  T
Q  239 agagaagataa 249  Q
    ||||| |||||    
T  20288616 agagaggataa 20288606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 21075345 - 21075235
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||  || || | ||| |||| ||| ||||||  |||| || | |||||| ||||| ||||||||||||||| | ||     
T  21075345 gagcaatgatatttgtacatccattccattacgactttagtgacaacgttgtttctctctcttcttattggtcaaaaacaatggagagagaaaaagaaag 21075246  T
Q  239 agagaagataa 249  Q
    ||||| |||||    
T  21075245 agagaggataa 21075235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 22836057 - 22836131
Alignment:
Q  169 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||||||| | |||||| ||||| | |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  22836057 acaatttttgggataaccttgttgtgctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 22836131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 34474137 - 34474028
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaa-ttttggtgataactttgttttc-ctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||| ||| ||||||| ||| |||||| || |||| ||||||||| |||||  ||||| |||| |||| |||||| ||||| |||||||||||||||    
T  34474137 aaaagagtaatgatatttgaacaaccatttcat-acaacttttggtgacaacttctttttctctcttttttcattggttaaaaacaatggagagagaaaa 34474039  T
Q  233 gggaatagaga 243  Q
     |||| |||||    
T  34474038 aggaagagaga 34474028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 35595390 - 35595300
Alignment:
Q  142 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||| |||||||||||||  | |||||| || |||||||| ||| ||| ||| |||| || | |||||||||||| |||||||| ||||||    
T  35595390 caatgatatttgtacatctgtctaatgataagtttggtgacaaccttgcttttctctcttcttattggtaaaaaacaatggagaaagaaaa 35595300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 9208065 - 9208114
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactt 187  Q
    |||| ||| ||||||| |||||||||||||||||||||| |||| |||||    
T  9208065 agagaaatgatatttgaacatccatttaatgacaatttttgtgacaactt 9208114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 13565402 - 13565483
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaa 216  Q
    ||||||||||| ||||||||||||| ||||||| |||| |||  ||| ||| ||| ||| || |||| | ||||||||||||    
T  13565402 aaaagagcaatgatatttgtacatcaatttaatcacaactttaatgacaaccttgcttttctttattcttattggtaaaaaa 13565483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 27630893 - 27630934
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaatttt 176  Q
    ||||||| ||| |||||||||||||||||| |||||||||||    
T  27630893 aaaagagaaatgatatttgtacatccattttatgacaatttt 27630934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 28473484 - 28473537
Alignment:
Q  190 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||| |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  28473484 tttttctctcttttcattggtaaaaaacaatggagagagaaaaaggaagagaga 28473537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 30608642 - 30608691
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||| || | ||||||||||||||||||||  |||||||||||    
T  30608642 aactttgtttttctatcttttgattggtaaaaaataacagagagagaaaa 30608691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 34970389 - 34970300
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagaga 227  Q
    |||||||| ||||||  |||| ||||||| ||||| ||| || | ||||||||||| |||| || | |||||| ||||| ||||||||||    
T  34970389 agagcaatgatattttgacattcatttaaggacaactttagtaacaactttgtttttctctcttcttattggttaaaaacaatggagaga 34970300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 39027606 - 39027557
Alignment:
Q  200 ttttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 249  Q
    |||| |||||||||||||||||||||||||||| | || |||||| ||||    
T  39027606 tttttattggtaaaaaataatggagagagaaaaagaaagagagaaaataa 39027557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 11114613 - 11114673
Alignment:
Q  195 ctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 255  Q
    ||||||||  |||||| ||||||||| ||||||||||| |||| |||||| |||| |||||    
T  11114613 ctctatttctattggtcaaaaataatagagagagaaaaaggaagagagaaaataaaaacat 11114673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 244
Target Start/End: Complemental strand, 22767284 - 22767208
Alignment:
Q  168 gacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaa 244  Q
    ||||| ||| |||| |||||  |||| |||| |||| |||||| ||||| ||||||||||||||| |||| ||||||    
T  22767284 gacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagagaa 22767208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 229
Target Start/End: Original strand, 37568498 - 37568590
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 229  Q
    ||||||||| |||||||||||||||||| || | || ||| |||| ||| ||||||| || | || | |||||| ||||| ||| ||||||||    
T  37568498 aagagcaatgatatttgtacatccatttcattataactttagtgacaacattgtttttcttttttcttattggtcaaaaacaatagagagaga 37568590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 40102150 - 40102102
Alignment:
Q  195 ctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  40102150 ctctcttttcattggtaaaaaaaaatggagagagaaaaaggaagagaga 40102102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 10385599 - 10385478
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||||| ||||||||||||||||||||||| || |||||||| || |||| ||| |||| ||||||||||| ||||| ||||||||||||||| |||    
T  10385599 aagagcaatgatatttgtacatccatttaatgataactttggtgacaattttgcttttctcttttttgattggtcaaaaacaatggagagagaaaaagga 10385500  T
Q  237 atagagaagataataacatcat 258  Q
    ||||||| ||||| ||||||||    
T  10385499 atagagaggataacaacatcat 10385478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 43195977 - 43196096
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||| | | |||| ||||||||||| ||||| ||||||||||||||| ||||     
T  43195977 gagcaataatatttgtacatctatttaatgacaactttggtgataactttgatgttctctcttttgattggtcaaaaacaatggagagagaaaaaggaag 43196076  T
Q  239 agagaagataataacatcat 258  Q
    |||||  |||| ||||||||    
T  43196077 agagagaataacaacatcat 43196096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 251
Target Start/End: Original strand, 49189096 - 49189211
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 235  Q
    ||||| |||| |||||||||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||| ||||| ||||||||||||||| |     
T  49189096 aaagaacaatgatatttgtacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtcaaaaacaatggagagagaaaaaga 49189195  T
Q  236 aatagagaagataata 251  Q
    || ||||| |||||||    
T  49189196 aagagagaggataata 49189211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 5383943 - 5383823
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||| |||| ||||||||||  ||||| |||| ||||| |||| ||||    
T  5383943 agagcaatgatatttgtacatccatttaattacaactttggtgacaactttgtttttctctcttttgattggctaaaaacaatgaagagaaaaaaaggaa 5383844  T
Q  238 tagagaagataataacatcat 258  Q
     ||||| ||||| ||||||||    
T  5383843 gagagaggataacaacatcat 5383823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 37669582 - 37669462
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| |||||||||||| |||||||||| ||||| ||||| ||||||||| |||||| ||||||||||| ||||| ||| |||||  |||| ||||    
T  37669582 agagcaatgatatttgtacattcatttaatgataatttcggtgacaactttgttctcctcttttttgattggtcaaaaacaatagagagtcaaaaaggaa 37669483  T
Q  238 tagagaagataataacatcat 258  Q
     ||||| ||||||||||||||    
T  37669482 gagagaggataataacatcat 37669462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 2257617 - 2257701
Alignment:
Q  174 tttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 258  Q
    |||| ||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||| || |||||||||||||||||    
T  2257617 tttgatgacaactttgttttcctctcttttgattggtcaaaaacaatggagagagaaaaaggaaaagtgaagataataacatcat 2257701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 136 - 258
Target Start/End: Original strand, 6829670 - 6829792
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 235  Q
    |||||||||| |||||||||||||||||  ||||||| ||| |||| ||  ||||||| |||| || | |||||| ||||||||| ||||||||||| ||    
T  6829670 aaagagcaatgatatttgtacatccattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaataatagagagagaaaaagg 6829769  T
Q  236 aatagagaagataataacatcat 258  Q
    || ||||| ||||| | ||||||    
T  6829770 aagagagatgataagaccatcat 6829792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 148 - 258
Target Start/End: Original strand, 36669267 - 36669377
Alignment:
Q  148 tatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagat 247  Q
    |||||||| |||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||||||||||||||||||| |||| ||||| |||    
T  36669267 tatttgtaaatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaataatggagagagaaaaaggaagagagaggat 36669366  T
Q  248 aataacatcat 258  Q
    || ||||||||    
T  36669367 aaaaacatcat 36669377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 13813743 - 13813622
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||||| |||||||||||||||||  || |||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||    
T  13813743 aagagcaatgatatttgtacatccattccataacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagga 13813644  T
Q  237 atagagaagataataacatcat 258  Q
    | ||||| ||||| | ||||||    
T  13813643 agagagaggataagaccatcat 13813622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 19920949 - 19920852
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||| ||||||  |||||||||||| ||||| |||||||| ||||||||||| |||| || | |||||| ||||| |||| ||||||||||    
T  19920949 aaaagagcaatgatattttgacatccatttaaggacaactttggtgacaactttgtttttctctcttcttattggtcaaaaacaatgaagagagaaaa 19920852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 27578366 - 27578246
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| |||||||||||| ||||  ||||||||||| || | ||| ||||||| ||||||| | |||||| ||||| ||||||||||||||| | ||    
T  27578366 agagcaatgatatttgtacattcattccatgacaattttagtaacaaccttgtttttctctattcttattggtcaaaaacaatggagagagaaaaagaaa 27578267  T
Q  238 tagagaagataataacatcat 258  Q
     ||||| ||||| | ||||||    
T  27578266 gagagaggataagaccatcat 27578246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 26501478 - 26501359
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||||||||| |||  ||||||| |||  ||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||  ||||    
T  26501478 gagcaatgatatttgtacatctattacatgacaactttaatgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaatgaat 26501379  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| ||||||||    
T  26501378 agagaggataagaacatcat 26501359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 164 - 255
Target Start/End: Complemental strand, 39669964 - 39669873
Alignment:
Q  164 taatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 255  Q
    ||||||||| |||| ||| |||||| |||| ||||||||| ||||||  |||| ||||||||||||||| | |||||||| |||||||||||    
T  39669964 taatgacaactttgatgacaactttatttttctctatttttattggttgaaaacaatggagagagaaaaagaaatagagatgataataacat 39669873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 50035426 - 50035545
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||||||||| |||| ||||||| ||| |||| |||||| |||| |||| || | |||||| ||||| ||| ||||||||||| ||||     
T  50035426 gagcaatgatatttgtacatctatttcatgacaactttagtgacaactttatttttctcttttgttattggtcaaaaagaatagagagagaaaaaggaag 50035525  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| || |||||    
T  50035526 agagatgataaaaatatcat 50035545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 258
Target Start/End: Original strand, 3291310 - 3291432
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 235  Q
    |||||| ||| |||||||||||||||||  |||||||||||  ||||||| ||||||  |||| || |  ||||| |||||||||||| |||||||| ||    
T  3291310 aaagagtaatgatatttgtacatccattccatgacaattttaatgataaccttgtttctctctcttctttttggtcaaaaataatggaaagagaaaaagg 3291409  T
Q  236 aatagagaagataataacatcat 258  Q
    || ||||| ||||| | ||||||    
T  3291410 aagagagatgataagaccatcat 3291432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 42843240 - 42843325
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||||| || |||| ||||||||||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||    
T  42843240 atatttgtacatccaattgatgataattttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 42843325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 7371835 - 7371955
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    ||||| || |||| ||||||||||||  ||||||| |||  ||||||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||     
T  7371835 agagcgatgatatatgtacatccattccatgacaactttactgataactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggag 7371934  T
Q  238 tagagaagataataacatcat 258  Q
     ||||| ||||| | ||||||    
T  7371935 gagagaggataagaccatcat 7371955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 243
Target Start/End: Original strand, 50777319 - 50777415
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||||||||||| || |||||||||||||||| ||| ||||||| |||| || | |||||| ||||| ||| |||||| |||| |||| |||||    
T  50777319 atatttgtacatccaattgatgacaattttggtgacaaccttgtttttctctcttcttattggttaaaaacaatagagagataaaaaggaagagaga 50777415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 258
Target Start/End: Complemental strand, 9011820 - 9011709
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 246  Q
    |||||||||||||||||| |||||||| || |||| ||  ||||||| |||| || | |||||| ||||| ||||||||||||||| | || ||||| ||    
T  9011820 atatttgtacatccatttcatgacaatgttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaagagagagga 9011721  T
Q  247 taataacatcat 258  Q
    ||| | ||||||    
T  9011720 taagaccatcat 9011709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 147 - 249
Target Start/End: Complemental strand, 50797955 - 50797853
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 246  Q
    ||||||||||||| | || |||| || |||||||| ||  |||||||  ||| |||| |||||| ||||||||||||||||||||| |||| ||||| ||    
T  50797955 atatttgtacatctaattgatgataactttggtgacaaacttgtttttatctctttttattggtcaaaaataatggagagagaaaaaggaagagagatga 50797856  T
Q  247 taa 249  Q
    |||    
T  50797855 taa 50797853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 10302271 - 10302324
Alignment:
Q  179 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||| ||| |||| ||||||||||||||||||||| |||||||||||    
T  10302271 tgataactttgattttctctcttttgattggtaaaaaataatagagagagaaaa 10302324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 25130888 - 25130767
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 236  Q
    ||||||| | ||||||||||||| |||| ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| |||| |||| ||||| |||    
T  25130888 aagagcagtgatatttgtacatctatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatgaagagggaaaaagga 25130789  T
Q  237 atagagaagataataacatcat 258  Q
    | ||||| ||||| | ||||||    
T  25130788 agagagaggataagatcatcat 25130767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 25995647 - 25995524
Alignment:
Q  137 aagagcaataatatttgtacatccat--ttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||||| ||||||||||||| ||  || ||||||| |||  ||| ||| || |||| |||| |||| |||||| ||||| ||||||||||||||| |    
T  25995647 aagagcaatgatatttgtacatctatatttcatgacaactttaatgacaaccttatttttctctctttttattggtcaaaaacaatggagagagaaaaag 25995548  T
Q  235 gaatagagaagataataacatcat 258  Q
    ||| ||||| ||||| | ||||||    
T  25995547 gaagagagaggataagaccatcat 25995524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 27895649 - 27895752
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||  |||| ||||||| ||||| ||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  27895649 gagcaatgatattttgacattcatttaaggacaactttagtgacaactttgtttttctctcttcttattggttaaaaa-aatggagagagaaaaaggaag 27895747  T
Q  239 agaga 243  Q
    |||||    
T  27895748 agaga 27895752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 258
Target Start/End: Original strand, 29489243 - 29489366
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||||| | ||||||||||||  |||| ||||||| ||| |||| ||| ||||||| || | || | |||||| ||||| |||||||||||||||      
T  29489243 aaaagagcagtgatatttgtacatatatttcatgacaactttagtgacaaccttgtttttctttcttcttattggtcaaaaacaatggagagagaaaaaa 29489342  T
Q  235 gaatagagaagataataacatcat 258  Q
    ||| ||||| ||||| | ||||||    
T  29489343 gaagagagaggataagaccatcat 29489366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 29362624 - 29362690
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 249  Q
    ||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||||||||||    
T  29362624 aactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaagataa 29362690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 8670215 - 8670162
Alignment:
Q  179 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||||| || | ||||||||||| ||||||||| |||||||||||    
T  8670215 tgataactttgtttttctatcttttgattggtcaaaaataatagagagagaaaa 8670162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 51193029 - 51193114
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||| ||||||||||||| ||||||| |||  ||| ||| ||||||| |||| || | |||||  |||||||||||||||||||||    
T  51193029 atatatgtacatccatttgatgacaactttcatgacaacattgtttttctctcttcttattggccaaaaataatggagagagaaaa 51193114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 24749629 - 24749669
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttgg 178  Q
    |||||||| ||||||||||||||||||||| ||||||||||    
T  24749629 agagcaatgatatttgtacatccatttaataacaattttgg 24749669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 27563657 - 27563617
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttg 177  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  27563657 aagaacaatgatatttgtacatccatttaatgacaattttg 27563617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 42615996 - 42615936
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||||||| || | ||||||||||| ||||||||| ||||||||||| | ||||||||    
T  42615996 aactttgtttttctattttttgattggtcaaaaataatagagagagaaaaagaaatagaga 42615936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 255
Target Start/End: Original strand, 43457716 - 43457823
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 246  Q
    |||| ||||||||||||| | ||||| |||| ||| ||| ||||||| || | |||| |||| | ||||| ||||||||||||||| |||| ||||| ||    
T  43457716 atatatgtacatccatttgaagacaaatttgatgacaaccttgtttttctgtttttt-attgatcaaaaagaatggagagagaaaaaggaagagagagga 43457814  T
Q  247 taataacat 255  Q
     ||||||||    
T  43457815 aaataacat 43457823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 7078396 - 7078495
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 246  Q
    |||| ||||||||||||| | ||||| |||| ||| ||| ||||||  |||| || | |||||| ||||| ||||||||||| ||| |||| ||||||||    
T  7078396 atatatgtacatccatttgaagacaactttgatgacaaccttgtttctctcttttctaattggtcaaaaacaatggagagaggaaaaggaagagagaaga 7078495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 15061994 - 15061924
Alignment:
Q  173 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||||| |||||| |||| |||| |||| |||||  ||||| ||||||||||||||| |||| |||||    
T  15061994 ttttggtgacaactttttttttctctctttttattggataaaaacaatggagagagaaaaaggaagagaga 15061924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 258
Target Start/End: Original strand, 26585122 - 26585180
Alignment:
Q  200 ttttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 258  Q
    |||| |||||| ||||||||||||||||||||| |||| ||||| ||||| | ||||||    
T  26585122 tttttattggtcaaaaataatggagagagaaaaaggaagagagaggataagaccatcat 26585180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 46902778 - 46902708
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataac-tttgttttcctctattttgattggtaaaaaa 216  Q
    ||||||||||||||| || ||||||||||| |||| ||| ||| ||||||||| || | ||||||||||||    
T  46902778 atatttgtacatccaattgatgacaattttagtgacaactttttttttcctctcttcttattggtaaaaaa 46902708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 366801 - 366748
Alignment:
Q  178 gtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaa 231  Q
    |||| |||||| ||||||||| |||| |||||| ||||| ||||||||||||||    
T  366801 gtgacaacttttttttcctctcttttcattggtcaaaaacaatggagagagaaa 366748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 4618786 - 4618725
Alignment:
Q  180 gataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 241  Q
    |||||| ||||| | |||| |||| |||||| |||||||||||||||| |||| ||||||||    
T  4618786 gataaccttgttgttctcttttttcattggtcaaaaataatggagagaaaaaaaggaataga 4618725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 243
Target Start/End: Original strand, 22389411 - 22389517
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 234  Q
    ||||||| ||| ||||||| ||| |||||| ||  ||| ||| |||| |||||  |||| |||| |||| |||||| |||||||||||||| |||||| |    
T  22389411 aaaagagtaatgatatttgaacaaccatttgat--caacttttgtgacaacttcttttttctctcttttcattggtcaaaaataatggagaaagaaaaag 22389508  T
Q  235 gaatagaga 243  Q
    ||| |||||    
T  22389509 gaagagaga 22389517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 27563620 - 27563551
Alignment:
Q  186 tttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 255  Q
    |||||||| |||| ||||||||||| | ||| ||||||||||||||| |||| | | ||||||| |||||    
T  27563620 tttgtttttctctcttttgattggtcataaacaatggagagagaaaaaggaagataaaagataacaacat 27563551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 172
Target Start/End: Original strand, 51704683 - 51704720
Alignment:
Q  135 aaaagagcaataatatttgtacatccatttaatgacaa 172  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  51704683 aaaagagcaatgatatttgtatatccatttaatgacaa 51704720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 51704737 - 51704794
Alignment:
Q  201 tttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 258  Q
    |||||||||| ||||||||||||||||||| |  ||||| |||| | |||||||||||    
T  51704737 tttgattggtcaaaaataatggagagagaagaaagaataaagaaaacaataacatcat 51704794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 3606024 - 3606060
Alignment:
Q  179 tgataactttgttttcctctattttgattggtaaaaa 215  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  3606024 tgataactttgtttttctctattttgattggtcaaaa 3606060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 8905869 - 8905801
Alignment:
Q  181 ataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 249  Q
    ||||||||||||| ||||  | |||||||| ||||||||| |||| |||||| |||| |||||| ||||    
T  8905869 ataactttgtttttctcttctatgattggtcaaaaataatagagaaagaaaaaggaagagagaaaataa 8905801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 244
Target Start/End: Original strand, 25302562 - 25302638
Alignment:
Q  168 gacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaa 244  Q
    ||||||||  |||| |||||| |||| |||| |||| |||||| ||||| ||| ||||||||||| |||| ||||||    
T  25302562 gacaatttatgtgacaactttttttttctctcttttcattggttaaaaacaatagagagagaaaaaggaagagagaa 25302638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 35043608 - 35043712
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||| ||| ||||||  | ||||||||  ||| ||| |  |||| |||| |||| |||||| |||||||||||||||| |||| ||||     
T  35043608 gagcaatgatatttgaacaaccatttgctaacaattttcatgacaacctcatttttctctctttttattggttaaaaataatggagagataaaaaggaag 35043707  T
Q  239 agaga 243  Q
    |||||    
T  35043708 agaga 35043712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 40610403 - 40610308
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    ||||||| |||||||||| | ||||| ||| |||| |||||  |||  |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  40610403 atatttgaacatccatttga-gacaacttttgtgacaacttcttttctctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 40610308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 17158 - 17039
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||||||||||| |||||||| ||||||||||  |||| || |||||||| ||||| |||||||||||||||  |||     
T  17158 gagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgtttctctctcttctgattggtcaaaaacaatggagagagaaaaaagaag 17059  T
Q  239 agagaagataataacatcat 258  Q
    |||||  |||||||||||||    
T  17058 agagagaataataacatcat 17039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 1383 - 1488
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| |||||||||||||||||  ||||||||||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| ||||    
T  1383 agagcaatgatatttgtacatccattccatgacaattttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaa 1482  T
Q  238 tagaga 243  Q
     |||||    
T  1483 gagaga 1488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 31188 - 31307
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||||||||| |||  |||| |||||| |||| ||||||||||| |||| || | |||||| |||||||||||||||| |||| ||||     
T  31188 gagcaatgatatttgtacatctattacatgataattttagtgacaactttgtttttctctgttcttattggtcaaaaataatggagagataaaaaggaag 31287  T
Q  239 agagaagataataacatcat 258  Q
    ||||| ||||| ||||||||    
T  31288 agagaggataagaacatcat 31307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 258
Target Start/End: Original strand, 147143 - 147263
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 237  Q
    |||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||    
T  147143 agagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaa 147242  T
Q  238 tagagaagataataacatcat 258  Q
     ||||| ||||| | ||||||    
T  147243 gagagacgataagaccatcat 147263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 2392 - 2496
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| ||||||||||||||| || |||| ||||||||||| ||  ||| ||| |||| |||| |||||| ||||||||||||||||||| | ||||     
T  2392 gagcaatgatatttgtacatccaattgatgataattttggtgacaatcttgattttctctctttttattggtcaaaaataatggagagagaagaaggaag 2491  T
Q  239 agaga 243  Q
    |||||    
T  2492 agaga 2496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 232
Target Start/End: Original strand, 249028 - 249123
Alignment:
Q  137 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||| | ||||| |||||||||||||||    
T  249028 aagagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattgatcaaaaacaatggagagagaaaa 249123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 252
Target Start/End: Complemental strand, 29969 - 29852
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagag-aaaagg 234  Q
    ||||| |||| |||||||||||||||||||||||||| ||| || | ||| ||||||| |||| |||| |||| | | ||| | ||||||||| |||| |    
T  29969 aaagatcaatgatatttgtacatccatttaatgacaactttagttacaaccttgtttttctctctttttattgatcagaaacattggagagagaaaaaag 29870  T
Q  235 gaatagagaagataataa 252  Q
    ||| ||||| ||||||||    
T  29869 gaagagagatgataataa 29852  T

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Target: scaffold0119 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 2158 - 2230
Alignment:
Q  183 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 255  Q
    |||||||||||||||| ||||||||| | |||||||||  | |||||||| |||| ||||| |||||||||||    
T  2158 aactttgttttcctctcttttgattgatcaaaaataataaaaagagaaaaaggaagagagaggataataacat 2230  T

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Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 147 - 255
Target Start/End: Complemental strand, 5254 - 5146
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 246  Q
    ||||||||| ||| || || ||||||||||||||| ||||||| |||  ||  |||| |||||| |||||||||||| ||||||||  ||| ||||| ||    
T  5254 atatttgtatatctatatagtgacaattttggtgacaactttgattttttcactttttattggttaaaaataatggaaagagaaaaaagaagagagatga 5155  T
Q  247 taataacat 255  Q
    ||| |||||    
T  5154 taaaaacat 5146  T

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Target: scaffold0011 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 18777 - 18674
Alignment:
Q  139 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 238  Q
    ||||||| |||||||||||||||||  | ||||| ||| |||||||| || |||| ||||||| | ||| || ||||| ||||||||||||||| ||||     
T  18777 gagcaatgatatttgtacatccattcca-gacaactttagtgataaccttatttttctctattcttattagtcaaaaacaatggagagagaaaaaggaag 18679  T
Q  239 agaga 243  Q
    |||||    
T  18678 agaga 18674  T

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Target: scaffold0193 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 232
Target Start/End: Complemental strand, 24857 - 24763
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    |||||||  ||||||||||||| |||| |||| |||||| |||| ||| || |||| |||| || | |||||| ||||| |||||||||||||||    
T  24857 agagcaacgatatttgtacatctatttcatgataattttagtgacaaccttatttttctctcttcttattggttaaaaacaatggagagagaaaa 24763  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 31518 - 31592
Alignment:
Q  169 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 243  Q
    |||||||| |||| |||||| |||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  31518 acaatttttgtgacaactttttttttctctcttttcattggttaaaaacaatggagagagaaaaaggaagagaga 31592  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 88994 - 88893
Alignment:
Q  136 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 235  Q
    |||||||||| |||||||||||||||| | |||| || ||| |||| ||| || ||||  ||| || | |||||| ||||| ||||||||||||||| ||    
T  88994 aaagagcaatgatatttgtacatccatctcatgataactttagtgacaaccttatttttttcttttcttattggtcaaaaacaatggagagagaaaaagg 88895  T
Q  236 aa 237  Q
    ||    
T  88894 aa 88893  T

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Target: scaffold0618 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 3545 - 3424
Alignment:
Q  138 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaat-aatggagagagaaaaggga 236  Q
    |||||||| |||||||||||| ||||| | ||||| ||| |||| ||| || |||| || | || | |||||| |||||| |||||||| |||||| |||    
T  3545 agagcaatgatatttgtacattcatttcacgacaactttagtgacaaccttatttttctttcttcttattggtcaaaaataaatggagaaagaaaaagga 3446  T
Q  237 atagagaagataataacatcat 258  Q
    | ||||| ||||| | ||||||    
T  3445 agagagaggataagaccatcat 3424  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 72067 - 72152
Alignment:
Q  147 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 232  Q
    ||||||||||||| || |  |||||| |||||||| ||| ||| ||| ||| ||| | |||||| |||||||||||| ||||||||    
T  72067 atatttgtacatctatatggtgacaactttggtgacaaccttggttttctcaattcttattggttaaaaataatggaaagagaaaa 72152  T

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