View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18494_high_23 (Length: 266)
Name: NF18494_high_23
Description: NF18494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18494_high_23 |
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Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 9 - 252
Target Start/End: Original strand, 33117880 - 33118123
Alignment:
| Q |
9 |
gaagaatatgtgcttgttctgctcggtctgcattataggaagaatcacataaactttgttatcaagttcaattctttgtcatcaagttcaatattcattt |
108 |
Q |
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| T |
33117880 |
gaagaaaatgtgcttgttctgctcggtctgcattataggaagaatcacataaactttgttatcaagttcaattctttgtcatcaagttcaatattcattt |
33117979 |
T |
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| Q |
109 |
tagttgctatgtagctcacgttaaagtgactaaaatcaatatgtttgacatatcacagagatgatttcaaacataaatttttattcatgaacaaaaatca |
208 |
Q |
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| T |
33117980 |
tagttgctatgtagctcacattaaagtgactaaaatcaatatgtttgacgtatcacagagatgatttcaaacataaatttttattcatgaacaaaaatca |
33118079 |
T |
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| Q |
209 |
aacagtaaagaccnnnnnnntatattgtaatcactagaagaata |
252 |
Q |
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|||| |||||||| |||||||||||||||||||||||| |
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| T |
33118080 |
aacaataaagaccaaaaaaatatattgtaatcactagaagaata |
33118123 |
T |
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