View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18494_low_21 (Length: 295)

Name: NF18494_low_21
Description: NF18494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18494_low_21
NF18494_low_21
[»] chr6 (35 HSPs)
chr6 (18-280)||(34429560-34429822)
chr6 (19-87)||(24836262-24836330)
chr6 (19-91)||(10452419-10452491)
chr6 (19-65)||(2514641-2514687)
chr6 (34-92)||(3204600-3204658)
chr6 (19-53)||(32843412-32843446)
chr6 (19-92)||(4006653-4006726)
chr6 (31-92)||(5550083-5550144)
chr6 (19-92)||(6310282-6310355)
chr6 (19-84)||(29274295-29274360)
chr6 (125-194)||(30784612-30784681)
chr6 (19-71)||(33068640-33068692)
chr6 (22-77)||(323753-323808)
chr6 (163-202)||(733101-733140)
chr6 (19-90)||(8420257-8420328)
chr6 (159-194)||(12111070-12111105)
chr6 (21-59)||(781326-781364)
chr6 (26-92)||(1402942-1403008)
chr6 (140-194)||(2455894-2455948)
chr6 (19-69)||(4420556-4420606)
chr6 (162-200)||(10016729-10016767)
chr6 (18-92)||(20671923-20671997)
chr6 (22-92)||(24670359-24670429)
chr6 (19-69)||(32975917-32975967)
chr6 (24-92)||(2112144-2112212)
chr6 (19-92)||(9093614-9093687)
chr6 (24-77)||(9833170-9833223)
chr6 (164-209)||(31672446-31672491)
chr6 (19-60)||(34544540-34544581)
chr6 (20-92)||(415244-415316)
chr6 (19-59)||(507159-507199)
chr6 (26-90)||(2027466-2027530)
chr6 (22-70)||(2206532-2206580)
chr6 (159-195)||(3112175-3112211)
chr6 (19-59)||(10749319-10749358)
[»] scaffold0024 (1 HSPs)
scaffold0024 (19-92)||(27515-27588)
[»] chr1 (36 HSPs)
chr1 (19-89)||(15360833-15360903)
chr1 (22-92)||(49517012-49517082)
chr1 (19-92)||(29007774-29007847)
chr1 (21-88)||(43333640-43333707)
chr1 (18-60)||(49692140-49692182)
chr1 (23-92)||(5756744-5756813)
chr1 (152-201)||(6231741-6231790)
chr1 (31-92)||(7218132-7218193)
chr1 (19-92)||(17269189-17269262)
chr1 (31-80)||(17631171-17631220)
chr1 (148-205)||(35017674-35017731)
chr1 (19-92)||(36151563-36151636)
chr1 (19-76)||(37818403-37818460)
chr1 (19-84)||(48830142-48830207)
chr1 (24-92)||(5421978-5422046)
chr1 (169-208)||(1662686-1662725)
chr1 (21-92)||(19462824-19462894)
chr1 (21-84)||(45999354-45999417)
chr1 (19-92)||(17422996-17423070)
chr1 (18-68)||(23895274-23895324)
chr1 (162-212)||(24279855-24279905)
chr1 (22-92)||(49557083-49557153)
chr1 (19-92)||(4200168-4200241)
chr1 (47-92)||(4215339-4215384)
chr1 (23-92)||(6074417-6074486)
chr1 (19-92)||(10854672-10854745)
chr1 (26-71)||(14737784-14737829)
chr1 (19-84)||(20713595-20713660)
chr1 (19-60)||(36641814-36641855)
chr1 (27-84)||(44936656-44936713)
chr1 (19-92)||(49888706-49888779)
chr1 (19-60)||(50319231-50319272)
chr1 (162-194)||(2832078-2832110)
chr1 (46-90)||(3319992-3320036)
chr1 (19-71)||(4338588-4338640)
chr1 (20-92)||(37842413-37842485)
[»] chr2 (40 HSPs)
chr2 (19-92)||(4550716-4550789)
chr2 (19-92)||(10143111-10143184)
chr2 (19-92)||(13630339-13630412)
chr2 (19-92)||(25609735-25609808)
chr2 (19-92)||(28803564-28803637)
chr2 (19-90)||(29430695-29430765)
chr2 (34-85)||(33256694-33256745)
chr2 (19-84)||(9551518-9551583)
chr2 (19-56)||(10150694-10150731)
chr2 (19-92)||(17952759-17952832)
chr2 (19-92)||(35755560-35755633)
chr2 (19-90)||(31740019-31740091)
chr2 (48-92)||(37766766-37766810)
chr2 (19-92)||(11513840-11513910)
chr2 (19-92)||(1899839-1899910)
chr2 (46-92)||(5043618-5043664)
chr2 (162-200)||(11514002-11514040)
chr2 (19-69)||(27288572-27288622)
chr2 (19-69)||(33576675-33576725)
chr2 (46-92)||(33942116-33942162)
chr2 (22-92)||(43199356-43199426)
chr2 (31-92)||(914032-914093)
chr2 (19-88)||(3423830-3423899)
chr2 (19-92)||(3673746-3673819)
chr2 (19-92)||(5133711-5133784)
chr2 (22-71)||(5511507-5511556)
chr2 (19-92)||(11344342-11344415)
chr2 (20-61)||(15173466-15173507)
chr2 (140-201)||(18234502-18234563)
chr2 (19-84)||(18962104-18962169)
chr2 (31-92)||(37474707-37474768)
chr2 (19-60)||(40672886-40672927)
chr2 (21-77)||(3458598-3458654)
chr2 (19-87)||(6926505-6926572)
chr2 (166-198)||(14302932-14302964)
chr2 (19-91)||(25790065-25790137)
chr2 (19-71)||(32098387-32098439)
chr2 (162-194)||(39567948-39567980)
chr2 (19-59)||(44119723-44119763)
chr2 (24-92)||(44439418-44439486)
[»] chr8 (40 HSPs)
chr8 (23-85)||(26820142-26820204)
chr8 (25-85)||(33209285-33209345)
chr8 (149-205)||(2213501-2213557)
chr8 (24-84)||(6918245-6918305)
chr8 (21-92)||(1470914-1470985)
chr8 (119-194)||(1664432-1664507)
chr8 (19-90)||(10222845-10222916)
chr8 (19-92)||(7714181-7714254)
chr8 (19-92)||(12361131-12361204)
chr8 (31-92)||(27728079-27728140)
chr8 (19-80)||(35534931-35534992)
chr8 (25-70)||(40728498-40728543)
chr8 (19-92)||(42597340-42597413)
chr8 (32-92)||(2093231-2093291)
chr8 (19-59)||(4558737-4558777)
chr8 (162-194)||(9700107-9700139)
chr8 (16-92)||(13459582-13459657)
chr8 (24-92)||(38561670-38561738)
chr8 (21-92)||(16210944-16211015)
chr8 (25-92)||(30040604-30040670)
chr8 (19-77)||(5071040-5071098)
chr8 (30-92)||(10417285-10417347)
chr8 (162-200)||(16162866-16162904)
chr8 (19-77)||(26215435-26215493)
chr8 (140-194)||(31884872-31884926)
chr8 (19-92)||(35298535-35298609)
chr8 (163-204)||(7646040-7646080)
chr8 (19-92)||(28769397-28769470)
chr8 (19-60)||(29699193-29699234)
chr8 (140-189)||(39049356-39049405)
chr8 (141-194)||(39881653-39881706)
chr8 (55-92)||(43704436-43704473)
chr8 (19-59)||(1929990-1930030)
chr8 (22-90)||(3537091-3537159)
chr8 (19-67)||(11119082-11119130)
chr8 (19-71)||(12224978-12225030)
chr8 (22-70)||(31315533-31315581)
chr8 (24-92)||(31862437-31862505)
chr8 (20-92)||(31884534-31884606)
chr8 (151-195)||(45098904-45098948)
[»] chr3 (52 HSPs)
chr3 (22-92)||(12923383-12923453)
chr3 (21-92)||(48397587-48397658)
chr3 (19-92)||(20192664-20192737)
chr3 (19-92)||(37788800-37788872)
chr3 (19-92)||(40122811-40122883)
chr3 (48-92)||(19679386-19679430)
chr3 (140-200)||(25459556-25459616)
chr3 (19-91)||(36101507-36101579)
chr3 (19-91)||(36139817-36139889)
chr3 (19-90)||(32703077-32703148)
chr3 (22-92)||(24235741-24235811)
chr3 (18-92)||(48364937-48365011)
chr3 (24-82)||(49586984-49587042)
chr3 (19-92)||(48323760-48323833)
chr3 (19-92)||(49772726-49772799)
chr3 (20-92)||(22214739-22214811)
chr3 (163-195)||(23326122-23326154)
chr3 (24-92)||(24887341-24887409)
chr3 (19-83)||(25258710-25258774)
chr3 (22-98)||(29771751-29771827)
chr3 (168-200)||(53762320-53762352)
chr3 (37-92)||(1816540-1816595)
chr3 (25-92)||(10101534-10101601)
chr3 (25-92)||(10212459-10212526)
chr3 (20-82)||(1395611-1395673)
chr3 (159-209)||(19679245-19679295)
chr3 (43-93)||(20807063-20807113)
chr3 (162-200)||(44014724-44014762)
chr3 (162-204)||(49465859-49465901)
chr3 (18-55)||(2304336-2304373)
chr3 (18-91)||(2865718-2865790)
chr3 (47-92)||(3467446-3467491)
chr3 (19-84)||(8007761-8007826)
chr3 (24-77)||(20143869-20143921)
chr3 (24-77)||(23269268-23269320)
chr3 (19-60)||(24605106-24605147)
chr3 (19-84)||(30669036-30669101)
chr3 (24-85)||(32095256-32095317)
chr3 (19-76)||(38462220-38462277)
chr3 (24-61)||(48588609-48588646)
chr3 (19-59)||(2128342-2128382)
chr3 (19-71)||(3182441-3182493)
chr3 (21-77)||(22232767-22232823)
chr3 (19-51)||(23815992-23816024)
chr3 (19-59)||(35394792-35394832)
chr3 (24-92)||(36646440-36646508)
chr3 (169-209)||(36887639-36887679)
chr3 (162-194)||(40240753-40240785)
chr3 (19-71)||(41028930-41028982)
chr3 (149-209)||(41057248-41057308)
chr3 (162-194)||(51929847-51929879)
chr3 (31-91)||(54965457-54965517)
[»] chr4 (38 HSPs)
chr4 (31-92)||(24929444-24929505)
chr4 (18-92)||(26883933-26884007)
chr4 (23-92)||(49219082-49219151)
chr4 (19-86)||(11389465-11389532)
chr4 (19-82)||(19422357-19422420)
chr4 (20-92)||(44019463-44019537)
chr4 (19-81)||(3176191-3176253)
chr4 (19-92)||(8422897-8422968)
chr4 (22-88)||(19691349-19691415)
chr4 (22-88)||(19701934-19702000)
chr4 (19-84)||(30024639-30024704)
chr4 (19-92)||(30207629-30207701)
chr4 (19-92)||(42321937-42322010)
chr4 (19-92)||(50745939-50746012)
chr4 (19-84)||(51098254-51098319)
chr4 (19-71)||(4798638-4798690)
chr4 (21-77)||(31038940-31038996)
chr4 (162-201)||(1075564-1075603)
chr4 (31-90)||(4071833-4071892)
chr4 (22-85)||(54325102-54325165)
chr4 (19-73)||(20907112-20907166)
chr4 (21-71)||(23815311-23815361)
chr4 (148-194)||(28615426-28615472)
chr4 (19-65)||(51044544-51044590)
chr4 (19-71)||(4191678-4191731)
chr4 (19-60)||(9680603-9680644)
chr4 (46-91)||(13949903-13949948)
chr4 (19-92)||(22471270-22471343)
chr4 (31-92)||(25434518-25434579)
chr4 (19-84)||(30338658-30338723)
chr4 (19-84)||(44119228-44119293)
chr4 (19-59)||(6364088-6364128)
chr4 (149-193)||(43824376-43824420)
chr4 (21-77)||(44319891-44319946)
chr4 (19-71)||(47970257-47970309)
chr4 (162-202)||(47970402-47970442)
chr4 (23-92)||(53626717-53626788)
chr4 (32-92)||(55870399-55870459)
[»] chr7 (37 HSPs)
chr7 (20-92)||(44241800-44241871)
chr7 (35-92)||(9527148-9527205)
chr7 (19-92)||(48157178-48157251)
chr7 (20-92)||(5006567-5006639)
chr7 (37-92)||(45777229-45777284)
chr7 (22-92)||(3802197-3802267)
chr7 (19-77)||(27121659-27121717)
chr7 (19-92)||(1417203-1417276)
chr7 (19-92)||(3610798-3610871)
chr7 (19-92)||(30496643-30496716)
chr7 (19-92)||(33894562-33894634)
chr7 (19-92)||(36874023-36874096)
chr7 (24-77)||(39591540-39591593)
chr7 (19-92)||(45813238-45813311)
chr7 (48-92)||(17989081-17989125)
chr7 (159-194)||(40598417-40598452)
chr7 (19-57)||(1432060-1432098)
chr7 (19-89)||(3501027-3501097)
chr7 (152-194)||(17988965-17989007)
chr7 (19-77)||(35536046-35536104)
chr7 (19-77)||(45593792-45593850)
chr7 (26-92)||(47004033-47004099)
chr7 (24-86)||(47467855-47467917)
chr7 (31-92)||(2727418-2727479)
chr7 (163-208)||(2895343-2895388)
chr7 (19-92)||(11208388-11208461)
chr7 (26-59)||(22355850-22355883)
chr7 (19-84)||(23918896-23918961)
chr7 (19-92)||(27481352-27481425)
chr7 (19-84)||(28165030-28165095)
chr7 (19-92)||(47527991-47528064)
chr7 (19-92)||(49060479-49060552)
chr7 (162-194)||(529468-529500)
chr7 (19-71)||(7244641-7244693)
chr7 (162-194)||(8094412-8094444)
chr7 (39-91)||(31338467-31338519)
chr7 (169-201)||(40252048-40252080)
[»] chr5 (43 HSPs)
chr5 (18-82)||(29116998-29117062)
chr5 (19-87)||(35135725-35135793)
chr5 (31-92)||(14295457-14295518)
chr5 (19-92)||(19177418-19177491)
chr5 (31-92)||(28586824-28586885)
chr5 (19-92)||(38831514-38831587)
chr5 (20-92)||(37690695-37690767)
chr5 (25-92)||(9703298-9703365)
chr5 (19-96)||(9927524-9927601)
chr5 (159-200)||(11153372-11153413)
chr5 (19-92)||(18704094-18704166)
chr5 (31-88)||(35960365-35960421)
chr5 (27-92)||(37526257-37526322)
chr5 (27-92)||(37588418-37588483)
chr5 (19-59)||(11054125-11054165)
chr5 (150-198)||(11095423-11095471)
chr5 (19-91)||(19113176-19113248)
chr5 (20-71)||(985573-985624)
chr5 (19-92)||(26209471-26209543)
chr5 (24-82)||(10537743-10537801)
chr5 (150-200)||(10771814-10771864)
chr5 (162-200)||(11615580-11615618)
chr5 (46-92)||(32059647-32059693)
chr5 (46-92)||(36539712-36539758)
chr5 (19-77)||(37063147-37063205)
chr5 (153-195)||(41112829-41112871)
chr5 (46-87)||(583836-583877)
chr5 (19-60)||(7096217-7096258)
chr5 (39-92)||(10272489-10272542)
chr5 (19-92)||(12425510-12425583)
chr5 (19-84)||(33459001-33459066)
chr5 (19-84)||(39128578-39128643)
chr5 (19-92)||(39257445-39257517)
chr5 (31-84)||(42569046-42569099)
chr5 (30-70)||(1943201-1943241)
chr5 (36-92)||(2933709-2933765)
chr5 (162-206)||(3290716-3290760)
chr5 (19-59)||(8481157-8481197)
chr5 (19-59)||(12407752-12407792)
chr5 (24-92)||(13244540-13244607)
chr5 (37-85)||(19369270-19369318)
chr5 (19-59)||(40048371-40048411)
chr5 (20-92)||(40097462-40097533)
[»] scaffold0199 (1 HSPs)
scaffold0199 (119-194)||(6873-6948)
[»] scaffold0110 (1 HSPs)
scaffold0110 (31-93)||(4280-4343)
[»] scaffold0590 (1 HSPs)
scaffold0590 (19-65)||(1159-1205)
[»] scaffold0275 (1 HSPs)
scaffold0275 (19-65)||(2770-2816)
[»] scaffold0508 (1 HSPs)
scaffold0508 (19-92)||(9833-9906)
[»] scaffold0221 (1 HSPs)
scaffold0221 (20-77)||(20235-20292)
[»] scaffold0103 (1 HSPs)
scaffold0103 (20-84)||(51508-51572)


Alignment Details
Target: chr6 (Bit Score: 255; Significance: 1e-142; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 34429822 - 34429560
Alignment:
Q  18 attatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgttttataatgagattgttgatataagctg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34429822 attatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgttttataatgagattgttgatataagctg 34429723  T
Q  118 caaaccacttatggacgtgtcgtaagcttttccaaacaatatcgcaagtgtttatgctagtagataagctcaaataaaccaatttaaataggaccaatgc 217  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34429722 caaaccacttatggacgtgtcataagcttttccaaacaatatctcaagtgtttatgctagtagataagctcaaataaaccaatttaaataggaccaatgc 34429623  T
Q  218 aaatcgaaaaatgctaagattttctggttgagttttgtcctctaattgatcattgctcctatg 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34429622 aaatcgaaaaatgctaagattttctggttgagttttgtcctctaattgatcattgctcctatg 34429560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 24836330 - 24836262
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagtt 87  Q
    ||||||||||||||||||||||| || ||||||||||||||| || ||||||| |||||||||||||||    
T  24836330 ttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataaactataagtt 24836262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 10452491 - 10452419
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgttt 91  Q
    ||||||||||| ||||||||||| || | |||||||||| || |||| ||||| ||||| |||||||||||||    
T  10452491 ttatgtataagctatttctataacaaaatataaaataaaatcaaactattttcatataagctataagttgttt 10452419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 2514641 - 2514687
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaact 65  Q
    ||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  2514641 ttatgtataagctatttctataataaaagataaaataaagtcaaact 2514687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 3204658 - 3204600
Alignment:
Q  34 ttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||| ||| || |||||||    
T  3204658 ttctataataaaagataaaataaagtcgaactgttttcatataagctagaaattgtttt 3204600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 32843446 - 32843412
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaa 53  Q
    |||||||||||||||||||||||||||||||||||    
T  32843446 ttatgtataagttatttctataataagagataaaa 32843412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 4006653 - 4006726
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||| ||||| ||||||||||| ||  |||||||||||||| || ||||||  ||||| ||||||||||||||    
T  4006653 ttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgtttt 4006726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 5550083 - 5550144
Alignment:
Q  31 tatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||| |||||||||||||| |||||||| || ||||||| ||||| ||||||| ||||||    
T  5550083 tatttcgataataagagataacataaagtcaaattgttttcatataagctataagctgtttt 5550144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 6310355 - 6310282
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||   |||||||||| || |||| || |||||||||| ||||||| ||||| ||||||||||||||    
T  6310355 ttatgtataatcaatttctataacaaaagatgaagtaaagtctaattgttttcatataagctataagttgtttt 6310282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 29274360 - 29274295
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    ||||||||||| ||||||||||  || ||||||||||||||| || ||||||| ||||| ||||||    
T  29274360 ttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataa 29274295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 194
Target Start/End: Original strand, 30784612 - 30784681
Alignment:
Q  125 cttatggacgtgtcgtaagcttttccaaacaatatcgcaagtgtttatgctagtagataagctcaaataa 194  Q
    ||||||||| | || |||||| | |||| ||||||| ||| |||||||| ||||||||||||||||||||    
T  30784612 cttatggacatttcataagctctcccaatcaatatcccaactgtttatgatagtagataagctcaaataa 30784681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 33068692 - 33068640
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttc 71  Q
    ||||||||||||||||||||||| || |||||||||||  || ||||||||||    
T  33068692 ttatgtataagttatttctataacaaaagataaaataatatcaaactgttttc 33068640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 323753 - 323808
Alignment:
Q  22 tgtataagttatttctataataagagataaaataaagtctaactgttttcttataa 77  Q
    |||||||| |||||||||| ||| |||||||||||| || |||||||||| |||||    
T  323753 tgtataagctatttctatattaaaagataaaataaattcaaactgttttcatataa 323808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 733140 - 733101
Alignment:
Q  163 aagtgtttatgctagtagataagctcaaataaaccaattt 202  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  733140 aagtgcttatggtagtagataagctcaaataaaccaattt 733101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 8420328 - 8420257
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtt 90  Q
    ||||||| ||||||||||| ||||||  |||||||||||||| |||||| ||  |||||| |||||| ||||    
T  8420328 ttatgtacaagttatttctttaataaatgataaaataaagtcaaactgtgtttatataaaatataagctgtt 8420257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 194
Target Start/End: Original strand, 12111070 - 12111105
Alignment:
Q  159 tcgcaagtgtttatgctagtagataagctcaaataa 194  Q
    ||||||||| ||||||||||||||||||||||||||    
T  12111070 tcgcaagtgcttatgctagtagataagctcaaataa 12111105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 781326 - 781364
Alignment:
Q  21 atgtataagttatttctataataagagataaaataaagt 59  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  781326 atgtataagctatttctataataaaagataaaataaagt 781364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 1402942 - 1403008
Alignment:
Q  26 taagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||| ||||||||||| || ||||||||||||||  |||| ||||| ||||| |||||| |||||||    
T  1402942 taagctatttctataacaaaagataaaataaagttaaactattttcatataagctataaattgtttt 1403008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 2455894 - 2455948
Alignment:
Q  140 taagcttttccaaacaatatcgcaagtgtttatgctagtagataagctcaaataa 194  Q
    |||||| ||| ||||||| ||||||||| ||||||  ||||||||||||||||||    
T  2455894 taagctcttctaaacaatctcgcaagtgcttatgccggtagataagctcaaataa 2455948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 4420556 - 4420606
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttt 69  Q
    ||||||||||| || |||||||| || ||||||||||||||| ||||||||    
T  4420556 ttatgtataagctacttctataacaaaagataaaataaagtcaaactgttt 4420606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 10016729 - 10016767
Alignment:
Q  162 caagtgtttatgctagtagataagctcaaataaaccaat 200  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  10016729 caagtgtttatgcctgtagataagctcaaataaaccaat 10016767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 20671997 - 20671923
Alignment:
Q  18 attatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||| |||||||| |  || ||||||||||||||| || ||||||| ||||| || ||| |||||||    
T  20671997 attatgtataagctatttctagatcaaaagataaaataaagtcaaattgttttcgtataagctttaaattgtttt 20671923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 24670359 - 24670429
Alignment:
Q  22 tgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||| ||||||| ||| || |  |||||||||||| ||||||||| |||||| || |||||||||||    
T  24670359 tgtataagatatttctgtaacaaaaagtaaaataaagtccaactgtttttttataagctttaagttgtttt 24670429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 32975917 - 32975967
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttt 69  Q
    ||||||||||||||||||| ||| || | ||||||||||||| ||||||||    
T  32975917 ttatgtataagttatttctgtaacaaaatataaaataaagtcaaactgttt 32975967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 2112144 - 2112212
Alignment:
Q  24 tataagttatttctataataaga-gataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||| ||||||||||||| | |||||||||||||  || ||||| | ||||||||||||||||||||    
T  2112144 tataagtcatttctataataaaaagataaaataaagttaaattgttt-catataaactataagttgtttt 2112212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 9093687 - 9093614
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||| ||||| ||||||||||  || ||||||||||||||  || ||||||| ||||| ||||||| ||||||    
T  9093687 ttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgtttt 9093614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 9833223 - 9833170
Alignment:
Q  24 tataagttatttctataataagagataaaataaagtctaactgttttcttataa 77  Q
    |||||| ||||||||| | || | ||||||||||||| ||||||||||||||||    
T  9833223 tataagatatttctattacaataaataaaataaagtcaaactgttttcttataa 9833170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 31672491 - 31672446
Alignment:
Q  164 agtgtttatgctagtagataagctcaaataaaccaatttaaatagg 209  Q
    ||||||||||  ||||||||| |||||||||||||||| |||||||    
T  31672491 agtgtttatgtgagtagataaactcaaataaaccaattcaaatagg 31672446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 34544581 - 34544540
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtc 60  Q
    ||||||||||||||||||||||| || ||||||| |||||||    
T  34544581 ttatgtataagttatttctataacaaaagataaactaaagtc 34544540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 415244 - 415316
Alignment:
Q  20 tatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||| ||||||||||||||| |   ||||||||| |||||  || ||||||| ||||| ||||||||||||||    
T  415244 tatgaataagttatttctattacgcgagataaaacaaagttaaattgttttcgtataagctataagttgtttt 415316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 507159 - 507199
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagt 59  Q
    |||||||||| |||||||||||| || ||||||||||||||    
T  507159 ttatgtataaattatttctataacaaaagataaaataaagt 507199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 2027530 - 2027466
Alignment:
Q  26 taagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtt 90  Q
    |||| ||||| ||||| || ||||||||||||||| |||| ||||| ||||| ||||||| ||||    
T  2027530 taagctatttttataacaaaagataaaataaagtcaaactattttcatataacctataagctgtt 2027466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 2206532 - 2206580
Alignment:
Q  22 tgtataagttatttctataataagagataaaataaagtctaactgtttt 70  Q
    |||||||||||||| ||||| || |||||||||||||| ||| ||||||    
T  2206532 tgtataagttatttttataacaaaagataaaataaagtataattgtttt 2206580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 3112211 - 3112175
Alignment:
Q  159 tcgcaagtgtttatgctagtagataagctcaaataaa 195  Q
    |||||| |||||| |||||||||||||||||||||||    
T  3112211 tcgcaaatgtttacgctagtagataagctcaaataaa 3112175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 10749358 - 10749319
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagt 59  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  10749358 ttatgtataagt-atttctataataaaagataaaataaagt 10749319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 27515 - 27588
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||||||||||||| |  ||||||||||||||| || ||||||| ||||||||||||||||||||    
T  27515 ttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgtttt 27588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 15360833 - 15360903
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgt 89  Q
    |||||||| |||||||||||||| || ||||||||||||||| |||||||||| ||||| |||||||||||    
T  15360833 ttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagttgt 15360903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 49517012 - 49517082
Alignment:
Q  22 tgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||||||||||| || ||||||||||||||| || ||||||| | ||| ||||||| ||||||    
T  49517012 tgtataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgtttt 49517082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 29007847 - 29007774
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||| |||||||||||||||| || ||| ||| ||||||| |||| ||||| ||||| ||||||||||||||    
T  29007847 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaactattttcatataagctataagttgtttt 29007774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 43333640 - 43333707
Alignment:
Q  21 atgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttg 88  Q
    |||||||||||||||||| || || | ||||||||||||| ||||| |||| ||||| ||||||||||    
T  43333640 atgtataagttatttctagaagaaaatataaaataaagtcgaactggtttcatataagctataagttg 43333707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 49692182 - 49692140
Alignment:
Q  18 attatgtataagttatttctataataagagataaaataaagtc 60  Q
    |||||||||||||||||||||||||||  ||||||||||||||    
T  49692182 attatgtataagttatttctataataaaggataaaataaagtc 49692140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 5756813 - 5756744
Alignment:
Q  23 gtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||| ||||||||||| || |||| | |||||||  |||||||||| |||||| |||||||||||||    
T  5756813 gtataagctatttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgtttt 5756744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 6231790 - 6231741
Alignment:
Q  152 aacaatatcgcaagtgtttatgctagtagataagctcaaataaaccaatt 201  Q
    |||||| || ||| ||||||||||||||||||| ||||||||||||||||    
T  6231790 aacaatctcacaaatgtttatgctagtagataacctcaaataaaccaatt 6231741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 7218193 - 7218132
Alignment:
Q  31 tatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||| ||||||| || |||||||||||| || ||||||| ||||| ||||||||||||||    
T  7218193 tatttccataataaaaggtaaaataaagtcaaattgttttcatataagctataagttgtttt 7218132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 17269189 - 17269262
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||||||||||| || || ||  ||||||||||| || ||||||| ||||| | ||||||||||||    
T  17269189 ttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgtttt 17269262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 17631220 - 17631171
Alignment:
Q  31 tatttctataataagagataaaataaagtctaactgttttcttataaact 80  Q
    ||||||||||| || |||||||||||||||||||||||||| | ||||||    
T  17631220 tatttctataacaaaagataaaataaagtctaactgttttcatgtaaact 17631171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 35017674 - 35017731
Alignment:
Q  148 tccaaacaatatcgcaagtgtttatgctagtagataagctcaaataaaccaatttaaa 205  Q
    |||||||||| || ||||||||||||| | ||||||||||||||||| ||||| ||||    
T  35017674 tccaaacaatctcacaagtgtttatgccaatagataagctcaaataagccaatctaaa 35017731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 36151636 - 36151563
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| |||||| |||| || ||||||||||||||| || ||||||| |||||  ||||| |||||||    
T  36151636 ttatgtataagctatttcaataacaaaagataaaataaagtcaaattgttttcgtataagttataaattgtttt 36151563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 37818403 - 37818460
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttata 76  Q
    ||||||||||||||||||||||| |||||||||||  ||||| |||| ||||| ||||    
T  37818403 ttatgtataagttatttctataacaagagataaaacgaagtcaaactattttcgtata 37818460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 48830207 - 48830142
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    ||||||||||||||||||||| |  | ||||||||||||||| |||| ||||| ||||| ||||||    
T  48830207 ttatgtataagttatttctattaccaaagataaaataaagtcaaactattttcatataagctataa 48830142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 5422046 - 5421978
Alignment:
Q  24 tataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||| |||||| || | || |||||||||| |||| || ||||||||||||| ||||||||||||||    
T  5422046 tataagctatttccatgacaaaagataaaatatagtcaaattgttttcttataagctataagttgtttt 5421978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 1662686 - 1662725
Alignment:
Q  169 ttatgctagtagataagctcaaataaaccaatttaaatag 208  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  1662686 ttatgctagtagataagctcaaataagccaatctaaatag 1662725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 19462894 - 19462824
Alignment:
Q  21 atgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||| ||||||||||||||| |||| || |||||||||| ||| |||||| |||||||| ||| |||||||    
T  19462894 atgtacaagttatttctataacaagatat-aaataaagtcaaacagttttcatataaactgtaaattgtttt 19462824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 45999417 - 45999354
Alignment:
Q  21 atgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    ||||||||| ||||||||||| || |||||| |||||||| ||||| |||| ||||| ||||||    
T  45999417 atgtataagctatttctataacaaaagataagataaagtcaaactgctttcatataagctataa 45999354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 17423070 - 17422996
Alignment:
Q  19 ttatgtataagttatttctataataaga-gataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| | ||||||||| || | |||||||||||||| | ||| |||| ||||| ||||||||||||||    
T  17423070 ttatgtataagctttttctataacaaaacgataaaataaagtcaagctgatttcatataagctataagttgtttt 17422996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 23895274 - 23895324
Alignment:
Q  18 attatgtataagttatttctataataagagataaaataaagtctaactgtt 68  Q
    |||||||||||| ||||||||||| || |||||||||||| || |||||||    
T  23895274 attatgtataagctatttctataacaaaagataaaataaattcaaactgtt 23895324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 24279855 - 24279905
Alignment:
Q  162 caagtgtttatgctagtagataagctcaaataaaccaatttaaataggacc 212  Q
    |||||||||||||||||| ||||| ||||||||  |||| |||||||||||    
T  24279855 caagtgtttatgctagtaaataagttcaaataagacaatctaaataggacc 24279905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 49557083 - 49557153
Alignment:
Q  22 tgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||||||||||| || ||||||||||||||  ||  || ||| | ||| ||||||||||||||    
T  49557083 tgtataagttatttctataacaaaagataaaataaagttaaatagtattcatttaagctataagttgtttt 49557153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 4200168 - 4200241
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||| |||||||||||| ||||| || ||||||||||||||| |  ||||||| ||||| |||||  |||||||    
T  4200168 ttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctatatattgtttt 4200241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 4215339 - 4215384
Alignment:
Q  47 gataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||||| |||||||||| |||||||||| ||| |||||    
T  4215339 gataaaataaagtcaaactgttttcatataaactatgagtcgtttt 4215384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 6074417 - 6074486
Alignment:
Q  23 gtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||| ||||||||||| || |||| | |||||||  |||||||||| ||||| |||| |||||||||    
T  6074417 gtataagctatttctataacaaaagatgatataaagttaaactgttttcatataagctatgagttgtttt 6074486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 10854672 - 10854745
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||| |||||||||||||  ||||  ||||||||||||||| ||||| |||  ||||| ||||| ||||||||    
T  10854672 ttatgaataagttatttctgaaatacaagataaaataaagtcaaactgattttgtataatctatatgttgtttt 10854745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 14737829 - 14737784
Alignment:
Q  26 taagttatttctataataagagataaaataaagtctaactgttttc 71  Q
    |||||||||||||||| || ||||||||||||||| || |||||||    
T  14737829 taagttatttctataacaaaagataaaataaagtcaaattgttttc 14737784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 20713595 - 20713660
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    ||||||||||||||||||||||| ||  ||||| |||||||  |||||||||  ||||||| ||||    
T  20713595 ttatgtataagttatttctataacaatcgataatataaagtacaactgtttttatataaacaataa 20713660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 36641814 - 36641855
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtc 60  Q
    |||| |||||||||||||||||| || |||||||||||||||    
T  36641814 ttatatataagttatttctataacaaaagataaaataaagtc 36641855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 44936713 - 44936656
Alignment:
Q  27 aagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    ||||||||||||||| || |||||| |||||||| |||| ||||| ||||| ||||||    
T  44936713 aagttatttctataacaaaagataagataaagtcaaactattttcatataagctataa 44936656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 49888706 - 49888779
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| ||||||| |   || |||||||||||||| ||| ||||||| ||||| |||| |||||||||    
T  49888706 ttatgtataagctatttctttggaaaaagataaaataaagtttaattgttttcgtataagctattagttgtttt 49888779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 50319231 - 50319272
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtc 60  Q
    ||||||||||| ||||||||||| || |||||||||||||||    
T  50319231 ttatgtataagctatttctataacaaaagataaaataaagtc 50319272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 2832078 - 2832110
Alignment:
Q  162 caagtgtttatgctagtagataagctcaaataa 194  Q
    |||||| ||||||||||||||||||||||||||    
T  2832078 caagtgcttatgctagtagataagctcaaataa 2832110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 3320036 - 3319992
Alignment:
Q  46 agataaaataaagtctaactgttttcttataaactataagttgtt 90  Q
    ||||||||||||||  ||||| |||| ||||||||||||||||||    
T  3320036 agataaaataaagtagaactggtttcatataaactataagttgtt 3319992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 4338588 - 4338640
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttc 71  Q
    ||||||||||||||| |||| || |  ||||||||||||||| ||||||||||    
T  4338588 ttatgtataagttatgtctagaacagaagataaaataaagtcaaactgttttc 4338640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 37842485 - 37842413
Alignment:
Q  20 tatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||| ||||||||||  || |||| |||||||||  |||||| |||  |||| ||||||||||||||    
T  37842485 tatgtataagctatttctatagcaaaagatgaaataaagttaaactgtgttcgaataagctataagttgtttt 37842413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 4550716 - 4550789
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||| |||| ||||||| ||||||||||| ||| | |||||||| ||||||||||||||||||||    
T  4550716 ttatgtataagttgtttccataataaaagataaaataacgtcaagctgttttcatataaactataagttgtttt 4550789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 10143111 - 10143184
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||||||||||||| || ||||||||| ||||| |||||||||  ||||| ||||||||| ||||    
T  10143111 ttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagttttttt 10143184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 13630412 - 13630339
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||||||||| ||  || |||||| |||||||| |||||||||| ||||| | ||||||||||||    
T  13630412 ttatgtataagttatttctctatcaaaagataagataaagtcaaactgttttcatataatcaataagttgtttt 13630339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 25609735 - 25609808
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| ||||||||||| || ||||||||||||||| |  | ||||| ||||| ||||||||||||||    
T  25609735 ttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagctataagttgtttt 25609808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 28803637 - 28803564
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||| ||||||||||||| |||| || ||||||||||||||| ||||| |||| ||||| ||| ||||||||||    
T  28803637 ttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagctacaagttgtttt 28803564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 29430695 - 29430765
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtt 90  Q
    ||||||||||| ||||||||||| || || |||| ||||||| |||||||||||||||| ||||||| ||||    
T  29430695 ttatgtataagctatttctataacaaaagttaaa-taaagtcaaactgttttcttataagctataagctgtt 29430765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 33256694 - 33256745
Alignment:
Q  34 ttctataataagagataaaataaagtctaactgttttcttataaactataag 85  Q
    |||||||| || ||||||||||||||| |||||||||| |||||||||||||    
T  33256694 ttctataacaatagataaaataaagtcaaactgttttcatataaactataag 33256745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 9551518 - 9551583
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    ||||||||||| ||||| ||||||||   ||||||||||||| |||||||||  ||||||||||||    
T  9551518 ttatgtataagctatttttataataaattataaaataaagtcaaactgtttttgtataaactataa 9551583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 10150694 - 10150731
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataa 56  Q
    |||||||||||||||||||||||||| |||||||||||    
T  10150694 ttatgtataagttatttctataataaaagataaaataa 10150731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 17952832 - 17952759
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||| |||||| ||||||||||| || ||||||||||||||| |||| ||||| ||||| ||| ||| ||||||    
T  17952832 ttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgtttt 17952759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 35755633 - 35755560
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| |||||||||||| | | | ||||||||||| || ||||||| | ||| ||||||||||||||    
T  35755633 ttatgtataagctatttctataatcaaatagaaaataaagtcaaattgttttcatgtaagctataagttgtttt 35755560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 31740091 - 31740019
Alignment:
Q  19 ttatgtataa-gttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtt 90  Q
    |||||||||| | |||||||||||  | ||||||||||||||| |||| ||||| ||||| ||||||||||||    
T  31740091 ttatgtataaagctatttctataactaaagataaaataaagtcaaactattttcatataagctataagttgtt 31740019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 37766766 - 37766810
Alignment:
Q  48 ataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||| || ||||||| ||||||||||||||||||||    
T  37766766 ataaaataaagtcaaaatgttttcgtataaactataagttgtttt 37766810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 11513840 - 11513910
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||||||| |   || || ||||||||||||||| || ||||||| ||||| ||||||||||||||    
T  11513840 ttatgtataagttattac---aacaaaagataaaataaagtcaaattgttttcatataagctataagttgtttt 11513910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 1899839 - 1899910
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||  |||||||||||||   |||||||||||||  | | ||||||||||| ||||||||||||||    
T  1899839 ttatgtataagcgatttctataataaagtataaaataaagtc--attattttcttataagctataagttgtttt 1899910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 5043664 - 5043618
Alignment:
Q  46 agataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||||| |||||||||| ||||| ||| ||||||||||    
T  5043664 agataaaataaagtcaaactgttttcatataagctagaagttgtttt 5043618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 11514002 - 11514040
Alignment:
Q  162 caagtgtttatgctagtagataagctcaaataaaccaat 200  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  11514002 caagtgcttatgctagtagataatctcaaataaaccaat 11514040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 27288572 - 27288622
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttt 69  Q
    ||||||| ||||| |||||||||||| |||||||||||| || ||||||||    
T  27288572 ttatgtaaaagttgtttctataataaaagataaaataaaatcaaactgttt 27288622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 33576725 - 33576675
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttt 69  Q
    ||||||||| ||||||||||||| || ||||| ||||||||| ||||||||    
T  33576725 ttatgtataggttatttctataacaaaagatacaataaagtcaaactgttt 33576675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 33942116 - 33942162
Alignment:
Q  46 agataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||||| |||||||||| | ||| ||||||||||||||    
T  33942116 agataaaataaagtcaaactgttttcatgtaagctataagttgtttt 33942162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 43199356 - 43199426
Alignment:
Q  22 tgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||||||| || || ||||||||||||||  || | | ||| ||||| ||||||||||||||    
T  43199356 tgtataagttatttctacaacaaaagataaaataaagttaaattatcttcgtataagctataagttgtttt 43199426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 914032 - 914093
Alignment:
Q  31 tatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| || |||||||||||| | | | |||||||||||||||||| | |||||||    
T  914032 tatttctataacaaaagataaaataaaatttgattgttttcttataaactatgatttgtttt 914093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 3423899 - 3423830
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttg 88  Q
    ||||||||||||||||| | ||  || ||||||||||||||| || | ||||| ||||| ||||||||||    
T  3423899 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 3423830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 3673746 - 3673819
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||| |||||||||||||| || | ||||||||||||  || ||||||| |||||  |||||||| ||||    
T  3673746 ttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatataagttataagttttttt 3673819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 5133711 - 5133784
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| ||||||||||| || |||||||||||||   |||||||||  |||||  |||||| ||||||    
T  5133711 ttatgtataagctatttctataacaaaagataaaataaagataaactgtttttatataagatataagctgtttt 5133784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 5511507 - 5511556
Alignment:
Q  22 tgtataagttatttctataataagagataaaataaagtctaactgttttc 71  Q
    ||||||||||||||||||||| | | ||||||||||||| |||| |||||    
T  5511507 tgtataagttatttctataatgaaatataaaataaagtcaaacttttttc 5511556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 11344415 - 11344342
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||| ||||| ||||||||||| || |||||||| |||||| || ||||||| || || |||||| |||||||    
T  11344415 ttatgcataagatatttctataacaaaagataaaagaaagtcaaattgttttcatacaagctataaattgtttt 11344342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 15173466 - 15173507
Alignment:
Q  20 tatgtataagttatttctataataagagataaaataaagtct 61  Q
    |||||||||||||||||||||| || |||| |||||||||||    
T  15173466 tatgtataagttatttctataacaaaagatgaaataaagtct 15173507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 18234502 - 18234563
Alignment:
Q  140 taagcttttccaaacaatatcgcaagtgtttatgctagtagataagctcaaataaaccaatt 201  Q
    ||||||||  |||||||  || |||||||||||| || ||||||||||||||||||| ||||    
T  18234502 taagctttctcaaacaacgtcacaagtgtttatgttattagataagctcaaataaacaaatt 18234563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 18962169 - 18962104
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    |||||||| || ||||| ||||| || ||||||||||||||  |||||||||| ||||| ||||||    
T  18962169 ttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagctataa 18962104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 37474707 - 37474768
Alignment:
Q  31 tatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||| |||| || | ||||||||||||| | |||||||| |||||||||||| |||||||    
T  37474707 tatttcgataacaaaaaataaaataaagtcgatctgttttcatataaactataaattgtttt 37474768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 40672927 - 40672886
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtc 60  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  40672927 ttatgtataagttatttctatgaaaaaagataaaataaagtc 40672886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 3458598 - 3458654
Alignment:
Q  21 atgtataagttatttctataataagagataaaataaagtctaactgttttcttataa 77  Q
    |||| |||||||||| ||||| || ||||||||||||||| |||| ||||| |||||    
T  3458598 atgtctaagttatttttataacaaaagataaaataaagtcaaacttttttcatataa 3458654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 6926572 - 6926505
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagtt 87  Q
    |||||||||||| |||| || || || ||||||||||| ||| || ||||||| |||||||||||||||    
T  6926572 ttatgtataagtcatttgtacaagaaaagataaaataa-gtcaaattgttttcatataaactataagtt 6926505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 14302932 - 14302964
Alignment:
Q  166 tgtttatgctagtagataagctcaaataaacca 198  Q
    ||||||||||| |||||||||||||||||||||    
T  14302932 tgtttatgctaatagataagctcaaataaacca 14302964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 25790065 - 25790137
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgttt 91  Q
    ||||||||||  ||||||||||| || ||||||| | ||||| |||||||||| ||||| ||| || ||||||    
T  25790065 ttatgtataatatatttctataaaaaaagataaagtgaagtcaaactgttttcatataagctacaaattgttt 25790137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 32098439 - 32098387
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttc 71  Q
    |||| |||||| ||||||||||| || ||||||||||||||| || |||||||    
T  32098439 ttatatataagctatttctataacaaaagataaaataaagtcaaagtgttttc 32098387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 39567948 - 39567980
Alignment:
Q  162 caagtgtttatgctagtagataagctcaaataa 194  Q
    |||||||||||||| ||||||||||||||||||    
T  39567948 caagtgtttatgctggtagataagctcaaataa 39567980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 44119723 - 44119763
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagt 59  Q
    ||||||||||||||||| |||| ||| ||||||||||||||    
T  44119723 ttatgtataagttatttttatagtaaaagataaaataaagt 44119763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 44439486 - 44439418
Alignment:
Q  24 tataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||| |||| || | ||||||||||||  |||||||||  ||||| |||||| |||||||    
T  44439486 tataagttatttccataacaaaatataaaataaagttaaactgtttttgtataagctataaattgtttt 44439418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 26820142 - 26820204
Alignment:
Q  23 gtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataag 85  Q
    ||||||||||||||||||| || ||||||||||||||| |||| |||| ||||||||||||||    
T  26820142 gtataagttatttctataacaaaagataaaataaagtcaaactattttgttataaactataag 26820204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 33209345 - 33209285
Alignment:
Q  25 ataagttatttctataataagagataaaataaagtctaactgttttcttataaactataag 85  Q
    ||||| |||||||||||| | ||||||||||||||| |||||||||| |||||||||||||    
T  33209345 ataagctatttctataatgaaagataaaataaagtcgaactgttttcatataaactataag 33209285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 2213501 - 2213557
Alignment:
Q  149 ccaaacaatatcgcaagtgtttatgctagtagataagctcaaataaaccaatttaaa 205  Q
    ||||||| |||| |||||||||||||||||||||||  |||||||||||||| ||||    
T  2213501 ccaaacagtatcacaagtgtttatgctagtagataatttcaaataaaccaatataaa 2213557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 6918305 - 6918245
Alignment:
Q  24 tataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    |||||| ||||| |||||||| ||||||||||||||| ||||||||||| |||| ||||||    
T  6918305 tataagctatttatataataaaagataaaataaagtcaaactgttttctaataagctataa 6918245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 1470985 - 1470914
Alignment:
Q  21 atgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||| |||||||||||||| ||||||||||||||| || |  |||| ||||| ||||||| ||||||    
T  1470985 atgtataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataagctgtttt 1470914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 1664432 - 1664507
Alignment:
Q  119 aaaccacttatggacgtgtcgtaagcttttccaaacaatatcgcaagtgtttatgctagtagataagctcaaataa 194  Q
    |||| ||| |||||| |||| |||||| | ||||||| | || ||||||||||||||||||||||| |||||||||    
T  1664432 aaacaactaatggacatgtcataagctctcccaaacagtctcacaagtgtttatgctagtagataaactcaaataa 1664507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 10222916 - 10222845
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtt 90  Q
    |||||||||||  |||| ||||| || ||||||||||||||  ||||| |||| ||||||||||||||||||    
T  10222916 ttatgtataagaaatttatataaaaatagataaaataaagtagaactggtttcatataaactataagttgtt 10222845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 7714181 - 7714254
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||||  ||||||| || |||||||||||||   | |||||||| ||| ||||||||||||||||    
T  7714181 ttatgtataagttacatctataacaaaagataaaataaaggtgagctgttttcatatcaactataagttgtttt 7714254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 12361131 - 12361204
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||| ||||||||||||||||||  | ||||||||| ||||| || ||||||| ||||| ||||||| ||||||    
T  12361131 ttatatataagttatttctataaataaagataaaatgaagtcaaattgttttcatataagctataagctgtttt 12361204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 27728140 - 27728079
Alignment:
Q  31 tatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| || ||||||||||||||| |||| ||||| |||||| ||| |||||||||    
T  27728140 tatttctataaaaaaagataaaataaagtcaaactattttcatataaagtattagttgtttt 27728079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 35534992 - 35534931
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaact 80  Q
    |||| |||||| |||||||||||||| || |||||||||||| |||||||||  ||||||||    
T  35534992 ttatatataagctatttctataataaaagttaaaataaagtcaaactgtttttgtataaact 35534931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 40728543 - 40728498
Alignment:
Q  25 ataagttatttctataataagagataaaataaagtctaactgtttt 70  Q
    ||||||||||||||||| || ||||||||||||||| |||||||||    
T  40728543 ataagttatttctataacaaaagataaaataaagtcaaactgtttt 40728498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 42597340 - 42597413
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| ||||||||||| || ||||||||||||||  || ||||||| |  || ||||||||||||||    
T  42597340 ttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgtttt 42597413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 2093231 - 2093291
Alignment:
Q  32 atttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||| ||||||| ||||||||||||||| ||  |||||||| ||| ||||||||||||||    
T  2093231 atttcaataataaaagataaaataaagtcaaatggttttcttttaagctataagttgtttt 2093291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 4558737 - 4558777
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagt 59  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  4558737 ttatgtataagctatttctataataaaagataaaataaagt 4558777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 9700107 - 9700139
Alignment:
Q  162 caagtgtttatgctagtagataagctcaaataa 194  Q
    |||||||||||||||||||||||||||||||||    
T  9700107 caagtgtttatgctagtagataagctcaaataa 9700139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 13459582 - 13459657
Alignment:
Q  16 caattatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||||| ||||||||| |||| ||||||||| ||||| |||| |||   ||||| ||||||||||||||    
T  13459582 caattatgtataagctatttctatgataaaagataaaatgaagtc-aactttttgtgtataagctataagttgtttt 13459657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 38561670 - 38561738
Alignment:
Q  24 tataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||| ||||| || ||||||||||||||| |||| ||||  | || |||||||||||||||    
T  38561670 tataagttatttatataacaaaagataaaataaagtcaaactatttttatctatactataagttgtttt 38561738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 16211015 - 16210944
Alignment:
Q  21 atgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||| |||||||||| |||  |||||||||||||   | ||||||| ||||| ||||||||||||||    
T  16211015 atgtataagctatttctatagtaaatgataaaataaagttacattgttttcatataagctataagttgtttt 16210944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 30040670 - 30040604
Alignment:
Q  25 ataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||||||| ||   ||| ||||||||| | ||||||||| |||||||||||||||||||    
T  30040670 ataagttatttctataacaaagaatagaataaagtcaatctgttttct-ataaactataagttgtttt 30040604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 5071098 - 5071040
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataa 77  Q
    ||||||||||||| |||||||| ||| | ||||||||||||| |||| ||||| |||||    
T  5071098 ttatgtataagttgtttctatagtaaaatataaaataaagtcaaacttttttcatataa 5071040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 10417347 - 10417285
Alignment:
Q  30 ttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||| |||||| ||||||||| ||||| |||| ||| | ||||||||||||||| ||||    
T  10417347 ttatttctgtaataaaagataaaatgaagtcaaactttttgcatataaactataagttatttt 10417285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 16162866 - 16162904
Alignment:
Q  162 caagtgtttatgctagtagataagctcaaataaaccaat 200  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  16162866 caagtgtttatgctagtagataaactcaaataagccaat 16162904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 26215435 - 26215493
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataa 77  Q
    ||||||||||| ||||||||||| || ||||||||||||||  |||| ||||| |||||    
T  26215435 ttatgtataagctatttctataacaaaagataaaataaagttaaactattttcgtataa 26215493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 31884926 - 31884872
Alignment:
Q  140 taagcttttccaaacaatatcgcaagtgtttatgctagtagataagctcaaataa 194  Q
    |||| ||| ||||||| | || |||||| ||||||||||||||||||||||||||    
T  31884926 taagttttcccaaacactctcacaagtgcttatgctagtagataagctcaaataa 31884872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 35298609 - 35298535
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttc-ttataaactataagttgtttt 92  Q
    ||||||||||| ||||||  ||| || ||||||||||||| | ||| ||||||  ||||||||||||||||||||    
T  35298609 ttatgtataagctatttcagtaacaaaagataaaataaagccaaacagttttcaatataaactataagttgtttt 35298535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 7646040 - 7646080
Alignment:
Q  163 aagtgtttatgctagtagataagctcaaataaaccaatttaa 204  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  7646040 aagtgttaatgctagtagataagctcaaa-aaaccaatttaa 7646080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 28769470 - 28769397
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| |||| |||||| ||   ||||||| ||||| |||| ||||||||||| ||||||| ||||||    
T  28769470 ttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataagctgtttt 28769397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 29699193 - 29699234
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtc 60  Q
    ||||||| ||||||||||||||| || |||||||||||||||    
T  29699193 ttatgtacaagttatttctataacaaaagataaaataaagtc 29699234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 39049356 - 39049405
Alignment:
Q  140 taagcttttccaaacaatatcgcaagtgtttatgctagtagataagctca 189  Q
    ||||||||  |||||||| || ||| ||||||||||||||||||||||||    
T  39049356 taagctttcacaaacaatctcacaaatgtttatgctagtagataagctca 39049405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 39881706 - 39881653
Alignment:
Q  141 aagcttttccaaacaatatcgcaagtgtttatgctagtagataagctcaaataa 194  Q
    ||||| ||||||||||| || ||||||||||||| | |||||||| ||||||||    
T  39881706 aagctcttccaaacaatctcacaagtgtttatgccaatagataagttcaaataa 39881653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 43704473 - 43704436
Alignment:
Q  55 aaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  43704473 aaagtcaaactgttttcatataaactataagttgtttt 43704436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 1929990 - 1930030
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagt 59  Q
    ||||||||||||||||||||||  || ||||||||||||||    
T  1929990 ttatgtataagttatttctatagaaaaagataaaataaagt 1930030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 3537159 - 3537091
Alignment:
Q  22 tgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtt 90  Q
    ||||||||  |||||||||  || ||||||||||||||| || ||||||| ||||| ||||| ||||||    
T  3537159 tgtataagcaatttctatagcaaaagataaaataaagtcaaattgttttcgtataagctataggttgtt 3537091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 11119130 - 11119082
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgt 67  Q
    ||||||||| | ||||||||||| || ||||||||||||||| ||||||    
T  11119130 ttatgtatacgatatttctataacaaaagataaaataaagtcaaactgt 11119082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 12225030 - 12224978
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttc 71  Q
    ||||||||||||||||||||  | || ||||||||||||||| |||| |||||    
T  12225030 ttatgtataagttatttctaagacaaaagataaaataaagtcaaactattttc 12224978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 31315581 - 31315533
Alignment:
Q  22 tgtataagttatttctataataagagataaaataaagtctaactgtttt 70  Q
    |||||||| ||||| |||||||| ||||||||||||||| |||| ||||    
T  31315581 tgtataagctatttttataataaaagataaaataaagtcaaactatttt 31315533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 31862437 - 31862505
Alignment:
Q  24 tataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||| |||| || |||||| |||||||| |||| || || ||||| ||||||| ||||||    
T  31862437 tataagttatttcaataacaaaagataatataaagtcaaactattctcgtataagctataagatgtttt 31862505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 31884534 - 31884606
Alignment:
Q  20 tatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||||||||||||| || | ||||||| || |  || ||||||| ||||| |||||| |||||||    
T  31884534 tatgtataagttatttctataacaaaatataaaatcaaattgaattgttttcatataagctataaattgtttt 31884606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 195
Target Start/End: Complemental strand, 45098948 - 45098904
Alignment:
Q  151 aaacaatatcgcaagtgtttatgctagtagataagctcaaataaa 195  Q
    ||||||| || ||||||||||||| ||||||||||||| ||||||    
T  45098948 aaacaatctctcaagtgtttatgccagtagataagctcgaataaa 45098904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 12923453 - 12923383
Alignment:
Q  22 tgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||| |||| || |||||| ||||||||||||||| ||||| |||||||||| ||||||||||||||    
T  12923453 tgtataagctattgctgtaataaaagataaaataaagtcaaactgctttcttataagctataagttgtttt 12923383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 48397587 - 48397658
Alignment:
Q  21 atgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||||| |||||||| ||||||||||||||| || ||||||  | ||| ||||||||||||||    
T  48397587 atgtataagttatttttataataaaagataaaataaagtcaaattgtttttatttaagctataagttgtttt 48397658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 20192737 - 20192664
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| ||||| ||||| || ||||||||||||||| ||| |||||| ||||| ||||||| ||||||    
T  20192737 ttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataatctataagctgtttt 20192664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 37788800 - 37788872
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||||||| ||||| || ||||||||||||||| || | ||||| ||||| ||||||||||||||    
T  37788800 ttatgtataagttattt-tataacaaaagataaaataaagtccaattattttcgtataatctataagttgtttt 37788872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 40122883 - 40122811
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| |||||| |||| || ||||||||||||||| |||||||||| || || ||||||||||||||    
T  40122883 ttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcata-aagctataagttgtttt 40122811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 19679430 - 19679386
Alignment:
Q  48 ataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||    
T  19679430 ataaaataaagtcaaactgttttcttataagctataagttgtttt 19679386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 25459616 - 25459556
Alignment:
Q  140 taagcttttccaaacaatatcgcaagtgtttatgctagtagataagctcaaataaaccaat 200  Q
    |||||| ||||||||||| || |||||| |||||||||| |||||||||||||||| ||||    
T  25459616 taagctcttccaaacaatctcacaagtgcttatgctagttgataagctcaaataaatcaat 25459556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 36101507 - 36101579
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgttt 91  Q
    ||||| ||||| ||||||| |||||  ||||||||||||||| ||||| |||| ||||| |||||||||||||    
T  36101507 ttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataatctataagttgttt 36101579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 36139817 - 36139889
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgttt 91  Q
    ||||| ||||| ||||||| |||||  ||||||||||||||| ||||| |||| ||||| |||||||||||||    
T  36139817 ttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataagctataagttgttt 36139889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 32703077 - 32703148
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtt 90  Q
    ||||||||||| ||||||||| |||| |||||||||||| || || ||||||| ||||| |||||| |||||    
T  32703077 ttatgtataagctatttctattataaaagataaaataaactcaaattgttttcatataagctataaattgtt 32703148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 24235811 - 24235741
Alignment:
Q  22 tgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||||||||||| || |||||| |||||||| |||| |||   ||||| ||||||||||||||    
T  24235811 tgtataagttatttctataacaaaagataatataaagtcaaactatttgaatataagctataagttgtttt 24235741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 48365011 - 48364937
Alignment:
Q  18 attatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||||||||| |||| || ||||||||||||||| || ||||||| | ||  | ||||||||||||    
T  48365011 attatgtataagttatttcgataacaaaagataaaataaagtcaaattgttttcatttacgccataagttgtttt 48364937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 49587042 - 49586984
Alignment:
Q  24 tataagttatttctataataagagataaaataaagtctaactgttttcttataaactat 82  Q
    |||||| ||||||||||| || ||||||||||||||| |||||||||| ||||| ||||    
T  49587042 tataagctatttctataacaaaagataaaataaagtcaaactgttttcatataagctat 49586984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 48323760 - 48323833
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||| ||||||||||||||||||||| |||||| |||||||| || ||||||  | ||| |||||| |||||||    
T  48323760 ttatttataagttatttctataataaaagataatataaagtcaaattgtttttctgtaagctataaattgtttt 48323833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 49772799 - 49772726
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| ||||| | |||||| | |||||||||||||||| ||||||| ||  || |||||||||||||    
T  49772799 ttatgtataagctatttttgtaataaaaaataaaataaagtctaattgttttcgtaggaattataagttgtttt 49772726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 22214811 - 22214739
Alignment:
Q  20 tatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||| |||||||||||| ||  |||||||||||||  || ||| ||| ||||| ||||||||||||||    
T  22214811 tatgtataaattatttctataacaaaggataaaataaagtgaaattgtattcatataacctataagttgtttt 22214739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 23326154 - 23326122
Alignment:
Q  163 aagtgtttatgctagtagataagctcaaataaa 195  Q
    |||||||||||||||||||||||||||||||||    
T  23326154 aagtgtttatgctagtagataagctcaaataaa 23326122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 24887409 - 24887341
Alignment:
Q  24 tataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||| ||||||||||| || ||||||||||||||| |||||| ||| ||||| ||| ||| ||||||    
T  24887409 tataagctatttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgtttt 24887341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 25258710 - 25258774
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactata 83  Q
    ||||| ||||| |||||||||||||| |||| |||||||||| | || ||||| |||||||||||    
T  25258710 ttatgcataagctatttctataataaaagatcaaataaagtccatctattttcgtataaactata 25258774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 29771751 - 29771827
Alignment:
Q  22 tgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgttttataatg 98  Q
    |||||||||||||||||||  || ||| ||| ||||||  || | ||||| ||||||||||||||||||| ||||||    
T  29771751 tgtataagttatttctataccaaaagacaaagtaaagtgaaattattttcatataaactataagttgtttcataatg 29771827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 53762352 - 53762320
Alignment:
Q  168 tttatgctagtagataagctcaaataaaccaat 200  Q
    |||||||||||||||||||||||||||||||||    
T  53762352 tttatgctagtagataagctcaaataaaccaat 53762320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 1816540 - 1816595
Alignment:
Q  37 tataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||| ||||||||||||||| |||||||||  |||||  |||||||||||||    
T  1816540 tataataaaagataaaataaagtcaaactgtttttgtataagatataagttgtttt 1816595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 10101601 - 10101534
Alignment:
Q  25 ataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||||||| || ||||||||||||||  || ||||||| |||||  || ||||||||||    
T  10101601 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgtttt 10101534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 10212526 - 10212459
Alignment:
Q  25 ataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||||||| || ||||||||||||||  || ||||||| |||||  || ||||||||||    
T  10212526 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgtttt 10212459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 1395611 - 1395673
Alignment:
Q  20 tatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactat 82  Q
    |||||||||| ||||||||||| || ||||||||||||||| || | ||||| ||||| ||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctat 1395673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 19679295 - 19679245
Alignment:
Q  159 tcgcaagtgtttatgctagtagataagctcaaataaaccaatttaaatagg 209  Q
    ||||||||| |||||||||||||||| ||||||||| |||||  |||||||    
T  19679295 tcgcaagtgcttatgctagtagataaactcaaataacccaatccaaatagg 19679245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 20807063 - 20807113
Alignment:
Q  43 aagagataaaataaagtctaactgttttcttataaactataagttgtttta 93  Q
    ||||||||||  |||||| |||||||||| ||||| |||||||||||||||    
T  20807063 aagagataaatcaaagtcaaactgttttcgtataagctataagttgtttta 20807113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 44014762 - 44014724
Alignment:
Q  162 caagtgtttatgctagtagataagctcaaataaaccaat 200  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  44014762 caagtgtttatgctagtagataaactcaaataagccaat 44014724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 49465901 - 49465859
Alignment:
Q  162 caagtgtttatgctagtagataagctcaaataaaccaatttaa 204  Q
    ||||||||||||||| | |||||||||||||||| ||||||||    
T  49465901 caagtgtttatgctaatggataagctcaaataaaacaatttaa 49465859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 2304373 - 2304336
Alignment:
Q  18 attatgtataagttatttctataataagagataaaata 55  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  2304373 attatgtataagctatttctataataaaagataaaata 2304336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 2865790 - 2865718
Alignment:
Q  18 attatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgttt 91  Q
    ||||| |||||| ||||||||||| || || ||||| |||||| || ||||||| ||||| |||||||||||||    
T  2865790 attatatataagctatttctataacaa-agttaaaacaaagtcaaattgttttcatataacctataagttgttt 2865718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 3467491 - 3467446
Alignment:
Q  47 gataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||||| || ||||||| |||| |||||||||||||||    
T  3467491 gataaaataaagtcaaattgttttcatatagactataagttgtttt 3467446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 8007826 - 8007761
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    ||||||||||| | ||||||||| || ||||||| ||||||| ||||||| || ||||| ||||||    
T  8007826 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 8007761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 20143869 - 20143921
Alignment:
Q  24 tataagttatttctataataagagataaaataaagtctaactgttttcttataa 77  Q
    ||||||||||||||||||||| ||||||||| ||||| |||| ||||| |||||    
T  20143869 tataagttatttctataataaaagataaaat-aagtcaaactattttcatataa 20143921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 23269320 - 23269268
Alignment:
Q  24 tataagttatttctataataagagataaaataaagtctaactgttttcttataa 77  Q
    ||||||||||||||||||||| ||||||||| ||||| |||| ||||| |||||    
T  23269320 tataagttatttctataataaaagataaaat-aagtcaaactattttcatataa 23269268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 24605147 - 24605106
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtc 60  Q
    ||||||||||||||||||||||| || |||| ||||||||||    
T  24605147 ttatgtataagttatttctataacaaaagatgaaataaagtc 24605106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 30669101 - 30669036
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    ||||||||||| ||||| ||||| || ||||||||||| ||  || | ||||||||||||||||||    
T  30669101 ttatgtataagctatttttataacaaaagataaaataatgttgaatttttttcttataaactataa 30669036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 32095317 - 32095256
Alignment:
Q  24 tataagttatttctataataagagataaaataaagtctaactgttttcttataaactataag 85  Q
    |||||||||||||||||| || ||||||||| ||||  || ||||||  |||||||||||||    
T  32095317 tataagttatttctataacaaaagataaaattaagttaaattgtttttgtataaactataag 32095256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 38462220 - 38462277
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttata 76  Q
    |||| |||||| ||||||||||  || ||||||||||||||| |||||||||| ||||    
T  38462220 ttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatata 38462277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 48588609 - 48588646
Alignment:
Q  24 tataagttatttctataataagagataaaataaagtct 61  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  48588609 tataagttatttctataataaaatataaaataaagtct 48588646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 2128382 - 2128342
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagt 59  Q
    ||||||||||| ||||||||||| || ||||||||||||||    
T  2128382 ttatgtataagctatttctataacaaaagataaaataaagt 2128342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 3182493 - 3182441
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttc 71  Q
    |||||||||||||| |||||||  || ||||||||||||||| || |||||||    
T  3182493 ttatgtataagttacttctatagaaaaagataaaataaagtcaaattgttttc 3182441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 22232767 - 22232823
Alignment:
Q  21 atgtataagttatttctataataagagataaaataaagtctaactgttttcttataa 77  Q
    ||||||||| ||||| ||||| ||  |||||||||||||| |||||||||| |||||    
T  22232767 atgtataagctatttatataacaaatgataaaataaagtcaaactgttttcatataa 22232823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 23815992 - 23816024
Alignment:
Q  19 ttatgtataagttatttctataataagagataa 51  Q
    |||||||||||||||||||||||||| ||||||    
T  23815992 ttatgtataagttatttctataataaaagataa 23816024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 35394832 - 35394792
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagt 59  Q
    ||||||||||  |||||||||||||| ||||||||||||||    
T  35394832 ttatgtataatctatttctataataaaagataaaataaagt 35394792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 36646508 - 36646440
Alignment:
Q  24 tataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||| ||||||||| | || |||||||||||||| ||| ||||||| |||||  ||||| |||||||    
T  36646508 tataagctatttctatgacaaaagataaaataaagtataattgttttcatataagttataacttgtttt 36646440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 36887639 - 36887679
Alignment:
Q  169 ttatgctagtagataagctcaaataaaccaatttaaatagg 209  Q
    ||||||| |||||||||||||||||| ||||| ||||||||    
T  36887639 ttatgcttgtagataagctcaaataagccaatctaaatagg 36887679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 40240785 - 40240753
Alignment:
Q  162 caagtgtttatgctagtagataagctcaaataa 194  Q
    |||||||||||||||||| ||||||||||||||    
T  40240785 caagtgtttatgctagtatataagctcaaataa 40240753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 41028982 - 41028930
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttc 71  Q
    ||||||||||| ||||||||||| || ||| ||||||||||| | ||||||||    
T  41028982 ttatgtataagctatttctataacaaaagaaaaaataaagtcaatctgttttc 41028930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 41057248 - 41057308
Alignment:
Q  149 ccaaacaatatcgcaagtgtttatgctagtagataagctcaaataaaccaatttaaatagg 209  Q
    ||||||| | || |||||| ||||||  |||||||||||||||||| |||||| |||||||    
T  41057248 ccaaacagtctcacaagtgcttatgcatgtagataagctcaaataagccaattcaaatagg 41057308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 51929847 - 51929879
Alignment:
Q  162 caagtgtttatgctagtagataagctcaaataa 194  Q
    ||||||||||||||| |||||||||||||||||    
T  51929847 caagtgtttatgctaatagataagctcaaataa 51929879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 54965457 - 54965517
Alignment:
Q  31 tatttctataataagagataaaataaagtctaactgttttcttataaactataagttgttt 91  Q
    |||||| ||||||  ||||||||||||||| |||  ||||| ||||||||| |||||||||    
T  54965457 tatttcaataatataagataaaataaagtcaaacaattttcatataaactacaagttgttt 54965517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 24929444 - 24929505
Alignment:
Q  31 tatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| || |||||||||||||||||||||||||| || || ||||||||||||||    
T  24929444 tatttctataacaaaagataaaataaagtctaactgttttcataaaagctataagttgtttt 24929505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 26883933 - 26884007
Alignment:
Q  18 attatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||||||||||| ||| |||||||||||| ||||  || ||||||| ||||| |||||||| |||||    
T  26883933 attatgtataagttatttctctaagaagagataaaatgaagttaaattgttttcatataagctataagtcgtttt 26884007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 49219082 - 49219151
Alignment:
Q  23 gtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||||||||| || | ||||||||||||| || | ||||| ||||| ||||||||||||||    
T  49219082 gtataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgtttt 49219151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 11389465 - 11389532
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagt 86  Q
    |||||||||| |||||||||||| || ||||||| ||||||  |||||||||  ||||||||||||||    
T  11389465 ttatgtataaattatttctataaaaaaagataaagtaaagttaaactgttttaatataaactataagt 11389532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 19422357 - 19422420
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactat 82  Q
    ||||||||||||||||||||||| || ||||| ||||||||| |||  ||||| ||||||||||    
T  19422357 ttatgtataagttatttctataacaaaagatataataaagtcaaacatttttcatataaactat 19422420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 44019463 - 44019537
Alignment:
Q  20 tatgtataagttatttctataataagagataaaataaagtc--taactgttttcttataaactataagttgtttt 92  Q
    |||||||| | ||||||||||| || |||||||||||||||  ||  ||||||| ||||||||||||||||||||    
T  44019463 tatgtataggctatttctataagaaaagataaaataaagtcattatatgttttcatataaactataagttgtttt 44019537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 3176253 - 3176191
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaacta 81  Q
    ||||||||||||||||||||||| || |||| ||||||| || ||  ||||||||||||||||    
T  3176253 ttatgtataagttatttctataacaaaagattaaataaaatcaaatggttttcttataaacta 3176191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 8422968 - 8422897
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| ||||| ||||| || |||||||||||||||  | ||||||| ||||| ||||||||||||||    
T  8422968 ttatgtataagctatttttataaaaaaagataaaataaagtc--attgttttcatataagctataagttgtttt 8422897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 19691349 - 19691415
Alignment:
Q  22 tgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttg 88  Q
    |||||||| |||||||||||||| || |||||||||||| | |||||||| || ||| |||||||||    
T  19691349 tgtataagctatttctataataaaagttaaaataaagtcaacctgttttcatagaaattataagttg 19691415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 19701934 - 19702000
Alignment:
Q  22 tgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttg 88  Q
    |||||||| |||||||||||||| || |||||||||||| | |||||||| || ||| |||||||||    
T  19701934 tgtataagctatttctataataaaagttaaaataaagtcaacctgttttcatagaaattataagttg 19702000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 30024639 - 30024704
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    ||||| ||||||||||||||||| || ||||||||||||||  || ||||||| ||||| ||||||    
T  30024639 ttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagctataa 30024704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 30207701 - 30207629
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||| |||| |||||||| || | |||||||||| || |||||||||| ||||| ||||||||||||||    
T  30207701 ttatgtatatgttagttctataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttgtttt 30207629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 42322010 - 42321937
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||| ||||| ||||| ||||| ||  |||||||||||||| || ||||||| |||||| |||||||||||||    
T  42322010 ttatgaataagctatttttataacaaatgataaaataaagtcaaattgttttcatataaattataagttgtttt 42321937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 50745939 - 50746012
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||| |||| ||||| ||||| || |||||||||||| || |||||||||  ||||||||| ||||||||||    
T  50745939 ttatgtctaagctatttttataacaaaagataaaataaaatcaaactgtttttatataaactacaagttgtttt 50746012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 51098254 - 51098319
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    ||||||||||| |||| |||| |||| ||||||||||| ||| ||||| |||| ||||||||||||    
T  51098254 ttatgtataagatattcctattataaaagataaaataacgtcaaactgctttcatataaactataa 51098319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 4798690 - 4798638
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttc 71  Q
    ||||||||||| ||||||||||  || |||||||||||||||||| |||||||    
T  4798690 ttatgtataagctatttctatatcaaaagataaaataaagtctaaatgttttc 4798638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 31038996 - 31038940
Alignment:
Q  21 atgtataagttatttctataataagagataaaataaagtctaactgttttcttataa 77  Q
    ||||||| |||||||||| ||||| ||||||||||||||| || ||||||| |||||    
T  31038996 atgtatacgttatttctacaataatagataaaataaagtcaaattgttttcatataa 31038940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 201
Target Start/End: Original strand, 1075564 - 1075603
Alignment:
Q  162 caagtgtttatgctagtagataagctcaaataaaccaatt 201  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  1075564 caagtgtttatgccagtagataagctcaaataagccaatt 1075603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 4071833 - 4071892
Alignment:
Q  31 tatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtt 90  Q
    ||||||||||| || ||||||||||||||| || | ||||| ||||| ||||||||||||    
T  4071833 tatttctataacaaaagataaaataaagtcaaattattttcatataagctataagttgtt 4071892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 54325165 - 54325102
Alignment:
Q  22 tgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataag 85  Q
    |||||||  ||||||||| | || ||||||||||||||| |||||||||| ||||| |||||||    
T  54325165 tgtataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctataag 54325102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 20907112 - 20907166
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttctt 73  Q
    ||||||||||| ||||| ||||| || ||||||||||||||  ||||||||||||    
T  20907112 ttatgtataagctatttgtataagaaaagataaaataaagtgaaactgttttctt 20907166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 23815311 - 23815361
Alignment:
Q  21 atgtataagttatttctataataagagataaaataaagtctaactgttttc 71  Q
    |||| |||||||||||||||| || ||||||||||| ||| ||||||||||    
T  23815311 atgtttaagttatttctataacaaaagataaaataatgtcaaactgttttc 23815361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 194
Target Start/End: Original strand, 28615426 - 28615472
Alignment:
Q  148 tccaaacaatatcgcaagtgtttatgctagtagataagctcaaataa 194  Q
    |||||||||| || ||||||||||||||||||||||| || ||||||    
T  28615426 tccaaacaatctcacaagtgtttatgctagtagataaacttaaataa 28615472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 51044590 - 51044544
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaact 65  Q
    ||||||||||| ||||||||||| || ||||||||||||||| ||||    
T  51044590 ttatgtataagctatttctataacaaaagataaaataaagtcaaact 51044544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 4191678 - 4191731
Alignment:
Q  19 ttatgtataagttatttctataataagagat-aaaataaagtctaactgttttc 71  Q
    ||||||||||| ||||||||||| || |||| ||||||||||| ||||||||||    
T  4191678 ttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttc 4191731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 9680603 - 9680644
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtc 60  Q
    ||||||||||| |||||| ||||||| |||||||||||||||    
T  9680603 ttatgtataagctatttcgataataaaagataaaataaagtc 9680644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 13949948 - 13949903
Alignment:
Q  46 agataaaataaagtctaactgttttcttataaactataagttgttt 91  Q
    ||||||||||||||| || ||||||| ||||| |||||||||||||    
T  13949948 agataaaataaagtcaaattgttttcatataagctataagttgttt 13949903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 22471270 - 22471343
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||  |||||| |||| | ||||||| ||||| | |||||||||| |||||  |||||||||||||    
T  22471270 ttatgtataagccatttctttaattaaagataaattaaaggcaaactgttttcatataagttataagttgtttt 22471343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 25434579 - 25434518
Alignment:
Q  31 tatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||| ||| || ||||||||||||||| |  ||||||| ||||| ||||||||||||||    
T  25434579 tatttctgtaagaaaagataaaataaagtcaatatgttttcatataagctataagttgtttt 25434518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 30338723 - 30338658
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    ||||||||||  ||||||||||| || ||||| ||||||||  |||||||||| ||||| ||||||    
T  30338723 ttatgtataaactatttctataacaaaagatagaataaagttaaactgttttcatataagctataa 30338658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 44119293 - 44119228
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    ||||||||||||||||||||||  || |||||||| |||||| |  ||||||| ||||| ||||||    
T  44119293 ttatgtataagttatttctatagcaaaagataaaacaaagtcaatatgttttcatataagctataa 44119228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 6364088 - 6364128
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagt 59  Q
    ||||||||||| ||||||||||| || ||||||||||||||    
T  6364088 ttatgtataagctatttctataacaaaagataaaataaagt 6364128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 43824376 - 43824420
Alignment:
Q  149 ccaaacaatatcgcaagtgtttatgctagtagataagctcaaata 193  Q
    ||||||||||||||||||| |||||  |||| |||||||||||||    
T  43824376 ccaaacaatatcgcaagtgcttatgtcagtaaataagctcaaata 43824420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 44319891 - 44319946
Alignment:
Q  21 atgtataagttatttctataataagagataaaataaagtctaactgttttcttataa 77  Q
    ||||||||  ||||||||||| || ||||||||||||||| |||||||||| |||||    
T  44319891 atgtataaactatttctataaaaa-agataaaataaagtcgaactgttttcatataa 44319946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 47970257 - 47970309
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttc 71  Q
    ||||||||||| ||||||||||| || ||||||||| ||||| |||| |||||    
T  47970257 ttatgtataagctatttctataacaaaagataaaatgaagtcaaactattttc 47970309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 47970402 - 47970442
Alignment:
Q  162 caagtgtttatgctagtagataagctcaaataaaccaattt 202  Q
    |||||| |||||  |||||||||||||||||||||||||||    
T  47970402 caagtgcttatgtcagtagataagctcaaataaaccaattt 47970442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 53626717 - 53626788
Alignment:
Q  23 gtataagttattt--ctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||||  |||||| || |||||||||||| || || ||||||| ||||| ||||||| ||||||    
T  53626717 gtataagttatttttctataacaaaagataaaataaattcaaaatgttttcatataagctataagctgtttt 53626788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 55870459 - 55870399
Alignment:
Q  32 atttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||| ||||| || |||| |||||||||| ||||||||||  |||| ||||||||||||||    
T  55870459 atttttataacaaaagatcaaataaagtcaaactgttttcacataagctataagttgtttt 55870399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 44241800 - 44241871
Alignment:
Q  20 tatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||||||||||||| || |||||||||||||| ||||| ||||  ||||| ||||||||||||||    
T  44241800 tatgtataagttatttctataacaacagataaaataaagt-taactatttttgtataacctataagttgtttt 44241871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 9527205 - 9527148
Alignment:
Q  35 tctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||| || ||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  9527205 tctataacaaaagatataataaagtcaaactgttttcatataaactataagttgtttt 9527148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 48157251 - 48157178
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||| ||||||||||||||| ||||||||||||||  || ||||||  ||||| |||||| |||||||    
T  48157251 ttatgtataacttatttctataataaaagataaaataaagtgaaattgttttaatataagctataatttgtttt 48157178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 5006639 - 5006567
Alignment:
Q  20 tatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||| |||| |||||| || ||||||||||||||| |||||||||| |||||  ||||| |||||||    
T  5006639 tatgtataagctattcctataacaaaagataaaataaagtcaaactgttttcatataaggtataaattgtttt 5006567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 45777284 - 45777229
Alignment:
Q  37 tataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||| || ||||||||| ||||| |||||||||| ||||||||||||||||||||    
T  45777284 tataacaaaagataaaattaagtcaaactgttttcatataaactataagttgtttt 45777229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 3802267 - 3802197
Alignment:
Q  22 tgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||| |||||||||||||| || |||||||||||| ||  |||||| |||||| |||||| ||||||    
T  3802267 tgtataagctatttctataataaaaggtaaaataaagtcaaatcgttttcatataaattataagctgtttt 3802197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 27121717 - 27121659
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataa 77  Q
    ||||||||||| ||||||||||||||  |||||||||||||| || ||||||| |||||    
T  27121717 ttatgtataagatatttctataataaatgataaaataaagtcaaattgttttcatataa 27121659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 1417203 - 1417276
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||  ||||| ||||| || ||||||||||||||| || ||||||| ||||| | ||||||||||||    
T  1417203 ttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgtttt 1417276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 3610871 - 3610798
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| |||||||| || || ||||||||| ||| | |||||||||  ||||| ||||||||||||||    
T  3610871 ttatgtataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagttgtttt 3610798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 30496643 - 30496716
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||  ||||||||||| || | ||||||||||||| || ||||||| ||||| ||||| ||||||||    
T  30496643 ttatgtataaactatttctataacaaaatataaaataaagtcaaattgttttcgtataacctataggttgtttt 30496716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 33894562 - 33894634
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| ||||||||||| || ||||||||| ||||| |||||||||| ||||| || || ||||||||    
T  33894562 ttatgtataagctatttctataacaaaagataaaat-aagtcaaactgttttcatataagctttatgttgtttt 33894634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 36874096 - 36874023
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| ||||||||||| ||  ||||||||||| |  || | ||||||||||| ||||||||||||||    
T  36874096 ttatgtataagctatttctataagaaatgataaaataaatttgaattattttcttataagctataagttgtttt 36874023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 39591593 - 39591540
Alignment:
Q  24 tataagttatttctataataagagataaaataaagtctaactgttttcttataa 77  Q
    |||||||||||||||||| || ||||||||||||||| || ||||||| |||||    
T  39591593 tataagttatttctataacaaaagataaaataaagtcaaattgttttcatataa 39591540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 45813311 - 45813238
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||| |||||| ||||||||||  || ||||||||||||||| |  ||||||| ||||| ||||||||||||||    
T  45813311 ttatttataagctatttctataccaaaagataaaataaagtcaacttgttttcatataatctataagttgtttt 45813238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 17989125 - 17989081
Alignment:
Q  48 ataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||| |||||||||| |||||||||||| |||||||    
T  17989125 ataaaataaagtcaaactgttttcatataaactataatttgtttt 17989081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 194
Target Start/End: Complemental strand, 40598452 - 40598417
Alignment:
Q  159 tcgcaagtgtttatgctagtagataagctcaaataa 194  Q
    ||||||||||| ||||||||||||||||||||||||    
T  40598452 tcgcaagtgttcatgctagtagataagctcaaataa 40598417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 1432098 - 1432060
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaa 57  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  1432098 ttatgtataagttatttctataacaaaagataaaataaa 1432060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 3501097 - 3501027
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgt 89  Q
    ||||||||||| || || |||||||| ||||||||||||||| ||   ||||| |||||| ||||||||||    
T  3501097 ttatgtataagctaattatataataaaagataaaataaagtcaaatcattttcatataaaatataagttgt 3501027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 17989007 - 17988965
Alignment:
Q  152 aacaatatcgcaagtgtttatgctagtagataagctcaaataa 194  Q
    |||||||| ||||||| |||||| |||||||||||||||||||    
T  17989007 aacaatattgcaagtgattatgcgagtagataagctcaaataa 17988965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 35536046 - 35536104
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataa 77  Q
    ||||||||||| ||||||||||| |  ||||||||||||||| || ||||||| |||||    
T  35536046 ttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataa 35536104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 45593850 - 45593792
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataa 77  Q
    ||||||||||| ||||||| ||| || | ||||||||||||| |||||||||| |||||    
T  45593850 ttatgtataagctatttctgtaacaaaacataaaataaagtcaaactgttttcatataa 45593792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 47004033 - 47004099
Alignment:
Q  26 taagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||| ||||||||||| || ||||||||||||||| |||| ||||  ||| ||||||||| ||||||    
T  47004033 taagctatttctataacaatagataaaataaagtcaaactatttttatatgaactataagctgtttt 47004099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 47467917 - 47467855
Alignment:
Q  24 tataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagt 86  Q
    |||||| |||||||||||||||||||||   |||||| |||||||||  ||||||| ||||||    
T  47467917 tataagctatttctataataagagataattaaaagtccaactgtttttatataaacaataagt 47467855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 2727479 - 2727418
Alignment:
Q  31 tatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| || ||||||||||||| | |||| ||||| ||| |||||||| |||||||    
T  2727479 tatttctataacaaaagataaaataaaggcaaactcttttcatatcaactataaattgtttt 2727418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 2895343 - 2895388
Alignment:
Q  163 aagtgtttatgctagtagataagctcaaataaaccaatttaaatag 208  Q
    |||||||||||||||||||||| ||||||| |||| ||| ||||||    
T  2895343 aagtgtttatgctagtagataatctcaaatgaaccgattcaaatag 2895388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 11208388 - 11208461
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||| |||||| || ||||| || || |||||||||||| || ||| |||||| ||||||||||| ||||||||    
T  11208388 ttatatataagataattctacaacaaaagataaaataaactcaaaccgttttcatataaactatatgttgtttt 11208461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 22355850 - 22355883
Alignment:
Q  26 taagttatttctataataagagataaaataaagt 59  Q
    |||| |||||||||||||||||||||||||||||    
T  22355850 taagatatttctataataagagataaaataaagt 22355883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 23918896 - 23918961
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    |||||| |||||||| ||||| | || ||||||||||||||| || ||||||| ||||| ||||||    
T  23918896 ttatgtgtaagttatctctattacaaaagataaaataaagtcaaattgttttcatataagctataa 23918961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 27481425 - 27481352
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| ||||||||||| ||  |||||||  ||||| |||||||| | ||||| ||||||||| ||||    
T  27481425 ttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagttatttt 27481352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 28165030 - 28165095
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    ||||||||||||| ||||||||| || ||||||||| ||||| || ||||||  ||||| ||||||    
T  28165030 ttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataa 28165095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 47528064 - 47527991
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| |||||||||||| |  ||||||||||| |  |||||||||   |||| ||||||||||||||    
T  47528064 ttatgtataagctatttctataattaaggataaaataaaattcaactgtttttacataagctataagttgtttt 47527991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 49060479 - 49060552
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| ||||||||||| || | ||||||||||||| || | ||||  ||||| ||||||||| ||||    
T  49060479 ttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctataagttatttt 49060552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 529468 - 529500
Alignment:
Q  162 caagtgtttatgctagtagataagctcaaataa 194  Q
    ||||||||||||| |||||||||||||||||||    
T  529468 caagtgtttatgccagtagataagctcaaataa 529500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 7244641 - 7244693
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttc 71  Q
    ||||||||||| ||||||||||  || |||||||| |||||| ||||||||||    
T  7244641 ttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttc 7244693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 8094412 - 8094444
Alignment:
Q  162 caagtgtttatgctagtagataagctcaaataa 194  Q
    |||||| ||||||||||||||||||||||||||    
T  8094412 caagtgcttatgctagtagataagctcaaataa 8094444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 31338467 - 31338519
Alignment:
Q  39 taataagagataaaataaagtctaactgttttcttataaactataagttgttt 91  Q
    |||||| ||||||||||||||| |||||||||  |||||  ||||||||||||    
T  31338467 taataaaagataaaataaagtcaaactgtttttatataagttataagttgttt 31338519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 40252080 - 40252048
Alignment:
Q  169 ttatgctagtagataagctcaaataaaccaatt 201  Q
    |||||||||||||||||||||||||| ||||||    
T  40252080 ttatgctagtagataagctcaaataagccaatt 40252048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 29117062 - 29116998
Alignment:
Q  18 attatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactat 82  Q
    |||||||||| ||||||||||||| || ||||||||||||||| |||||||||| ||||| ||||    
T  29117062 attatgtatatgttatttctataacaaaagataaaataaagtcaaactgttttcgtataagctat 29116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 35135793 - 35135725
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagtt 87  Q
    ||||||||||| ||||||||||| || ||||||||||||||| |||| ||||| ||||| |||||||||    
T  35135793 ttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataagtt 35135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 14295457 - 14295518
Alignment:
Q  31 tatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| || ||||||||||||||| |||||||||| ||||| ||||||| ||||||    
T  14295457 tatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgtttt 14295518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 19177418 - 19177491
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||  |||||||| || |  ||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  19177418 ttatgtataaactatttctacaacagaagataaaattaagtctaactgttttcatataagctataagttgtttt 19177491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 28586885 - 28586824
Alignment:
Q  31 tatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||| || ||||||||||||||| |||||||||| |||||| |||||| ||||||    
T  28586885 tatttctataacaaaagataaaataaagtcaaactgttttcatataaattataagctgtttt 28586824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 38831587 - 38831514
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||| |||||| ||||||| | |||| ||||||||||||||| |||||||||| ||||||  ||||||||||||    
T  38831587 ttatatataagctatttctgttataaaagataaaataaagtcaaactgttttcgtataaatgataagttgtttt 38831514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 37690767 - 37690695
Alignment:
Q  20 tatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||| |||||||||||||||||| ||||||||| || || ||  |||||| ||||| ||||||||||||||    
T  37690767 tatgtaaaagttatttctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgtttt 37690695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 9703365 - 9703298
Alignment:
Q  25 ataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||| ||| |||||||||||||||||| ||||  |||| ||||| ||| ||||||||||    
T  9703365 ataagttatttctgtaacaagagataaaataaagtcaaactcatttcatataagctacaagttgtttt 9703298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 9927524 - 9927601
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgttttataa 96  Q
    ||||||||||||||||| |||| ||| ||||||||| | ||| || ||||||| ||||| | ||||||||||| ||||    
T  9927524 ttatgtataagttatttgtatagtaaaagataaaattacgtcaaattgttttcatataagcgataagttgtttcataa 9927601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 11153413 - 11153372
Alignment:
Q  159 tcgcaagtgtttatgctagtagataagctcaaataaaccaat 200  Q
    ||||||||||||||||||||||||||||||||| || |||||    
T  11153413 tcgcaagtgtttatgctagtagataagctcaaacaagccaat 11153372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 18704166 - 18704094
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||||||||||||| || |||| |||||||||| | || ||||  ||||| ||||||||||||||    
T  18704166 ttatgtataagttatttctataacaaaagat-aaataaagtcaagctatttttatataagctataagttgtttt 18704094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 35960365 - 35960421
Alignment:
Q  31 tatttctataataagagataaaataaagtctaactgttttcttataaactataagttg 88  Q
    |||||||||||||| ||||||||||||||| ||||  |||| ||||||||||||||||    
T  35960365 tatttctataataaaagataaaataaagtcaaact-atttcatataaactataagttg 35960421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 37526322 - 37526257
Alignment:
Q  27 aagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||||||||| ||||||||| || || ||  |||||| ||||| ||||||||||||||    
T  37526322 aagttatttctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgtttt 37526257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 37588483 - 37588418
Alignment:
Q  27 aagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||||||||| ||||||||| || || ||  |||||| ||||| ||||||||||||||    
T  37588483 aagttatttctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgtttt 37588418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 11054125 - 11054165
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagt 59  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  11054125 ttatgtataagctatttctataataaaagataaaataaagt 11054165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 11095471 - 11095423
Alignment:
Q  150 caaacaatatcgcaagtgtttatgctagtagataagctcaaataaacca 198  Q
    ||||||||||| ||||||||||||  |||||||||||| ||||||||||    
T  11095471 caaacaatatcacaagtgtttatgtcagtagataagcttaaataaacca 11095423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 19113248 - 19113176
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgttt 91  Q
    ||||||||||  ||||| ||||| || | ||||||||| ||| || | |||||||||||||||||||||||||    
T  19113248 ttatgtataaactatttttataacaaaaaataaaataatgtcgaatttttttcttataaactataagttgttt 19113176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 985573 - 985624
Alignment:
Q  20 tatgtataagttatttctataataagagataaaataaagtctaactgttttc 71  Q
    |||||||| |||||||| |||| || ||||||||||||||| ||||||||||    
T  985573 tatgtatatgttatttccataacaaaagataaaataaagtcaaactgttttc 985624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 26209543 - 26209471
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttc-ttataaactataagttgtttt 92  Q
    ||||||||||||||||||||||| |  ||||||||||||||| || |||||||  ||||| ||||||| ||||||    
T  26209543 ttatgtataagttatttctataaca--agataaaataaagtccaattgttttcaatataagctataagctgtttt 26209471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 10537801 - 10537743
Alignment:
Q  24 tataagttatttctataataagagataaaataaagtctaactgttttcttataaactat 82  Q
    |||||||||||||||||| |||| ||||||||||||  |||| ||||| || |||||||    
T  10537801 tataagttatttctataacaagatataaaataaagttaaactattttcataaaaactat 10537743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 200
Target Start/End: Complemental strand, 10771864 - 10771814
Alignment:
Q  150 caaacaatatcgcaagtgtttatgctagtagataagctcaaataaaccaat 200  Q
    |||||||| || |||||| |||||| ||||||||||||||||||| |||||    
T  10771864 caaacaatctcacaagtgcttatgccagtagataagctcaaataagccaat 10771814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 11615618 - 11615580
Alignment:
Q  162 caagtgtttatgctagtagataagctcaaataaaccaat 200  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  11615618 caagtgtttatgttagtagataagctcaaataagccaat 11615580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 32059693 - 32059647
Alignment:
Q  46 agataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||||| |||||||||| ||||| ||||||| ||||||    
T  32059693 agataaaataaagtcaaactgttttcatataagctataagctgtttt 32059647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 36539712 - 36539758
Alignment:
Q  46 agataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||||| | |||||||| ||||| ||||||||||||||    
T  36539712 agataaaataaagtcaacctgttttcatataagctataagttgtttt 36539758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 37063205 - 37063147
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataa 77  Q
    ||||||||||  ||||||||||| || ||||||||||||||| |||| ||||| |||||    
T  37063205 ttatgtataaactatttctataacaaaagataaaataaagtcaaactattttcatataa 37063147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 41112871 - 41112829
Alignment:
Q  153 acaatatcgcaagtgtttatgctagtagataagctcaaataaa 195  Q
    ||||| || ||||||||||||| ||||||||||||||||||||    
T  41112871 acaatgtcacaagtgtttatgcaagtagataagctcaaataaa 41112829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 583877 - 583836
Alignment:
Q  46 agataaaataaagtctaactgttttcttataaactataagtt 87  Q
    ||||||||||||||| |||||||||| ||||| |||||||||    
T  583877 agataaaataaagtcaaactgttttcatataagctataagtt 583836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 7096258 - 7096217
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtc 60  Q
    ||||||||||| ||||||||||| || |||||||||||||||    
T  7096258 ttatgtataagctatttctataacaaaagataaaataaagtc 7096217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 10272542 - 10272489
Alignment:
Q  39 taataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||| ||||||||| ||||| || ||||||| ||||| ||||||||||||||    
T  10272542 taataaaagataaaattaagtcaaattgttttcgtataagctataagttgtttt 10272489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 12425510 - 12425583
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||  ||||| |||| ||| ||||||||||||||  || ||||||| ||||| ||||||| ||||||    
T  12425510 ttatgtataaactatttatatagtaaaagataaaataaagttaaattgttttcgtataagctataagctgtttt 12425583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 33459066 - 33459001
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    ||||||||||||||||||||||| || ||| ||||||||||  || |||||   ||||||||||||    
T  33459066 ttatgtataagttatttctataacaaaagacaaaataaagttgaattgtttatatataaactataa 33459001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 39128578 - 39128643
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    ||||||||||| || |||||||| || ||||||||||||||| || |||| ||  |||||||||||    
T  39128578 ttatgtataagctaattctataacaaaagataaaataaagtcaaattgttctcaaataaactataa 39128643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 39257517 - 39257445
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||| | ||| ||||||| || || |||||||||||| |||  ||||| ||||||||||||||||||||    
T  39257517 ttatgtatatgctatctctataacaaaaggtaaaataaagtcaaacc-ttttcatataaactataagttgtttt 39257445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 42569099 - 42569046
Alignment:
Q  31 tatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    ||||||||||  || |||||||||||||||||| ||||||| ||||| ||||||    
T  42569099 tatttctatagcaaaagataaaataaagtctaattgttttcgtataagctataa 42569046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 1943201 - 1943241
Alignment:
Q  30 ttatttctataataagagataaaataaagtctaactgtttt 70  Q
    ||||||||||||||| ||||||||||||||  |||||||||    
T  1943201 ttatttctataataaaagataaaataaagttaaactgtttt 1943241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 2933765 - 2933709
Alignment:
Q  36 ctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||| ||||||||| ||||  |||||||||| |||||  |||||||||||||    
T  2933765 ctataataaaagataaaatgaagttaaactgttttcatataagttataagttgtttt 2933709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 3290760 - 3290716
Alignment:
Q  162 caagtgtttatgctagtagataagctcaaataaaccaatttaaat 206  Q
    |||||| |||| ||||||| ||| |||||||||||||||||||||    
T  3290760 caagtgcttatactagtaggtaaactcaaataaaccaatttaaat 3290716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 8481157 - 8481197
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagt 59  Q
    |||||||||| |||||| |||||||| ||||||||||||||    
T  8481157 ttatgtataatttatttatataataaaagataaaataaagt 8481197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 12407792 - 12407752
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagt 59  Q
    ||||||||||| ||||||||||| || ||||||||||||||    
T  12407792 ttatgtataagctatttctataacaaaagataaaataaagt 12407752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 13244607 - 13244540
Alignment:
Q  24 tataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||| ||||||||||| || ||||| || |||||| |  ||||||| ||||||||||||||||||||    
T  13244607 tataagctatttctataa-aatagatataacaaagtcaacttgttttcgtataaactataagttgtttt 13244540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 19369270 - 19369318
Alignment:
Q  37 tataataagagataaaataaagtctaactgttttcttataaactataag 85  Q
    ||||| ||||||||||||||  || |||||||||| |||||||||||||    
T  19369270 tataacaagagataaaataagctcgaactgttttcatataaactataag 19369318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 40048411 - 40048371
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagt 59  Q
    ||||||||||||| ||||||||| || ||||||||||||||    
T  40048411 ttatgtataagttgtttctataacaaaagataaaataaagt 40048371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 40097533 - 40097462
Alignment:
Q  20 tatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    |||||||||||||||||||||| |  |||||||||| |||  || |||||| || ||| ||||||||||||||    
T  40097533 tatgtataagttatttctataacagaagataaaatagagttaaattgtttt-ttgtaatctataagttgtttt 40097462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 6873 - 6948
Alignment:
Q  119 aaaccacttatggacgtgtcgtaagcttttccaaacaatatcgcaagtgtttatgctagtagataagctcaaataa 194  Q
    |||| ||| |||||| |||| |||||| | ||||||| | || ||||||||||||||||||||||| |||||||||    
T  6873 aaacaactaatggacatgtcataagctctcccaaacagtctcacaagtgtttatgctagtagataaactcaaataa 6948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 4343 - 4280
Alignment:
Q  31 tatttctataataa-gagataaaataaagtctaactgttttcttataaactataagttgtttta 93  Q
    ||||||||||| || |||||||||||||||| ||| |||||| ||||||||||||| |||||||    
T  4343 tatttctataaaaaagagataaaataaagtcaaaccgttttcatataaactataagctgtttta 4280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 1205 - 1159
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaact 65  Q
    ||||||||||| ||||||||||| || ||||||||||||||| ||||    
T  1205 ttatgtataagctatttctataacaaaagataaaataaagtcaaact 1159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 2770 - 2816
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaact 65  Q
    ||||||||||| ||||||||||| || ||||||||||||||| ||||    
T  2770 ttatgtataagctatttctataacaaaagataaaataaagtcaaact 2816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 9906 - 9833
Alignment:
Q  19 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 92  Q
    ||||||||||||||||||||||| || | ||||||| ||||| ||  |||||| |||||  |||| ||||||||    
T  9906 ttatgtataagttatttctataacaaaaaataaaattaagtcaaaaagttttcatataagttataggttgtttt 9833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 20235 - 20292
Alignment:
Q  20 tatgtataagttatttctataataagagataaaataaagtctaactgttttcttataa 77  Q
    |||||||||||||||||| |||||| | ||||||||| ||| || ||||||| |||||    
T  20235 tatgtataagttatttctttaataaaacataaaataatgtcaaattgttttcatataa 20292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 51508 - 51572
Alignment:
Q  20 tatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 84  Q
    |||||||||||||||| ||||| || | ||||||||||||  || ||||||| ||| ||||||||    
T  51508 tatgtataagttatttttataacaaaatataaaataaagttaaattgttttcatatcaactataa 51572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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