View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18496_low_3 (Length: 572)
Name: NF18496_low_3
Description: NF18496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18496_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 522; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 522; E-Value: 0
Query Start/End: Original strand, 14 - 555
Target Start/End: Complemental strand, 30692421 - 30691880
Alignment:
| Q |
14 |
cagagaagatagagttagtttctctttcgagattagggtggacgttccaaagtgtctgtaacatttccacggcttctgctaatcaatctagattgggtag |
113 |
Q |
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| T |
30692421 |
cagagaagatagagttagtttctctttcgagattagggtggacgttccaaagtgtccgtaacatttccacggcttctgctaatcaatctagcttgggtag |
30692322 |
T |
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| Q |
114 |
caatagtggtggaaatggaaatgaaaaatctgatactaaacagaagaaggaagcttcgccggaggagtgtgatgaggctgttgaagacttgagtaccata |
213 |
Q |
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| T |
30692321 |
caacagtggtggaaatggaaatgaaaaatctgatactaaacagaagaaggaagcttcgccggaggagtgtgatgaggctgttgaagacttgagtaccata |
30692222 |
T |
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| Q |
214 |
aaagcgaaagctaaggctaaacaattacaagaaccacataagagtactgaatctattgtaaagaaattctgggctatgattctaggaattggtccagctt |
313 |
Q |
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| T |
30692221 |
aaagcgaaagctaaggctaaacaattacaagaaccacataagagtactgaatctattgtaaagaaattctgggctatgattctaggaattggtccagctt |
30692122 |
T |
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| Q |
314 |
tccgagctattttgttgatgagcaggttttaaatttattgcctcttgtttttaagtgtgatgtaaatacgtgtgtcagacttttctggtttttcattgcc |
413 |
Q |
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| T |
30692121 |
tccgagctattttgttgatgagcaggttttaaatttattgcctcttgtttttaagtgcgatgtaaatacgtgtgtcagacttttctggtttttcattgcc |
30692022 |
T |
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| Q |
414 |
tagggatgattgggcaaagaagttaagtcattggaaggatgaatttaaatccactctgcaacactattggtttggaacaaaactactttgggctgatgtt |
513 |
Q |
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| T |
30692021 |
taggaatgattgggcaaagaagttaagtcattggaaggatgaatttaaatccactctgcaacactattggtttggaacaaaactactttgggctgatgtt |
30691922 |
T |
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| Q |
514 |
aggataagctccagattattgttaaaacttgccaatggaaag |
555 |
Q |
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| T |
30691921 |
aggataagctccagattattgttaaaacttgccaatggaaag |
30691880 |
T |
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