View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18497_high_2 (Length: 286)
Name: NF18497_high_2
Description: NF18497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18497_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 19113794 - 19113957
Alignment:
| Q |
17 |
ttataggaaatggacaataaatataagtgtattatgcaaataatatctttttcaatcctttgtccttctcgagcgcctttcaaattttcaattttcctct |
116 |
Q |
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| T |
19113794 |
ttataggaaatggacaatgaataaaagtgtattatgcaaattatatctttttcaattctttgtccttctcgagcgccttttaaattttcaattttcctct |
19113893 |
T |
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| Q |
117 |
tattaaaattttgtaatctgaactagatttacacatagaccatacctatttgtgacagtgaaca |
180 |
Q |
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| T |
19113894 |
tattaaaattttgtaatctgaactagatttacacatagaccatacctatttgttacagtgaaca |
19113957 |
T |
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