View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18498_high_11 (Length: 268)
Name: NF18498_high_11
Description: NF18498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18498_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 19 - 264
Target Start/End: Original strand, 682139 - 682385
Alignment:
| Q |
19 |
accttacctcttatttatcctaaaaacagaaagtttcatatttcactttccctcgtataaaaatctttgctcatattaatag-agagagaaatgtttccc |
117 |
Q |
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| T |
682139 |
acctcacctcttatttatcctaaaaacagaaagtttcatatttcactttccctcgtataaaaatctttgctcatattattaatagagagaaatgtttccc |
682238 |
T |
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| Q |
118 |
taatttattcatccatggctagagaataaaaatagtactgttcctttagcatatagatttgaagtcaacctccatgaaaagnnnnnnnnttaataatagg |
217 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
682239 |
taatttgttcatccatggctagagaataaaaatagtactgttcctttagcatatagatttgaagtcaacctccatgaaaagaaaaaaaattaataatagg |
682338 |
T |
|
| Q |
218 |
gtccacttgatcatgttaatgattagtatattattttcttctctctc |
264 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
682339 |
gtccacttgatcatgttaatgattagtatattattttcttctctctc |
682385 |
T |
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