View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1849R-Insertion-6 (Length: 152)
Name: NF1849R-Insertion-6
Description: NF1849R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1849R-Insertion-6 |
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Alignment Details
Target: chr1 (Bit Score: 127; Significance: 6e-66; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 127; E-Value: 6e-66
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 38710566 - 38710432
Alignment:
| Q |
8 |
actacacactaggaatgagttgtataatgcctccaatatttcatataagattactctctctccttcaaagaaccattttttattaccacacatatggtta |
107 |
Q |
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| T |
38710566 |
actacacactaggaatgagttgtataatgcctccaatatttcttataagattactctctctccttcaaagaaccattttttattaccacacatatggtta |
38710467 |
T |
|
| Q |
108 |
ctacaacctaagtccaagaaccatgccttcttctt |
142 |
Q |
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||||||||||||||||||||| ||||||||||||| |
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| T |
38710466 |
ctacaacctaagtccaagaactatgccttcttctt |
38710432 |
T |
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