View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18500_high_27 (Length: 255)
Name: NF18500_high_27
Description: NF18500
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18500_high_27 |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 41333364 - 41333126
Alignment:
| Q |
1 |
tatgctcttagttgacggtagtccctattgcgggcctcattacattaccgaatatatgctatatgagcttaactttcaaattatgtggactctcccaaaa |
100 |
Q |
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| T |
41333364 |
tatgctcttagttgacggtagtccctattgcgggcctcattacattaccgaatatatgttatatgagcttaactttcaaattatgtggactctcccaaaa |
41333265 |
T |
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| Q |
101 |
tgtaaattgctaacgccgaatcttaacaagcatcttagttacttatagttttcttccctacttctttaagtaaagcaattaataagaacgtggaaacatt |
200 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41333264 |
tgtaaattgctaacgccgaatcttaacgagcatcttagttacttatagttttcttccctacttctttaagtaaagcaattaataagaacgtggaaacatt |
41333165 |
T |
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| Q |
201 |
tgaaattactaagaaaaagatatgatatgtaacgttcat |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
41333164 |
tgaaattactaagaaaaagatatgatatgtaacgttcat |
41333126 |
T |
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