View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18503_high_26 (Length: 246)
Name: NF18503_high_26
Description: NF18503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18503_high_26 |
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Alignment Details
Target: chr6 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 29181185 - 29180964
Alignment:
| Q |
1 |
tttgtactagttataatgtcatcatgcttgaaggtgattaagcaagacaatgctcatctatggcattaaagatttgacacttgagccaaaaatgattgca |
100 |
Q |
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| T |
29181185 |
tttgtactcgttataatatcatcatgcttgaaggtgattgagcaagacaatgctcatctatggcattaaagatttgacacttgagccaaaaatgattgca |
29181086 |
T |
|
| Q |
101 |
cattcaagcaaataaggtaatggtcaaggggttaccagctctaaaggagctagaaaaagcatgttgatatgcatgattggcatgcagcacaaagatgttg |
200 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29181085 |
cat-caagcaaataaggtaatggtcaaggggttaccagctctaaaggagctagaaaaagcatgttgatatgcatgattggcatgcagcacaaagatgttg |
29180987 |
T |
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| Q |
201 |
ttcctaagaaaacgccttataaa |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
29180986 |
ttcctaagaaaacgccttataaa |
29180964 |
T |
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