View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18503_low_21 (Length: 303)

Name: NF18503_low_21
Description: NF18503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18503_low_21
NF18503_low_21
[»] chr7 (32 HSPs)
chr7 (6-298)||(24440781-24441066)
chr7 (170-244)||(37410504-37410578)
chr7 (170-249)||(10474535-10474614)
chr7 (196-249)||(35195836-35195889)
chr7 (173-249)||(1649145-1649221)
chr7 (173-245)||(7465463-7465535)
chr7 (173-245)||(11808035-11808107)
chr7 (173-249)||(43635581-43635657)
chr7 (173-232)||(23799310-23799369)
chr7 (179-238)||(24427367-24427426)
chr7 (194-244)||(32814825-32814875)
chr7 (173-248)||(21285379-21285455)
chr7 (180-250)||(14818398-14818469)
chr7 (180-250)||(15265396-15265467)
chr7 (170-237)||(37995569-37995635)
chr7 (195-245)||(35498395-35498445)
chr7 (170-248)||(38032878-38032956)
chr7 (200-249)||(17305443-17305492)
chr7 (173-249)||(29658298-29658375)
chr7 (195-248)||(37917386-37917439)
chr7 (194-239)||(43712360-43712405)
chr7 (198-250)||(45267977-45268029)
chr7 (196-239)||(41012630-41012673)
chr7 (194-248)||(41139080-41139135)
chr7 (199-249)||(7392358-7392408)
chr7 (194-244)||(8147233-8147283)
chr7 (195-249)||(8766859-8766913)
chr7 (195-237)||(10020517-10020559)
chr7 (196-250)||(14772384-14772438)
chr7 (196-250)||(15222836-15222890)
chr7 (198-239)||(38328617-38328658)
chr7 (170-237)||(36176876-36176943)
[»] chr5 (33 HSPs)
chr5 (174-249)||(6806667-6806743)
chr5 (194-250)||(11246541-11246597)
chr5 (173-248)||(25660906-25660981)
chr5 (194-248)||(7147066-7147120)
chr5 (198-248)||(30255306-30255356)
chr5 (194-248)||(38040260-38040314)
chr5 (181-250)||(17557022-17557091)
chr5 (175-244)||(39684236-39684305)
chr5 (173-249)||(4985752-4985828)
chr5 (197-245)||(36742017-36742065)
chr5 (198-250)||(40250228-40250280)
chr5 (173-248)||(31556812-31556887)
chr5 (173-236)||(31907657-31907720)
chr5 (196-247)||(35813291-35813342)
chr5 (183-232)||(39955010-39955059)
chr5 (173-248)||(3102153-3102229)
chr5 (197-249)||(42553190-42553242)
chr5 (173-248)||(3535962-3536037)
chr5 (193-244)||(19648494-19648545)
chr5 (197-236)||(42781644-42781683)
chr5 (195-248)||(9963409-9963463)
chr5 (196-246)||(18101998-18102048)
chr5 (194-244)||(20186864-20186914)
chr5 (173-245)||(18872518-18872590)
chr5 (139-176)||(18872600-18872637)
chr5 (173-250)||(31280405-31280482)
chr5 (173-249)||(37303926-37304003)
chr5 (173-248)||(1463864-1463940)
chr5 (173-248)||(4674841-4674917)
chr5 (170-237)||(9408973-9409041)
chr5 (194-250)||(13862117-13862173)
chr5 (193-237)||(28768602-28768646)
chr5 (170-237)||(42801464-42801531)
[»] chr1 (52 HSPs)
chr1 (173-249)||(9768835-9768911)
chr1 (170-249)||(1721133-1721212)
chr1 (196-249)||(7906375-7906428)
chr1 (196-249)||(18003809-18003862)
chr1 (195-247)||(5684117-5684169)
chr1 (173-248)||(16182803-16182878)
chr1 (196-246)||(19536713-19536763)
chr1 (194-248)||(42908765-42908819)
chr1 (197-250)||(18179320-18179373)
chr1 (173-249)||(29491462-29491539)
chr1 (194-239)||(47645843-47645888)
chr1 (173-248)||(50859393-50859470)
chr1 (196-248)||(33176152-33176204)
chr1 (196-248)||(52961131-52961183)
chr1 (194-248)||(9527419-9527474)
chr1 (199-250)||(42801871-42801922)
chr1 (173-232)||(50199502-50199561)
chr1 (194-248)||(2643862-2643916)
chr1 (173-250)||(39238707-39238785)
chr1 (195-248)||(4146328-4146381)
chr1 (170-239)||(4605866-4605934)
chr1 (173-245)||(24661979-24662051)
chr1 (199-248)||(51917554-51917603)
chr1 (196-244)||(12553191-12553239)
chr1 (173-233)||(23336515-23336575)
chr1 (196-255)||(40678809-40678869)
chr1 (194-242)||(47141853-47141901)
chr1 (139-170)||(3341711-3341742)
chr1 (193-248)||(3569038-3569093)
chr1 (173-248)||(41677054-41677129)
chr1 (203-250)||(41998090-41998137)
chr1 (196-238)||(3341785-3341827)
chr1 (173-250)||(19976578-19976656)
chr1 (181-239)||(23750153-23750211)
chr1 (193-239)||(28417324-28417370)
chr1 (140-170)||(39433445-39433475)
chr1 (196-245)||(7015736-7015785)
chr1 (197-242)||(12489969-12490014)
chr1 (173-249)||(17350053-17350130)
chr1 (173-245)||(18923911-18923983)
chr1 (197-242)||(18976003-18976048)
chr1 (202-239)||(37693955-37693992)
chr1 (173-245)||(42831944-42832016)
chr1 (196-244)||(50581988-50582037)
chr1 (173-248)||(2052708-2052784)
chr1 (139-171)||(3276431-3276463)
chr1 (173-250)||(18911845-18911923)
chr1 (173-245)||(27745154-27745226)
chr1 (195-239)||(43020614-43020658)
chr1 (194-250)||(43327002-43327058)
chr1 (173-245)||(43837427-43837499)
chr1 (200-236)||(50575907-50575943)
[»] chr3 (42 HSPs)
chr3 (139-249)||(16874177-16874292)
chr3 (173-244)||(3973300-3973371)
chr3 (173-244)||(3996505-3996576)
chr3 (174-250)||(24160555-24160631)
chr3 (196-239)||(4010067-4010110)
chr3 (173-239)||(794034-794100)
chr3 (196-245)||(21142782-21142831)
chr3 (196-248)||(19137613-19137665)
chr3 (193-245)||(44591997-44592049)
chr3 (173-244)||(28951864-28951935)
chr3 (173-250)||(9624974-9625052)
chr3 (175-245)||(16277979-16278049)
chr3 (196-250)||(24130551-24130605)
chr3 (173-250)||(27183707-27183785)
chr3 (198-248)||(51412041-51412091)
chr3 (195-248)||(12236593-12236646)
chr3 (173-245)||(27066607-27066679)
chr3 (173-249)||(43774177-43774254)
chr3 (196-239)||(3993756-3993799)
chr3 (201-244)||(30745785-30745828)
chr3 (194-248)||(38555074-38555129)
chr3 (192-250)||(41767813-41767872)
chr3 (194-249)||(43911607-43911662)
chr3 (196-245)||(42271062-42271111)
chr3 (198-236)||(51017796-51017834)
chr3 (199-248)||(2995620-2995669)
chr3 (194-247)||(6951837-6951890)
chr3 (200-237)||(12143460-12143497)
chr3 (196-248)||(14868678-14868731)
chr3 (196-245)||(21249039-21249087)
chr3 (194-239)||(23237365-23237410)
chr3 (202-239)||(23305749-23305786)
chr3 (195-239)||(31576513-31576558)
chr3 (204-245)||(31680729-31680770)
chr3 (137-170)||(33206844-33206877)
chr3 (202-239)||(33533206-33533243)
chr3 (196-249)||(40160728-40160781)
chr3 (196-248)||(47191366-47191419)
chr3 (196-247)||(7448412-7448464)
chr3 (196-247)||(7456554-7456606)
chr3 (173-244)||(36331752-36331824)
chr3 (200-248)||(41430834-41430882)
[»] chr2 (34 HSPs)
chr2 (173-249)||(11133068-11133145)
chr2 (173-250)||(14307720-14307797)
chr2 (195-239)||(18065257-18065301)
chr2 (195-248)||(36277750-36277803)
chr2 (194-239)||(36386160-36386205)
chr2 (174-250)||(19352858-19352934)
chr2 (173-248)||(29664596-29664672)
chr2 (181-232)||(917325-917376)
chr2 (170-245)||(2114458-2114533)
chr2 (195-250)||(22355075-22355130)
chr2 (197-247)||(6496434-6496484)
chr2 (173-239)||(17239904-17239970)
chr2 (194-236)||(44132610-44132652)
chr2 (196-249)||(5772853-5772906)
chr2 (173-245)||(7086250-7086322)
chr2 (197-245)||(34830584-34830632)
chr2 (194-249)||(30876943-30876998)
chr2 (194-245)||(37065481-37065532)
chr2 (196-245)||(15690083-15690132)
chr2 (170-244)||(18089727-18089801)
chr2 (196-250)||(39118385-39118439)
chr2 (173-245)||(580809-580881)
chr2 (173-250)||(1244561-1244638)
chr2 (197-250)||(2057473-2057526)
chr2 (173-245)||(16973905-16973977)
chr2 (175-216)||(19052639-19052680)
chr2 (174-239)||(25050267-25050332)
chr2 (173-249)||(29034968-29035045)
chr2 (195-248)||(34107268-34107321)
chr2 (173-248)||(3037648-3037724)
chr2 (196-228)||(10602019-10602051)
chr2 (195-246)||(11461551-11461603)
chr2 (194-250)||(31089044-31089100)
chr2 (200-248)||(44487820-44487868)
[»] chr4 (45 HSPs)
chr4 (175-239)||(1589185-1589249)
chr4 (197-249)||(49039495-49039547)
chr4 (194-248)||(12820452-12820507)
chr4 (170-245)||(54264925-54265000)
chr4 (196-245)||(27921893-27921942)
chr4 (197-250)||(38657532-38657585)
chr4 (196-249)||(41492547-41492600)
chr4 (196-248)||(20166310-20166362)
chr4 (173-239)||(9084761-9084828)
chr4 (196-239)||(20610742-20610785)
chr4 (170-249)||(36045823-36045902)
chr4 (196-250)||(48512190-48512245)
chr4 (173-248)||(49319387-49319462)
chr4 (170-249)||(49743355-49743434)
chr4 (140-249)||(37728932-37729044)
chr4 (170-239)||(4419709-4419778)
chr4 (173-245)||(33076529-33076599)
chr4 (196-248)||(36008268-36008321)
chr4 (195-244)||(39293519-39293568)
chr4 (196-249)||(54854228-54854281)
chr4 (173-248)||(28520757-28520833)
chr4 (173-248)||(42411480-42411556)
chr4 (194-248)||(2565254-2565309)
chr4 (173-239)||(5635192-5635258)
chr4 (202-249)||(12585614-12585661)
chr4 (194-245)||(18740964-18741015)
chr4 (196-239)||(42758212-42758255)
chr4 (191-245)||(50657877-50657931)
chr4 (194-245)||(55266482-55266533)
chr4 (173-250)||(9692953-9693031)
chr4 (173-250)||(14149784-14149862)
chr4 (194-248)||(15185072-15185126)
chr4 (173-239)||(35230321-35230387)
chr4 (196-249)||(53815688-53815742)
chr4 (173-219)||(55967601-55967647)
chr4 (173-245)||(46734995-46735067)
chr4 (173-245)||(47017972-47018044)
chr4 (173-248)||(8690207-8690283)
chr4 (196-248)||(12796660-12796712)
chr4 (173-245)||(20753151-20753223)
chr4 (199-250)||(30152119-30152171)
chr4 (173-245)||(31601803-31601875)
chr4 (173-249)||(33359810-33359886)
chr4 (197-245)||(43049983-43050031)
chr4 (173-248)||(48968236-48968312)
[»] scaffold0168 (1 HSPs)
scaffold0168 (196-250)||(34082-34136)
[»] chr6 (37 HSPs)
chr6 (173-250)||(2945587-2945665)
chr6 (197-250)||(22730752-22730805)
chr6 (196-249)||(34524868-34524921)
chr6 (197-248)||(8175990-8176041)
chr6 (173-248)||(30833011-30833086)
chr6 (199-248)||(5134486-5134536)
chr6 (173-239)||(8309167-8309233)
chr6 (173-245)||(7563602-7563674)
chr6 (197-248)||(9031760-9031811)
chr6 (173-248)||(10455736-10455811)
chr6 (175-245)||(6025414-6025484)
chr6 (195-241)||(20858431-20858477)
chr6 (173-245)||(22389776-22389848)
chr6 (196-245)||(24256913-24256962)
chr6 (196-248)||(24470440-24470493)
chr6 (195-248)||(25064717-25064770)
chr6 (173-249)||(9443489-9443565)
chr6 (197-249)||(17176142-17176194)
chr6 (196-248)||(17305510-17305562)
chr6 (196-248)||(26669708-26669760)
chr6 (194-249)||(4844136-4844191)
chr6 (174-245)||(14258286-14258357)
chr6 (193-244)||(30668230-30668281)
chr6 (173-250)||(3448343-3448421)
chr6 (196-249)||(9064858-9064912)
chr6 (140-245)||(10373592-10373691)
chr6 (174-239)||(12127936-12128001)
chr6 (194-239)||(1488091-1488136)
chr6 (194-239)||(11982765-11982810)
chr6 (196-248)||(14981751-14981804)
chr6 (197-250)||(30905475-30905528)
chr6 (194-239)||(34571381-34571426)
chr6 (194-239)||(35190766-35190811)
chr6 (173-248)||(6143958-6144033)
chr6 (173-249)||(6219347-6219422)
chr6 (180-239)||(18631475-18631534)
chr6 (173-250)||(18904259-18904337)
[»] chr8 (31 HSPs)
chr8 (170-247)||(28979021-28979098)
chr8 (196-249)||(29937203-29937256)
chr8 (195-251)||(39432376-39432432)
chr8 (197-239)||(26657859-26657901)
chr8 (173-250)||(220388-220465)
chr8 (173-250)||(689543-689620)
chr8 (173-250)||(734011-734088)
chr8 (173-250)||(857907-857984)
chr8 (170-250)||(216170-216250)
chr8 (170-250)||(692730-692810)
chr8 (170-250)||(696939-697019)
chr8 (170-250)||(729793-729873)
chr8 (170-250)||(853688-853768)
chr8 (196-252)||(14012601-14012658)
chr8 (203-244)||(36593192-36593233)
chr8 (173-248)||(2800012-2800088)
chr8 (196-248)||(14011087-14011139)
chr8 (180-248)||(18577107-18577175)
chr8 (202-250)||(24572906-24572954)
chr8 (173-248)||(37154507-37154583)
chr8 (194-245)||(7345425-7345476)
chr8 (194-249)||(32940361-32940416)
chr8 (198-248)||(41793024-41793073)
chr8 (173-249)||(2696525-2696602)
chr8 (196-245)||(4955032-4955081)
chr8 (196-248)||(10292345-10292398)
chr8 (173-245)||(15042391-15042463)
chr8 (173-245)||(43468731-43468803)
chr8 (194-250)||(44070268-44070325)
chr8 (173-248)||(33982183-33982259)
chr8 (198-230)||(35779767-35779799)
[»] scaffold0712 (1 HSPs)
scaffold0712 (193-249)||(4513-4569)
[»] scaffold0709 (1 HSPs)
scaffold0709 (193-249)||(4533-4589)
[»] scaffold0126 (1 HSPs)
scaffold0126 (196-248)||(25010-25062)
[»] scaffold0118 (1 HSPs)
scaffold0118 (196-245)||(37377-37426)
[»] scaffold0112 (1 HSPs)
scaffold0112 (196-248)||(17980-18033)
[»] scaffold0308 (1 HSPs)
scaffold0308 (173-248)||(7069-7145)
[»] scaffold0119 (1 HSPs)
scaffold0119 (196-248)||(1033-1085)
[»] scaffold0939 (1 HSPs)
scaffold0939 (193-247)||(1977-2032)
[»] scaffold0809 (1 HSPs)
scaffold0809 (196-248)||(4854-4907)
[»] scaffold0036 (1 HSPs)
scaffold0036 (196-248)||(25019-25072)
[»] scaffold0024 (1 HSPs)
scaffold0024 (179-239)||(41798-41858)
[»] scaffold0070 (1 HSPs)
scaffold0070 (193-248)||(12558-12614)


Alignment Details
Target: chr7 (Bit Score: 142; Significance: 2e-74; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 6 - 298
Target Start/End: Original strand, 24440781 - 24441066
Alignment:
Q  6 cataatatgattaggttatgtacaactgcagagatcgatctttaaagatctcaagcgtgtttaaagaccatctcttccaaatgaggactatgtagttacc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||  ||| |||||||||||    
T  24440781 cataatatgattaggttatgtacaactgcagagatcgatctttaaagatctcaagcgtgtttaaagatcatctcttccgaatggcgacaatgtagttacc 24440880  T
Q  106 gagcaagatattgaactcnnnnnnnnnnnngtcggtcaggcagcctagtggctagaattcaccttgaggtgtccggggtttgaatcatgacccctgcata 205  Q
     |||||||||||||||||            ||| |||||| || ||||||||||||||| |||||| ||| ||||||||| ||| |   ||||||||||     
T  24440881 aagcaagatattgaactcttttttttttttgtcagtcaggtagtctagtggctagaatttaccttggggtatccggggttcgaa-cccaacccctgcat- 24440978  T
Q  206 taacaatgcatgtctctaccaactgagctatgcttacggggacaagatattgaactcttaacgtgttgaattttgcaaactaaagtattatgt 298  Q
         ||| ||||| ||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24440979 -----atgtatgtccctaccaactgaactatgctcacggggacaagatattgaactcttaaggtgttgaattttgcaaactaaagtattatgt 24441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 37410504 - 37410578
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacgg 244  Q
    |||||||||||| ||| ||| | |||||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  37410504 tgaggtgtccggagttcgaaccttgacccctgcatataacaatgcatgtccttaccaactgagctatgctcacgg 37410578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 249
Target Start/End: Original strand, 10474535 - 10474614
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||||||||||| | ||| |  |||||||||||||||||||| ||||||||||||||||| ||||||| ||| |||||    
T  10474535 tgaggtgtccgggggtcgaaccccgacccctgcatataacaatgtatgtctctaccaactgaactatgctcacgaggaca 10474614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 35195889 - 35195836
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||||||||    
T  35195889 cccctgcatataataatgcatgtccctgccaactgagctatgcttacggggaca 35195836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 1649221 - 1649145
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||| ||||| ||| | || |||||||||| |||||||||| || ||||||||||||||||||| |||||||||    
T  1649221 ggtgtccagggttcgaaccctggcccctgcataaaacaatgcatatccctaccaactgagctatgctcacggggaca 1649145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 7465535 - 7465463
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||| ||| |  | ||||||||||||| ||||||||||||| |||||||||||||||| |||||    
T  7465535 ggtgtccggggttcgaaccccggcccctgcatataataatgcatgtctctgccaactgagctatgctcacggg 7465463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 11808107 - 11808035
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||| ||| |  |||||||||||||||||||||||||| ||||||| ||||||| ||| |||||    
T  11808107 ggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctaccaattgagctaagctcacggg 11808035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 43635657 - 43635581
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||| ||| |  |||| |||||||||||||||||||| ||| ||||||||| |||||| |||||||||    
T  43635657 ggtgtccggggttcgaaccccgaccgctgcatataacaatgcatgtttctgccaactgagttatgctcacggggaca 43635581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 23799369 - 23799310
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgag 232  Q
    |||||||| |||| |||||  ||||||||||||||||||||||||||||| |||||||||    
T  23799369 ggtgtccgaggttcgaatcccgacccctgcatataacaatgcatgtctctgccaactgag 23799310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 24427426 - 24427367
Alignment:
Q  179 cggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgc 238  Q
    ||||||| ||| | |||||||||||||||||||||||||||||| ||||||||| |||||    
T  24427426 cggggttcgaaccttgacccctgcatataacaatgcatgtctctgccaactgagttatgc 24427367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 32814875 - 32814825
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacgg 244  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||| ||||    
T  32814875 gacccctgcatataataatgcatgtccctaccaactgagctatgctcacgg 32814825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 21285379 - 21285455
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||| |  | |||||||||||||||||||| |||| || |||||||||||||||| ||||||||    
T  21285379 ggtgtccggggttcgaaccccggcccctgcatataacaatgcattgtccctgccaactgagctatgctcacggggac 21285455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 250
Target Start/End: Original strand, 14818398 - 14818469
Alignment:
Q  180 ggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||||||| |  ||||||||||||||| |||||| |||| || |||||||||||||||| ||||||||||    
T  14818398 ggggtttgaaccccgacccctgcatataataatgcactgtccctgccaactgagctatgctcacggggacaa 14818469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 250
Target Start/End: Original strand, 15265396 - 15265467
Alignment:
Q  180 ggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||||||| |  ||||||||||||||| |||||| |||| || |||||||||||||||| ||||||||||    
T  15265396 ggggtttgaaccccgacccctgcatataataatgcactgtccctgccaactgagctatgctcacggggacaa 15265467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 37995569 - 37995635
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatg 237  Q
    ||||||||| |||||||||| |  | ||||||||||||||| ||||||||||| ||||||||||||||    
T  37995569 tgaggtgtctggggtttgaaccccggcccctgcatataaca-tgcatgtctctgccaactgagctatg 37995635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 35498445 - 35498395
Alignment:
Q  195 acccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    |||||||||||||| |||||||||| || ||||||||| ||||||||||||    
T  35498445 acccctgcatataataatgcatgtccctgccaactgagttatgcttacggg 35498395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 38032878 - 38032956
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||||||||| ||| |  | |||||| ||||||||||||||||| || ||||||||| |||| | ||||||||    
T  38032878 tgaggtgtccggggttcgaaccccggcccctgtatataacaatgcatgtccctgccaactgagttatgttcacggggac 38032956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 17305443 - 17305492
Alignment:
Q  200 tgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||||||||||||||||| || |||||||||||||||| |||| ||||    
T  17305443 tgcatataacaatgcatgtccctgccaactgagctatgctcacggagaca 17305492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 29658298 - 29658375
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||| ||| |  | |||||||||||||||||||| |||| || |||| ||||||||||| |||||||||    
T  29658298 ggtgtccggggttcgaaccccggcccctgcatataacaatgcattgtcgctgccaattgagctatgctcacggggaca 29658375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 37917439 - 37917386
Alignment:
Q  195 acccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||||  ||||||||  ||||||||||||||||||| ||||||||    
T  37917439 acccctgcatataattatgcatgttcctaccaactgagctatgctcacggggac 37917386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 43712360 - 43712405
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||||    
T  43712360 gacccctgtatataacaatgcatgtccctaccaactgagttatgct 43712405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 45267977 - 45268029
Alignment:
Q  198 cctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||| |||  |||||||| |||||||||||||||| ||||||||||    
T  45267977 cctgcatataataatatatgtctctgccaactgagctatgctcacggggacaa 45268029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 41012630 - 41012673
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    ||||| |||||||||||||||||| ||||||| |||||||||||    
T  41012630 cccctacatataacaatgcatgtccctaccaattgagctatgct 41012673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 41139135 - 41139080
Alignment:
Q  194 gacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||||| ||||||| ||| || |||||||||||||||| ||||||||    
T  41139135 gacccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 41139080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 249
Target Start/End: Original strand, 7392358 - 7392408
Alignment:
Q  199 ctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||||||||||  || |||| ||||||||||| |||||||||    
T  7392358 ctgcatataacaatgcatgttcctgccaattgagctatgctcacggggaca 7392408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 8147233 - 8147283
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacgg 244  Q
    ||||| |||||||||||||||||||| || |||| ||||||||||| ||||    
T  8147233 gacccttgcatataacaatgcatgtccctgccaattgagctatgctcacgg 8147283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 8766859 - 8766913
Alignment:
Q  195 acccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||||||||| |||||| ||||| || ||||||||| |||||| |||||||||    
T  8766859 acccctgcatatgacaatgaatgtccctgccaactgagttatgctcacggggaca 8766913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 10020517 - 10020559
Alignment:
Q  195 acccctgcatataacaatgcatgtctctaccaactgagctatg 237  Q
    ||||||||||||||||||||||||| ||  |||||||||||||    
T  10020517 acccctgcatataacaatgcatgtccctgtcaactgagctatg 10020559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 14772384 - 14772438
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||| ||| ||||||||||||||||| ||||||||| |||||| ||||| ||||    
T  14772384 cccctacatgtaacaatgcatgtctctgccaactgagttatgctcacgggaacaa 14772438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 15222836 - 15222890
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||| ||| ||||||||||||||||| ||||||||| |||||| ||||| ||||    
T  15222836 cccctacatgtaacaatgcatgtctctgccaactgagttatgctcacgggaacaa 15222890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 38328617 - 38328658
Alignment:
Q  198 cctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    |||||||||||||||| ||||| ||||||| |||||||||||    
T  38328617 cctgcatataacaatgtatgtccctaccaattgagctatgct 38328658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 36176943 - 36176876
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatg 237  Q
    |||||||||||||||||||| | |  ||||| ||||||| |||||| |||| |||||||||||||||||    
T  36176943 tgaggtgtccggggtttgaaccttagcccctacatataataatgcattgtc-ctaccaactgagctatg 36176876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 6806667 - 6806743
Alignment:
Q  174 gtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||||||||| |||||  |||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||    
T  6806667 gtgtccggggttcgaatcccgacccctgcatataacaatgcattgtctctgccaactgagctatgctcacggggaca 6806743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 11246541 - 11246597
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||||||||||||||||||||||| || |||||||||||||||| |||| |||||    
T  11246541 gacccctgcatataacaatgcatgtccctgccaactgagctatgctcacggtgacaa 11246597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 25660981 - 25660906
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    |||||| |||||| |||||  | ||||||||||||||||||||| || || |||||||||||||||| ||||||||    
T  25660981 ggtgtctggggttcgaatcccggcccctgcatataacaatgcatatccctgccaactgagctatgctcacggggac 25660906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 7147066 - 7147120
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||| ||||||||    
T  7147066 gacccctgcatataataatgcatgtccttaccaactgagctatgctcacggggac 7147120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 30255356 - 30255306
Alignment:
Q  198 cctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  30255356 cctgcatataacaatgcatgtctctaccaattgaggtatgcttacgaggac 30255306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 38040314 - 38040260
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||||||||||||||||||| || |||||||||||||||| | ||||||    
T  38040314 gacccctgcatataacaatgcatgtccctgccaactgagctatgctcatggggac 38040260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 17557091 - 17557022
Alignment:
Q  181 gggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||| |  ||||||| ||||||||||||||||||||| ||||||||| || ||| ||||||||||    
T  17557091 gggtttgaaccccgacccctacatataacaatgcatgtctctgccaactgagttaggctcacggggacaa 17557022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 244
Target Start/End: Complemental strand, 39684305 - 39684236
Alignment:
Q  175 tgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacgg 244  Q
    |||||||||||| |||| |||||||| |||||||||||||||||   |||||| ||||||||||| ||||    
T  39684305 tgtccggggtttaaatcctgacccctacatataacaatgcatgttcataccaattgagctatgctcacgg 39684236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 4985828 - 4985752
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||| ||||| ||| |  |||||||  |||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  4985828 ggtgtccagggttcgaaccccgacccctatatataacaatgcatgtctctacaaactgagttatacttacggggaca 4985752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 36742017 - 36742065
Alignment:
Q  197 ccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    |||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  36742017 ccctgcatataacaattcatgtctctgccaactgagctatgctcacggg 36742065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 40250228 - 40250280
Alignment:
Q  198 cctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||||||||||||||||||  || |||||||||||||||| ||||||||||    
T  40250228 cctgcatataacaatgcatgttactgccaactgagctatgctcacggggacaa 40250280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 31556887 - 31556812
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| |||    |||||||||||||||||||||||||| || | || ||||||||||| ||||||||    
T  31556887 ggtgtccggggttcgaactccgacccctgcatataacaatgcatgtccctgctaagtgagctatgctaacggggac 31556812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 236
Target Start/End: Complemental strand, 31907720 - 31907657
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctat 236  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||| || | |||||| ||||    
T  31907720 ggtgttcgaggtttgaaccatgacccctgcatataacaatgcatgtccctgcaaactgacctat 31907657  T

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Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 35813291 - 35813342
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacgggga 247  Q
    |||||||||||||||||||||||| ||  ||||||||||||||| |||||||    
T  35813291 cccctgcatataacaatgcatgtccctgtcaactgagctatgctcacgggga 35813342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 39955059 - 39955010
Alignment:
Q  183 gtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgag 232  Q
    ||||||| | |||||||||| |||||||||||||||| ||||||||||||    
T  39955059 gtttgaaccctgacccctgcgtataacaatgcatgtccctaccaactgag 39955010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 3102153 - 3102229
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggac 248  Q
    ||||| ||||||| ||| |  ||| ||| ||||||||||||||| ||| || |||||||||||||||||||||||||    
T  3102153 ggtgttcggggttcgaaccccgactcctacatataacaatgcattgtccctgccaactgagctatgcttacggggac 3102229  T

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Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 42553190 - 42553242
Alignment:
Q  197 ccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||||||||||||||||||||  |  ||||||||||||||| |||||||||    
T  42553190 ccctgcatataacaatgcatgtcgttgtcaactgagctatgctcacggggaca 42553242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 3535962 - 3536037
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||| |  | | |||| ||||||||||||||||| || |||||||| ||||||| ||||||||    
T  3535962 ggtgtccggggttcgaaccccggctcctgtatataacaatgcatgtccctgccaactgaactatgctcacggggac 3536037  T

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Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 19648545 - 19648494
Alignment:
Q  193 tgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacgg 244  Q
    ||||||||| |||||||||||||| || ||| ||||||||||||||| ||||    
T  19648545 tgacccctgtatataacaatgcatttccctatcaactgagctatgctcacgg 19648494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 42781644 - 42781683
Alignment:
Q  197 ccctgcatataacaatgcatgtctctaccaactgagctat 236  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  42781644 ccctgcatataacaatgcatgtccctgccaactgagctat 42781683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 9963463 - 9963409
Alignment:
Q  195 acccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||||||||||| |||| || ||||||||||||| || ||||||||    
T  9963463 acccctgcatataacaatgcattgtccctgccaactgagctatactcacggggac 9963409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 18101998 - 18102048
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacgggg 246  Q
    ||||||||||||| ||| |||||||||| |||| |||||||||| ||||||    
T  18101998 cccctgcatataataatacatgtctctatcaaccgagctatgctcacgggg 18102048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 20186914 - 20186864
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacgg 244  Q
    ||||||||||||||| |||||||||| || |||||||||| ||||| ||||    
T  20186914 gacccctgcatataataatgcatgtccctgccaactgagcaatgctcacgg 20186864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 18872590 - 18872518
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggg 245  Q
    ||||| ||||||| ||| |  ||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||    
T  18872590 ggtgttcggggttcgaaccccgacccctgcatataataatgcattgtc-ctaccaactgagctatgctcacggg 18872518  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 18872637 - 18872600
Alignment:
Q  139 ggtcaggcagcctagtggctagaattcaccttgaggtg 176  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  18872637 ggtcaggtagcctagtggctagaattcaccttaaggtg 18872600  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 31280405 - 31280482
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||| ||||||| ||| | || ||||||||||||  ||| |||||| || |||||||||||||||| ||||| ||||    
T  31280405 ggtgttcggggttcgaaccttggcccctgcatatagtaatacatgtccctgccaactgagctatgctcacgggaacaa 31280482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 37304003 - 37303926
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||| ||||| ||| |  ||||||||||||||| ||| ||| ||| || |||||||||||||||| |||||||||    
T  37304003 ggtgtccagggttcgaaccccgacccctgcatataataatacattgtccctgccaactgagctatgctcacggggaca 37303926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 1463940 - 1463864
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||| |  | ||||||||||||| |||||| |||| || |||||||||||||||| || |||||    
T  1463940 ggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacagggac 1463864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 4674841 - 4674917
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||| |  ||||||||||||||| |||||| |||| ||  ||||||||||||||| ||| ||||    
T  4674841 ggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctgtcaactgagctatgctcacgaggac 4674917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 9408973 - 9409041
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatg 237  Q
    |||||||||||||||| |||    |||||||||||||||||||||| |||| || ||||||||| ||||    
T  9408973 tgaggtgtccggggttcgaactccgacccctgcatataacaatgcattgtccctgccaactgagttatg 9409041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 13862173 - 13862117
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||||||||||||||| ||  |  ||||||| ||||||| ||||||||||    
T  13862173 gacccctgcatataacaatgcatatccatgtcaactgaactatgctcacggggacaa 13862117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 28768646 - 28768602
Alignment:
Q  193 tgacccctgcatataacaatgcatgtctctaccaactgagctatg 237  Q
    |||||| ||||||| |||||||||||| ||||||||||| |||||    
T  28768646 tgacccttgcatatgacaatgcatgtccctaccaactgaactatg 28768602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 42801464 - 42801531
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctc-taccaactgagctatg 237  Q
    |||||||||||||||| ||| |  ||||||||||||||| ||||||| | || ||||||||||||||||    
T  42801464 tgaggtgtccggggttcgaaccccgacccctgcatataataatgcat-tatcataccaactgagctatg 42801531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 9768835 - 9768911
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||| ||| |  |||||||||||||||||||||||||| || |||||||||||||||| |||||||||    
T  9768835 ggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgagctatgctcacggggaca 9768911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 249
Target Start/End: Complemental strand, 1721212 - 1721133
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||||||||||||| ||| |  | |||||||||||||||||||||||  ||||||||||||||||||| || ||||||    
T  1721212 tgaggtgtccggggttcgaaacccggcccctgcatataacaatgcatgttcctaccaactgagctatgctcacagggaca 1721133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 7906375 - 7906428
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  7906375 cccctgcatataacaatgcatgtccctaccaactgaactatgctcacggggaca 7906428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 18003862 - 18003809
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||||||||||||||||||||| || |||||||||||||||| |||||||||    
T  18003862 cccctgcatataacaatgcatgtccctgccaactgagctatgctcacggggaca 18003809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 5684169 - 5684117
Alignment:
Q  195 acccctgcatataacaatgcatgtctctaccaactgagctatgcttacgggga 247  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  5684169 acccctgcatataataatgcatgtctctgccaactgagctatgcttacaggga 5684117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 16182878 - 16182803
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||||||| |    ||||| ||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  16182878 ggtgtccggggtttgaaccccagcccctacatataataatgcatgtctctgccaactgagctatgcttacgcggac 16182803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 19536763 - 19536713
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacgggg 246  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||||||||||    
T  19536763 cccctacatatagcaatgcatgtccctaccaactgagctatgcttacgggg 19536713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 42908819 - 42908765
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||||||||||||||||||| || |||||||||||| ||| ||||||||    
T  42908819 gacccctgcatataacaatgcatgtccctgccaactgagctaagctcacggggac 42908765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 18179373 - 18179320
Alignment:
Q  197 ccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||||||||||||||| || ||||||||| |||||| ||||||||||    
T  18179373 ccctgcatataacaatgcatgtccctgccaactgagttatgctcacggggacaa 18179320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 29491539 - 29491462
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||| ||| |  ||||||||||||||| |||||| |||| || |||||||||||||||| |||||||||    
T  29491539 ggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctgccaactgagctatgctcacggggaca 29491462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 47645843 - 47645888
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||    
T  47645843 gacctctgcatataacaatgcatgtctctgccaactgagctatgct 47645888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 50859393 - 50859470
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagcta-tgcttacggggac 248  Q
    ||||||||||||||||| |  | |||||||||||| ||||||| ||||||||||||| |||||| |||||||||||||    
T  50859393 ggtgtccggggtttgaaccccggcccctgcatatatcaatgcattgtctctaccaaccgagctattgcttacggggac 50859470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 33176152 - 33176204
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||||||||||| || ||||||||||||||||||| | ||||||    
T  33176152 cccctgcatataacaatgcatatccctaccaactgagctatgctcaaggggac 33176204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 52961131 - 52961183
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||||||||||||||  | |||||||||||||||| ||||||||    
T  52961131 cccctgcatataacaatgcatgtccttgccaactgagctatgctcacggggac 52961183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 9527474 - 9527419
Alignment:
Q  194 gacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||||||||||||||| |||| || |||||||||||||||| ||||||||    
T  9527474 gacccctgcatataacaatgcattgtccctgccaactgagctatgctcacggggac 9527419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 42801922 - 42801871
Alignment:
Q  199 ctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||||||||||||||||  ||||||||||||| | ||||||||||    
T  42801922 ctgcatataacaatgcatgtctctgtcaactgagctatgttcacggggacaa 42801871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 50199502 - 50199561
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgag 232  Q
    ||||||||||||| ||| |  | |||||||||||||||||||||||| ||||||||||||    
T  50199502 ggtgtccggggttcgaaccccggcccctgcatataacaatgcatgtccctaccaactgag 50199561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 2643862 - 2643916
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||| ||||||||| ||||||||||||| |||||| ||||||||| ||||||||    
T  2643862 gacccatgcatataataatgcatgtctctgccaactaagctatgctcacggggac 2643916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 39238785 - 39238707
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||||| ||| |  | ||||||||||||| ||||||| ||| || |||||||||||||||| ||||||||||    
T  39238785 ggtgtccggggttcgaacctcggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggacaa 39238707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 4146381 - 4146328
Alignment:
Q  195 acccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||||||||||||||||| |||  ||||||||||||||| ||| ||||    
T  4146381 acccctgcatataacaatgcatgtttctgtcaactgagctatgctcacgaggac 4146328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 4605866 - 4605934
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    ||||||||| | |||||||| | || |||||||||||||||||||||||||||  |||||||| ||||||    
T  4605866 tgaggtgtctgaggtttgaa-cttggcccctgcatataacaatgcatgtctctgtcaactgagttatgct 4605934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 24662051 - 24661979
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggg 245  Q
    |||||| |||||| ||||| |||||||||||||||| |||||| |||| ||||||| ||||||||||| |||||    
T  24662051 ggtgtctggggttcgaatcctgacccctgcatataataatgcattgtc-ctaccaattgagctatgctcacggg 24661979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 51917554 - 51917603
Alignment:
Q  199 ctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||| ||||||||||| | |||||||||||||||| ||||||||    
T  51917554 ctgcatataataatgcatgtctatgccaactgagctatgctcacggggac 51917603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 12553239 - 12553191
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacgg 244  Q
    |||||||||||||||||||||||  |||||||||||||| |||| ||||    
T  12553239 cccctgcatataacaatgcatgttcctaccaactgagctgtgctcacgg 12553191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 23336515 - 23336575
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagc 233  Q
    ||||||||| ||||||| ||  ||||||||||||||||||||||||  |||||| ||||||    
T  23336515 ggtgtccggagtttgaaccacaacccctgcatataacaatgcatgttgctaccacctgagc 23336575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 40678869 - 40678809
Alignment:
Q  196 cccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggacaagatat 255  Q
    ||||||||||||| ||||||| ||| || |||||||||||||||| |||||||||| ||||    
T  40678869 cccctgcatataataatgcattgtccctgccaactgagctatgctcacggggacaacatat 40678809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 47141853 - 47141901
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttac 242  Q
    |||||||||||||||||||||||||| ||  |||||||| |||||||||    
T  47141853 gacccctgcatataacaatgcatgtccctgtcaactgagttatgcttac 47141901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 170
Target Start/End: Original strand, 3341711 - 3341742
Alignment:
Q  139 ggtcaggcagcctagtggctagaattcacctt 170  Q
    ||||||||||||||||||||||||||||||||    
T  3341711 ggtcaggcagcctagtggctagaattcacctt 3341742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 3569093 - 3569038
Alignment:
Q  193 tgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||| |||||||||||||||||| || |||||||| |||| ||||| |||||    
T  3569093 tgacccctacatataacaatgcatgtccctgccaactgaactatacttacagggac 3569038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 41677129 - 41677054
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||| ||| ||| |  |||||| |||||||| |||| |||||||| |||||||||||| ||| ||||||||    
T  41677129 ggtgtccggagttcgaaccccgacccccgcatataataatgaatgtctctgccaactgagctacgctcacggggac 41677054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 41998137 - 41998090
Alignment:
Q  203 atataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||| |||||||||||||||||||| || |||||| ||||||||||    
T  41998137 atataataatgcatgtctctaccaacttagttatgctcacggggacaa 41998090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 3341785 - 3341827
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgc 238  Q
    ||||||||||||| |||||||||| || |||||||||||||||    
T  3341785 cccctgcatataataatgcatgtccctgccaactgagctatgc 3341827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 19976578 - 19976656
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||||| ||| |  | |||||||||||||| || ||| ||| || |||||||||||||||| ||||||||||    
T  19976578 ggtgtccggggttcgaaccccggcccctgcatataaccatacattgtccctgccaactgagctatgctcacggggacaa 19976656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 23750211 - 23750153
Alignment:
Q  181 gggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    ||||||||| |  ||||| || |||||||||||||| || |||||||||||||||||||    
T  23750211 gggtttgaaccccgacccatgtatataacaatgcatatccctaccaactgagctatgct 23750153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 28417324 - 28417370
Alignment:
Q  193 tgacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    ||||| |||||||||| ||||||||||||| ||||||||| ||||||    
T  28417324 tgacctctgcatataagaatgcatgtctctgccaactgagttatgct 28417370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 170
Target Start/End: Complemental strand, 39433475 - 39433445
Alignment:
Q  140 gtcaggcagcctagtggctagaattcacctt 170  Q
    |||||||||||||||||||||||||||||||    
T  39433475 gtcaggcagcctagtggctagaattcacctt 39433445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 7015736 - 7015785
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||| |||||||||||||||||| |  |||||||||||||||| |||||    
T  7015736 cccctacatataacaatgcatgtcccagccaactgagctatgctcacggg 7015785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 12489969 - 12490014
Alignment:
Q  197 ccctgcatataacaatgcatgtctctaccaactgagctatgcttac 242  Q
    |||||||||||| ||||||||||| | |||||||||||||| ||||    
T  12489969 ccctgcatataaaaatgcatgtctttgccaactgagctatgtttac 12490014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 17350130 - 17350053
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||| ||| |  | ||||||||||||| |||||| |||| || ||||||||||||| || |||||||||    
T  17350130 ggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatactcacggggaca 17350053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 18923911 - 18923983
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggg 245  Q
    |||||||| |||| ||| | ||| |||||||||||| ||||||| ||| ||||||||||||||||||| |||||    
T  18923911 ggtgtccgaggttcgaaccctgaaccctgcatataataatgcattgtc-ctaccaactgagctatgctcacggg 18923983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 18976048 - 18976003
Alignment:
Q  197 ccctgcatataacaatgcatgtctctaccaactgagctatgcttac 242  Q
    ||||||||||||||||||||||||||  ||| ||||||||| ||||    
T  18976048 ccctgcatataacaatgcatgtctctgacaattgagctatgtttac 18976003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 37693955 - 37693992
Alignment:
Q  202 catataacaatgcatgtctctaccaactgagctatgct 239  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  37693955 catataacaatgtatgtctctaccgactgagctatgct 37693992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 42832016 - 42831944
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||||||| |    ||||||||||||| |||||| |||| ||||||||||||||||||| |||||    
T  42832016 ggtgtccggggtttgaaccccagcccctgcatataataatgcaatgtc-ctaccaactgagctatgctcacggg 42831944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 50581988 - 50582037
Alignment:
Q  196 cccctgcatataacaatgcat-gtctctaccaactgagctatgcttacgg 244  Q
    |||||||||||  |||||||| ||||||||||||||||||||||| ||||    
T  50581988 cccctgcatatttcaatgcattgtctctaccaactgagctatgctcacgg 50582037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 2052708 - 2052784
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||| |  | ||||||||||| | ||||||| ||| || |||||||||||||||| ||||||||    
T  2052708 ggtgtccggggttcgaaccccggcccctgcatatgataatgcattgtccctgccaactgagctatgctcacggggac 2052784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 3276431 - 3276463
Alignment:
Q  139 ggtcaggcagcctagtggctagaattcaccttg 171  Q
    ||||||| |||||||||||||||||||||||||    
T  3276431 ggtcaggtagcctagtggctagaattcaccttg 3276463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 18911923 - 18911845
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca--tgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||||| ||| | |||||||||||||||| ||| ||  |||| ||||||||||||| | ||| ||||||||||    
T  18911923 ggtgtccggggttcgaaccctgacccctgcatataa-aattcatttgtccctaccaactgagcaaagctcacggggacaa 18911845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 27745226 - 27745154
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||| ||| |  || |||||||||||| ||||||| |  ||||||| ||||||||||| |||||    
T  27745226 ggtgtccggggttcgaaccccgatccctgcatataataatgcattttcctaccaaatgagctatgctcacggg 27745154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 43020658 - 43020614
Alignment:
Q  195 acccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    |||||||||||||| |||||||||| || ||||| ||||||||||    
T  43020658 acccctgcatataataatgcatgtccctgccaaccgagctatgct 43020614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 43327058 - 43327002
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||||||||||| |||||| || | ||||||| |||||| ||| ||||||    
T  43327058 gacccctgcatataacaatacatgtccctgcaaactgagttatgctcacgaggacaa 43327002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 43837427 - 43837499
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||||| ||||| ||| |  |||||||||||| || ||||||| |  ||||||||||||||||||| |||||    
T  43837427 ggtgtccagggttcgaaccccgacccctgcatagaagaatgcattttcctaccaactgagctatgctcacggg 43837499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 50575943 - 50575907
Alignment:
Q  200 tgcatataacaatgcatgtctctaccaactgagctat 236  Q
    |||||||||||||||||||| || |||||||||||||    
T  50575943 tgcatataacaatgcatgtcccttccaactgagctat 50575907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 249
Target Start/End: Original strand, 16874177 - 16874292
Alignment:
Q  139 ggtcaggcagcctagtggctagaattcacctt-----gaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagc 233  Q
    ||||||| ||||||||||||| ||||||||||     | |||||||| |||| ||| |  | |||||||||||||||||||||||| || ||||||||||    
T  16874177 ggtcaggtagcctagtggctataattcaccttcttttggggtgtccgcggttcgaacctcggcccctgcatataacaatgcatgtccctgccaactgagc 16874276  T
Q  234 tatgcttacggggaca 249  Q
    |||||| |||||||||    
T  16874277 tatgctcacggggaca 16874292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 3973371 - 3973300
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacgg 244  Q
    |||||||||||||  ||||  | |||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  3973371 ggtgtccggggttcaaatcgcggcccctgcatataacaatgcatgtccctaccaactgagctatgctcacgg 3973300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 3996505 - 3996576
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacgg 244  Q
    |||||||||||||  ||||  | |||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  3996505 ggtgtccggggttcaaatcgcggcccctgcatataacaatgcatgtccctaccaactgagctatgctcacgg 3996576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 24160555 - 24160631
Alignment:
Q  174 gtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||||||||| ||| |  ||||||||||||||||| ||||||||||| ||||||||| |||||| ||| ||||||    
T  24160555 gtgtccggggttcgaaccccgacccctgcatataacagtgcatgtctctgccaactgagttatgctcacgaggacaa 24160631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 4010067 - 4010110
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  4010067 cccctgcatataacaatgcatgtccctaccaactgagctatgct 4010110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 794034 - 794100
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    ||||||||||||| |||||  | |||| ||||||||||||||||||||||| || ||||||||||||    
T  794034 ggtgtccggggttcgaatcccggcccccgcatataacaatgcatgtctctatcagctgagctatgct 794100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 21142782 - 21142831
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||||||||    
T  21142782 cccctgcatataacaatgcacgtccctaccaactaagctatgcttacggg 21142831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 19137665 - 19137613
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||||||||||||||||  || |||||||||||||||| ||||||||    
T  19137665 cccctgcatataacaatgcatgttcctgccaactgagctatgctcacggggac 19137613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 44592049 - 44591997
Alignment:
Q  193 tgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||||||||||||||||  ||||||||||||||| ||| |||||    
T  44592049 tgacccctgcatataacaatgcatgttcctaccaactgagctaagctcacggg 44591997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 28951935 - 28951864
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacgg 244  Q
    ||||| ||||||| ||| | |||||||||||||||| ||||||||| ||| ||||||||| |||||| ||||    
T  28951935 ggtgttcggggttcgaaccctgacccctgcatataataatgcatgtatctgccaactgagttatgctcacgg 28951864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 9625052 - 9624974
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||||| ||| |  | ||||||||||||| ||||||| ||| || |||||||||||||||| ||||||||||    
T  9625052 ggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggacaa 9624974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 245
Target Start/End: Original strand, 16277979 - 16278049
Alignment:
Q  175 tgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||||| ||| |||||  ||||||||||||||| ||||||||   ||||||||||||||||||| |||||    
T  16277979 tgtccggagttcgaatcccgacccctgcatataataatgcatggtcctaccaactgagctatgctcacggg 16278049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 24130605 - 24130551
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||||||||||||||| ||||| || ||||||||| |||||| ||||||||||    
T  24130605 cccctgcatataacaatgtatgtccctgccaactgagttatgctcacggggacaa 24130551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 27183707 - 27183785
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||||| ||| |  | ||||||||||||| ||||||| ||| || |||||||||||||||| ||||||||||    
T  27183707 ggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggacaa 27183785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 51412041 - 51412091
Alignment:
Q  198 cctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||||||||||||||| || |||||||| ||||||||||| ||||    
T  51412041 cctgcatataacaatgcatgtccctgccaactgaactatgcttacgaggac 51412091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 12236646 - 12236593
Alignment:
Q  195 acccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||||||| |||||||||| || |||||||||||| ||| ||||||||    
T  12236646 acccctgcatataataatgcatgtccctgccaactgagctacgctcacggggac 12236593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 27066679 - 27066607
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctc-taccaactgagctatgcttacggg 245  Q
    ||||||||||||| ||| | |||||||||||||||| |||| || | || ||||||||||||||||||||||||    
T  27066679 ggtgtccggggttcgaaccctgacccctgcatataataatg-atttatcttaccaactgagctatgcttacggg 27066607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 43774254 - 43774177
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||| |||||| ||| |  |||||||||||||||||||||| |||| || ||||||||||||| || |||||||||    
T  43774254 ggtgtctggggttcgaaccccgacccctgcatataacaatgcattgtccctgccaactgagctatactcacggggaca 43774177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 3993756 - 3993799
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    |||||||||||||||||||||||| ||  |||||||||||||||    
T  3993756 cccctgcatataacaatgcatgtccctctcaactgagctatgct 3993799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 30745785 - 30745828
Alignment:
Q  201 gcatataacaatgcatgtctctaccaactgagctatgcttacgg 244  Q
    ||||||||||||||||||| || |||||||||||||||| ||||    
T  30745785 gcatataacaatgcatgtccctgccaactgagctatgctcacgg 30745828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 38555074 - 38555129
Alignment:
Q  194 gacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||||| |||||| ||||||| |||||||| ||||||| ||||||||    
T  38555074 gacccctgcatataataatgcattgtctctgccaactgaactatgctcacggggac 38555129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 41767813 - 41767872
Alignment:
Q  192 atgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||||||||||||||||||||| |||  || |||||||| ||||||| ||||||||||    
T  41767813 atgacccctgcatataacaatgcattgttcctgccaactgaactatgctcacggggacaa 41767872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 43911662 - 43911607
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||||||||||||||||  |||||||| |||||| ||||||||| | |||||||    
T  43911662 gacccctgcatataacaatatatgtctctgccaactaagctatgctcatggggaca 43911607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 42271062 - 42271111
Alignment:
Q  196 cccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggg 245  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| |||||    
T  42271062 cccctgcatataacaatgcattgtc-ctaccaactgagctatgctcacggg 42271111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 51017834 - 51017796
Alignment:
Q  198 cctgcatataacaatgcatgtctctaccaactgagctat 236  Q
    |||||||||||||||||||||| || |||||||||||||    
T  51017834 cctgcatataacaatgcatgtccctgccaactgagctat 51017796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 2995669 - 2995620
Alignment:
Q  199 ctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||||  |||||||| ||| |||||||||||| ||||||||    
T  2995669 ctgcatataacaatatatgtctctgccagctgagctatgctcacggggac 2995620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 6951837 - 6951890
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacgggga 247  Q
    ||||||||||||||| |||||||||| ||  |||||||| |||||| |||||||    
T  6951837 gacccctgcatataataatgcatgtccctgtcaactgagttatgctcacgggga 6951890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 12143460 - 12143497
Alignment:
Q  200 tgcatataacaatgcatgtctctaccaactgagctatg 237  Q
    |||||||||||||||||||| || ||||||||||||||    
T  12143460 tgcatataacaatgcatgtccctgccaactgagctatg 12143497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 14868731 - 14868678
Alignment:
Q  196 cccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||||||| ||| || |||||||||||||||| ||||||||    
T  14868731 cccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 14868678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 21249039 - 21249087
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||| ||| |||||||||  |||||||||||||||||||||    
T  21249039 cccctgcatataataat-catgtctctgtcaactgagctatgcttacggg 21249087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 23237410 - 23237365
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    ||||||| ||||||| |||||||||| || ||||||||||||||||    
T  23237410 gacccctacatataataatgcatgtccctgccaactgagctatgct 23237365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 23305786 - 23305749
Alignment:
Q  202 catataacaatgcatgtctctaccaactgagctatgct 239  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  23305786 catataacaatgcatgtccctaccaactgagttatgct 23305749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 31576558 - 31576513
Alignment:
Q  195 acccctgcatataacaatgca-tgtctctaccaactgagctatgct 239  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||    
T  31576558 acccctgcatataacaatgcattgttcctaccaactgagctatgct 31576513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 31680770 - 31680729
Alignment:
Q  204 tataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    |||||||||||||||| |||| |||||||||||||| |||||    
T  31680770 tataacaatgcatgtccctacaaactgagctatgctcacggg 31680729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 170
Target Start/End: Complemental strand, 33206877 - 33206844
Alignment:
Q  137 tcggtcaggcagcctagtggctagaattcacctt 170  Q
    ||||||||| ||||||||||||||||||||||||    
T  33206877 tcggtcaggtagcctagtggctagaattcacctt 33206844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 33533243 - 33533206
Alignment:
Q  202 catataacaatgcatgtctctaccaactgagctatgct 239  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  33533243 catataacaatgcatgtctctgccaactgagttatgct 33533206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 40160781 - 40160728
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    |||| ||||||||||||||||||| || |||| ||||||||||| ||| |||||    
T  40160781 ccccggcatataacaatgcatgtccctgccaattgagctatgctcacgaggaca 40160728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 47191419 - 47191366
Alignment:
Q  196 cccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||||||| ||| || |||||||||||||||| ||||||||    
T  47191419 cccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 47191366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 7448412 - 7448464
Alignment:
Q  196 cccctgcatataacaatgcat-gtctctaccaactgagctatgcttacgggga 247  Q
    ||||||||||||| ||||||| ||| ||| ||||||||||||||| |||||||    
T  7448412 cccctgcatataataatgcattgtccctatcaactgagctatgctcacgggga 7448464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 7456554 - 7456606
Alignment:
Q  196 cccctgcatataacaatgcat-gtctctaccaactgagctatgcttacgggga 247  Q
    ||||||||||||| ||||||| ||| ||| ||||||||||||||| |||||||    
T  7456554 cccctgcatataataatgcattgtccctatcaactgagctatgctcacgggga 7456606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 36331752 - 36331824
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacgg 244  Q
    ||||||||||||| ||| |  ||||||||||||||| |||||| |||| || |||| ||||||||||| ||||    
T  36331752 ggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctgccaattgagctatgctcacgg 36331824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 41430834 - 41430882
Alignment:
Q  200 tgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||| ||||||| || |||||||||||| |||||| ||||||||    
T  41430834 tgcatataataatgcatatccctaccaactgagttatgctcacggggac 41430882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 11133145 - 11133068
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||| ||| |  |||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  11133145 ggtgtccggggttcgaaccccgacccctgcatataacaatgcattgtccctaccaactgagctatgctcacggggaca 11133068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 14307720 - 14307797
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||| ||||||| ||| |  |||||||||||||||||||||||||| ||||||||||||| ||||| |||| |||||    
T  14307720 ggtgttcggggttcgaacctcgacccctgcatataacaatgcatgtccctaccaactgagccatgctcacggagacaa 14307797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 18065301 - 18065257
Alignment:
Q  195 acccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  18065301 acccctgcatataacaatgcatgcctctaccaactgagctatgct 18065257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 36277750 - 36277803
Alignment:
Q  195 acccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    |||||| |||||||||||||||||| || |||||||||||||||| ||||||||    
T  36277750 acccctacatataacaatgcatgtcactgccaactgagctatgctcacggggac 36277803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 36386160 - 36386205
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    ||||||||||||||||||||||| || |||||||||||||||||||    
T  36386160 gacccctgcatataacaatgcatatccctaccaactgagctatgct 36386205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 19352934 - 19352858
Alignment:
Q  174 gtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||||  |||| ||||| ||||||||||||||||||||||||  |||||||| |||| | ||| ||||||    
T  19352934 gtgtccggggttcaaatcctgacctctgcatataacaatgcatgtctctgtcaactgagttatgttcacgaggacaa 19352858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 29664672 - 29664596
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||| |||||| |  |||||||||||||||||||||| |||| || |||| ||||||||||| ||||||||    
T  29664672 ggtgtccgggatttgaaccccgacccctgcatataacaatgcattgtccctgccaattgagctatgctcacggggac 29664596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 917325 - 917376
Alignment:
Q  181 gggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgag 232  Q
    ||||| |||||  ||||||||||||||| |||||||||||||||||||||||    
T  917325 gggttcgaatcccgacccctgcatataataatgcatgtctctaccaactgag 917376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 2114458 - 2114533
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    |||||||||||||||| ||| |  ||||||| ||||||| |||||||   |||||||||||||||||||| |||||    
T  2114458 tgaggtgtccggggttcgaaccccgacccctacatataataatgcattgttctaccaactgagctatgctcacggg 2114533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 22355130 - 22355075
Alignment:
Q  195 acccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||| |||||||||||||||  | |||||||||||||||| ||||||||||    
T  22355130 acccctgcacataacaatgcatgtccttgccaactgagctatgctcacggggacaa 22355075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 6496484 - 6496434
Alignment:
Q  197 ccctgcatataacaatgcatgtctctaccaactgagctatgcttacgggga 247  Q
    |||| |||||||||||||||||| || |||||||||||||||| |||||||    
T  6496484 ccctacatataacaatgcatgtcccttccaactgagctatgctaacgggga 6496434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 17239970 - 17239904
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    |||||||| |||| |||||  ||||||||||||||| |||||||   ||||||||||||||||||||    
T  17239970 ggtgtccgaggttcgaatcccgacccctgcatataataatgcattgttctaccaactgagctatgct 17239904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 44132610 - 44132652
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctat 236  Q
    |||| |||||||||||||||||||||||| |||||||||||||    
T  44132610 gacctctgcatataacaatgcatgtctctgccaactgagctat 44132652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 5772906 - 5772853
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||||||| ||||||  | |||||||||||||||| |||||||||    
T  5772906 cccctgcatataacaatacatgtccttgccaactgagctatgctcacggggaca 5772853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 7086322 - 7086250
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||| ||||||| |||||  | ||||||||||||| |||||||  | ||||||||||||||||||| |||||    
T  7086322 ggtgttcggggttcgaatcccggcccctgcatataataatgcattgccctaccaactgagctatgctcacggg 7086250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 34830632 - 34830584
Alignment:
Q  197 ccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    |||||||||||||||||||| |||||||||| |||||||| || |||||    
T  34830632 ccctgcatataacaatgcatatctctaccaagtgagctatactcacggg 34830584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 30876998 - 30876943
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||||||||| |||| | ||||||||| ||||||||| |||| ||||    
T  30876998 gacccctgcatataacaatacatgaccctaccaactaagctatgctcacggtgaca 30876943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 37065481 - 37065532
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    |||| |||||||||||||||||||||  ||||||| |||||||||| |||||    
T  37065481 gaccactgcatataacaatgcatgtccataccaacagagctatgctcacggg 37065532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 15690083 - 15690132
Alignment:
Q  196 cccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggg 245  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| |||||    
T  15690083 cccctgcatataacaatgcattgtc-ctaccaactgagctatgctcacggg 15690132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 18089801 - 18089727
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacgg 244  Q
    ||||||||| |||||| |||   || ||||||||||  | ||||||||||||| |||||||||||||||| ||||    
T  18089801 tgaggtgtctggggttcgaactctggcccctgcatagtataatgcatgtctctgccaactgagctatgctcacgg 18089727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 39118439 - 39118385
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||||||||||||||| ||||| |||||||||||| || ||| ||| ||||||    
T  39118439 cccctgcatataacaatgtatgtccctaccaactgagttacgctcacgaggacaa 39118385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 580809 - 580881
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||| ||| |  | ||||||||||||| ||||||| ||| ||||||||||||||||||| |||||    
T  580809 ggtgtccggggttcgaaccccggcccctgcatataataatgcattgtc-ctaccaactgagctatgctcacggg 580881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 1244638 - 1244561
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||||| ||| |   ||||||||||||| ||||| ||||| || |||||||| ||||||| ||| ||||||    
T  1244638 ggtgtccggggttcgaacccccacccctgcatatagcaatgtatgtccctgccaactgaactatgctcacgaggacaa 1244561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 2057526 - 2057473
Alignment:
Q  197 ccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||||||||| || || || |||||||||||||||| |||| |||||    
T  2057526 ccctgcatataacaatgtatatccctgccaactgagctatgctcacggtgacaa 2057473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 16973977 - 16973905
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||| ||||| | |||||||||||||| ||| || |||| |||| |||||||||||||| |||||    
T  16973977 ggtgtccggggttcgaatcctaacccctgcatataataatccattgtc-ctacaaactgagctatgctcacggg 16973905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 19052639 - 19052680
Alignment:
Q  175 tgtccggggtttgaatcatgacccctgcatataacaatgcat 216  Q
    ||||||||||| ||||| |||||||||||||||| |||||||    
T  19052639 tgtccggggttcgaatcctgacccctgcatataataatgcat 19052680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 25050267 - 25050332
Alignment:
Q  174 gtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    ||||| |||||| |||||  ||||||||||||||| |||||||    |||||||||||||||||||    
T  25050267 gtgtctggggttcgaatcccgacccctgcatataataatgcattatcctaccaactgagctatgct 25050332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 29035045 - 29034968
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||| ||| |  | ||||||||||||| |||||| |||| || |||| ||||||||||| |||||||||    
T  29035045 ggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaagtgagctatgctcacggggaca 29034968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 34107321 - 34107268
Alignment:
Q  195 acccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||||  || |||||| || |||||||||||||||| ||||||||    
T  34107321 acccctgcatataattatacatgtccctgccaactgagctatgctcacggggac 34107268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 3037648 - 3037724
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||| |  | |||||||||||||||||||| |||| |  ||||||||| |||||||||| ||||    
T  3037648 ggtgtccggggttcgaaccccggcccctgcatataacaatgcattgtcccagccaactgagttatgcttacgaggac 3037724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 10602051 - 10602019
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaac 228  Q
    ||||||||||||||||||||||||||| |||||    
T  10602051 cccctgcatataacaatgcatgtctctgccaac 10602019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 11461603 - 11461551
Alignment:
Q  195 acccctgcatataacaatgca-tgtctctaccaactgagctatgcttacgggg 246  Q
    ||||||||||||||||||||| | |||| ||||| ||||||| ||||||||||    
T  11461603 acccctgcatataacaatgcattatctccaccaattgagctaagcttacgggg 11461551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 31089044 - 31089100
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||| |||| || |||||||||||||| |||||||| |||||| |||| |||||    
T  31089044 gacccctacataaaataatgcatgtctctatcaactgaggtatgctcacggagacaa 31089100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 44487820 - 44487868
Alignment:
Q  200 tgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||| |||||||||| ||| |||||||||||| || ||||||||    
T  44487820 tgcatataataatgcatgtccctatcaactgagctatactcacggggac 44487868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 1589185 - 1589249
Alignment:
Q  175 tgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||| |  ||||||||||||||||    
T  1589185 tgtccggggttcgaatcctgacccctgcatataacaatgcatgtcaccgccaactgagctatgct 1589249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 49039495 - 49039547
Alignment:
Q  197 ccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||||||||||||| || |||||||||||||||| |||||||||    
T  49039495 ccctgcatataacaatgcatgtccctgccaactgagctatgctcacggggaca 49039547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 12820452 - 12820507
Alignment:
Q  194 gacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  12820452 gacccctgcatataacaatgcattgtctctgccaactgagctatgctcacggggac 12820507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 54265000 - 54264925
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    |||||||| || |||||||| | |||||||| ||||||||||||||||| ||| ||| |||||||||||| |||||    
T  54265000 tgaggtgttcgaggtttgaaccctgacccctacatataacaatgcatgtttctgccagctgagctatgctcacggg 54264925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 27921942 - 27921893
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| |||||    
T  27921942 cccctgcatataataatgcatgtccctaccaactgagctatgctcacggg 27921893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 38657585 - 38657532
Alignment:
Q  197 ccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||||||||||||||| || |||||||||| ||||| ||||||||||    
T  38657585 ccctgcatataacaatgcatgtccctgccaactgagccatgctcacggggacaa 38657532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 41492547 - 41492600
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||| |||||||||| || |||||||||||||||| |||||||||    
T  41492547 cccctgcatataataatgcatgtccctgccaactgagctatgctcacggggaca 41492600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 20166362 - 20166310
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||||||||||||||||| || |||||||||||| ||| ||||||||    
T  20166362 cccctgcatataacaatgcatgtccctgccaactgagctacgctcacggggac 20166310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 9084828 - 9084761
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgct 239  Q
    |||||||| |||| |||||  |||||||||||||||||||||| |||| || ||||||||||||||||    
T  9084828 ggtgtccgaggttcgaatcccgacccctgcatataacaatgcattgtccctgccaactgagctatgct 9084761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 20610785 - 20610742
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  20610785 cccctgcatataacaatgcatgtccctgccaactgagctatgct 20610742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 249
Target Start/End: Complemental strand, 36045902 - 36045823
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||||||||| ||| |||||   ||||||||||||||||||||||||| ||  ||| ||||||||||| || ||||||    
T  36045902 tgaggtgtccggagttcgaatctcaacccctgcatataacaatgcatgtccctgtcaattgagctatgctcactgggaca 36045823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 48512245 - 48512190
Alignment:
Q  196 cccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||||||||||||| ||| || |||||||||||||||| ||||||||||    
T  48512245 cccctgcatataacaatgcattgtccctgccaactgagctatgctcacggggacaa 48512190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 49319462 - 49319387
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||| |  ||||||||||||||| ||||||||||  | |||||||||||||||| ||| ||||    
T  49319462 ggtgtccggggttggaaccccgacccctgcatataataatgcatgtccatgccaactgagctatgctcacgaggac 49319387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 249
Target Start/End: Complemental strand, 49743434 - 49743355
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||||||||||||| |||||  | ||||||||||||| ||||||| || || |||||||| |||||||  ||||||||    
T  49743434 tgaggtgtccggggttcgaatcccggcccctgcatataataatgcatatccctgccaactgaactatgctcgcggggaca 49743355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 249
Target Start/End: Complemental strand, 37729044 - 37728932
Alignment:
Q  140 gtcaggcagcctagtggctagaattcacctt---gaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctat 236  Q
    |||||| || ||||||| |||||||||||||   |  |||||||| ||| ||| |  ||||||||||||||| ||||||| || ||||||||||| ||||    
T  37729044 gtcaggtagtctagtggttagaattcacctttgtggagtgtccggagttcgaacctcgacccctgcatataataatgcatatccctaccaactgaactat 37728945  T
Q  237 gcttacggggaca 249  Q
    ||| || ||||||    
T  37728944 gctcacagggaca 37728932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 4419709 - 4419778
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    |||||||| | ||||||||| |  | |||||||||||||||||||||||||||  |||||||| ||||||    
T  4419709 tgaggtgttctgggtttgaaccccggcccctgcatataacaatgcatgtctctgacaactgagttatgct 4419778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 33076599 - 33076529
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||| ||| |  ||||||||||||||| |||||||||| |  |||||||||||||||| |||||    
T  33076599 ggtgtccggggttcgaaccccgacccctgcatataataatgcatgtccc--ccaactgagctatgctcacggg 33076529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 36008321 - 36008268
Alignment:
Q  196 cccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||||||||||| ||| || |||||||||||||||| ||||||||    
T  36008321 cccctgcatataacaatgcattgtccctgccaactgagctatgctcacggggac 36008268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 39293568 - 39293519
Alignment:
Q  195 acccctgcatataacaatgcatgtctctaccaactgagctatgcttacgg 244  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||| ||||    
T  39293568 acccctgcatataattatgcatgtccctaccaactgagctatgctcacgg 39293519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 54854228 - 54854281
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||||||||||  ||||||||| || |||||||||||||||| |||||||||    
T  54854228 cccctgcatataattatgcatgtccctgccaactgagctatgctcacggggaca 54854281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 28520757 - 28520833
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||| |  | ||||||||||||| ||||||| ||| || |||||||||||||||| ||||||||    
T  28520757 ggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 28520833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 42411480 - 42411556
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||| |  |||||||||||||||  |||||| ||| || |||||||||||||||| ||||||||    
T  42411480 ggtgtccggggttcgaaccccgacccctgcatataattatgcattgtccctgccaactgagctatgctcacggggac 42411556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 2565309 - 2565254
Alignment:
Q  194 gacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||||||||||||||| |||| ||  ||||||||||||||| ||||||||    
T  2565309 gacccctgcatataacaatgcattgtccctgtcaactgagctatgctcacggggac 2565254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 5635258 - 5635192
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgct 239  Q
    ||||||||||||||||| |  ||||||||||||||| |||||| |||| ||| |||||||||||||||    
T  5635258 ggtgtccggggtttgaaccccgacccctgcatataataatgcattgtc-ctagcaactgagctatgct 5635192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 249
Target Start/End: Original strand, 12585614 - 12585661
Alignment:
Q  202 catataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||||||||||||||| || ||||||||| |||| |||||||||||    
T  12585614 catataacaatgcatgtccctgccaactgagttatgtttacggggaca 12585661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 18740964 - 18741015
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||||| ||||||| ||||| ||||||||| | ||||||||||    
T  18740964 gacccctgcatataataatgcatatctctgccaactgagttgtgcttacggg 18741015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 42758212 - 42758255
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    ||||||||||||| |||||||||| |||| ||||||||||||||    
T  42758212 cccctgcatataataatgcatgtccctacaaactgagctatgct 42758255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 50657931 - 50657877
Alignment:
Q  191 catgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggg 245  Q
    |||||||||||||||||| |||||| |||| ||||||||||||||||||| |||||    
T  50657931 catgacccctgcatataataatgcattgtc-ctaccaactgagctatgctcacggg 50657877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 55266482 - 55266533
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||||| |||||||   |||||||||||||||||||| |||||    
T  55266482 gacccctgcatataataatgcattgttctaccaactgagctatgctcacggg 55266533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 9693031 - 9692953
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatg-tctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||||| ||| |  | ||||||||||||| |||||||  || || |||||||||||||||| ||||||||||    
T  9693031 ggtgtccggggttcgaaccccggcccctgcatataataatgcattatccctgccaactgagctatgctcacggggacaa 9692953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 14149862 - 14149784
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||||| ||| |  | ||||||||||||| |||||| |||| || |||||||||||||| | ||||||||||    
T  14149862 ggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatggtcacggggacaa 14149784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 15185126 - 15185072
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||||||||||||| || || ||||| || ||||||| ||||||||    
T  15185126 gacccctgcatataacaatgcatatccctgccaaccgaactatgctcacggggac 15185072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 35230321 - 35230387
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    |||||||| |||| ||| |  ||||| |||||||| |||||||| || |||||||||||||||||||    
T  35230321 ggtgtccgaggttcgaaccccgacccatgcatatagcaatgcatatccctaccaactgagctatgct 35230387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 53815742 - 53815688
Alignment:
Q  196 cccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||| ||||||| ||| || |||||||||||||||| |||||||||    
T  53815742 cccctgcatataataatgcattgtccctgccaactgagctatgctcacggggaca 53815688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 55967647 - 55967601
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtc 219  Q
    ||||||||||||| ||||  || ||||||||||||||||||||||||    
T  55967647 ggtgtccggggttcgaattttgtcccctgcatataacaatgcatgtc 55967601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 46734995 - 46735067
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggg 245  Q
    |||||||| |||||||| |  || |||||||||||| |||||| |||| ||||||||||||||||||| |||||    
T  46734995 ggtgtccgaggtttgaaccccgatccctgcatataataatgcagtgtc-ctaccaactgagctatgctcacggg 46735067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 47017972 - 47018044
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||| ||| |  | ||||||||||||| ||||||| ||| ||||||||||||||||||| |||||    
T  47017972 ggtgtccggggttcgaaccccggcccctgcatataataatgcattgtc-ctaccaactgagctatgctcacggg 47018044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 8690283 - 8690207
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||| |  ||||||||||||||| |||||| ||||  | |||||||||||||||| ||| ||||    
T  8690283 ggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccttgccaactgagctatgctcacgaggac 8690207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 12796712 - 12796660
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||||||||||| ||||  || ||||||||| |||||| ||||||||    
T  12796712 cccctgcatataacaatgtatgttcctgccaactgagttatgctcacggggac 12796660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 20753151 - 20753223
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||| ||| |  | ||||| ||||||| ||||||| |  ||||||||||||||||||| |||||    
T  20753151 ggtgtccggggttcgaaccccggcccctacatataataatgcattttcctaccaactgagctatgctcacggg 20753223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 30152171 - 30152119
Alignment:
Q  199 ctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||||||||||||||| ||  || |||||||||||||||| ||||||||||    
T  30152171 ctgcatataacaatgcattgttcctgccaactgagctatgctcacggggacaa 30152119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 31601875 - 31601803
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||| |||||  | ||||||||||||| ||| |||   ||||||||||||||||| || |||||    
T  31601875 ggtgtccggggttcgaatctcggcccctgcatataataatacattgttctaccaactgagctatactcacggg 31601803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 33359886 - 33359810
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||| ||||| ||| |  ||||| |||||||||||||| |||||  |  ||||||||||||||| |||||||||    
T  33359886 ggtgtccagggttcgaacctcgacccttgcatataacaatgaatgtccatgtcaactgagctatgctcacggggaca 33359810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 43049983 - 43050031
Alignment:
Q  197 ccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||||||||||||  ||  ||||||||||||||| |||||    
T  43049983 ccctgcatataacaatgcatgttcctgtcaactgagctatgctcacggg 43050031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 48968236 - 48968312
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||| |  | ||||||||||||| |||||| |||| || |||||||| ||||||| ||||||||    
T  48968236 ggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgaactatgctcacggggac 48968312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 34082 - 34136
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||||||||||||||||||||| || |||||||||||||||| ||||||||||    
T  34082 cccctgcatataacaatgcatgtccctgccaactgagctatgctcacggggacaa 34136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 2945665 - 2945587
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||||| |||||||| |  |||||||||||||||||||||| |||| || |||||||||||||||| ||||||||||    
T  2945665 ggtgtccgaggtttgaaccccgacccctgcatataacaatgcattgtccctgccaactgagctatgctcacggggacaa 2945587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 22730752 - 22730805
Alignment:
Q  197 ccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||||||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  22730752 ccctgcatataacaatgcatgtctctgccaactgagttatgctcacggggacaa 22730805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 34524921 - 34524868
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||||||||||||||||||||| || |||||||||||||||| |||||||||    
T  34524921 cccctgcatataacaatgcatgtccctgccaactgagctatgctcacggggaca 34524868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 8176041 - 8175990
Alignment:
Q  197 ccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  8176041 ccctgcatataacaatgcatgtctctgtcaactgagctatgctcacggggac 8175990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 30833086 - 30833011
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||| |  |||||||||||||||||||||||||| || |||||||| ||||||| | ||||||    
T  30833086 ggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccctgccaactgaactatgctcatggggac 30833011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 5134486 - 5134536
Alignment:
Q  199 ctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  5134486 ctgcatataacaatgcattgtctctgccaactgagctatgcttacggggac 5134536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 8309233 - 8309167
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    ||||||||||||| ||| | || ||| |||||||||||||||||||| || ||||||||||||||||    
T  8309233 ggtgtccggggttcgaaacttggcccatgcatataacaatgcatgtccctgccaactgagctatgct 8309167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 7563602 - 7563674
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||||||| | |||||||||||| ||| |||||| |||| ||||||||||||||||||| |||||    
T  7563602 ggtgtccggggtttgaaccctgacccctgcatgtaataatgcattgtc-ctaccaactgagctatgctcacggg 7563674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 9031811 - 9031760
Alignment:
Q  197 ccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||||||||||||| || |||||||||||||| | ||||||||    
T  9031811 ccctgcatataacaatgcatgtccctgccaactgagctatgttcacggggac 9031760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 10455811 - 10455736
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||| |  | |||||||||||||||||||||||  || |||||||| ||||||| ||||||||    
T  10455811 ggtgtccggggttcgaaccccggcccctgcatataacaatgcatgttcctgccaactgaactatgctcacggggac 10455736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 245
Target Start/End: Original strand, 6025414 - 6025484
Alignment:
Q  175 tgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||| |||||  ||||||||||||||| |||||||    |||||||||||| ||||||||||||    
T  6025414 tgtccggggttcgaatcccgacccctgcatataataatgcattatcctaccaactgagttatgcttacggg 6025484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 20858431 - 20858477
Alignment:
Q  195 acccctgcatataacaatgcatgtctctaccaactgagctatgctta 241  Q
    ||||||||||||||||||||||||| || ||||||||| ||||||||    
T  20858431 acccctgcatataacaatgcatgtccctgccaactgagttatgctta 20858477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 22389776 - 22389848
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggg 245  Q
    |||||||||| || ||| | |||||||||||||||| |||||| |||| ||||||||||||||||||| |||||    
T  22389776 ggtgtccgggattcgaaccctgacccctgcatataataatgcattgtc-ctaccaactgagctatgctcacggg 22389848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 24256962 - 24256913
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||| ||||||||||||||||||||||  |||||| |||||    
T  24256962 cccctgcatataataatgcatgtctctaccaactgacttatgctcacggg 24256913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 24470440 - 24470493
Alignment:
Q  196 cccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggac 248  Q
    |||||| |||||| ||||||| |||||| |||||||||||||||||||||||||    
T  24470440 cccctgtatataataatgcattgtctctgccaactgagctatgcttacggggac 24470493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 25064717 - 25064770
Alignment:
Q  195 acccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||||||| ||||||||||  |||||||||| ||||||| ||||||||    
T  25064717 acccctgcatataataatgcatgtccataccaactgaactatgctcacggggac 25064770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 9443489 - 9443565
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||| | |||| |||||  ||||| | ||||||||||||||||||  || ||||||||||||||| |||||||||    
T  9443489 ggtgtctgaggttcgaatcccgacccatacatataacaatgcatgtccgtatcaactgagctatgctcacggggaca 9443565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 17176194 - 17176142
Alignment:
Q  197 ccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||||||||||||| ||  ||||||||||||| ||||| |||||    
T  17176194 ccctgcatataacaatgcatgtccctgtcaactgagctatgtttacgaggaca 17176142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 17305562 - 17305510
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| |||||||||| |||||||||||| |||| | ||||||||    
T  17305562 cccctgcatataataatgcatgtccctaccaactgagttatgttcacggggac 17305510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 26669708 - 26669760
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||| |||||||  ||||||||| ||||||||||||||||||| ||||||||    
T  26669708 cccctacatataattatgcatgtccctaccaactgagctatgctcacggggac 26669760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 4844191 - 4844136
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||||||||||||||||||||||| || ||||||||| ||| || | |||||||    
T  4844191 gacccctgcatataacaatgcatgtccctgccaactgagttatactcatggggaca 4844136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 245
Target Start/End: Original strand, 14258286 - 14258357
Alignment:
Q  174 gtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    |||||| ||||| ||| | ||| ||||||||||| ||||||||||  |||||||| |||||||||| |||||    
T  14258286 gtgtccagggttcgaaccctgatccctgcatatagcaatgcatgttcctaccaacggagctatgctcacggg 14258357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 30668230 - 30668281
Alignment:
Q  193 tgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacgg 244  Q
    |||||||||||||||| ||||||||||| | ||||||||| |||||| ||||    
T  30668230 tgacccctgcatataataatgcatgtctatgccaactgagttatgctcacgg 30668281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 3448421 - 3448343
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||||| ||| |  | ||||||| |||||||||||| |||| || |||| ||||||||||| ||||||||||    
T  3448421 ggtgtccggggttcgaaccccggcccctgcgtataacaatgcattgtccctgccaattgagctatgctcacggggacaa 3448343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 9064912 - 9064858
Alignment:
Q  196 cccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||| ||||||| ||| || |||||||||||||||| |||||||||    
T  9064912 cccctgcatataataatgcattgtccctgccaactgagctatgctcacggggaca 9064858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 245
Target Start/End: Complemental strand, 10373691 - 10373592
Alignment:
Q  140 gtcaggcagcctagtggctagaattcaccttgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    |||||| |||||||||||||||||||       ||||||||||||| ||| |  ||||||||||||||| |||||||   |||||||||| || ||||||    
T  10373691 gtcaggtagcctagtggctagaattcg------ggtgtccggggttcgaaccccgacccctgcatataataatgcattgttctaccaactaagttatgct 10373598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 12127936 - 12128001
Alignment:
Q  174 gtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgct 239  Q
    |||||||||||| ||||   ||||||||||||||| |||||| |||| |||||||||||||||||||    
T  12127936 gtgtccggggttcgaattccgacccctgcatataataatgcattgtc-ctaccaactgagctatgct 12128001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 1488136 - 1488091
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    |||| |||||||||||||||||||||||| |||| |||| ||||||    
T  1488136 gacctctgcatataacaatgcatgtctctgccaattgagatatgct 1488091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 11982810 - 11982765
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    ||||||||||||||| |||||||   ||||||||||||||||||||    
T  11982810 gacccctgcatataataatgcattattctaccaactgagctatgct 11982765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 14981751 - 14981804
Alignment:
Q  196 cccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||||||| ||| || |||||||||||||||| ||||||||    
T  14981751 cccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 14981804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 30905528 - 30905475
Alignment:
Q  197 ccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||| |||||||||||||||||  |||||||||||| |||| ||||||| ||||    
T  30905528 ccctacatataacaatgcatgttcctaccaactgagttatggttacgggaacaa 30905475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 34571426 - 34571381
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    ||||||||||||||| ||||||| ||| | ||||||||||||||||    
T  34571426 gacccctgcatataataatgcatatcttttccaactgagctatgct 34571381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 35190811 - 35190766
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    ||||||||||||||| |||||||   ||||||||||||||||||||    
T  35190811 gacccctgcatataataatgcattgttctaccaactgagctatgct 35190766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 6144033 - 6143958
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||| |  ||||||| ||||||| ||||||| ||| || |||||||||||||||| ||||||||    
T  6144033 ggtgtccggggttcgaaccc-gacccctacatataataatgcattgtccctgccaactgagctatgctcacggggac 6143958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 6219422 - 6219347
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||| |||||| |||||  |||| ||| |||||| |||||||||| || |||||||||||||| | |||||||||    
T  6219422 ggtgtctggggttcgaatcc-gaccactgtatataataatgcatgtccctgccaactgagctatgttcacggggaca 6219347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 18631534 - 18631475
Alignment:
Q  180 ggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgct 239  Q
    |||||| |||||  |||||||||||||||||||| | |||| |||||||||||||||||||    
T  18631534 ggggttcgaatcccgacccctgcatataacaatgtattgtc-ctaccaactgagctatgct 18631475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 18904337 - 18904259
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca--tgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||||| ||| |  ||||||||||||||| ||||||  |||| ||||||||||||| | ||| ||||||||||    
T  18904337 ggtgtccggggttcgaaccccgacccctgcatataa-aatgcatttgtccctaccaactgagcaaagctcacggggacaa 18904259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 28979098 - 28979021
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacgggga 247  Q
    |||||||||||||||| ||||   ||||||| |||||||||||||||||| ||| ||||||| ||||||| |||||||    
T  28979098 tgaggtgtccggggttcgaattccgacccctacatataacaatgcatgtccctatcaactgaactatgctcacgggga 28979021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 29937256 - 29937203
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| |||||||||    
T  29937256 cccctgcatataacaatacatgtccctaccaactgagctatgctcacggggaca 29937203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 39432376 - 39432432
Alignment:
Q  195 acccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaag 251  Q
    |||||||||||||||| |||||||| || |||||||||||||||| |||||||||||    
T  39432376 acccctgcatataacattgcatgtccctgccaactgagctatgctcacggggacaag 39432432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 26657901 - 26657859
Alignment:
Q  197 ccctgcatataacaatgcatgtctctaccaactgagctatgct 239  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  26657901 ccctgcatataacaatgcatgtccctaccaactgagctatgct 26657859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 220388 - 220465
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||||||| || ||| | ||||| |||||||||||| |||||||| || |||||||||||||||| ||||| ||||    
T  220388 ggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccctgccaactgagctatgctcacgggaacaa 220465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 689543 - 689620
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||||||| || ||| | ||||| |||||||||||| |||||||| || |||||||||||||||| ||||| ||||    
T  689543 ggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccctgccaactgagctatgctcacgggaacaa 689620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 734011 - 734088
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||||||| || ||| | ||||| |||||||||||| |||||||| || |||||||||||||||| ||||| ||||    
T  734011 ggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccctgccaactgagctatgctcacgggaacaa 734088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 857907 - 857984
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||||||| || ||| | ||||| |||||||||||| |||||||| || |||||||||||||||| ||||| ||||    
T  857907 ggtgtccgggattcgaaccctgacctctgcatataacattgcatgtccctgccaactgagctatgctcacgggaacaa 857984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 250
Target Start/End: Original strand, 216170 - 216250
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||| | || ||| | ||||| ||||||||||||||| ||||| || |||||||||||||||| ||||| ||||    
T  216170 tgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgggaacaa 216250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 250
Target Start/End: Original strand, 692730 - 692810
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||| | || ||| | ||||| ||||||||||||||| ||||| || |||||||||||||||| ||||| ||||    
T  692730 tgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgggaacaa 692810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 250
Target Start/End: Original strand, 696939 - 697019
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||| | || ||| | ||||| ||||||||||||||| ||||| || |||||||||||||||| ||||| ||||    
T  696939 tgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgggaacaa 697019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 250
Target Start/End: Original strand, 729793 - 729873
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||| | || ||| | ||||| ||||||||||||||| ||||| || |||||||||||||||| ||||| ||||    
T  729793 tgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgggaacaa 729873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 250
Target Start/End: Original strand, 853688 - 853768
Alignment:
Q  170 tgaggtgtccggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    ||||||||||| | || ||| | ||||| ||||||||||||||| ||||| || |||||||||||||||| ||||| ||||    
T  853688 tgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatgtccctgccaactgagctatgctcacgggaacaa 853768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 14012658 - 14012601
Alignment:
Q  196 cccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggacaaga 252  Q
    ||||||||||||||||||||| ||| || |||||||| ||||||| ||||||||||||    
T  14012658 cccctgcatataacaatgcattgtccctgccaactgaactatgctcacggggacaaga 14012601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 244
Target Start/End: Complemental strand, 36593233 - 36593192
Alignment:
Q  203 atataacaatgcatgtctctaccaactgagctatgcttacgg 244  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  36593233 atataacaatgcatgtccctaccaactgagctatacttacgg 36593192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 2800088 - 2800012
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||| |  | ||||||||||||| ||||||| ||| || |||||||||||||||| ||||||||    
T  2800088 ggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 2800012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 14011087 - 14011139
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||||||||||||||||| || |||||||| ||||||| || |||||    
T  14011087 cccctgcatataacaatgcatgtccctgccaactgaactatgctcacagggac 14011139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 18577175 - 18577107
Alignment:
Q  180 ggggtttgaatcatgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||| |  ||||||||||||||||||| |||||| ||  |||||||| |||||| ||||||||    
T  18577175 ggggtttgaaccccgacccctgcatataacaatacatgtccctgtcaactgagttatgctcacggggac 18577107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 24572906 - 24572954
Alignment:
Q  202 catataacaatgcatgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||||| || ||||||||| |||||||||||||||| ||||||||||    
T  24572906 catataacgatacatgtctctgccaactgagctatgctcacggggacaa 24572954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 37154583 - 37154507
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||| ||||| ||||   |||||||||||||||| ||||| ||||||| |||||| ||||||||| ||||||||    
T  37154583 ggtgtccagggttcgaattccgacccctgcatataacgatgcattgtctctgccaactaagctatgctcacggggac 37154507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 7345476 - 7345425
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||||| |||||||||| || ||||||||| |||||| |||||    
T  7345476 gacccctgcatataataatgcatgtccctgccaactgagttatgctcacggg 7345425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 32940361 - 32940416
Alignment:
Q  194 gacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    |||||||| ||||||||||||||||| ||  |||||||||||| || |||||||||    
T  32940361 gacccctgtatataacaatgcatgtccctgtcaactgagctatactcacggggaca 32940416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 41793024 - 41793073
Alignment:
Q  198 cctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||||||||||||||| || |||| ||||||||||| ||||||||    
T  41793024 cctgcatataacaatgcatgtc-ctgccaattgagctatgctcacggggac 41793073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 2696602 - 2696525
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||| ||| |  | ||||||||||||| |||||| |||| || ||||||||| |||||| |||||||||    
T  2696602 ggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagttatgctcacggggaca 2696525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 4955032 - 4955081
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||||||| ||||||||| |||| |||| |||||| |||||    
T  4955032 cccctgcatataacaatacatgtctctgccaattgagttatgctcacggg 4955081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 10292398 - 10292345
Alignment:
Q  196 cccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||||||| ||| || |||||||||||||||| ||||||||    
T  10292398 cccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 10292345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 15042391 - 15042463
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggg 245  Q
    ||||||||||||| ||| |  | ||||||||||||| ||||||| ||| ||||||||||||||||||| |||||    
T  15042391 ggtgtccggggttcgaaccccggcccctgcatataataatgcattgtc-ctaccaactgagctatgctcacggg 15042463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 43468731 - 43468803
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggg 245  Q
    ||||||||| ||| ||| |  ||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||    
T  43468731 ggtgtccggagttcgaaccccgacccctacatataacaatgcattgtc-ctaccaactgagctatgctcacggg 43468803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 44070268 - 44070325
Alignment:
Q  194 gacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggacaa 250  Q
    |||||||| ||||||||||||| ||||| | |||||||| ||||||||| ||||||||    
T  44070268 gacccctgtatataacaatgcattgtctttgccaactgaactatgcttatggggacaa 44070325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 33982259 - 33982183
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatg-catgtctctaccaactgagctatgcttacggggac 248  Q
    |||||| |||||| ||| |  ||||||||||||||||||||  |||| |||  ||||||||||||||| ||||||||    
T  33982259 ggtgtctggggttcgaaccccgacccctgcatataacaatgtaatgtttctgtcaactgagctatgctcacggggac 33982183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 230
Target Start/End: Complemental strand, 35779799 - 35779767
Alignment:
Q  198 cctgcatataacaatgcatgtctctaccaactg 230  Q
    |||||||||||||||||||||||||| ||||||    
T  35779799 cctgcatataacaatgcatgtctctatcaactg 35779767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 4569 - 4513
Alignment:
Q  193 tgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||||||||||||||||| || |||||||||||||||| |||| ||||    
T  4569 tgacccctgcatataacaatgcatgtccctgccaactgagctatgctcacggagaca 4513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 4589 - 4533
Alignment:
Q  193 tgacccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggaca 249  Q
    ||||||||||||||||||||||||||| || |||||||||||||||| |||| ||||    
T  4589 tgacccctgcatataacaatgcatgtccctgccaactgagctatgctcacggagaca 4533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 25010 - 25062
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||| ||||||||    
T  25010 cccctgcatataacattgcatgtctctgccaactgagatatgctcacggggac 25062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 37377 - 37426
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggg 245  Q
    |||||| ||| ||||||||||||| ||||||||||||||||||| |||||    
T  37377 cccctgtataaaacaatgcatgtccctaccaactgagctatgctcacggg 37426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 17980 - 18033
Alignment:
Q  196 cccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||| ||||||||    
T  17980 cccctgcatataacaatgcattgtccctaccaattgagctatgctcacggggac 18033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 7145 - 7069
Alignment:
Q  173 ggtgtccggggtttgaatcatgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||| |  | ||||||||||||| ||||||| ||| ||| ||||||||||||||| ||||||||    
T  7145 ggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctaacaactgagctatgctcacggggac 7069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 1085 - 1033
Alignment:
Q  196 cccctgcatataacaatgcatgtctctaccaactgagctatgcttacggggac 248  Q
    ||||| |||||||  ||||||||| ||||||||||||||||||| ||||||||    
T  1085 cccctacatataattatgcatgtccctaccaactgagctatgctcacggggac 1033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0939 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0939
Description:

Target: scaffold0939; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 1977 - 2032
Alignment:
Q  193 tgacccctgcatataacaatgcat-gtctctaccaactgagctatgcttacgggga 247  Q
    |||||| ||||||| ||||| ||| ||| |||||||||||||||||||||||||||    
T  1977 tgacccatgcatattacaatacattgtcactaccaactgagctatgcttacgggga 2032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 4854 - 4907
Alignment:
Q  196 cccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||||||| ||| || |||||||||||||||| ||||||||    
T  4854 cccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 4907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 25072 - 25019
Alignment:
Q  196 cccctgcatataacaatgcat-gtctctaccaactgagctatgcttacggggac 248  Q
    ||||||||||||| ||||||| ||| || |||||||||||||||| ||||||||    
T  25072 cccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 25019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 41798 - 41858
Alignment:
Q  179 cggggtttgaatcatgacccctgcatataacaatgca-tgtctctaccaactgagctatgct 239  Q
    ||||||| |||||  ||||||||||||||||||| || |||| |||||||||||||||||||    
T  41798 cggggttcgaatcccgacccctgcatataacaatccattgtc-ctaccaactgagctatgct 41858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 12614 - 12558
Alignment:
Q  193 tgacccctgcatataacaatgca-tgtctctaccaactgagctatgcttacggggac 248  Q
    |||||||||||||||| |||||| |||| || |||||||||||||||| || |||||    
T  12614 tgacccctgcatataataatgcattgtccctgccaactgagctatgctcacagggac 12558  T

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