View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18503_low_41 (Length: 213)

Name: NF18503_low_41
Description: NF18503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18503_low_41
NF18503_low_41
[»] chr2 (23 HSPs)
chr2 (18-195)||(32127144-32127321)
chr2 (18-195)||(42439973-42440150)
chr2 (18-195)||(35962702-35962879)
chr2 (15-179)||(41251634-41251798)
chr2 (18-195)||(16405587-16405764)
chr2 (15-195)||(31581622-31581802)
chr2 (15-181)||(6403804-6403970)
chr2 (15-195)||(17445041-17445219)
chr2 (15-182)||(44084603-44084770)
chr2 (18-195)||(18981604-18981780)
chr2 (15-182)||(45418583-45418750)
chr2 (45-195)||(2958131-2958280)
chr2 (16-176)||(771005-771165)
chr2 (16-182)||(8147351-8147518)
chr2 (15-85)||(12756837-12756907)
chr2 (18-85)||(2285959-2286026)
chr2 (107-173)||(7072644-7072710)
chr2 (18-180)||(8059336-8059498)
chr2 (107-158)||(34905973-34906024)
chr2 (15-45)||(26238080-26238110)
chr2 (102-158)||(4555298-4555354)
chr2 (15-89)||(26162702-26162773)
chr2 (134-182)||(26237957-26238004)
[»] chr4 (36 HSPs)
chr4 (15-195)||(25930695-25930875)
chr4 (15-195)||(36382346-36382525)
chr4 (15-182)||(30216742-30216909)
chr4 (15-181)||(20129311-20129477)
chr4 (18-195)||(29319708-29319885)
chr4 (18-195)||(40529000-40529179)
chr4 (15-181)||(47500774-47500940)
chr4 (15-180)||(43143584-43143749)
chr4 (15-181)||(13012189-13012355)
chr4 (15-179)||(3292896-3293060)
chr4 (15-181)||(26439279-26439445)
chr4 (15-181)||(34407284-34407450)
chr4 (15-195)||(17511233-17511413)
chr4 (17-182)||(50205079-50205244)
chr4 (15-182)||(6690235-6690402)
chr4 (15-89)||(6235613-6235687)
chr4 (15-181)||(43355905-43356071)
chr4 (15-180)||(48989330-48989495)
chr4 (27-181)||(42333788-42333942)
chr4 (15-182)||(10352884-10353051)
chr4 (15-89)||(44156744-44156818)
chr4 (15-176)||(29995983-29996144)
chr4 (15-89)||(28877250-28877324)
chr4 (15-89)||(35546046-35546120)
chr4 (15-181)||(30077631-30077797)
chr4 (102-180)||(45194178-45194256)
chr4 (15-89)||(1817810-1817884)
chr4 (27-89)||(13392893-13392955)
chr4 (27-89)||(13396032-13396094)
chr4 (15-182)||(26448053-26448219)
chr4 (134-180)||(30109958-30110004)
chr4 (15-49)||(30110108-30110142)
chr4 (15-49)||(48130111-48130145)
chr4 (102-170)||(48129978-48130046)
chr4 (141-182)||(7769328-7769369)
chr4 (145-182)||(49908782-49908819)
[»] chr7 (18 HSPs)
chr7 (18-195)||(5555474-5555651)
chr7 (15-195)||(8394112-8394292)
chr7 (15-195)||(36630803-36630983)
chr7 (18-195)||(3114099-3114276)
chr7 (17-195)||(14777109-14777287)
chr7 (15-182)||(34389056-34389223)
chr7 (15-182)||(37002144-37002311)
chr7 (15-173)||(35090177-35090335)
chr7 (15-182)||(33685564-33685731)
chr7 (17-182)||(8867733-8867898)
chr7 (15-163)||(40920003-40920151)
chr7 (15-89)||(26624839-26624913)
chr7 (15-89)||(36658274-36658348)
chr7 (16-89)||(38638237-38638310)
chr7 (15-175)||(43184468-43184628)
chr7 (15-89)||(7002818-7002892)
chr7 (15-89)||(7048689-7048763)
chr7 (15-49)||(10868456-10868490)
[»] chr5 (19 HSPs)
chr5 (18-195)||(10033914-10034091)
chr5 (15-195)||(13817964-13818144)
chr5 (18-185)||(39657509-39657676)
chr5 (16-195)||(1776377-1776556)
chr5 (15-195)||(36293621-36293801)
chr5 (15-195)||(39434683-39434863)
chr5 (31-195)||(3155647-3155811)
chr5 (15-181)||(26283318-26283484)
chr5 (15-182)||(12278860-12279027)
chr5 (15-182)||(17332551-17332718)
chr5 (15-182)||(31680367-31680534)
chr5 (15-164)||(16155015-16155164)
chr5 (18-150)||(16333879-16334011)
chr5 (15-182)||(37254641-37254808)
chr5 (15-168)||(33430335-33430488)
chr5 (15-182)||(31501716-31501883)
chr5 (15-180)||(36291373-36291538)
chr5 (15-187)||(19985934-19986106)
chr5 (15-163)||(43068896-43069044)
[»] chr6 (9 HSPs)
chr6 (18-195)||(34948761-34948938)
chr6 (18-195)||(13837808-13837985)
chr6 (15-181)||(398618-398784)
chr6 (15-182)||(18339106-18339273)
chr6 (15-182)||(28996730-28996897)
chr6 (15-176)||(29743289-29743450)
chr6 (102-182)||(31028451-31028531)
chr6 (15-89)||(33229336-33229410)
chr6 (146-182)||(13647017-13647053)
[»] chr8 (13 HSPs)
chr8 (15-195)||(29728386-29728566)
chr8 (18-195)||(15838273-15838449)
chr8 (15-195)||(3648794-3648974)
chr8 (15-178)||(16788025-16788188)
chr8 (15-181)||(39914516-39914681)
chr8 (15-183)||(34136825-34136993)
chr8 (15-182)||(4404008-4404175)
chr8 (15-182)||(23402108-23402275)
chr8 (15-182)||(36408551-36408718)
chr8 (15-89)||(42231030-42231104)
chr8 (28-89)||(9877313-9877374)
chr8 (107-182)||(2729288-2729363)
chr8 (15-49)||(40470475-40470509)
[»] chr3 (19 HSPs)
chr3 (15-195)||(34084122-34084302)
chr3 (15-195)||(22968444-22968624)
chr3 (16-195)||(6269427-6269606)
chr3 (15-196)||(19390132-19390313)
chr3 (15-182)||(45182981-45183148)
chr3 (15-183)||(27935177-27935345)
chr3 (15-195)||(40081741-40081918)
chr3 (15-182)||(11018212-11018379)
chr3 (15-181)||(39771791-39771957)
chr3 (15-182)||(6930894-6931061)
chr3 (15-182)||(33040953-33041120)
chr3 (15-182)||(45335875-45336041)
chr3 (15-182)||(6503569-6503736)
chr3 (15-89)||(35514355-35514429)
chr3 (15-63)||(22922214-22922262)
chr3 (31-182)||(19565517-19565668)
chr3 (130-187)||(22922152-22922209)
chr3 (15-49)||(5135421-5135455)
chr3 (134-182)||(5354709-5354757)
[»] chr1 (12 HSPs)
chr1 (18-195)||(7433432-7433609)
chr1 (15-195)||(42310941-42311121)
chr1 (15-181)||(26144256-26144422)
chr1 (15-195)||(32982056-32982236)
chr1 (15-178)||(3828988-3829150)
chr1 (16-182)||(17445313-17445479)
chr1 (15-182)||(35907552-35907719)
chr1 (15-89)||(321377-321451)
chr1 (15-49)||(33489839-33489873)
chr1 (15-49)||(41972256-41972290)
chr1 (134-181)||(41972394-41972440)
chr1 (102-195)||(23313225-23313319)
[»] scaffold0002 (1 HSPs)
scaffold0002 (15-181)||(480457-480623)
[»] scaffold0069 (1 HSPs)
scaffold0069 (15-195)||(17829-18009)
[»] scaffold0502 (1 HSPs)
scaffold0502 (15-182)||(5230-5397)
[»] scaffold2142 (1 HSPs)
scaffold2142 (15-181)||(523-689)
[»] scaffold0041 (1 HSPs)
scaffold0041 (15-163)||(52944-53092)
[»] scaffold0154 (1 HSPs)
scaffold0154 (15-182)||(31480-31647)


Alignment Details
Target: chr2 (Bit Score: 126; Significance: 4e-65; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 32127144 - 32127321
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||            ||||||||||||||||    
T  32127144 atgaacccgtcaatagtgtgctaaataaaattccaagatctatttgcgtgtgacaattttcagattgcctaaatttttctttttgtaaatgtgttaatga 32127243  T
Q  118 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32127244 gcttttgggtcgagtttaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgccatacgctagaacc 32127321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 42440150 - 42439973
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 117  Q
    ||||| |||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||            |||||||||||||||     
T  42440150 atgaatccgtcaatagtgtgctaaataaaattgcaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 42440051  T
Q  118 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    ||||||||||  ||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||    
T  42440050 gcttttgggtttagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaacc 42439973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 35962879 - 35962702
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||            |||||||||||||| |    
T  35962879 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaaattttctttttgtaaatgtgttaataa 35962780  T
Q  118 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    ||||||||||  ||| ||||||||||||||||| ||||||| |||| |||||||| |||||||||||||| |||||||    
T  35962779 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcctggggtcgccatacggtagaacc 35962702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 41251634 - 41251798
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||            |||||||||||||    
T  41251634 gagatgaaactgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 41251733  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtc 179  Q
    || ||||||||||  ||| ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  41251734 tgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtc 41251798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 16405764 - 16405587
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||             |||||||||||||||    
T  16405764 atgaacccgtcaatagtgtgctaaataaaattccaagacttatttgcgtgtgacaattttcagattgtccaaatttttctttttataaatgtgttaatga 16405665  T
Q  118 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    ||||||||||  ||| ||| ||||||||||||| ||| ||| |||||||||||||| ||||| ||||| | |||||||    
T  16405664 gcttttgggttgagtctaacgtgcaaaaattatcgattgagcccgggcgaccgcccagggtcaccatatggtagaacc 16405587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 31581622 - 31581802
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||            |||||||||||||    
T  31581622 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 31581721  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    || |||||||||   ||| |||| |||||||| ||| | ||||| | ||||||||||||| |||||||||||  |||||||    
T  31581722 tgggcttttgggatgagtctaatatgcaaaaagtatcgctcgagcctgggcgaccgcccgtggtcgccatacagtagaacc 31581802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 6403804 - 6403970
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||||||||             ||||||||||||    
T  6403804 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaa 6403903  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 181  Q
    ||| ||||| |||  ||| ||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  6403904 tgaactttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 6403970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 17445041 - 17445219
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||            |||||||||||||    
T  17445041 gagatgaaactgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 17445140  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    || ||||||||||  ||| ||  ||||||||||||| |||||||  |||||||||||||| |||||||| ||| |||||||    
T  17445141 tgggcttttgggttgagtcta--gtgcaaaaattatcgatcgagctcgggcgaccgcccgaggtcgccacacggtagaacc 17445219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 44084603 - 44084770
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||  |||  ||||||||| ||| ||||||||||||||||||            |||| ||||||||    
T  44084603 gagatgaacccgtcaatagtgtgctaaataaaattctgagacctatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 44084702  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    ||| ||||||| |   |||||||||||||||||||| ||||||| ||||||||| |||||||||||||    
T  44084703 tgaacttttggattgggtttaatgtgcaaaaattatcgatcgagcccgggcgactgcccggggtcgcc 44084770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 18981780 - 18981604
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 117  Q
    ||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||| | |||||||||            |||||||| ||||||     
T  18981780 atgaacccgtcaacagtgtgctaaataaaattccaagacctatttgcgtgtgacaatttttaaattgcccaaatttttctttttgtaaatgttttaatgg 18981681  T
Q  118 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
     |||||||||  ||| |||||||||||||||||  |||||| |||| ||||||||| ||||||||||||| |||||||    
T  18981680 acttttgggttgagtctaatgtgcaaaaattatcaatcgagcccggacgaccgccc-gggtcgccatacggtagaacc 18981604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 45418750 - 45418583
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  45418750 gagatgaacccgtcaatagtgtgctaaataaaattcagagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 45418651  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |  ||||||||||    | ||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  45418650 ttggcttttgggttggatctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 45418583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 45 - 195
Target Start/End: Original strand, 2958131 - 2958280
Alignment:
Q  45 aaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatgagcttttgggtcaagtttaatgtgcaaa 144  Q
    |||||||||||  |||||||||||||||||||||||||| |||||            ||||||||||||||| ||||||||||  ||| |||||||||||    
T  2958131 aaattccaagacctatttgcgtgtgacaattttcagattacccaaatttttctctttgtaaatgtgttaatgggcttttgggttgagtctaatgtgcaaa 2958230  T
Q  145 aattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    | |||| ||||||| |||| ||||||||||||||||||||||| |||||||    
T  2958231 a-ttatcgatcgagcccggacgaccgcccggggtcgccatacggtagaacc 2958280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 176
Target Start/End: Complemental strand, 771165 - 771005
Alignment:
Q  16 agatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaat 115  Q
    ||||||||||||||||| ||||||||||||| |||| |||  ||||||||||||| ||||||||||||||||||            |||| |||||||||    
T  771165 agatgaacccgtcaataatgtgctaaataaagttccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaat 771066  T
Q  116 gagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggg 176  Q
    | |||||| |||   || |||||||||||| |||| ||||||| |||||||||||||||||    
T  771065 gggctttttggttgggtctaatgtgcaaaagttatcgatcgagcccgggcgaccgcccggg 771005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 8147518 - 8147351
Alignment:
Q  16 agatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaa-ttttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||||||||||||||||| ||||||||||||| |||| ||||||||||||| || ||||||||||||||||            |||| ||||||||    
T  8147518 agatgaacccgtcaatagtgtgttaaataaaattccgagatctatttgcgtgtgagaatttttcagattgcccaaatttttctttttgtaagtgtgttaa 8147419  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |   |||||| ||   || ||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  8147418 ttgacttttgagttgggtctaatgtgcaaagattatcgatcgagcccgggcgaccgcccggggtcgcc 8147351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 12756837 - 12756907
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgc 85  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||    
T  12756837 gagatgaacccgtcaatagtgtgctaaataaaattccgagacttatttgcgtgtgagaattttcagattgc 12756907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 2286026 - 2285959
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgc 85  Q
    |||||| ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  2286026 atgaacacgtcaatagtgtgctaaataaaattccaaaacctatttgcgtgtgacaattttcagattgc 2285959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 7072644 - 7072710
Alignment:
Q  107 tgtgttaatgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgccc 173  Q
    |||||||||| ||||||||||  ||||||||||  ||||||||| ||||||| ||||||||||||||    
T  7072644 tgtgttaatgggcttttgggttgagtttaatgtaaaaaaattatcgatcgagcccgggcgaccgccc 7072710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 8059336 - 8059498
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 117  Q
    |||||||||||||| ||||||||||||||||||| |||   ||||| |||||| |||||||| |||| ||||            |||| |||||||||      
T  8059336 atgaacccgtcaattgtgtgctaaataaaattccgagaccgatttgtgtgtgagaattttcaaattggccaaatttttctttttgtaagtgtgttaattg 8059435  T
Q  118 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcg 180  Q
    ||||||||||  | | ||||||||||||||||| ||| ||| | |||||| || |||||||||    
T  8059436 gcttttgggttgactctaatgtgcaaaaattatcgattgagcctgggcgatcggccggggtcg 8059498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 158
Target Start/End: Complemental strand, 34906024 - 34905973
Alignment:
Q  107 tgtgttaatgagcttttgggtcaagtttaatgtgcaaaaattattgatcgag 158  Q
    |||||||||| |||||||||| | | |||||||||||||||||| |||||||    
T  34906024 tgtgttaatgggcttttgggttaggcttaatgtgcaaaaattatcgatcgag 34905973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 45
Target Start/End: Complemental strand, 26238110 - 26238080
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataa 45  Q
    |||||||||||||||||||||||||||||||    
T  26238110 gagatgaacccgtcaatagtgtgctaaataa 26238080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 4555298 - 4555354
Alignment:
Q  102 gtaaatgtgttaatgagcttttgggtcaagtttaatgtgcaaaaattattgatcgag 158  Q
    |||| |||||||| ||||||||||||   |||| ||||||||||||||| |||||||    
T  4555298 gtaagtgtgttaacgagcttttgggttgggtttgatgtgcaaaaattatcgatcgag 4555354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 26162702 - 26162773
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 89  Q
    |||||||||||||||||| ||||||||||||   ||| |||  |||||| || ||| |||||| |||||||||||    
T  26162702 gagatgaacccgtcaataatgtgctaaataa---tccgagacctatttgtgtttgagaatttttagattgcccaa 26162773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 26238004 - 26237957
Alignment:
Q  134 taatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |||| ||||||||| || ||||||| |||||||||||||||||||||||    
T  26238004 taatttgcaaaaat-atcgatcgagcccgggcgaccgcccggggtcgcc 26237957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 1e-52; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 25930875 - 25930695
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||            |||||||||||||    
T  25930875 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaa 25930776  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    || ||||||||||  ||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||| |||||||    
T  25930775 tgggcttttgggttgagtttaatgtgcaaaaattatagatcgagcccgggcgaccgcccagggtcgccatacggtagaacc 25930695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 36382346 - 36382525
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||            |||||||||||||    
T  36382346 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgtccaa-atttttcttttgtaaatgtgttaa 36382444  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    ||  ||||| |||  ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||    
T  36382445 tggactttttggttgagtttaatgtgcaaaaattatggatcgagcccgggcgaccgcccggggtcgccatacggtagaacc 36382525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 30216742 - 30216909
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||| ||||||||||||||||||            |||| ||||||||    
T  30216742 gagatgaacccgtcaatagtgtgctaaataaaattccgagatctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 30216841  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    | |||||||||||   || ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  30216842 ttagcttttgggttgggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 30216909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 20129477 - 20129311
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||| ||||  ||||| ||||||||||||||||||||||||||            |||||||||||||    
T  20129477 gagatgaaactgtcaatagtgtgccaaataaaattctaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 20129378  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 181  Q
    || ||||||||||  ||| ||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  20129377 tgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 20129311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 29319708 - 29319885
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||            |||||||||||||||     
T  29319708 atgaacccgtcaatagtgtgctaaataaaattccaagacttatttgtgtgtgacaattttcagattgctcaaatttttctttttgtaaatgtgttaatgg 29319807  T
Q  118 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    | ||||||||  ||| ||||||||||||||||| ||||||| | || |||||||| |||||| ||||||| |||||||    
T  29319808 gattttgggttgagtctaatgtgcaaaaattatcgatcgagcctggacgaccgccaggggtcaccatacggtagaacc 29319885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 40529179 - 40529000
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||| |||| ||||            ||||||||||||||||    
T  40529179 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcatgtgacaattttcaaattgtccaaatttttctttttgtaaatgtgttaatga 40529080  T
Q  118 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgac--cgcccggggtcgccatacgctagaacc 195  Q
    | |||| |||  ||||||||||||||||||||| ||||||| |||| ||||  ||||| ||||||||||||| |||||||    
T  40529079 gtttttaggttgagtttaatgtgcaaaaattatcgatcgagtccggacgacctcgcccagggtcgccatacggtagaacc 40529000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 47500940 - 47500774
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||||||||  ||||| |||||||||||||||| |||||||||             ||||||||||||    
T  47500940 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttcttttcataaatgtgttaa 47500841  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 181  Q
    ||||||||| |||  ||| ||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  47500840 tgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 47500774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 43143584 - 43143749
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  43143584 gagatgaacccatcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 43143683  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcg 180  Q
    |  ||||||||||  ||| ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  43143684 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcg 43143749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 13012355 - 13012189
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||||||||  ||||| |||||||||||||||| |||||||||             ||||||||||||    
T  13012355 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaa 13012256  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 181  Q
    ||||||||| |||  | | ||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  13012255 tgagctttttggttgaatctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 13012189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 3292896 - 3293060
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||| ||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  3292896 gagatgaactcgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 3292995  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtc 179  Q
    |  ||||||||||   || ||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  3292996 ttggcttttgggttgggtctaatgggcaaaaattatcgatcgagcccgggcgaccgcccggggtc 3293060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 26439279 - 26439445
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||  |||||||||| |||||  ||||| ||||||||||||||||||||||||||             ||||||||||||    
T  26439279 gagatgaaactgtcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaa 26439378  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 181  Q
    || ||||||||||  ||| ||||||||||||||||| || |||| ||||||||||||||||||||||    
T  26439379 tgggcttttgggttgagtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgc 26439445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 34407284 - 34407450
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||  |||||||||| |||||  ||||| ||||||||||||||||||||||||||             ||||||||||||    
T  34407284 gagatgaaactgtcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaa 34407383  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 181  Q
    || ||||||||||  ||| ||||||||||||||||| || |||| ||||||||||||||||||||||    
T  34407384 tgggcttttgggttgagtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgc 34407450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 17511233 - 17511413
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaatt-ccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgtta 113  Q
    ||||||||||  |||||| |||||||||||||||| ||||||  ||||||||||| |||||||||| |||||||||            ||||||||||||    
T  17511233 gagatgaaccgatcaataatgtgctaaataaaatttccaagacctatttgcgtgtaacaattttcaaattgcccaaatttttctttttgtaaatgtgtta 17511332  T
Q  114 atgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    ||| ||||||||||  ||| ||||||||||||||||| ||||||| | ||||||||| || ||||||||||||| |||||||    
T  17511333 atgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagtctgggcgaccg-ccagggtcgccatacggtagaacc 17511413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 50205079 - 50205244
Alignment:
Q  17 gatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatg 116  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||| ||||            |||| |||||||||     
T  50205079 gatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgtccaattttttctttttgtaagtgtgttaatt 50205178  T
Q  117 agcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
     ||||||||||    | ||||||||||||||||| |||||||  |||||||||||||||| |||||    
T  50205179 ggcttttgggttggatctaatgtgcaaaaattatcgatcgagctcgggcgaccgcccgggatcgcc 50205244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 6690235 - 6690402
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||| |||||||||||||||||||||||||||||| | |||  ||||||||||||| ||||||||| ||||||||            |||| ||||||||    
T  6690235 gagacgaacccgtcaatagtgtgctaaataaaatttcgagacctatttgcgtgtgagaattttcagtttgcccaaatttttctttttgtaagtgtgttaa 6690334  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |  ||||||||||   || ||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  6690335 ttggcttttgggttgggtctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 6690402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 6235687 - 6235613
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 89  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||    
T  6235687 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaa 6235613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 43356071 - 43355905
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||  |||||||||| |||||  ||||| ||||||||||||||||||||||||||             ||||||||||||    
T  43356071 gagatgaaactgtcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaa 43355972  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 181  Q
    || ||||||||||  ||| ||||||||||||||||| || |||| ||||||||| ||| ||||||||    
T  43355971 tgggcttttgggttgagtctaatgtgcaaaaattatcgaccgagcccgggcgactgcctggggtcgc 43355905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 48989495 - 48989330
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||| ||| ||||||||||||||||||            |||| ||||||||    
T  48989495 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 48989396  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcg 180  Q
    ||  |||||| ||   |||||||||||||||||||| ||||||  ||||  |||||||||| ||||    
T  48989395 tggacttttgagttgggtttaatgtgcaaaaattatcgatcgaacccggttgaccgcccggagtcg 48989330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 181
Target Start/End: Original strand, 42333788 - 42333942
Alignment:
Q  27 tcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatgagcttttggg 126  Q
    ||||| ||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| |||||||||  |||||||||    
T  42333788 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 42333887  T
Q  127 tcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 181  Q
    |  ||| ||||||||||||||||| ||| ||| |||| |||||||||||| ||||    
T  42333888 ttgagtctaatgtgcaaaaattatcgattgagcccggacgaccgcccgggatcgc 42333942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 10352884 - 10353051
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| ||| || | ||||||||||||||||||| |||  ||||||||||| | ||||||||||||||||||            |||||||||||||    
T  10352884 gagatgaatccgacactggtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgcccaaatttttccttttgtaaatgtgttaa 10352983  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    ||  ||||| |||   || ||||||||||||||||| ||| ||| ||||||||||||| |||||||||    
T  10352984 tggactttttggttgggtctaatgtgcaaaaattatcgattgagcccgggcgaccgccaggggtcgcc 10353051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 44156818 - 44156744
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 89  Q
    ||||||||||||||||||||||||||||||||||||| |||  |||||||||| || ||||||||||||| ||||    
T  44156818 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgagagaattttcagattgtccaa 44156744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 29995983 - 29996144
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| |||||||||||||||| ||||||||||| |||  ||||||||||  | ||||||||||||||||||            |||||||||||||    
T  29995983 gagatgaatccgtcaatagtgtgcttaataaaattccgagaactatttgcgtgcaagaattttcagattgcccaaatttttcttttcgtaaatgtgttaa 29996082  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggg 176  Q
    ||  ||||| |||  ||| |||||| |||||||||| ||||||| |||| |||||| |||||    
T  29996083 tggactttttggttgagtctaatgtacaaaaattatcgatcgagtccggacgaccgtccggg 29996144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 28877250 - 28877324
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 89  Q
    ||||||||||| ||||||||||||||||||||||||| |||  ||||||||||||| |||||| ||||| |||||    
T  28877250 gagatgaacccatcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaatttttagatttcccaa 28877324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 35546120 - 35546046
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 89  Q
    ||||||||||| ||||||||||||||||||||||||  |||   |||||||||||| ||||||||||||||||||    
T  35546120 gagatgaacccatcaatagtgtgctaaataaaattcagagacccatttgcgtgtgagaattttcagattgcccaa 35546046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 30077631 - 30077797
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| ||| || ||||||||||||||||||| |||||  |||||| |||| | ||||||||||||| ||||            |||||||||||||    
T  30077631 gagatgaatccggcactagtgtgctaaataaaatttcaagacctatttgtgtgtaaaaattttcagattgtccaaatttttctttttgtaaatgtgttaa 30077730  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 181  Q
    ||| ||||| |||   || |||||||||||| |||| ||| ||| | ||||||||||||| ||||||    
T  30077731 tgaactttttggttgggtctaatgtgcaaaatttatcgattgagcctgggcgaccgcccgaggtcgc 30077797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 45194256 - 45194178
Alignment:
Q  102 gtaaatgtgttaatgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcg 180  Q
    |||| ||||||||||  |||||||||  ||||||||||||||||||||||||||||| |||||| | |||| |||||||    
T  45194256 gtaagtgtgttaatggacttttgggttgagtttaatgtgcaaaaattattgatcgagtccgggcaatcgcctggggtcg 45194178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 1817884 - 1817810
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 89  Q
    |||||||| ||| |||||||||| ||||||||||||| |||  ||||||||||| | |||||| |||||||||||    
T  1817884 gagatgaatccgacaatagtgtgttaaataaaattccgagacctatttgcgtgtaagaatttttagattgcccaa 1817810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 13392893 - 13392955
Alignment:
Q  27 tcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 89  Q
    ||||||||||||||||||||||| | |||  ||||||||||||| |||||| |||||||||||    
T  13392893 tcaatagtgtgctaaataaaatttcgagacctatttgcgtgtgagaatttttagattgcccaa 13392955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 13396032 - 13396094
Alignment:
Q  27 tcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 89  Q
    ||||||||||||||||||||||| | |||  ||||||||||||| |||||| |||||||||||    
T  13396032 tcaatagtgtgctaaataaaatttcgagacctatttgcgtgtgagaatttttagattgcccaa 13396094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 26448219 - 26448053
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||| || ||| |||||||||||||||||||||||| | |  |||||| || ||| ||||||||||||||||||            |||| ||||||||    
T  26448219 gagataaatccgccaatagtgtgctaaataaaattccgaaacctatttgtgtatgagaattttcagattgcccaa-attttttttttgtaagtgtgttaa 26448121  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    ||  ||||||||| |  ||||||||||||||||||| ||||||| |||| ||| ||| ||| ||||||    
T  26448120 tggacttttgggttagatttaatgtgcaaaaattatcgatcgagtccggacgatcgcacggagtcgcc 26448053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 30110004 - 30109958
Alignment:
Q  134 taatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcg 180  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  30110004 taatgtgcaaaaattatcgatcgagtccgggcgaccgtccggggtcg 30109958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 30110142 - 30110108
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaatt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  30110142 gagatgaacccgtcaatagtgtgctaaataaaatt 30110108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 48130145 - 48130111
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaatt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  48130145 gagatgaacccgtcaatagtgtgctaaataaaatt 48130111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 48130046 - 48129978
Alignment:
Q  102 gtaaatgtgttaatgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccg 170  Q
    |||| |||||||||||||||||||||   || |||| |||||||||||| ||||||| |||| ||||||    
T  48130046 gtaagtgtgttaatgagcttttgggttgggtctaatatgcaaaaattatcgatcgagcccggtcgaccg 48129978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 7769369 - 7769328
Alignment:
Q  141 caaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |||||||||| ||||||| ||||||||||||| |||||||||    
T  7769369 caaaaattatcgatcgagcccgggcgaccgcctggggtcgcc 7769328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 49908782 - 49908819
Alignment:
Q  145 aattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  49908782 aattatcgatcgagcccgggcgaccgcccggggtcgcc 49908819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 5555651 - 5555474
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||            ||||||| |||||||     
T  5555651 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgcgttaatgg 5555552  T
Q  118 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    ||||||||||  ||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||    
T  5555551 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaacc 5555474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 8394292 - 8394112
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||| |||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||            |||||||||||||    
T  8394292 gagataaacccgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttccttttgtaaatgtgttaa 8394193  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    ||  ||||| |||  ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||    
T  8394192 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaacc 8394112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 36630983 - 36630803
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||            |||||||||||||    
T  36630983 gagatgaacccgtcaatagtgtgctaactaaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 36630884  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    ||  ||||| |||  ||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||| |||||||    
T  36630883 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccgggcgaccgtccggggtcgccatacggtagaacc 36630803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 3114099 - 3114276
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||            |||||||||||||||     
T  3114099 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 3114198  T
Q  118 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    ||||||||||  ||| ||||||||||||||||| ||||||| ||||||||||| |||||||| ||||||| |||||||    
T  3114199 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgtccggggtcaccatacggtagaacc 3114276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 14777109 - 14777287
Alignment:
Q  17 gatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatg 116  Q
    |||||| | ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||            |||||||||||||||    
T  14777109 gatgaaactgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatg 14777208  T
Q  117 agcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    |||||||||||  ||| ||||||||||||||||| ||||||| ||||||||||||||||| |||| | ||| |||||||    
T  14777209 agcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgctacacggtagaacc 14777287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 34389056 - 34389223
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||||||||| ||| |||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  34389056 gagatgaacccgtcgataatgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 34389155  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    | |||||||||||   || ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  34389156 ttagcttttgggttgggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 34389223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 37002144 - 37002311
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  37002144 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 37002243  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |   ||||||| |   || ||||||||||||||||| |||||||||||  ||||||||||||||||||    
T  37002244 ttgacttttggattgggtctaatgtgcaaaaattatcgatcgagaccgaacgaccgcccggggtcgcc 37002311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 15 - 173
Target Start/End: Complemental strand, 35090335 - 35090177
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| |||||||||||||||||||||||||||| |||  ||||||||||||| |||||||||||| |||||            |||| ||||||||    
T  35090335 gagatgaatccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattacccaaatttttctttttgtaagtgtgttaa 35090236  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgccc 173  Q
    |  ||||||||||   || ||||||||||||||||||||||||| ||||||||||||||    
T  35090235 ttggcttttgggttgggtctaatgtgcaaaaattattgatcgagcccgggcgaccgccc 35090177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 33685731 - 33685564
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||| |||||||||||||||||||||||||||||   ||| |||||||||| ||| ||||||||||||||||||            |||| ||||||||    
T  33685731 gagataaacccgtcaatagtgtgctaaataaaattatgagacatatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 33685632  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    || ||||||||||   |||||||||||||||||||| ||||||| ||| ||||| ||| |||||||||    
T  33685631 tgggcttttgggttgggtttaatgtgcaaaaattatcgatcgagcccgagcgactgcctggggtcgcc 33685564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 8867733 - 8867898
Alignment:
Q  17 gatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatg 116  Q
    |||||| |||||||||||||||||||||||||||| |||  ||||||||||||| ||||||| ||||||||||            |||||||| |||||     
T  8867733 gatgaatccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttccgattgcccaaatttttctttttgtaaatgtattaatt 8867832  T
Q  117 agcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
     |||||||| |   || |||| |||||||||||| ||||||| |||||||||||||||||||||||    
T  8867833 ggcttttggattgggtctaatatgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 8867898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 40920003 - 40920151
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||| ||||||||||||| ||||            |||||||||||||    
T  40920003 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgtccaaatttttctttttgtaaatgtgttaa 40920102  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgg 163  Q
    |  |||||||||| || | ||||||||||||||||| ||||||| ||||    
T  40920103 ttggcttttgggttaaatctaatgtgcaaaaattatcgatcgagcccgg 40920151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 26624913 - 26624839
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 89  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||    
T  26624913 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaa 26624839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 36658348 - 36658274
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 89  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||    
T  36658348 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaa 36658274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 38638237 - 38638310
Alignment:
Q  16 agatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 89  Q
    |||||||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||    
T  38638237 agatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaa 38638310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 43184468 - 43184628
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||            |||| | ||||||    
T  43184468 gagatgaacccgtcaatagtgtgctaaataaaattcagagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtatgttaa 43184567  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccgg 175  Q
    |  |||||||||| |||| | ||| | ||||||||| ||||||| ||| ||||||||||||    
T  43184568 ttggcttttgggttaagtctgatgcgtaaaaattatcgatcgagcccgagcgaccgcccgg 43184628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 7002892 - 7002818
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 89  Q
    |||||||||||||||||||||||||||||||||||||  ||  ||||||||||||| |||||| |||||| ||||    
T  7002892 gagatgaacccgtcaatagtgtgctaaataaaattccgtgacctatttgcgtgtgagaatttttagattgtccaa 7002818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 7048763 - 7048689
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 89  Q
    |||||||||||||||||||||||||||||||||||||  ||  ||||||||||||| |||||| |||||| ||||    
T  7048763 gagatgaacccgtcaatagtgtgctaaataaaattccgtgacctatttgcgtgtgagaatttttagattgtccaa 7048689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 10868456 - 10868490
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaatt 49  Q
    |||||||||||||||| ||||||||||||||||||    
T  10868456 gagatgaacccgtcaaaagtgtgctaaataaaatt 10868490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 10034091 - 10033914
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||            |||||||||||||||     
T  10034091 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 10033992  T
Q  118 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    ||||||||||  ||| ||||||||||||||||| ||||||| |||||||| || |||||||||||||||| |||||||    
T  10033991 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgatcgtccggggtcgccatacggtagaacc 10033914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 13818144 - 13817964
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||| |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||            |||||||||||||    
T  13818144 gagatgagcccgtcaatagtgtgctaaataaatttccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 13818045  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    || ||||||||||  ||| ||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| |||||||    
T  13818044 tgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgagcgaccgcccggggtcgccatacggtagaacc 13817964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 18 - 185
Target Start/End: Original strand, 39657509 - 39657676
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||            ||||||||||||||||    
T  39657509 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatga 39657608  T
Q  118 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccata 185  Q
    ||||||||||  ||| |||||||||||||||||  |||||| |||  |||||| | ||||||||||||    
T  39657609 gcttttgggttgagtctaatgtgcaaaaattatcaatcgagcccgaacgaccgtctggggtcgccata 39657676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 1776377 - 1776556
Alignment:
Q  16 agatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaat 115  Q
    ||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||            ||||||||||||||    
T  1776377 agatgaacctgtcgatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaat 1776476  T
Q  116 gagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    |  ||||| |||  | |||||||| |||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||    
T  1776477 ggactttttggttgactttaatgtacaaaaattatcgatcgagcccgggcgaccgcccggggtcgtcatacggtagaacc 1776556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 36293621 - 36293801
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | || |||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||            |||||||||||||    
T  36293621 gagatgaaactgtaaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 36293720  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    || ||||||||||  ||| |||||| |||||||||| ||||||| |||| ||||||| ||||||||||| ||| |||||||    
T  36293721 tgggcttttgggttgagtctaatgtacaaaaattatcgatcgagtccggacgaccgctcggggtcgccacacggtagaacc 36293801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 39434863 - 39434683
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||||||||||||||| ||||  ||||| | ||||||||||||||||||||||||            |||||||||||||    
T  39434863 gagatgaaactgtcaatagtgtgctaaataaaattcaaagacctatttacatgtgacaattttcagattgcccaaatttttcattttgtaaatgtgttaa 39434764  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    || ||||||||||  ||| ||||||| ||||||||| ||||||| |||||||||||||| ||||||||| ||| |||||||    
T  39434763 tgggcttttgggttgagtctaatgtgaaaaaattatcgatcgagcccgggcgaccgcccagggtcgccacacggtagaacc 39434683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 3155647 - 3155811
Alignment:
Q  31 tagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatgagcttttgggtcaa 130  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||             ||||||||||||||  ||||| |||  |    
T  3155647 tagtgtgctaaataaaattccaagatctatttgcgtgtgacaattttcagattgtccaaatttttctttttataaatgtgttaatggacttttaggttga 3155746  T
Q  131 gtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    ||  |||||||||||||||||||||||| ||| ||||||||||||| |||||||||| |||||||    
T  3155747 gtcgaatgtgcaaaaattattgatcgagcccgagcgaccgcccgggatcgccatacgatagaacc 3155811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 26283318 - 26283484
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||||||||             ||||||||||||    
T  26283318 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaa 26283417  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 181  Q
    ||| ||||| |||  ||| ||||||||||||||||| ||||||| ||||||||||||||| ||||||    
T  26283418 tgaactttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgc 26283484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 12278860 - 12279027
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||||| |||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  12278860 gagatgaacctgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 12278959  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |  || |||||||   || ||||||||||||||||| ||||||| ||||||||||||||||| |||||    
T  12278960 ttggcctttgggttgggtctaatgtgcaaaaattatcgatcgagtccgggcgaccgcccgggatcgcc 12279027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 17332551 - 17332718
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| |||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  17332551 gagatgaatccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttcagattgcccaaatttttctttttgtaagtgtgttaa 17332650  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |  ||||||||||   || |||| |||||||||||| ||||||| |||||||| ||||||||||||||    
T  17332651 ttggcttttgggttgggtctaatatgcaaaaattatcgatcgagcccgggcgaacgcccggggtcgcc 17332718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 31680534 - 31680367
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||| ||||||||||||||||||            |||| ||||||||    
T  31680534 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 31680435  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |  ||||||||||   || ||||| | ||||||||| ||||||| |||||||||||||||||||||||    
T  31680434 ttggcttttgggttgggtctaatgcggaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 31680367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 16155164 - 16155015
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||             ||||||||||||    
T  16155164 gagatgaatctgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcctaaatttttctttttataaatgtgttaa 16155065  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccggg 164  Q
    || ||||||||||  ||| ||||||||||||||||| ||||||| |||||    
T  16155064 tgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggg 16155015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 16333879 - 16334011
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 117  Q
    ||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||            |||||||||||||||     
T  16333879 atgaatccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 16333978  T
Q  118 gcttttgggtcaagtttaatgtgcaaaaattat 150  Q
    ||||||||||  | | |||||||||||||||||    
T  16333979 gcttttgggttgaatctaatgtgcaaaaattat 16334011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 37254808 - 37254641
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||||||||||||| |||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  37254808 gagatgaacccgtcaataatgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 37254709  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |   |||||||||   || ||||||||||||||||| ||||||| | ||||||||||| |||||||||    
T  37254708 ttgacttttgggttgggtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgcc 37254641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 33430488 - 33430335
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  33430488 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 33430389  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgac 168  Q
    |  ||||||||||   || ||||| ||||||||||| ||||||| |||||||||    
T  33430388 ttggcttttgggttgggtctaatgcgcaaaaattatcgatcgagcccgggcgac 33430335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 31501716 - 31501883
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||| | ||||||||||||||||||||||| | |||  |||||||||| || ||||||||||||||||||            |||| ||||||||    
T  31501716 gagatgaactcatcaatagtgtgctaaataaaatttcgagacctatttgcgtgcgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 31501815  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |  ||||||||||   || ||||||||||||||||| ||||||| |||||| | ||||||||||||||    
T  31501816 ttggcttttgggttgggtctaatgtgcaaaaattatcgatcgagcccgggcaatcgcccggggtcgcc 31501883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 36291538 - 36291373
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||||||| ||||||||||||  |||  |||||| |||| | |||||| |||||||||||            |||||||||||||    
T  36291538 gagatgaacccgtcaatagtgtgttaaataaaattctgagacctatttgtgtgtaataattttgagattgcccaaatttttctttttgtaaatgtgttaa 36291439  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcg 180  Q
    ||| ||||| ||| |  | ||||||||||||||||||||||||  |||| ||||||||||| ||||    
T  36291438 tgaacttttaggttagatctaatgtgcaaaaattattgatcgaacccggacgaccgcccggagtcg 36291373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 187
Target Start/End: Complemental strand, 19986106 - 19985934
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||||| |||||||||||| ||||||||||| |||||  ||||||||||||| |||||| ||||| |||||            ||||||||| |||    
T  19986106 gagatgaacctgtcaatagtgtgttaaataaaatttcaagacctatttgcgtgtgataatttttagattacccaaatttttctttttgtaaatgtgctaa 19986007  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacg 187  Q
    ||  |||||||||  | | ||||||||||||||||| |||||||  ||| |||||||||| ||||| ||||||    
T  19986006 tggacttttgggttgaatctaatgtgcaaaaattatcgatcgagctcggacgaccgcccgaggtcgtcatacg 19985934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 43069044 - 43068896
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| ||| |||||||||||||||||||||||| |||  ||||| | ||| | ||||||||||||||||||            |||||||||||||    
T  43069044 gagatgaatccggcaatagtgtgctaaataaaattccgagacttatttacatgtaagaattttcagattgcccaaatttttctttttgtaaatgtgttaa 43068945  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgg 163  Q
    ||  |||||||||   || ||||||| ||||||||||||||||| ||||    
T  43068944 tggacttttgggttgggtctaatgtgaaaaaattattgatcgagcccgg 43068896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 5e-46; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 34948761 - 34948938
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 117  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||            |||||||||||||||     
T  34948761 atgaacccgtcaatagtgtgctaaataaaatttcaagatctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 34948860  T
Q  118 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    ||||||||||  ||| ||||||||||||||||| ||||||| | ||||||||||| |||||||||||||| |||||||    
T  34948861 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgccatacggtagaacc 34948938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 13837985 - 13837808
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||            ||||||||||| |||     
T  13837985 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttgatgt 13837886  T
Q  118 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    ||||||||||  ||| |||||| |||||||||| ||||||  ||| |||| ||||||||||||||||||| |||||||    
T  13837885 gcttttgggttgagtctaatgtacaaaaattatcgatcgaacccgagcgatcgcccggggtcgccatacggtagaacc 13837808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 398784 - 398618
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||||||||  ||||| |||||||||||||||| |||||||||             ||||||||||||    
T  398784 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaa 398685  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 181  Q
    ||||||||| |||  ||| ||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  398684 tgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 398618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 18339273 - 18339106
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||| ||||||||||||||||||            |||| ||||||||    
T  18339273 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaa 18339174  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |  |||||| | |   || ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18339173 ttggcttttagattgggtctaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 18339106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 28996897 - 28996730
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  28996897 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 28996798  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |   ||||| |||   || ||||| ||||||||||| |||||||  ||||||||||||||||||||||    
T  28996797 ttgacttttaggttgggtctaatgcgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgcc 28996730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 29743450 - 29743289
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| ||| || ||||||||||||||||||||| |||  ||||||||||| | ||||||||||||||||||            |||||||||||||    
T  29743450 gagatgaatccggcactagtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgcccaaatttttctttctgtaaatgtgttaa 29743351  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggg 176  Q
    ||| ||||| |||   || ||||||||||||||||| ||| ||| |||||| ||||||||||    
T  29743350 tgaactttttggttgggtctaatgtgcaaaaattatcgattgagcccgggcaaccgcccggg 29743289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 31028451 - 31028531
Alignment:
Q  102 gtaaatgtgttaatgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |||||||||||||||||||||| |||    | ||||||||||||||||| ||||||| |||||| ||||| ||||||||||    
T  31028451 gtaaatgtgttaatgagcttttaggttggatctaatgtgcaaaaattatcgatcgagtccgggcaaccgctcggggtcgcc 31028531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 33229336 - 33229410
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 89  Q
    |||||||| ||| ||||||||||||||||||||| || |||  ||||| ||||| | ||||||||||||||||||    
T  33229336 gagatgaatccggcaatagtgtgctaaataaaatcccgagacttatttacgtgtaagaattttcagattgcccaa 33229410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 13647053 - 13647017
Alignment:
Q  146 attattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  13647053 attatcgatcgagcccgggcgaccgcccggggtcgcc 13647017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 29728386 - 29728566
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||||||||||||||||||||||||||||||| ||||  ||||||||||| ||||||||||||||||||||            |||||||||||||    
T  29728386 gagatgaacccgtcaatagtgtgctaaataaaattcgaagacctatttgcgtgtcacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 29728485  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    |||||||||||||  ||| |||||||||||| |||| |||||||  |||||||||| |||||||||||||||| |||||||    
T  29728486 tgagcttttgggttgagtctaatgtgcaaaatttatcgatcgagcacgggcgaccgtccggggtcgccatacggtagaacc 29728566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 15838449 - 15838273
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||            |||||||||||||||     
T  15838449 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgaaaattttcagattgcccaa-atttttcttttgtaaatgtgttaatgg 15838351  T
Q  118 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
     ||||| |||  |||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||| |||||||    
T  15838350 actttttggttgagtttaatgtgcaaaaattatcaatcgagcccgggtgaccgcccggggtcgccatacggtagaacc 15838273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 3648794 - 3648974
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||||| |  || |||||||||||||||||||||||||||||            |||||||||||||    
T  3648794 gagatgaacccgtcaatagtgtgctaaataaaattccaaaacctacttgcgtgtgacaattttcagattgcccaaaattttctttttgtaaatgtgttaa 3648893  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    || ||||||||||  ||| ||||||| ||||||||| ||||||| ||||||||| | || || |||||||||| |||||||    
T  3648894 tgggcttttgggttgagtctaatgtgaaaaaattatcgatcgagcccgggcgactgtcccggatcgccatacggtagaacc 3648974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 178
Target Start/End: Original strand, 16788025 - 16788188
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| | |||| |||||||||||            |||| ||||||||    
T  16788025 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgagagttttaagattgcccaaatttttctttttgtaagtgtgttaa 16788124  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggt 178  Q
    |  ||||||||||  ||| ||||||||||||||||| ||||||| |||||||||||||||||||    
T  16788125 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggt 16788188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 39914681 - 39914516
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||||||||  ||||| | |||||||||||||| |||||||||             ||||||||||||    
T  39914681 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacttgtgacaattttcaaattgcccaaatttttttttta-taaatgtgttaa 39914583  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 181  Q
    ||||||||| |||  ||| ||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  39914582 tgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 39914516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 34136825 - 34136993
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||||||||| | |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  34136825 gagatgaacccatcaattgtgtgctaaataaaatttcgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 34136924  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcca 183  Q
    |   |||||||||  ||| ||||||||||||||||| ||||||| |||||||||||| |||||||||||    
T  34136925 ttgacttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgctcggggtcgcca 34136993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 4404175 - 4404008
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||||||||||| |||  ||||||||||||| |||||| |||||||||||            |||| | ||||||    
T  4404175 gagatgaacccatcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgtaagtatgttaa 4404076  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |  ||||||||||  ||| ||||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  4404075 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcctggggtcgcc 4404008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 23402275 - 23402108
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||||| |||||||||||| ||||||||||| | |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  23402275 gagatgaaccagtcaatagtgtgttaaataaaatttcgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 23402176  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |  ||||||||||   || |||| |||||| ||||| ||||||| |||||||||||||||||||||||    
T  23402175 ttggcttttgggttgggtctaatatgcaaagattatcgatcgagcccgggcgaccgcccggggtcgcc 23402108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 36408718 - 36408551
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| ||| |||||||||| ||||||||||||  |||  |||| |||||| | |||||||| |||||| ||            |||||||||||||    
T  36408718 gagatgaatccggcaatagtgtgttaaataaaattctgagacctattagcgtgtaagaattttcaaattgccaaaaattttctttttgtaaatgtgttaa 36408619  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    ||  |||||||||    | ||||||||||||||||| ||||||| ||||||||||||||| |||||||    
T  36408618 tggacttttgggttggatctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgcc 36408551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 42231104 - 42231030
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 89  Q
    |||||||| |||||||||||||||||||||||||||  |||  ||||||| | ||| |||||||| |||||||||    
T  42231104 gagatgaatccgtcaatagtgtgctaaataaaattctgagacctatttgcatatgagaattttcaaattgcccaa 42231030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 9877374 - 9877313
Alignment:
Q  28 caatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 89  Q
    |||||||||||||||||||||| | |||  ||||||| ||||| ||||||||||||||||||    
T  9877374 caatagtgtgctaaataaaatttcgagacctatttgcatgtgagaattttcagattgcccaa 9877313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 182
Target Start/End: Original strand, 2729288 - 2729363
Alignment:
Q  107 tgtgttaatgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |||||||||| |||||||| |    ||||||||| ||||||||| ||||||| ||||||| |||||||||||||||    
T  2729288 tgtgttaatgggcttttggattggatttaatgtgtaaaaattatcgatcgagcccgggcgtccgcccggggtcgcc 2729363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 40470475 - 40470509
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaatt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  40470475 gagatgaacccgtcaatagtgtgctaaataaaatt 40470509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 4e-43; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 34084122 - 34084302
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||| |||||||||||||||||||||||||||||  ||||||||||||| |||||||| |||||||||            |||||||||||||    
T  34084122 gagatgaacccatcaatagtgtgctaaataaaattccaagacctatttgcgtgtgataattttcatattgcccaaatttttctttttgtaaatgtgttaa 34084221  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    ||  ||||| |||  | ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||    
T  34084222 tggactttttggttgaatttaatgtgcaaaaattatcgatcgagtccgggcgaccgcccggggtcgccatacggtagaacc 34084302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 22968444 - 22968624
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | |||||||||||||||||||||||| |||||  ||||| |||||||||||||| |||||||||||            |||||||||||||    
T  22968444 gagatgaaactgtcaatagtgtgctaaataaaatttcaagacctatttacgtgtgacaatttttagattgcccaaatttttctttttgtaaatgtgttaa 22968543  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    || |||||||||| |||| ||||||||||||||||| ||||||| |||| ||||||||||||||||| | ||| |||||||    
T  22968544 tgggcttttgggttaagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgctacacggtagaacc 22968624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 6269427 - 6269606
Alignment:
Q  16 agatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaat 115  Q
    ||||||| | ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||            ||||||||||||||    
T  6269427 agatgaaactgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaat 6269526  T
Q  116 gagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    | ||||||||||  ||| ||||||||||||||||| ||||||| |||| |||||||||||| |||| | ||| |||||||    
T  6269527 gggcttttgggttgagtctaatgtgcaaaaattatcgatcgagtccggacgaccgcccgggatcgctacacggtagaacc 6269606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 19390313 - 19390132
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||            |||||||||||||    
T  19390313 gagatgaaactgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 19390214  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacct 196  Q
    |   ||||| |||  ||| ||||||||||||||||| ||||||  |||| ||||||||||||||||||| ||| ||||||||    
T  19390213 tagacttttaggttgagtctaatgtgcaaaaattatcgatcgaacccggacgaccgcccggggtcgccacacggtagaacct 19390132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 45183148 - 45182981
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||  |||||| |||||| ||||||||||||||||||            |||| ||||||||    
T  45183148 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgtgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 45183049  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |  ||||||||||   || ||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  45183048 ttggcttttgggttgggtctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 45182981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 27935345 - 27935177
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||||||||||||||| |||||||||||||||| |||  ||||| ||| ||| ||||||||||||||||||            |||| ||||||||    
T  27935345 gagatgaacccgtcaatagtatgctaaataaaattccgagacctattttcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 27935246  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcca 183  Q
    |||||||||||||   |||||||||||||||||||| ||||||| ||||||||| |||| |||| ||||    
T  27935245 tgagcttttgggttgggtttaatgtgcaaaaattatcgatcgagcccgggcgactgcccagggttgcca 27935177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 40081741 - 40081918
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||| |||||||||            |||||||||||||    
T  40081741 gagatgaacccgtcaatagtgtgctaaaaaaaat-ccaagatctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaa 40081839  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    ||||||||| |||  ||| |||||| |||||||||| ||||||| ||||||||||  || | ||||||||||| |||||||    
T  40081840 tgagctttt-ggttgagtctaatgttcaaaaattatcgatcgagcccgggcgacc-tccagagtcgccatacggtagaacc 40081918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 11018212 - 11018379
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||| ||||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  11018212 gagatgaacccgtcaattgtgtgctaaataaaattctgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 11018311  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |  ||||||||||  ||| ||||||||||||||||| ||||||| | |||||||||||||| ||||||    
T  11018312 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcccggagtcgcc 11018379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 39771957 - 39771791
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||  |||||||||| |||||  ||||| ||||||||||||||||||||||||||             ||||||||||||    
T  39771957 gagatgaaactgtcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaa 39771858  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 181  Q
    || ||||||||||  ||| ||||||||||||||||| || |||| ||||||||||||||||||||||    
T  39771857 tgggcttttgggttgagtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgc 39771791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 6930894 - 6931061
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||| ||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||| ||            |||||||||||||    
T  6930894 gagatgaactcgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcctaaatttttctttttgtaaatgtgttaa 6930993  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |  ||||||||||    | ||||| ||||||||||| ||||||| ||||||||||| |||||||||||    
T  6930994 ttggcttttgggttggatctaatgcgcaaaaattatcgatcgagcccgggcgaccgtccggggtcgcc 6931061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 33041120 - 33040953
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| |||||||| ||||  |||            |||| ||||||||    
T  33041120 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttcaaattgttcaaatttttctttttgtaagtgtgttaa 33041021  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    | |||||||||||   || |||| ||||||||||||  |||||| ||| |||||||||||||||||||    
T  33041020 ttagcttttgggttgggtctaatatgcaaaaattatcaatcgagcccgagcgaccgcccggggtcgcc 33040953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 45336041 - 45335875
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| ||| || |||||||||||||||||||||||||  ||||||||||| | |||||||||||||||||             |||||||||||||    
T  45336041 gagatgaatccggcactagtgtgctaaataaaattccaagacctatttgcgtgtaagaattttcagattgcccagatttttctttttgtaaatgtgttaa 45335942  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    ||| ||||| |||   || ||||||| ||||||||| ||| ||| ||||||||||||||| |||||||    
T  45335941 tga-ctttttggttgggtctaatgtgtaaaaattatcgattgagtccgggcgaccgcccgaggtcgcc 45335875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 6503569 - 6503736
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||||||| ||| |||  ||||||| ||||| ||||||||||||||  ||            |||| |||| |||    
T  6503569 gagatgaacccatcaattgtgtgctaaataaaaatccgagacctatttgcctgtgagaattttcagattgcttaaatttttctttttgtaagtgtgctaa 6503668  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |  ||||||||||  ||| |||| ||||||||| || ||||||| |||||||||||||||||||||||    
T  6503669 ttggcttttgggttgagtctaatttgcaaaaataatcgatcgagcccgggcgaccgcccggggtcgcc 6503736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 35514429 - 35514355
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 89  Q
    |||||||||||||||||||||||| |||||||||||| |||  |||||||| |||| |||||||| |||| ||||    
T  35514429 gagatgaacccgtcaatagtgtgcaaaataaaattcctagacctatttgcgagtgagaattttcatattgtccaa 35514355  T

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Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 22922262 - 22922214
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttg 63  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  22922262 gagatgaacccgtcaatagtgtgttaaataaaattccaagatctatttg 22922214  T

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Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 182
Target Start/End: Original strand, 19565517 - 19565668
Alignment:
Q  31 tagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatgagcttttgggtcaa 130  Q
    ||||||||||||||||||||| |||  ||||||||||| | ||||||||||||| ||||            |||||||||||||||   |||| |||       
T  19565517 tagtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgtccaaatttttctttttgtaaatgtgttaatggattttttggttgg 19565616  T
Q  131 gtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    || ||||||||||||||||| ||| ||  ||||||||||||||||| |||||    
T  19565617 gtctaatgtgcaaaaattatcgattgaacccgggcgaccgcccgggatcgcc 19565668  T

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Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 22922209 - 22922152
Alignment:
Q  130 agtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacg 187  Q
    |||||||||||||||||| || ||||||| ||| ||||||||||||| ||||||||||    
T  22922209 agtttaatgtgcaaaaatgatcgatcgagcccgagcgaccgcccgggatcgccatacg 22922152  T

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Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 5135455 - 5135421
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaatt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  5135455 gagatgaacccgtcaatagtgtgctaaataaaatt 5135421  T

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Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 5354757 - 5354709
Alignment:
Q  134 taatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |||||||  |||||||  ||||||| |||||||||||||||||||||||    
T  5354757 taatgtgagaaaattaaggatcgagcccgggcgaccgcccggggtcgcc 5354709  T

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Target: chr1 (Bit Score: 86; Significance: 3e-41; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 7433609 - 7433432
Alignment:
Q  18 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 117  Q
    |||||||||||||||||||||||||||||||| |||||  |||||| ||||||||||||| |||||||||||            |||||||||||||||     
T  7433609 atgaacccgtcaatagtgtgctaaataaaatttcaagacctatttgtgtgtgacaatttttagattgcccaaaattttctttttgtaaatgtgttaatgg 7433510  T
Q  118 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    ||||||||||  ||| ||||||||||||||||| |||||||  |||||||||||||||||| |||||||| |||||||    
T  7433509 gcttttgggttgagtctaatgtgcaaaaattatagatcgagctcgggcgaccgcccggggttgccatacggtagaacc 7433432  T

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Target: chr1; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 42310941 - 42311121
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||| || |||||||||||| |||||  ||||||||||||||||||||||||||||||||            |||||||||||||    
T  42310941 gagatgaacccgtcaatagcgtactaaataaaatttcaagacttatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 42311040  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
     | ||||||||||  ||| ||||||||||||||||| ||||||| |||||||| || | |||||||||||||| |||||||    
T  42311041 cgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgatcgtctggggtcgccatacggtagaacc 42311121  T

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Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 26144422 - 26144256
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||||||||  ||||| |||||||||||||||| |||||||||             ||||||||||||    
T  26144422 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaa 26144323  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 181  Q
    ||||||||| |||  ||| ||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  26144322 tgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 26144256  T

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Target: chr1; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 32982056 - 32982236
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | |||||||| |||||||||||||||||||||  |||||| |||||||||||||||||||| ||||            |||||| ||||||    
T  32982056 gagatgaatctgtcaatagagtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgtccaaatttttctttttgtaaatatgttaa 32982155  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    || |||||| |||   || ||||||||||||||||| ||||| | ||| |||||||||||||||||||||||| |||||||    
T  32982156 tgggcttttaggttgggtctaatgtgcaaaaattatcgatcgggcccgcgcgaccgcccggggtcgccatacggtagaacc 32982236  T

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Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 178
Target Start/End: Complemental strand, 3829150 - 3828988
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||| ||| ||||||||||||||||||            |||| ||||||||    
T  3829150 gagatgaacccgtcaatagtgtgctaaataaaattcc-agacctatttgcgtatgaaaattttcagattgcccaaatttttctttttgtaagtgtgttaa 3829052  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggt 178  Q
    ||| |||||||||   |||||||||||||||||||| ||||||  ||| ||||||| |||||||    
T  3829051 tgaacttttgggttgggtttaatgtgcaaaaattatcgatcgaacccgagcgaccgtccggggt 3828988  T

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Target: chr1; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 17445479 - 17445313
Alignment:
Q  16 agatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaat 115  Q
    ||||||||||||||||| |||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| |||||||||    
T  17445479 agatgaacccgtcaataatgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaat 17445380  T
Q  116 gagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
       |||||||||    | |||||| ||||||||||||||| || ||||||||||||  |||||||||    
T  17445379 tgacttttgggttggatctaatgtacaaaaattattgatccagcccgggcgaccgcatggggtcgcc 17445313  T

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Target: chr1; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 35907719 - 35907552
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||| |||||||| |||||||||||||||||| |||  ||||||||||||| |||||||||||| |||||            |||| |||  |||    
T  35907719 gagatgaactcgtcaataatgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattacccaaaattttctttttgtaagtgtactaa 35907620  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |  ||||||||||   || ||||||||||||||||| |||| || ||||||||||||||| |||||||    
T  35907619 ttggcttttgggttgggtctaatgtgcaaaaattatcgatcaagcccgggcgaccgcccgaggtcgcc 35907552  T

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Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 321377 - 321451
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 89  Q
    |||||||||||||||||| |||| ||||||||||||| |||  ||||||| | ||| ||||||||||||||||||    
T  321377 gagatgaacccgtcaataatgtgttaaataaaattccgagacctatttgcatatgagaattttcagattgcccaa 321451  T

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Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 33489873 - 33489839
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaatt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  33489873 gagatgaacccgtcaatagtgtgctaaataaaatt 33489839  T

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Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 41972256 - 41972290
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaatt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  41972256 gagatgaacccgtcaatagtgtgctaaataaaatt 41972290  T

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Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 41972394 - 41972440
Alignment:
Q  134 taatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 181  Q
    ||||||||||||||||| ||||||| || |||||||||||||||||||    
T  41972394 taatgtgcaaaaattatcgatcgag-ccaggcgaccgcccggggtcgc 41972440  T

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Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 195
Target Start/End: Complemental strand, 23313319 - 23313225
Alignment:
Q  102 gtaaatgtgttaatgagcttttgggtcaagtttaatgtgcaa-aaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    |||||||||||||||| |||||  ||  ||| |||||||||| |||| ||  |||||| |||||| |||||||| | |||||||||| |||||||    
T  23313319 gtaaatgtgttaatgaacttttatgttgagtctaatgtgcaacaaatcatcaatcgagcccgggcaaccgcccgagatcgccatacggtagaacc 23313225  T

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Target: scaffold0002 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 181
Target Start/End: Original strand, 480457 - 480623
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||||||||  ||||| |||||||||||||||| |||||||||             ||||||||||||    
T  480457 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaa 480556  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 181  Q
    ||||||||| |||  ||| ||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  480557 tgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 480623  T

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Target: scaffold0069 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 18009 - 17829
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | |||||||||||||||||||||||| |||||  ||||| | ||||||||||||||||||||||||            |||||||||||||    
T  18009 gagatgaaactgtcaatagtgtgctaaataaaatttcaagacctatttacatgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 17910  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 195  Q
    || ||||||||||  ||| ||||||||||||||||| ||||||| |||| ||| ||| ||||||||||| ||| |||||||    
T  17909 tgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgatcgctcggggtcgccacacggtagaacc 17829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 5397 - 5230
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||| ||||||||||||||||||            |||| ||||||||    
T  5397 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaa 5298  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    |  |||||| | |   || ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5297 ttggcttttagattgggtctaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 5230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 689 - 523
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||| | ||||||||||||| ||||||||||||||||  ||||| |||||||||||||||| |||||||||             ||||||||||||    
T  689 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaa 590  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 181  Q
    ||||||||| |||  ||| ||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  589 tgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgc 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 53092 - 52944
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||| ||||||||||||| ||||            |||||||||||||    
T  53092 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgtccaaatttttctttttgtaaatgtgttaa 52993  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgg 163  Q
    |  |||||||||| || | ||||||||||||||||| ||||||| ||||    
T  52992 ttggcttttgggttaaatctaatgtgcaaaaattatcgatcgagcccgg 52944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 31647 - 31480
Alignment:
Q  15 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 114  Q
    |||||||||| ||||||||||||| |||||||||| | |||  |||||||| |||| ||||||||||||| ||||            |||| ||||||||    
T  31647 gagatgaacctgtcaatagtgtgcaaaataaaattactagacctatttgcgagtgagaattttcagattgtccaaatttttctttttgtaagtgtgttaa 31548  T
Q  115 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 182  Q
    || ||||||||||   || || |||||||||||||| ||||||| ||||||||||| | |||||||||    
T  31547 tgggcttttgggttgggtctagtgtgcaaaaattatcgatcgagcccgggcgaccgtctggggtcgcc 31480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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