View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18504_high_13 (Length: 274)
Name: NF18504_high_13
Description: NF18504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18504_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 17 - 264
Target Start/End: Complemental strand, 32702446 - 32702199
Alignment:
| Q |
17 |
tcattccactagattagagacaagaaggagggaaaaacgtgctttgtcttgaacctgacaatcacaaacacgtgggctttctttcttatctgacaaaaca |
116 |
Q |
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| T |
32702446 |
tcattccactagattagagacatgaaggagggaaaaacgtgctttgtcttgaacctgacaatcacaaacacgtgggctttctttcttatctgacaaaaca |
32702347 |
T |
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| Q |
117 |
tagcaccagaaaaacctgtatacgttggatatagtttattgttattattgtcttttaatataaataaatttttgaaacaattttctatggttgctggaaa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32702346 |
tagcaccagaaaaacctgtatacgttggatatagtttattgttattattgtcttttaatataaataaatttttgaaacaattttctatggttgctggaaa |
32702247 |
T |
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| Q |
217 |
aatgaaagaaagaagccaagttgtttgtttgcttttatatataagcag |
264 |
Q |
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|||||||||||||||||||||| |||||||| |||||||||||||||| |
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| T |
32702246 |
aatgaaagaaagaagccaagttatttgtttgtttttatatataagcag |
32702199 |
T |
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