View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18504_high_8 (Length: 414)

Name: NF18504_high_8
Description: NF18504
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18504_high_8
NF18504_high_8
[»] chr3 (25 HSPs)
chr3 (11-244)||(9018623-9018856)
chr3 (265-323)||(9019047-9019105)
chr3 (320-397)||(36185878-36185955)
chr3 (321-395)||(8036964-8037038)
chr3 (321-397)||(16653492-16653567)
chr3 (321-397)||(19012387-19012462)
chr3 (320-397)||(27446186-27446263)
chr3 (320-397)||(49053399-49053476)
chr3 (324-397)||(50416478-50416551)
chr3 (323-368)||(38345277-38345322)
chr3 (328-397)||(47924339-47924408)
chr3 (321-397)||(12974164-12974239)
chr3 (67-134)||(8755122-8755189)
chr3 (320-382)||(50416552-50416614)
chr3 (324-377)||(19012555-19012608)
chr3 (80-168)||(9108006-9108094)
chr3 (321-397)||(20127146-20127222)
chr3 (325-377)||(36185725-36185777)
chr3 (324-382)||(8036798-8036856)
chr3 (327-377)||(27437833-27437883)
chr3 (350-399)||(14743567-14743616)
chr3 (328-377)||(49053227-49053276)
chr3 (320-368)||(16276663-16276711)
chr3 (324-368)||(47225758-47225802)
chr3 (350-390)||(49450547-49450587)
[»] chr2 (25 HSPs)
chr2 (320-397)||(34726769-34726846)
chr2 (321-399)||(24183568-24183646)
chr2 (320-397)||(37867148-37867225)
chr2 (321-397)||(42364487-42364563)
chr2 (321-395)||(12449218-12449292)
chr2 (320-397)||(31711504-31711581)
chr2 (320-397)||(31783787-31783864)
chr2 (321-393)||(15252997-15253069)
chr2 (321-397)||(19246657-19246733)
chr2 (321-397)||(20194000-20194076)
chr2 (321-397)||(20661568-20661644)
chr2 (329-397)||(16111516-16111584)
chr2 (321-397)||(44915464-44915540)
chr2 (324-382)||(25575321-25575379)
chr2 (320-397)||(22596477-22596554)
chr2 (324-381)||(44915289-44915346)
chr2 (324-371)||(15150290-15150337)
chr2 (325-368)||(16111707-16111750)
chr2 (324-382)||(12449052-12449110)
chr2 (321-382)||(23182213-23182274)
chr2 (321-382)||(23593470-23593531)
chr2 (324-368)||(20661394-20661438)
chr2 (321-397)||(22588491-22588567)
chr2 (325-377)||(30777294-30777346)
chr2 (325-377)||(37867348-37867400)
[»] chr7 (22 HSPs)
chr7 (321-397)||(43742244-43742320)
chr7 (323-397)||(34227849-34227923)
chr7 (321-397)||(7843692-7843768)
chr7 (321-399)||(44426593-44426671)
chr7 (321-399)||(31365266-31365344)
chr7 (321-397)||(26945687-26945763)
chr7 (321-397)||(46004508-46004584)
chr7 (321-397)||(38837702-38837778)
chr7 (321-397)||(41065942-41066018)
chr7 (350-397)||(5728704-5728751)
chr7 (321-384)||(7845083-7845146)
chr7 (321-395)||(5728620-5728694)
chr7 (319-369)||(41065761-41065811)
chr7 (321-397)||(6620614-6620690)
chr7 (325-377)||(44426792-44426844)
chr7 (350-397)||(31192529-31192576)
chr7 (324-377)||(924495-924548)
chr7 (324-377)||(5728873-5728926)
chr7 (324-365)||(26945512-26945553)
chr7 (324-377)||(32604719-32604772)
chr7 (325-382)||(34227675-34227732)
chr7 (321-381)||(31940693-31940753)
[»] chr4 (47 HSPs)
chr4 (321-397)||(9813118-9813194)
chr4 (323-397)||(16474993-16475067)
chr4 (321-397)||(12722911-12722987)
chr4 (321-397)||(38563934-38564010)
chr4 (323-397)||(31763081-31763155)
chr4 (320-397)||(21995664-21995741)
chr4 (322-399)||(33883454-33883531)
chr4 (321-397)||(10374038-10374114)
chr4 (321-397)||(17109892-17109967)
chr4 (323-399)||(36309413-36309489)
chr4 (321-397)||(36924236-36924312)
chr4 (322-397)||(2124518-2124593)
chr4 (320-395)||(6806469-6806544)
chr4 (321-399)||(43374442-43374520)
chr4 (327-397)||(55660415-55660485)
chr4 (320-397)||(8157262-8157339)
chr4 (321-397)||(8166051-8166127)
chr4 (321-397)||(54895399-54895475)
chr4 (323-397)||(1492669-1492743)
chr4 (321-397)||(37059888-37059964)
chr4 (321-396)||(53865059-53865134)
chr4 (321-399)||(30779677-30779755)
chr4 (320-397)||(9967843-9967920)
chr4 (325-382)||(31762928-31762985)
chr4 (325-377)||(2124343-2124395)
chr4 (321-397)||(25715700-25715776)
chr4 (325-368)||(51836326-51836369)
chr4 (318-377)||(54895576-54895635)
chr4 (337-395)||(6768414-6768472)
chr4 (324-382)||(36924432-36924490)
chr4 (359-397)||(41025236-41025274)
chr4 (324-382)||(43375509-43375567)
chr4 (321-382)||(562770-562831)
chr4 (320-397)||(27872972-27873043)
chr4 (324-376)||(6841819-6841871)
chr4 (353-393)||(6841997-6842037)
chr4 (321-393)||(33871255-33871327)
chr4 (325-368)||(6768599-6768642)
chr4 (321-391)||(52325101-52325169)
chr4 (327-377)||(25715644-25715694)
chr4 (324-382)||(33883292-33883350)
chr4 (319-377)||(41025054-41025112)
chr4 (324-370)||(53526452-53526498)
chr4 (324-377)||(8165760-8165813)
chr4 (330-395)||(42788650-42788715)
chr4 (320-377)||(53865236-53865293)
chr4 (321-397)||(47567891-47567967)
[»] chr6 (14 HSPs)
chr6 (320-397)||(10588926-10589003)
chr6 (321-395)||(19284366-19284440)
chr6 (320-393)||(25119447-25119520)
chr6 (321-397)||(7371071-7371147)
chr6 (321-397)||(21384962-21385038)
chr6 (321-397)||(22857650-22857726)
chr6 (327-395)||(20522823-20522891)
chr6 (320-390)||(26713154-26713223)
chr6 (324-377)||(21384787-21384840)
chr6 (324-377)||(25119104-25119157)
chr6 (321-397)||(11140429-11140504)
chr6 (327-377)||(20522670-20522720)
chr6 (324-382)||(22857486-22857544)
chr6 (325-377)||(19281282-19281334)
[»] chr5 (25 HSPs)
chr5 (321-397)||(7286748-7286824)
chr5 (321-399)||(39861751-39861829)
chr5 (320-397)||(39086511-39086588)
chr5 (321-397)||(5411729-5411805)
chr5 (321-397)||(23155520-23155596)
chr5 (323-399)||(42746516-42746592)
chr5 (321-399)||(20134370-20134448)
chr5 (320-393)||(3340584-3340657)
chr5 (321-399)||(15559044-15559122)
chr5 (319-397)||(36864060-36864138)
chr5 (320-397)||(11660955-11661032)
chr5 (319-399)||(20696298-20696378)
chr5 (325-397)||(35662066-35662138)
chr5 (321-397)||(39166313-39166389)
chr5 (321-382)||(22671985-22672046)
chr5 (328-397)||(11376554-11376622)
chr5 (321-377)||(16552242-16552298)
chr5 (328-382)||(703732-703786)
chr5 (324-382)||(11660791-11660849)
chr5 (327-381)||(39166152-39166206)
chr5 (324-377)||(20134197-20134250)
chr5 (361-397)||(33857516-33857552)
chr5 (325-377)||(35662226-35662278)
chr5 (325-381)||(36864257-36864313)
chr5 (325-377)||(42746836-42746888)
[»] chr1 (29 HSPs)
chr1 (321-397)||(12070583-12070659)
chr1 (321-397)||(31763770-31763846)
chr1 (321-397)||(32595099-32595175)
chr1 (324-397)||(14229334-14229407)
chr1 (321-397)||(17893246-17893322)
chr1 (321-397)||(11354484-11354560)
chr1 (321-397)||(33156987-33157062)
chr1 (321-391)||(9041030-9041100)
chr1 (325-399)||(42134104-42134178)
chr1 (321-397)||(47693839-47693915)
chr1 (322-393)||(45849286-45849357)
chr1 (324-382)||(14229170-14229228)
chr1 (328-397)||(1395166-1395235)
chr1 (324-377)||(10974631-10974684)
chr1 (325-397)||(9628572-9628644)
chr1 (321-397)||(14389839-14389915)
chr1 (322-397)||(51904855-51904930)
chr1 (331-397)||(18928783-18928849)
chr1 (352-397)||(6708343-6708388)
chr1 (325-377)||(18928948-18929000)
chr1 (324-368)||(42133942-42133986)
chr1 (329-397)||(46590732-46590800)
chr1 (324-382)||(1395339-1395397)
chr1 (320-370)||(11422570-11422620)
chr1 (359-397)||(29945250-29945288)
chr1 (324-382)||(31763961-31764019)
chr1 (328-382)||(47693666-47693722)
chr1 (325-377)||(17811276-17811328)
chr1 (321-393)||(49992513-49992585)
[»] chr8 (26 HSPs)
chr8 (320-397)||(6783428-6783504)
chr8 (321-397)||(10586034-10586110)
chr8 (321-397)||(34343244-34343320)
chr8 (320-399)||(8439159-8439238)
chr8 (320-399)||(18757180-18757259)
chr8 (321-397)||(185876-185952)
chr8 (321-397)||(17656613-17656689)
chr8 (321-397)||(17792865-17792941)
chr8 (321-389)||(23940977-23941045)
chr8 (321-393)||(15808880-15808952)
chr8 (324-377)||(34343444-34343497)
chr8 (321-397)||(24473218-24473293)
chr8 (324-381)||(204932-204987)
chr8 (324-381)||(319769-319824)
chr8 (327-399)||(205018-205089)
chr8 (327-399)||(319855-319926)
chr8 (320-384)||(23567480-23567544)
chr8 (321-397)||(35448229-35448305)
chr8 (325-368)||(18757330-18757373)
chr8 (326-377)||(23567636-23567687)
chr8 (352-395)||(35116768-35116811)
chr8 (351-397)||(32644220-32644266)
chr8 (315-377)||(35448603-35448665)
chr8 (324-377)||(15809833-15809886)
chr8 (328-377)||(27506708-27506757)
chr8 (360-397)||(27506879-27506916)
[»] scaffold0129 (1 HSPs)
scaffold0129 (321-397)||(20093-20169)
[»] scaffold0126 (1 HSPs)
scaffold0126 (320-397)||(37627-37704)
[»] scaffold0102 (3 HSPs)
scaffold0102 (321-397)||(33611-33687)
scaffold0102 (324-377)||(33810-33862)
scaffold0102 (321-369)||(15902-15950)
[»] scaffold0031 (1 HSPs)
scaffold0031 (318-397)||(80840-80919)
[»] scaffold0009 (1 HSPs)
scaffold0009 (329-391)||(51908-51970)
[»] scaffold0117 (1 HSPs)
scaffold0117 (324-393)||(17917-17985)
[»] scaffold0004 (1 HSPs)
scaffold0004 (321-397)||(95994-96070)
[»] scaffold0249 (2 HSPs)
scaffold0249 (321-397)||(23706-23784)
scaffold0249 (324-377)||(23542-23595)
[»] scaffold0019 (1 HSPs)
scaffold0019 (324-382)||(72690-72748)
[»] scaffold0516 (1 HSPs)
scaffold0516 (324-377)||(1241-1294)


Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 9018623 - 9018856
Alignment:
Q  11 cacagagctagggacggattctacgagaaagcttcaaaaggaaattacacgtaaaataacaaaaaattattcaaagagtaagaagagtccaagtcaattt 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9018623 cacatagctagggacggattctacgagaaagcttcaaaaggaaattacacgtaaaataacaaaaaattattcaaagagtaagaagagtccaagtcaattt 9018722  T
Q  111 ttaaaacataaacatgtgtccttatggaggtagaattcatcaaagaaaaagcaattaataaaacatatcacaaccaatcattctaattggttgtttaaca 210  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  9018723 ttaaaacataaacatgtgtccttatggtggttgaattcatcaaagaaaaagcaattaacaaaacatatcacaaccaatcattctaattggttgttcaaca 9018822  T
Q  211 aaatgaacagcacacaatcttacataaacatcta 244  Q
    ||||||||||||||||||||||||||||||||||    
T  9018823 aaatgaacagcacacaatcttacataaacatcta 9018856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 9019047 - 9019105
Alignment:
Q  265 tatgatacaacgtttgcataattgtctctcaagctccggctgtccacgttatatgtggg 323  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  9019047 tatgatacaacgtttgcataattgtctctgaagctccggctgtccacgttatctgtggg 9019105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 36185955 - 36185878
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||||| |||||  ||||||| ||||||||||| || ||||| |||||||||||||||||||    
T  36185955 tgggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaaatggttttggagtacaactcaca 36185878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 395
Target Start/End: Complemental strand, 8037038 - 8036964
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactca 395  Q
    ||||||||||||||||||| | |||||  ||||||| ||||||||||| |||||||| |||||||||||||||||    
T  8037038 gggtgcggttatggtgcatgaggaaatccttatgcaccctgcataaatccaaaaatggttttggagtacaactca 8036964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 16653492 - 16653567
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||||||| || ||||| ||||| |||||||||||||    
T  16653492 gggtgcggttatggtgcataaggaaattcttatgca-cctgcataaatccagaaatggttttgaagtacaactcaca 16653567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 19012387 - 19012462
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||||||| || ||||| ||||| |||||||||||||    
T  19012387 gggtgcggttatggtgcataaggaaattcttatgca-cctgcataaatccagaaatggttttgaagtacaactcaca 19012462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 27446263 - 27446186
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||| |||||||||||||| |||||  ||||||| | |||||||||||| ||||| ||||||||||||| |||||    
T  27446263 tgggtgcagttatggtgcataaggaaatccttatgcaccttgcataaattcagaaatggttttggagtacaattcaca 27446186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 49053476 - 49053399
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||||| ||||| ||||| || ||||||||||| || ||||  ||||| |||||||||||||    
T  49053476 tgggtgcggttatggtgcataaggaaatctttatccaccctgcataaatccagaaatagttttgaagtacaactcaca 49053399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 397
Target Start/End: Original strand, 50416478 - 50416551
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||| |||||  ||||||| ||||||||||| || ||||| ||||||||||||| |||||    
T  50416478 tgcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaaatggttttggagtacaattcaca 50416551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 323 - 368
Target Start/End: Original strand, 38345277 - 38345322
Alignment:
Q  323 gtgcggttatggtgcataaagaaatttttatgcatcctgcataaat 368  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||    
T  38345277 gtgcggttatggtgcataaagaaatctttatgcaccctgcataaat 38345322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 47924408 - 47924339
Alignment:
Q  328 gttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||| |||||  ||||||| |||||||||||  | ||||||||||| |||||||||||||    
T  47924408 gttatggtgcataaggaaatccttatgcaccctgcataaatcaagaaatgattttgcagtacaactcaca 47924339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 12974239 - 12974164
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||  ||||||| ||||||||||| || ||||| | |||| ||||||||||||    
T  12974239 gggtgcggttatggtgcataaggaaatccttatgca-cctgcataaatccagaaatggtgttggtgtacaactcaca 12974164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 8755122 - 8755189
Alignment:
Q  67 taacaaaaaattattcaaagagtaagaagagtccaagtcaatttttaaaacataaacatgtgtcctta 134  Q
    ||||||||| || ||||||  || |||||||| |||||||||||||||||||||| |||| |||||||    
T  8755122 taacaaaaacttcttcaaaatgttagaagagttcaagtcaatttttaaaacataaccatgggtcctta 8755189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 382
Target Start/End: Complemental strand, 50416614 - 50416552
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    |||||||||||||||||||||| |||||  ||||||| ||||||||||| || ||||| ||||    
T  50416614 tgggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaaatggtttt 50416552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 19012608 - 19012555
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||| || |||||    
T  19012608 tgcggttatggtgcataaggaaattcttatgcaccctgcataaatccagaaatg 19012555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 9108006 - 9108094
Alignment:
Q  80 ttcaaagagtaagaagagtccaagtcaatttttaaaacataaacatgtgtccttatggaggtagaattcatcaaagaaaaagcaattaa 168  Q
    ||||||||||| ||||||| |||||||| |||||||| |||||| || |  ||||| | ||| |||||| ||||||| ||| |||||||    
T  9108006 ttcaaagagtaggaagagttcaagtcaaattttaaaatataaacgtggggtcttattgcggttgaattcttcaaagagaaaacaattaa 9108094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 20127222 - 20127146
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||| |||| |||||||  ||||  ||||||| |||||||||||||| ||||  |||||||||| ||||||||    
T  20127222 gggtgcggctatgatgcataagaaaatccttatgcaccctgcataaattcagaaatagttttggagtataactcaca 20127146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 36185725 - 36185777
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    ||||||||||||||||| |||||  ||||||||||||||||||| || |||||    
T  36185725 gcggttatggtgcataaggaaatccttatgcatcctgcataaatccagaaatg 36185777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 8036798 - 8036856
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    |||||||||||||||||| |||||  ||||||| ||||||||||| || ||||| ||||    
T  8036798 tgcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaaatggtttt 8036856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 377
Target Start/End: Original strand, 27437833 - 27437883
Alignment:
Q  327 ggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||||||||| |||| |||||||||||||| | |||||||||||| |||||    
T  27437833 ggttatggtgtataaggaaatttttatgcaccatgcataaattcagaaatg 27437883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 399
Target Start/End: Original strand, 14743567 - 14743616
Alignment:
Q  350 ttatgcatcctgcataaattcaaaaatgattttggagtacaactcacata 399  Q
    ||||||| |||||||||||  | ||||| |||||||||||||||||||||    
T  14743567 ttatgcaccctgcataaatctagaaatggttttggagtacaactcacata 14743616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 377
Target Start/End: Original strand, 49053227 - 49053276
Alignment:
Q  328 gttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||||||||||||| |||||| ||||||| || ||||||||||| |||||    
T  49053227 gttatggtgcataaggaaattcttatgcacccggcataaattcagaaatg 49053276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 368
Target Start/End: Original strand, 16276663 - 16276711
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaat 368  Q
    |||| |||||||||||||||||||||||  ||||||| | |||||||||    
T  16276663 tgggagcggttatggtgcataaagaaatccttatgcaccgtgcataaat 16276711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 47225758 - 47225802
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaat 368  Q
    ||||||||||||||||||| ||||  ||||||| |||||||||||    
T  47225758 tgcggttatggtgcataaacaaatccttatgcaccctgcataaat 47225802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 390
Target Start/End: Complemental strand, 49450587 - 49450547
Alignment:
Q  350 ttatgcatcctgcataaattcaaaaatgattttggagtaca 390  Q
    ||||||| |||||||||||||| |||||||||| |||||||    
T  49450587 ttatgcaccctgcataaattcagaaatgattttagagtaca 49450547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 34726846 - 34726769
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||||| |||||| ||||||| ||||||||||| || |||||||||||||||||||||||||    
T  34726846 tgggtgcggttatggtgcataaggaaattcttatgcaccctgcataaatccagaaatgattttggagtacaactcaca 34726769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 399
Target Start/End: Complemental strand, 24183646 - 24183568
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcacata 399  Q
    ||||||||||||||||||||| |||||  ||||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  24183646 gggtgcggttatggtgcataaggaaatccttatgcaccctgcataaattcaggaatgattttggagtacaactcacata 24183568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 37867148 - 37867225
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||||| |||||  |||| || |||||||||||||| |||||||||||||||||||||||||    
T  37867148 tgggtgcggttatggtgcataaggaaatccttatccaccctgcataaattcagaaatgattttggagtacaactcaca 37867225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 42364487 - 42364563
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||||  ||||  ||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  42364487 gggtgcggttatggtgcataagaaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 42364563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 395
Target Start/End: Complemental strand, 12449292 - 12449218
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactca 395  Q
    ||||||||||||||||||||| ||||| |||||||| | |||||||||| | ||||| |||||||||||||||||    
T  12449292 gggtgcggttatggtgcataaggaaatctttatgcaccttgcataaatttagaaatggttttggagtacaactca 12449218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 31711504 - 31711581
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||||| |||||  ||||| | ||||||||||| || ||||| |||||||||||||||||||    
T  31711504 tgggtgcggttatggtgcataaggaaatccttatgtaccctgcataaatccagaaatggttttggagtacaactcaca 31711581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 31783787 - 31783864
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||||| |||||  ||||||| ||||||||||| || ||||| ||||| |||||||||||||    
T  31783787 tgggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaaatggttttgaagtacaactcaca 31783864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 15253069 - 15252997
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaact 393  Q
    |||||||||||||||| |||| |||||  ||||||| |||||||||||||| ||||| |||||||||||||||    
T  15253069 gggtgcggttatggtgtataacgaaatccttatgcaccctgcataaattcagaaatggttttggagtacaact 15252997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 19246657 - 19246733
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||| |||||||||||||| |||||  ||||||| |||||||||||||| ||||  |||||||||||||||||||    
T  19246657 gggtgcagttatggtgcataaggaaatccttatgcaccctgcataaattcagaaattgttttggagtacaactcaca 19246733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 20194076 - 20194000
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||| ||||||| ||| |||||||  | ||||| |||||||||||||||||||    
T  20194076 gggtgcggttatggtgcataaggaaattcttatgcaccctacataaatctagaaatggttttggagtacaactcaca 20194000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 20661644 - 20661568
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||| |||||||||||||||| |||||  ||||||| ||||||||||| || ||||| |||||||||||||||||||    
T  20661644 gggtacggttatggtgcataaggaaatcattatgcaccctgcataaatccagaaatggttttggagtacaactcaca 20661568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 329 - 397
Target Start/End: Original strand, 16111516 - 16111584
Alignment:
Q  329 ttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||  ||||| ||||||| |||||||||||| ||||||  |||||||||||||||||||    
T  16111516 ttatggtgcataagaaaattcttatgcaccctgcataaatttaaaaatagttttggagtacaactcaca 16111584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 44915540 - 44915464
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||  ||||||| ||||||||||| || ||||  ||||||||||||| |||||    
T  44915540 gggtgcggttatggtgcataaggaaatgcttatgcaccctgcataaatccagaaattgttttggagtacaattcaca 44915464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 25575321 - 25575379
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    |||||||||||||||||| |||||  |||||||||||||||||||||| ||||| ||||    
T  25575321 tgcggttatggtgcataaggaaatccttatgcatcctgcataaattcagaaatggtttt 25575379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 22596554 - 22596477
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||||| |||||  ||||| | ||||||||||| || ||||  |||||| ||||||||||||    
T  22596554 tgggtgcggttatggtgcataaggaaatccttatgtaccctgcataaatccagaaattgttttggtgtacaactcaca 22596477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 381
Target Start/End: Original strand, 44915289 - 44915346
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattt 381  Q
    |||||||||||||||||| ||||| |||||||| |||||||||||| | |||||||||    
T  44915289 tgcggttatggtgcataaggaaatctttatgcagcctgcataaatttagaaatgattt 44915346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 324 - 371
Target Start/End: Complemental strand, 15150337 - 15150290
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattca 371  Q
    ||||||||||||||||||  ||||  ||||||||||||||||||||||    
T  15150337 tgcggttatggtgcataagaaaatccttatgcatcctgcataaattca 15150290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 368
Target Start/End: Complemental strand, 16111750 - 16111707
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaat 368  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||    
T  16111750 gcggttatggtgcataaggaaatctttatgcaccctgcataaat 16111707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 12449052 - 12449110
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    |||||||||||||||||| |||||  |||||||  ||||||||||||| ||||| ||||    
T  12449052 tgcggttatggtgcataaggaaatccttatgcacactgcataaattcagaaatggtttt 12449110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 23182274 - 23182213
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    |||||||||||||||| |||| |||||| ||||||| ||||||| |||  ||||||| ||||    
T  23182274 gggtgcggttatggtgaataaggaaattcttatgcaccctgcattaatctaaaaatggtttt 23182213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 23593531 - 23593470
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    |||||||||||||||| |||| |||||| ||||||| ||||||| |||  ||||||| ||||    
T  23593531 gggtgcggttatggtgaataaggaaattcttatgcaccctgcattaatctaaaaatggtttt 23593470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 20661394 - 20661438
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaat 368  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||    
T  20661394 tgcggttatggtgcataaggaaatccttatgcaccctgcataaat 20661438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 22588567 - 22588491
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||| |||||| ||| ||| |||||  ||||||| ||| ||||||| || ||||  |||||||||||||||||||    
T  22588567 gggtgcagttatgatgcgtaaggaaatccttatgcaccctacataaatccagaaatagttttggagtacaactcaca 22588491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 30777294 - 30777346
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||||||||||||||||| ||||  ||||||| ||||||||||| || |||||    
T  30777294 gcggttatggtgcataaaaaaatccttatgcaccctgcataaatccagaaatg 30777346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 37867400 - 37867348
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    ||||||| ||||||||| |||||  ||||||| |||||||||||||| |||||    
T  37867400 gcggttacggtgcataaggaaatccttatgcaccctgcataaattcagaaatg 37867348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 43742244 - 43742320
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||||| || |||||||||||||||||||||||||    
T  43742244 gggtgcggttatggtgcataaggaaatccttatgcatcctgcataaatccagaaatgattttggagtacaactcaca 43742320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 34227923 - 34227849
Alignment:
Q  323 gtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||| |||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  34227923 gtgcggttatggtgcataaggaaattcttatgcaccctgcataaattcataaatggttttggagtacaactcaca 34227849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 7843768 - 7843692
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||| ||||||||||  ||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  7843768 gggtgcggttatggtgtataaagaaatccttatgcaacctgcataaattcagaaatggttttggagtacaactcaca 7843692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 399
Target Start/End: Original strand, 44426593 - 44426671
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcacata 399  Q
    ||||||||||||||||||||| |||||  ||||||| ||||||||||| || ||||| |||||||||||||||||||||    
T  44426593 gggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaaatggttttggagtacaactcacata 44426671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 399
Target Start/End: Original strand, 31365266 - 31365344
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcacata 399  Q
    ||||||||||||||||||||| |||||  ||||||||| ||||||||| || ||||| ||||||||||||| |||||||    
T  31365266 gggtgcggttatggtgcataaggaaatccttatgcatcttgcataaatccataaatggttttggagtacaagtcacata 31365344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 26945763 - 26945687
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||  ||||||| ||||||||||| || ||||  |||||||||||||||||||    
T  26945763 gggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaaatagttttggagtacaactcaca 26945687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 46004584 - 46004508
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||  ||||||| |||||||||||||| ||||| ||||| |||||||| ||||    
T  46004584 gggtgcggttatggtgcataaggaaatccttatgcaccctgcataaattcagaaatggttttgaagtacaacacaca 46004508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 38837778 - 38837702
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||  ||||||| | ||||||||| |||||||| |||||||||| || |||||    
T  38837778 gggtgcggttatggtgcataaggaaatccttatgcaccttgcataaatccaaaaatggttttggagtataattcaca 38837702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 41066018 - 41065942
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||  ||||| | |||||||||||| | ||||| |||| ||||||||||||||    
T  41066018 gggtgcggttatggtgcataaggaaatccttatgtaccctgcataaatttagaaatggttttcgagtacaactcaca 41065942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 397
Target Start/End: Original strand, 5728704 - 5728751
Alignment:
Q  350 ttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  5728704 ttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 5728751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 384
Target Start/End: Complemental strand, 7845146 - 7845083
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttgg 384  Q
    ||||||||||||||||||||| |||||  ||||||| |||||||||||| | ||||| ||||||    
T  7845146 gggtgcggttatggtgcataaggaaatccttatgcaacctgcataaatttagaaatggttttgg 7845083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 395
Target Start/End: Original strand, 5728620 - 5728694
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactca 395  Q
    |||||||||||| |||||| | |||||  ||||||| | ||||||||| || ||||| |||||||||||||||||    
T  5728620 gggtgcggttatagtgcatgaggaaatccttatgcaccttgcataaatccagaaatggttttggagtacaactca 5728694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 369
Target Start/End: Original strand, 41065761 - 41065811
Alignment:
Q  319 gtgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaatt 369  Q
    ||||| |||||||||||||||||  |||| |||||||||||||||||||||    
T  41065761 gtgggcgcggttatggtgcataagaaaatctttatgcatcctgcataaatt 41065811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 6620614 - 6620690
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||  |||||||   ||||||||| || ||||| |||||| ||||||| ||||    
T  6620614 gggtgcggttatggtgcataacgaaatccttatgcactatgcataaatccataaatggttttggggtacaacacaca 6620690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 44426844 - 44426792
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||| || |||||    
T  44426844 gcggttatggtgcataaggaaatctttatgcaccctgcataaatccagaaatg 44426792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 397
Target Start/End: Complemental strand, 31192576 - 31192529
Alignment:
Q  350 ttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||| || ||||| ||||||||||||| |||||    
T  31192576 ttatgcatcctgcataaatccagaaatggttttggagtacaattcaca 31192529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 924495 - 924548
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||||||||||||||||| ||||| ||||| || | |||||||||||| |||||    
T  924495 tgcggttatggtgcataaggaaatctttatacaccttgcataaattcagaaatg 924548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 5728926 - 5728873
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    ||||||||||||||||||  ||||| ||||||| ||||||||||| || |||||    
T  5728926 tgcggttatggtgcataagaaaattcttatgcaccctgcataaatccagaaatg 5728873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 26945512 - 26945553
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcata 365  Q
    |||||||||||||||||| |||||| ||||||| ||||||||    
T  26945512 tgcggttatggtgcataaggaaattcttatgcaccctgcata 26945553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 32604719 - 32604772
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||| |||||||||||||  |||| |||||||| |||||||||||||| |||||    
T  32604719 tgcgtttatggtgcataagaaaatctttatgcaccctgcataaattcagaaatg 32604772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 34227675 - 34227732
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    ||||||||||||||||| |||||  ||||||| ||||||||||| || ||||| ||||    
T  34227675 gcggttatggtgcataaggaaatccttatgcaacctgcataaatccagaaatggtttt 34227732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 31940753 - 31940693
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattt 381  Q
    |||||||||||| ||| |||| ||||| | |||||| ||| |||||||||| |||||||||    
T  31940753 gggtgcggttatagtgtataaggaaatctatatgcaccctacataaattcagaaatgattt 31940693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 9813194 - 9813118
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| ||||| |||||||| |||||||||||||| |||||||||||||||| ||||||||    
T  9813194 gggtgcggttatggtgcataaggaaatctttatgcaccctgcataaattcagaaatgattttggagtataactcaca 9813118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 16475067 - 16474993
Alignment:
Q  323 gtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||| || ||||| |||||||||||||||||||    
T  16475067 gtgcggttatggtgcataaggaaatctttatgcatcctgcataaatccataaatggttttggagtacaactcaca 16474993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 12722987 - 12722911
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||||||| || ||||| |||||||||||||||||||    
T  12722987 gggtgcggttatggtgcataaggaaattcttatgcaccctgcataaatccagaaatggttttggagtacaactcaca 12722911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 38564010 - 38563934
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||||| ||||  ||||||||||||||| |||||| ||||| |||||||||||||||||||    
T  38564010 gggtgcggttatggtgcataaaaaaatccttatgcatcctgcatgaattcataaatggttttggagtacaactcaca 38563934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 31763155 - 31763081
Alignment:
Q  323 gtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||| |||||  ||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  31763155 gtgcggttatggtgcataaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 31763081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 21995664 - 21995741
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||||| |||||  ||||||| ||||||||||| || ||||| |||||||||||||||||||    
T  21995664 tgggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatccataaatggttttggagtacaactcaca 21995741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 399
Target Start/End: Complemental strand, 33883531 - 33883454
Alignment:
Q  322 ggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcacata 399  Q
    ||||| |||||||||||||| |||||  ||||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  33883531 ggtgcagttatggtgcataaggaaatcattatgcaccctgcataaatccaaaaatggttttggagtacaactcacata 33883454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 10374038 - 10374114
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||| |||||||| |||| ||||| |||||||| ||||||||||| || |||||||||||||||||||||||||    
T  10374038 gggtgcgtttatggtgtataaggaaatctttatgcaccctgcataaatccagaaatgattttggagtacaactcaca 10374114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 17109967 - 17109892
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||  ||||||| |||||||||| || ||||||||||||||||||||||||||    
T  17109967 gggtgcggttatggtgcataaggaaatccttatgcaccctgcataaa-tccaaaatgattttggagtacaactcaca 17109892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 36309413 - 36309489
Alignment:
Q  323 gtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcacata 399  Q
    ||||| ||||||||||||| |||||  ||||||| ||||||||||| || |||||||||||||||||||||||||||    
T  36309413 gtgcgattatggtgcataaggaaatccttatgcaccctgcataaatccagaaatgattttggagtacaactcacata 36309489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 36924236 - 36924312
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||  ||||||| ||||||||||| |||||||  |||||||||||||||||||    
T  36924236 gggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatccaaaaatagttttggagtacaactcaca 36924312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 397
Target Start/End: Complemental strand, 2124593 - 2124518
Alignment:
Q  322 ggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||| |||||| ||||||| ||||||||||| || ||||| |||||||||| ||||||||    
T  2124593 ggtgcggttatggtgcataaggaaattcttatgcaccctgcataaatccagaaatggttttggagtaaaactcaca 2124518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 320 - 395
Target Start/End: Original strand, 6806469 - 6806544
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactca 395  Q
    ||||||||||| ||||||||||||||||  ||||  |||||||||||||||| ||||| |||||||||||||||||    
T  6806469 tgggtgcggttgtggtgcataaagaaatccttatatatcctgcataaattcagaaatggttttggagtacaactca 6806544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 399
Target Start/End: Original strand, 43374442 - 43374520
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcacata 399  Q
    ||||||||||||||||||||| |||||  ||||| | ||||||||||| || ||||| |||||||||||||||||||||    
T  43374442 gggtgcggttatggtgcataaggaaatccttatgtaccctgcataaatccagaaatggttttggagtacaactcacata 43374520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 397
Target Start/End: Complemental strand, 55660485 - 55660415
Alignment:
Q  327 ggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||||| | |||||||||||| |||||||||||||| ||| ||||||    
T  55660485 ggttatggtgcataaagaaatctttatgcaccttgcataaattcagaaatgattttggagaacagctcaca 55660415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 8157339 - 8157262
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||| |||||||||||||| |||||  ||||||| |||||||||||  | |||||||||||||||||||||||||    
T  8157339 tgggtgcagttatggtgcataaggaaatccttatgcaccctgcataaatctagaaatgattttggagtacaactcaca 8157262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 8166127 - 8166051
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||| || ||||||| ||| |  |||||||||||||||||||||| ||||| |||||||||||||||||||    
T  8166127 gggtgcggttttgatgcataaggaactccttatgcatcctgcataaattcagaaatggttttggagtacaactcaca 8166051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 54895399 - 54895475
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||||  ||||  ||||||| ||||||||||| || ||||| |||||||||||||||||||    
T  54895399 gggtgcggttatggtgcataagaaaatccttatgcaccctgcataaatccagaaatggttttggagtacaactcaca 54895475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 1492669 - 1492743
Alignment:
Q  323 gtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||| |||||  ||||||| |||||||||||  | ||||| |||||||||||||||||||    
T  1492669 gtgcggttatggtgcataaggaaatccttatgcaccctgcataaatctagaaatggttttggagtacaactcaca 1492743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 37059964 - 37059888
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||| ||||||| |||||  ||||  ||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  37059964 gggtgcgattatggtacataagaaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 37059888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 396
Target Start/End: Original strand, 53865059 - 53865134
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcac 396  Q
    ||||||||||||| ||||||| ||||| ||||||||  ||||||||||  | ||||| ||||||||||||||||||    
T  53865059 gggtgcggttatgatgcataaggaaatctttatgcactctgcataaatctagaaatggttttggagtacaactcac 53865134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 399
Target Start/End: Complemental strand, 30779755 - 30779677
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcacata 399  Q
    ||||||||||||| |  |||| |||||  |||||||||||| ||||||||| ||||| ||||||| |||||||||||||    
T  30779755 gggtgcggttatgatatataaggaaatccttatgcatcctgtataaattcataaatggttttggaatacaactcacata 30779677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 9967920 - 9967843
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||||  |||||||||||||  ||| |||| | || ||||| ||||||||||||| |||||    
T  9967920 tgggtgcggttatggtgcataagaaaatttttatgcactctgtataagtccagaaatggttttggagtacaattcaca 9967843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 31762928 - 31762985
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    ||||||||||||||||| |||||  |||||||||||||||||||||| ||||| ||||    
T  31762928 gcggttatggtgcataaggaaatccttatgcatcctgcataaattcagaaatggtttt 31762985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 2124343 - 2124395
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    ||||||||||||||||| |||||  ||||||| ||||||||||||||||||||    
T  2124343 gcggttatggtgcataaggaaatccttatgcaccctgcataaattcaaaaatg 2124395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 25715776 - 25715700
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||||  ||||  ||||||| ||||||||||| || ||||| ||||| | |||||||||||    
T  25715776 gggtgcggttatggtgcataagaaaatccttatgcaccctgcataaatccagaaatggttttgaaatacaactcaca 25715700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 368
Target Start/End: Original strand, 51836326 - 51836369
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaat 368  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  51836326 gcggttatggtgcataaggaaatttttatgcatcgtgcataaat 51836369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 377
Target Start/End: Complemental strand, 54895635 - 54895576
Alignment:
Q  318 tgtgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||||||| ||||||||||||||| |||||  ||||||| ||||||||||| ||||||||    
T  54895635 tgtgggtgtggttatggtgcataaggaaatccttatgcaccctgcataaatccaaaaatg 54895576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 395
Target Start/End: Original strand, 6768414 - 6768472
Alignment:
Q  337 cataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactca 395  Q
    ||||| |||||| ||||||| |||||||||||| | ||||| |||||||||||||||||    
T  6768414 cataaggaaattcttatgcaccctgcataaatttagaaatggttttggagtacaactca 6768472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 36924490 - 36924432
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||| || ||||| ||||    
T  36924490 tgcggttatggtgcataaggaaatctttatgtatcctgcataaatccataaatggtttt 36924432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 397
Target Start/End: Complemental strand, 41025274 - 41025236
Alignment:
Q  359 ctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  41025274 ctgcataaattcagaaatgattttggagtacaactcaca 41025236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 43375567 - 43375509
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    |||||||||||||||||  |||||  ||||||| |||||||||||||| ||||||||||    
T  43375567 tgcggttatggtgcatacggaaatccttatgcaccctgcataaattcagaaatgatttt 43375509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 382
Target Start/End: Original strand, 562770 - 562831
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    ||||||||||||||||||||| |||||   |||||| |||||||||||||| ||||| ||||    
T  562770 gggtgcggttatggtgcataaggaaatccctatgcaccctgcataaattcagaaatggtttt 562831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 27873043 - 27872972
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||||| |||     |||||| |||||||||||||| ||||| ||||| |||||||||||||    
T  27873043 tgggtgcggttatggtgcataa-gaa-----tatgcaccctgcataaattcagaaatggttttgaagtacaactcaca 27872972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 6841819 - 6841871
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaat 376  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||||| ||||    
T  6841819 tgcggttatggtgcataaggaaatccttatgcaccctgcataaattcagaaat 6841871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 393
Target Start/End: Complemental strand, 6842037 - 6841997
Alignment:
Q  353 tgcatcctgcataaattcaaaaatgattttggagtacaact 393  Q
    |||| |||||||||||||||||||| |||||||||||||||    
T  6842037 tgcaccctgcataaattcaaaaatggttttggagtacaact 6841997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 33871327 - 33871255
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaact 393  Q
    ||||||||||||| ||||||| |||||  ||||||| |||||||| ||  ||||||  |||||||||||||||    
T  33871327 gggtgcggttatgatgcataaggaaatccttatgcaccctgcatagatctaaaaatagttttggagtacaact 33871255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 368
Target Start/End: Complemental strand, 6768642 - 6768599
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaat 368  Q
    |||||||| |||||||| ||||| ||||||||||||||||||||    
T  6768642 gcggttatagtgcataaggaaatctttatgcatcctgcataaat 6768599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 52325101 - 52325169
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaa 391  Q
    ||||||||||||||||||  |||||||  ||| ||||| ||||||||| || ||||||||||| |||||||    
T  52325101 gggtgcggttatggtgca--aagaaatccttacgcatcttgcataaatccagaaatgattttgaagtacaa 52325169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 377
Target Start/End: Original strand, 25715644 - 25715694
Alignment:
Q  327 ggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    ||||||||||||||| |||||  ||||||| ||||||||||| ||||||||    
T  25715644 ggttatggtgcataaggaaatccttatgcaccctgcataaatccaaaaatg 25715694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 33883292 - 33883350
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    |||||||||||||||||| |||||  ||||||| |||| ||||||||| ||||| ||||    
T  33883292 tgcggttatggtgcataaggaaatccttatgcaccctgtataaattcagaaatggtttt 33883350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 377
Target Start/End: Original strand, 41025054 - 41025112
Alignment:
Q  319 gtgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    ||||| ||||||||||| ||||| |||||  ||||||| |||||||||||||| |||||    
T  41025054 gtgggcgcggttatggtacataatgaaatccttatgcaccctgcataaattcagaaatg 41025112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 53526498 - 53526452
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattc 370  Q
    |||||||||||||||||| |||||| ||||| | |||||||||||||    
T  53526498 tgcggttatggtgcataaggaaattcttatgtaccctgcataaattc 53526452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 8165760 - 8165813
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||||||||||||||||| |||||  ||||||| ||||||||||| || |||||    
T  8165760 tgcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaaatg 8165813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 395
Target Start/End: Complemental strand, 42788715 - 42788650
Alignment:
Q  330 tatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactca 395  Q
    |||||||||||| |||||  |||||||||||||||||||  | ||||  |||||| ||||||||||    
T  42788715 tatggtgcataaggaaatccttatgcatcctgcataaatcaagaaatagttttggtgtacaactca 42788650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 377
Target Start/End: Complemental strand, 53865293 - 53865236
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||| ||||||||||||||||| |||||  ||||||| ||||||||||| || |||||    
T  53865293 tgggcgcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaaatg 53865236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 47567891 - 47567967
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||| ||||  ||||  ||||||| | ||||||||| || ||||  ||||||||||||| |||||    
T  47567891 gggtgcggttatggtgaataagaaaatccttatgcaccttgcataaatccagaaatagttttggagtacaattcaca 47567967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 10589003 - 10588926
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||||| |||||  ||||||| |||||||||||||||||||  |||||||||||||||||||    
T  10589003 tgggtgcggttatggtgcataaggaaatccttatgcaccctgcataaattcaaaaatagttttggagtacaactcaca 10588926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 395
Target Start/End: Original strand, 19284366 - 19284440
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactca 395  Q
    ||||||||||||||||||||| |||||  ||||||| |||||||||||  ||||||| |||||||||||||||||    
T  19284366 gggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatctaaaaatggttttggagtacaactca 19284440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 320 - 393
Target Start/End: Complemental strand, 25119520 - 25119447
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaact 393  Q
    |||||||||||||||||||||| |||||  ||||||| ||||||||||| || ||||| |||||||||||||||    
T  25119520 tgggtgcggttatggtgcataaggaaatccttatgcagcctgcataaatccagaaatggttttggagtacaact 25119447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 7371147 - 7371071
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||||  |||| |||||||| ||||| ||||| || ||||| |||||||||||||||||||    
T  7371147 gggtgcggttatggtgcataagaaaatctttatgcaccctgcttaaatccagaaatggttttggagtacaactcaca 7371071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 21385038 - 21384962
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||  ||||||| |||||||||||  | ||||| |||||||||||||||||||    
T  21385038 gggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatctagaaatggttttggagtacaactcaca 21384962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 22857726 - 22857650
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||||  ||||  ||||||| ||||||||||| || ||||| |||||||||||||||||||    
T  22857726 gggtgcggttatggtgcataagaaaatccttatgcaccctgcataaatccagaaatggttttggagtacaactcaca 22857650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 395
Target Start/End: Complemental strand, 20522891 - 20522823
Alignment:
Q  327 ggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactca 395  Q
    ||||||||||||||| |||||  ||||||| ||| |||||||||| ||||| |||||||||||||||||    
T  20522891 ggttatggtgcataaggaaatccttatgcaccctacataaattcagaaatggttttggagtacaactca 20522823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 390
Target Start/End: Complemental strand, 26713223 - 26713154
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtaca 390  Q
    |||||||||||||||||||||| |||||  ||||||| |||  ||||||||| ||||||||||||||||||    
T  26713223 tgggtgcggttatggtgcataa-gaaatccttatgcaccctatataaattcagaaatgattttggagtaca 26713154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 21384787 - 21384840
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||||||||||||||||| |||||| ||||||||||||||||||| || |||||    
T  21384787 tgcggttatggtgcataaggaaattcttatgcatcctgcataaatccagaaatg 21384840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 25119104 - 25119157
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||||||||||||||||| |||||| ||||||| |||||||||||||| |||||    
T  25119104 tgcggttatggtgcataaggaaattcttatgcaccctgcataaattcagaaatg 25119157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 11140504 - 11140429
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||| ||||| |||| |||||  ||||||| ||| |||||||||| ||||| |||||||||||||||||||    
T  11140504 gggtgcggttttggtgtataaggaaatccttatgca-cctacataaattcagaaatggttttggagtacaactcaca 11140429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 377
Target Start/End: Original strand, 20522670 - 20522720
Alignment:
Q  327 ggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||| |||||    
T  20522670 ggttatggtgcataaggaaatatttatgcaccctgcataaattcagaaatg 20522720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 22857486 - 22857544
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||||| ||||| ||||    
T  22857486 tgcggttatggtgcataaggaaatccttatgcaccctgcataaattcagaaatggtttt 22857544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 19281282 - 19281334
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    ||||||||||||||||| |||||  || |||| |||||||||||||| |||||    
T  19281282 gcggttatggtgcataaggaaatccttgtgcaccctgcataaattcagaaatg 19281334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 7286748 - 7286824
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||| |||| ||||| |||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  7286748 gggtgcggttatggtgtataaggaaatctttatgcaccctgcataaattcagaaatgattttggagtacaacacaca 7286824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 399
Target Start/End: Complemental strand, 39861829 - 39861751
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcacata 399  Q
    ||||||||||||||||||||| |||||  ||||||| ||||||||||| || ||||| |||||||||||||||||||||    
T  39861829 gggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaaatggttttggagtacaactcacata 39861751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 39086511 - 39086588
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||||  ||||  ||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  39086511 tgggtgcggttatggtgcataagaaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 39086588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 5411805 - 5411729
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||| ||||||| ||| |||||||||| |||||||||||| ||| ||||||||    
T  5411805 gggtgcggttatggtgcataaggaaattcttatgcacccttcataaattcagaaatgattttggggtataactcaca 5411729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 23155520 - 23155596
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||| ||||||||||||||| |||||  ||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  23155520 gggtgtggttatggtgcataaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 23155596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 42746516 - 42746592
Alignment:
Q  323 gtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcacata 399  Q
    ||||||||||||||||||| |||||  ||||| ||||||||||||| || ||||| |||||||||||||||||||||    
T  42746516 gtgcggttatggtgcataaggaaatccttatgaatcctgcataaatccagaaatggttttggagtacaactcacata 42746592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 399
Target Start/End: Complemental strand, 20134448 - 20134370
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcacata 399  Q
    ||||||||||||||||||||| |||||  |||||||  |||||||||| || ||||| |||||||||||||||||||||    
T  20134448 gggtgcggttatggtgcataaggaaatccttatgcactctgcataaatccagaaatggttttggagtacaactcacata 20134370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 3340584 - 3340657
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaact 393  Q
    |||||||||||||||||||||| |||||  ||||||| |||||||||||| | ||||| |||||||||||||||    
T  3340584 tgggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatttagaaatggttttggagtacaact 3340657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 399
Target Start/End: Original strand, 15559044 - 15559122
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcacata 399  Q
    ||||||||||||||||||||| |||||  ||||||| | |||||||||||| ||||||||||| | |||||| ||||||    
T  15559044 gggtgcggttatggtgcataaggaaatccttatgcaccatgcataaattcagaaatgattttgaaatacaacccacata 15559122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 397
Target Start/End: Original strand, 36864060 - 36864138
Alignment:
Q  319 gtgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||||| |||||| |||||||  ||||||||||  | ||||| ||||||| |||||||||||    
T  36864060 gtgggtgcggttatggtgcataaggaaattcttatgcacactgcataaatctagaaatggttttggaatacaactcaca 36864138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 11661032 - 11660955
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||| |||||||||||||||| |||||  ||||||| ||||||||||| || ||||| ||||||| |||||||||||    
T  11661032 tgggttcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaaatggttttggaatacaactcaca 11660955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 399
Target Start/End: Complemental strand, 20696378 - 20696298
Alignment:
Q  319 gtgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcacata 399  Q
    ||||||||||||||||||||||| |||||  |||| || ||||||||||| || |||||  |||||||||||| |||||||    
T  20696378 gtgggtgcggttatggtgcataaggaaatccttattcaccctgcataaatccataaatggatttggagtacaattcacata 20696298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 35662066 - 35662138
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||| |||||  ||||||| ||| ||||||| || ||||| |||||||||||||||||||    
T  35662066 gcggttatggtgcataaggaaatccttatgcaccctacataaatccagaaatggttttggagtacaactcaca 35662138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 39166389 - 39166313
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||||  ||||  ||||||| |||||||||||| | ||||| |||||||||| ||||||||    
T  39166389 gggtgcggttatggtgcataagaaaatccttatgcaccctgcataaatttagaaatggttttggagtataactcaca 39166313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 22672046 - 22671985
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    |||| |||||||||||||||| |||||  ||||||||||||||||||| || ||||||||||    
T  22672046 gggtacggttatggtgcataaggaaatccttatgcatcctgcataaatccagaaatgatttt 22671985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 11376622 - 11376554
Alignment:
Q  328 gttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||| ||| |  |||||||  ||||||||||||| |||||||||||||| ||||||||||    
T  11376622 gttatggtgcataaggaa-tccttatgcacactgcataaattcagaaatgattttggagaacaactcaca 11376554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 377
Target Start/End: Original strand, 16552242 - 16552298
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    ||||||||||||||||||||| |||||   |||||| |||||||||||||| |||||    
T  16552242 gggtgcggttatggtgcataaggaaatccgtatgcaccctgcataaattcagaaatg 16552298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 382
Target Start/End: Original strand, 703732 - 703786
Alignment:
Q  328 gttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    |||||||||||||| |||||  |||||||||||||||||||| | ||||| ||||    
T  703732 gttatggtgcataaggaaatccttatgcatcctgcataaatttagaaatggtttt 703786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 11660791 - 11660849
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    |||||||||||||||||| |||||  ||||||| ||| |||||||||| ||||| ||||    
T  11660791 tgcggttatggtgcataaggaaatccttatgcaccctacataaattcagaaatggtttt 11660849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 381
Target Start/End: Original strand, 39166152 - 39166206
Alignment:
Q  327 ggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattt 381  Q
    ||||| ||||||||| |||||| ||||||| ||||||||||| || |||||||||    
T  39166152 ggttacggtgcataaggaaattcttatgcaccctgcataaatccagaaatgattt 39166206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 20134197 - 20134250
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||||||||||||||||| |||||  ||||||| ||||||||||| || |||||    
T  20134197 tgcggttatggtgcataaggaaatccttatgcagcctgcataaatccagaaatg 20134250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 397
Target Start/End: Complemental strand, 33857552 - 33857516
Alignment:
Q  361 gcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  33857552 gcataaattcagaaatgattttggagtacaattcaca 33857516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 35662278 - 35662226
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    ||||||||||||||||| |||||  ||||||| ||||||||||| || |||||    
T  35662278 gcggttatggtgcataaggaaatacttatgcaccctgcataaatccataaatg 35662226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 381
Target Start/End: Complemental strand, 36864313 - 36864257
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattt 381  Q
    |||||||||||| |||| |||||  |||||||  ||||||||||||| |||||||||    
T  36864313 gcggttatggtgtataaggaaatccttatgcactctgcataaattcagaaatgattt 36864257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 42746888 - 42746836
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    ||||||||| || |||| ||||| |||||||| |||||||||||||| |||||    
T  42746888 gcggttatgatgtataaggaaatctttatgcaccctgcataaattcagaaatg 42746836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 12070659 - 12070583
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||||||||  ||||| |||||||||||||||||||    
T  12070659 gggtgcggttatggtgcataaggaaattcttatgcaccctgcataaattccgaaatggttttggagtacaactcaca 12070583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 31763770 - 31763846
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||  |||| || |||||||||||||||||||| |||||||||||||||||||    
T  31763770 gggtgcggttatggtgcataaggaaatccttatacaccctgcataaattcaaaaatggttttggagtacaactcaca 31763846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 32595099 - 32595175
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||||||| || ||||| |||||||||||||||||||    
T  32595099 gggtgcggttatggtgcataaggaaattcttatgcaccctgcataaatccagaaatggttttggagtacaactcaca 32595175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 397
Target Start/End: Complemental strand, 14229407 - 14229334
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||| || ||||| |||||||||||||||||||    
T  14229407 tgcggttatggtgcataaggaaatctttatgcaccctgcataaatccagaaatggttttggagtacaactcaca 14229334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 17893322 - 17893246
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||  ||||||| |||||||||||||| ||||  |||||||||||||||||||    
T  17893322 gggtgcggttatggtgcataaggaaatccttatgcaccctgcataaattcagaaatagttttggagtacaactcaca 17893246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 11354560 - 11354484
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||||||||||  ||||  |||||||  ||||||||||||| ||||| |||||||||||||||||||    
T  11354560 gggtgcggttatggtgcataagcaaatccttatgcactctgcataaattcataaatggttttggagtacaactcaca 11354484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 33156987 - 33157062
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||  ||||||| ||||||||||| || ||||| |||||||||||||||||||    
T  33156987 gggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaaatg-ttttggagtacaactcaca 33157062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 9041100 - 9041030
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaa 391  Q
    ||||||||||||||||||||| |||||  ||||||| ||||||||| |||| ||||| |||||||||||||    
T  9041100 gggtgcggttatggtgcataaggaaatccttatgcaccctgcataatttcagaaatggttttggagtacaa 9041030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 42134178 - 42134104
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcacata 399  Q
    ||||||||||||||||| |||||  ||||||| ||||||||||| || ||||| |||| ||||||||||||||||    
T  42134178 gcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaaatggttttagagtacaactcacata 42134104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 47693915 - 47693839
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||| ||||||| ||||| |||||||| |||  |||||| || ||||| |||||||||||||||||||    
T  47693915 gggtgcggttatgatgcataaggaaatctttatgcaccctttataaatccagaaatggttttggagtacaactcaca 47693839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 45849357 - 45849286
Alignment:
Q  322 ggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaact 393  Q
    |||||| ||||||||||||| |||||| ||||||| ||||||||||| || ||||  |||||||||||||||    
T  45849357 ggtgcgattatggtgcataaggaaattcttatgcaccctgcataaatccataaatagttttggagtacaact 45849286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 14229170 - 14229228
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||||||||||| ||||    
T  14229170 tgcggttatggtgcataaggaaatccttatgcaccctgcataaattcaaaaatggtttt 14229228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 1395166 - 1395235
Alignment:
Q  328 gttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||||| |||||  || |||| ||||| ||||| || |||||||||||||||||||||||||    
T  1395166 gttatggtgcataaggaaatccttttgcaccctgcttaaatccataaatgattttggagtacaactcaca 1395235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 10974631 - 10974684
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||||||||||||||||| |||||  ||||||| ||||||||||||||||||||    
T  10974631 tgcggttatggtgcataaggaaatccttatgcaccctgcataaattcaaaaatg 10974684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 9628644 - 9628572
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||| |||||  ||||||| ||||||||||| ||  |||  |||||||||||||||||||    
T  9628644 gcggttatggtgcataaggaaatccttatgcaccctgcataaatccagtaattgttttggagtacaactcaca 9628572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 14389839 - 14389915
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||| | |||||||| |||||  ||||||| ||||||||||| || ||||| |||||||||| ||||||||    
T  14389839 gggtgcggttgtagtgcataaggaaatccttatgcaccctgcataaatccagaaatggttttggagtataactcaca 14389915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 397
Target Start/End: Complemental strand, 51904930 - 51904855
Alignment:
Q  322 ggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||| |||||| ||||||||| ||||| |||| ||||||||||||||  ||||||  ||||||||||||| |||||    
T  51904930 ggtgtggttatcgtgcataaataaattcttatacatcctgcataaatctaaaaatagttttggagtacaattcaca 51904855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 397
Target Start/End: Original strand, 18928783 - 18928849
Alignment:
Q  331 atggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||| |||||  ||||||| ||||||||||| || || || |||||||||||||||||||    
T  18928783 atggtgcataaggaaatccttatgcaccctgcataaatccagaattggttttggagtacaactcaca 18928849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 397
Target Start/End: Original strand, 6708343 - 6708388
Alignment:
Q  352 atgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||| ||||||||||| || |||||||||||||||||||||||||    
T  6708343 atgcaccctgcataaatgcagaaatgattttggagtacaactcaca 6708388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 18929000 - 18928948
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||| || |||||    
T  18929000 gcggttatggtgcataaggaaatctttatgcaccctgcataaatccagaaatg 18928948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 42133942 - 42133986
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaat 368  Q
    |||||||||||||||||| |||||  |||||||||||||||||||    
T  42133942 tgcggttatggtgcataaggaaatccttatgcatcctgcataaat 42133986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 397
Target Start/End: Complemental strand, 46590800 - 46590732
Alignment:
Q  329 ttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||| ||||| |||||||| |||| ||||||  | ||||| ||||| |||||||||||||    
T  46590800 ttatggtgcataaggaaatctttatgcaccctgtataaatcgataaatggttttgaagtacaactcaca 46590732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 1395397 - 1395339
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    |||||||||||||||||| |||||  ||||||| | |||||||||||| ||||| ||||    
T  1395397 tgcggttatggtgcataaggaaatccttatgcaccatgcataaattcagaaatggtttt 1395339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 370
Target Start/End: Complemental strand, 11422620 - 11422570
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattc 370  Q
    |||| ||||||||||||||||| |||||  ||||||||| |||||||||||    
T  11422620 tgggagcggttatggtgcataaggaaatccttatgcatcgtgcataaattc 11422570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 397
Target Start/End: Original strand, 29945250 - 29945288
Alignment:
Q  359 ctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  29945250 ctgcataaattcagaaatggttttggagtacaactcaca 29945288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 31764019 - 31763961
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    |||||||||||||||||| |||||  ||||||| ||| ||||||| || ||||||||||    
T  31764019 tgcggttatggtgcataaggaaatccttatgcaccctacataaatccagaaatgatttt 31763961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 382
Target Start/End: Original strand, 47693666 - 47693722
Alignment:
Q  328 gttatggtgcataaagaaat--ttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    |||||||||||||| |||||  || |||||| |||||||||||||||||||| ||||    
T  47693666 gttatggtgcataaggaaatccttatatgcaccctgcataaattcaaaaatggtttt 47693722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 17811328 - 17811276
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    ||||||||||||||||| |||||  ||||||| |||| ||||||||| |||||    
T  17811328 gcggttatggtgcataaggaaatccttatgcaccctgtataaattcagaaatg 17811276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 49992513 - 49992585
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaact 393  Q
    ||||||||||||||||||||| |||||  |||||||  || |||||||  | ||||| ||||||| |||||||    
T  49992513 gggtgcggttatggtgcataaggaaatccttatgcacacttcataaatctagaaatggttttggaatacaact 49992585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 6783428 - 6783504
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||||||||||| | ||||| || ||||||||| | |||||||||||||||||||||||||    
T  6783428 tgggtgcggttatggtgcataaagaaattctcatgca-ccagcataaatttataaatgattttggagtacaactcaca 6783504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 10586110 - 10586034
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||| ||||||| |||||  ||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  10586110 gggtgcggttatgatgcataaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 10586034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 34343244 - 34343320
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| ||||| |||||||| ||| |||||||||| ||||| ||||| |||||||||||||    
T  34343244 gggtgcggttatggtgcataaggaaatctttatgcaccctacataaattcagaaatggttttgaagtacaactcaca 34343320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 320 - 399
Target Start/End: Complemental strand, 8439238 - 8439159
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcacata 399  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||||| || ||||| ||||  |||||||||||||||    
T  8439238 tgggtgcggttatggtgcataaggaaatctttatgcatcctccataaatccataaatggttttcaagtacaactcacata 8439159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 320 - 399
Target Start/End: Original strand, 18757180 - 18757259
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcacata 399  Q
    |||||||| || ||||| ||||||||||| |||||||||||||||||||| | | ||| |||||||||||||||||||||    
T  18757180 tgggtgcgattgtggtgtataaagaaattcttatgcatcctgcataaatttagagatggttttggagtacaactcacata 18757259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 185876 - 185952
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||| ||||||||||||||| |||||  |||||||  ||||||||||||| ||||| |||||||||||||||||||    
T  185876 gggtgtggttatggtgcataaggaaatccttatgcactctgcataaattcagaaatggttttggagtacaactcaca 185952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 17656613 - 17656689
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||  |||||||  |||||||||| || ||||| |||||||||||||||||||    
T  17656613 gggtgcggttatggtgcataaggaaatccttatgcactctgcataaatccagaaatggttttggagtacaactcaca 17656689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 17792941 - 17792865
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||  ||||||| ||||||||||| || ||| || ||||||||||||||||||    
T  17792941 gggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaaacgaatttggagtacaactcaca 17792865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 389
Target Start/End: Complemental strand, 23941045 - 23940977
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtac 389  Q
    ||||||||||||||||||||||||||| || ||||||||||||| ||| ||| |||| |||||||||||    
T  23941045 gggtgcggttatggtgcataaagaaatcttcatgcatcctgcattaatccaagaatggttttggagtac 23940977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 15808880 - 15808952
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaact 393  Q
    |||||||||||||||||||||  ||||  ||||||| ||||||||||| || ||||| |||||||||||||||    
T  15808880 gggtgcggttatggtgcataagaaaatccttatgcaccctgcataaatccagaaatggttttggagtacaact 15808952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 34343497 - 34343444
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||||||||||||||||| |||||| ||||||| |||||||||||||| |||||    
T  34343497 tgcggttatggtgcataaggaaattattatgcaccctgcataaattcagaaatg 34343444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 24473293 - 24473218
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||| |||||||||||||||| |||||  ||||||| |||| |||||||| | |||| |||||||||||||||||||    
T  24473293 gggtacggttatggtgcataaggaaatccttatgcaccctgtataaattc-agaatggttttggagtacaactcaca 24473218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 381
Target Start/End: Original strand, 204932 - 204987
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattt 381  Q
    |||||||||||||||||  |||||| ||||||| |||||||||||||| |||||||||    
T  204932 tgcggttatggtgcata--gaaattcttatgcaccctgcataaattcagaaatgattt 204987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 381
Target Start/End: Original strand, 319769 - 319824
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattt 381  Q
    |||||||||||||||||  |||||| ||||||| |||||||||||||| |||||||||    
T  319769 tgcggttatggtgcata--gaaattcttatgcaccctgcataaattcagaaatgattt 319824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 399
Target Start/End: Complemental strand, 205089 - 205018
Alignment:
Q  327 ggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcacata 399  Q
    ||||||| ||||||| |||||| ||| ||| ||| |||||||||| ||||||||||| |||| ||||||||||    
T  205089 ggttatgatgcataaggaaattcttacgcaccctccataaattcacaaatgattttgaagta-aactcacata 205018  T

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Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 399
Target Start/End: Complemental strand, 319926 - 319855
Alignment:
Q  327 ggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcacata 399  Q
    ||||||| ||||||| |||||| ||| ||| ||| |||||||||| ||||||||||| |||| ||||||||||    
T  319926 ggttatgatgcataaggaaattcttacgcaccctccataaattcacaaatgattttgaagta-aactcacata 319855  T

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Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 384
Target Start/End: Original strand, 23567480 - 23567544
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttgg 384  Q
    |||||||||||||||||||||| |||||  |||||||  |||||||||| || ||||| ||||||    
T  23567480 tgggtgcggttatggtgcataaggaaatccttatgcactctgcataaatccagaaatggttttgg 23567544  T

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Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 35448229 - 35448305
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||| ||||||| |||||  || |||| ||| ||||||| || ||||| || ||||||||||||||||    
T  35448229 gggtgcggttatgatgcataaggaaatcattttgcaacctccataaatccagaaatggttatggagtacaactcaca 35448305  T

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Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 368
Target Start/End: Complemental strand, 18757373 - 18757330
Alignment:
Q  325 gcggttatggtgcataaagaaatttttatgcatcctgcataaat 368  Q
    |||||||||||||||||||||||  ||||||| |||||||||||    
T  18757373 gcggttatggtgcataaagaaatccttatgcaccctgcataaat 18757330  T

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Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 377
Target Start/End: Complemental strand, 23567687 - 23567636
Alignment:
Q  326 cggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||||||||||||||| |||||| ||||||| ||||||||||| || |||||    
T  23567687 cggttatggtgcataaggaaattcttatgcaccctgcataaatccagaaatg 23567636  T

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Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 395
Target Start/End: Original strand, 35116768 - 35116811
Alignment:
Q  352 atgcatcctgcataaattcaaaaatgattttggagtacaactca 395  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||    
T  35116768 atgcatcctgcataaattcagaaatggttttgaagtacaactca 35116811  T

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Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 397
Target Start/End: Complemental strand, 32644266 - 32644220
Alignment:
Q  351 tatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||| ||||||||||| || ||||| |||||||||||||||||||    
T  32644266 tatgcaccctgcataaatccagaaatggttttggagtacaactcaca 32644220  T

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Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 377
Target Start/End: Complemental strand, 35448665 - 35448603
Alignment:
Q  315 atatgtgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||| ||| |||||||||||||||||| |||||  ||||||| ||||||||||| || |||||    
T  35448665 atatttggctgcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaaatg 35448603  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 15809886 - 15809833
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||||||||||||||||| |||||  ||||||| ||| |||||||||| |||||    
T  15809886 tgcggttatggtgcataaggaaatccttatgcaccctccataaattcagaaatg 15809833  T

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Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 377
Target Start/End: Original strand, 27506708 - 27506757
Alignment:
Q  328 gttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||||||||||||| |||||  ||||||| ||||||||||| ||||||||    
T  27506708 gttatggtgcataaggaaatccttatgcaccctgcataaatccaaaaatg 27506757  T

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Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 397
Target Start/End: Complemental strand, 27506916 - 27506879
Alignment:
Q  360 tgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  27506916 tgcataaattcataaatggttttggagtacaactcaca 27506879  T

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Target: scaffold0129 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 20169 - 20093
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||  ||||||| |||||||||||||| ||||| | |||||||||||||||||    
T  20169 gggtgcggttatggtgcataaggaaatccttatgcaccctgcataaattcagaaatggtgttggagtacaactcaca 20093  T

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Target: scaffold0126 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 37627 - 37704
Alignment:
Q  320 tgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||| |||||||| |||||  ||||||| ||| ||||||| || ||||| |||||||||||||||||||    
T  37627 tgggtgcggttattgtgcataaggaaatccttatgcaccctacataaatccataaatggttttggagtacaactcaca 37704  T

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Target: scaffold0102 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 3)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 33611 - 33687
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||| |||||  ||||||| |||||||||||  | ||||| ||||||| |||||||||||    
T  33611 gggtgcggttatggtgcataaggaaatccttatgcaccctgcataaatctagaaatggttttggaatacaactcaca 33687  T

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Target: scaffold0102; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 33862 - 33810
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||    
T  33862 tgcggttatggtgcataaggaaattcttatgca-cctgcataaatccaaaaatg 33810  T

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Target: scaffold0102; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 15950 - 15902
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaatt 369  Q
    ||||||||||||||| ||||| |||||| |||||||  |||||||||||    
T  15950 gggtgcggttatggtacataaggaaattcttatgcactctgcataaatt 15902  T

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Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 80919 - 80840
Alignment:
Q  318 tgtgggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    ||||||||||||||||||||||||  ||||  ||||||| |||||| ||||||| ||||| |||| ||||| ||||||||    
T  80919 tgtgggtgcggttatggtgcataagaaaatccttatgcaccctgcaaaaattcagaaatggtttttgagtataactcaca 80840  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 329 - 391
Target Start/End: Original strand, 51908 - 51970
Alignment:
Q  329 ttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaa 391  Q
    ||||||||||||| |||||  ||||||| ||||||||||| || |||||||||||||||||||    
T  51908 ttatggtgcataaggaaatccttatgcaccctgcataaatccagaaatgattttggagtacaa 51970  T

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Target: scaffold0117 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 393
Target Start/End: Complemental strand, 17985 - 17917
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaact 393  Q
    |||||||||||||||||| |||||  |||  || ||||||||||||||||||||||||||  ||||||||    
T  17985 tgcggttatggtgcataaggaaatccttaa-caccctgcataaattcaaaaatgattttgaggtacaact 17917  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 95994 - 96070
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgattttggagtacaactcaca 397  Q
    |||||| ||||||||||||||  ||||  ||||||| |||||||||||  | ||||| ||||||||||||| |||||    
T  95994 gggtgcagttatggtgcataagaaaatccttatgcaccctgcataaatctagaaatggttttggagtacaaatcaca 96070  T

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Target: scaffold0249 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 23784 - 23706
Alignment:
Q  321 gggtgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg--attttggagtacaactcaca 397  Q
    ||||||| ||||||||||||| |||||  ||||||| |||||||||||  | |||||   |||||||||||||||||||    
T  23784 gggtgcgattatggtgcataaggaaatccttatgcaccctgcataaatcgataaatggtgttttggagtacaactcaca 23706  T

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Target: scaffold0249; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 23542 - 23595
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||||||||||||||||| |||||  ||||||| ||||||||||| || |||||    
T  23542 tgcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaaatg 23595  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 72748 - 72690
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatgatttt 382  Q
    |||||||||||||||||| |||||  |||||||  ||||||||||| | ||||||||||    
T  72748 tgcggttatggtgcataacgaaatccttatgcactctgcataaatttagaaatgatttt 72690  T

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Target: scaffold0516 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 1294 - 1241
Alignment:
Q  324 tgcggttatggtgcataaagaaatttttatgcatcctgcataaattcaaaaatg 377  Q
    |||||||||||||||||| |||||  ||||||| ||||||||||| || |||||    
T  1294 tgcggttatggtgcataaggaaatccttatgcaccctgcataaatccagaaatg 1241  T

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