View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18506_high_7 (Length: 445)
Name: NF18506_high_7
Description: NF18506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18506_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 409; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 1 - 429
Target Start/End: Original strand, 35115845 - 35116273
Alignment:
| Q |
1 |
atcattgaaaaaatgacaaaatcatttcatgactaaagtgacactgttttaaaaaatgatccaatatttgaagttattttaaaatgacaaaatggacttt |
100 |
Q |
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| T |
35115845 |
atcattgaaaaaatgacaaaatcatttcatgactatagtgacactgttttaaaaaatgatccaatatttgaagttattttaaaatgacaaaatggacttt |
35115944 |
T |
|
| Q |
101 |
tatgccaatatataatgagctcatattcaacatacatacacataacactttctaatataccgacaacacatccctattaaactctaatatatatagtgat |
200 |
Q |
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| T |
35115945 |
tatgccaatatataatgagctcttattcaacatacatacacataacactttctaatataccgacaacacatccctattaaactctaatatatatagtgat |
35116044 |
T |
|
| Q |
201 |
tcttagtgaaagggtacatacacataacacctccaagacaagaaacaaaacaaaagaatggccccaaaatctaccattaaactcctgaccttcttctact |
300 |
Q |
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| T |
35116045 |
tcttagtgaaagggtacatacacataacacctcctagacaagaaacaaaacaaaagaatggcctcaaaatctaccattaaactcctgaccttcttctact |
35116144 |
T |
|
| Q |
301 |
tcatgctcttcggcttcatgaatttaaacagtactgtaatatcattgagtagtaatcatcatcatgcaagcatatgcaatggttccatagctgaatgcaa |
400 |
Q |
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| T |
35116145 |
tcatgctcttcggcttcatgaatttaagcagtactgtaatatcattgagtagtaatcatcatcatgcaagcatatgcaatggttccatagctgaatgcaa |
35116244 |
T |
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| Q |
401 |
tcaagaagatgaacaattgatggagtcag |
429 |
Q |
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| T |
35116245 |
tcaagaagatgaacaattgatggagtcag |
35116273 |
T |
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