View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18506_low_20 (Length: 249)
Name: NF18506_low_20
Description: NF18506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18506_low_20 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 32065611 - 32065847
Alignment:
| Q |
1 |
atgcaaatagcagtgtactgtagtgaaaagaacaattctttcggaatgagtgtgagaatgagataaagatcattaactgagaatctgttaaaaggaggtt |
100 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32065611 |
atgcaaatagcagtgtactgtagtgaaaagaaaaattctttcggaatgagtttgagaatgagataaagatcattaactgagaatctgttaaaaggaggtt |
32065710 |
T |
|
| Q |
101 |
tcttcatcttatctgagctttcatcaccaacagtgagaatggtgacagagtgtccagcaccaagtagctcttttgcaaagtagaagccaatcacagcatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32065711 |
tcttcatcttatctgagctttcatcaccaacagtgagaatggtgacagagtgtccagcaccaagtagctcttttgcaaagtagaagccaatcacagcatg |
32065810 |
T |
|
| Q |
201 |
tccaccactattggtatttatgattagcaccttcttc |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
32065811 |
tccaccactattggtatttatgattagcaccttcttc |
32065847 |
T |
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