View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18508_low_14 (Length: 261)

Name: NF18508_low_14
Description: NF18508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18508_low_14
NF18508_low_14
[»] scaffold0384 (3 HSPs)
scaffold0384 (158-234)||(6141-6217)
scaffold0384 (76-149)||(6041-6124)
scaffold0384 (158-206)||(4807-4853)
[»] scaffold0079 (1 HSPs)
scaffold0079 (1-234)||(8169-8413)
[»] chr7 (39 HSPs)
chr7 (1-122)||(38578861-38578982)
chr7 (8-117)||(17748381-17748490)
chr7 (3-122)||(48804679-48804798)
chr7 (1-117)||(1605935-1606051)
chr7 (1-117)||(13095852-13095968)
chr7 (34-117)||(41945495-41945583)
chr7 (3-117)||(10047875-10047989)
chr7 (70-117)||(28744225-28744272)
chr7 (8-117)||(43861971-43862080)
chr7 (36-119)||(27028303-27028391)
chr7 (70-117)||(5069814-5069861)
chr7 (70-117)||(8734685-8734732)
chr7 (1-115)||(18785663-18785777)
chr7 (70-117)||(48551920-48551967)
chr7 (8-117)||(22973968-22974077)
chr7 (1-122)||(34659220-34659341)
chr7 (8-116)||(26423288-26423395)
chr7 (33-117)||(39420858-39420947)
chr7 (70-110)||(28396166-28396206)
chr7 (70-122)||(34127639-34127691)
chr7 (70-122)||(39475003-39475055)
chr7 (70-117)||(3353487-3353534)
chr7 (8-117)||(1797461-1797570)
chr7 (36-117)||(23658203-23658289)
chr7 (72-117)||(22993366-22993411)
chr7 (77-122)||(45697184-45697229)
chr7 (70-122)||(3603420-3603472)
chr7 (1-122)||(10317740-10317860)
chr7 (70-117)||(24983417-24983465)
chr7 (76-116)||(27875088-27875128)
chr7 (73-117)||(32769003-32769047)
chr7 (70-117)||(4195201-4195248)
chr7 (8-122)||(36619248-36619362)
chr7 (70-117)||(43346778-43346825)
chr7 (70-117)||(48244355-48244402)
chr7 (75-117)||(22268040-22268082)
chr7 (75-108)||(41267932-41267965)
chr7 (70-122)||(22573875-22573927)
chr7 (70-122)||(37514984-37515036)
[»] chr5 (51 HSPs)
chr5 (7-117)||(9805002-9805112)
chr5 (8-117)||(42086326-42086435)
chr5 (1-122)||(8513511-8513632)
chr5 (8-117)||(1538430-1538539)
chr5 (8-117)||(23383656-23383765)
chr5 (1-117)||(5731919-5732035)
chr5 (1-116)||(42291505-42291620)
chr5 (8-120)||(25417179-25417291)
chr5 (70-122)||(20525899-20525951)
chr5 (70-122)||(27648419-27648471)
chr5 (70-122)||(28857010-28857062)
chr5 (70-122)||(28857207-28857259)
chr5 (3-117)||(19572718-19572832)
chr5 (36-122)||(20682611-20682702)
chr5 (75-122)||(20692999-20693046)
chr5 (8-117)||(38897718-38897826)
chr5 (70-117)||(39099778-39099825)
chr5 (36-122)||(43399150-43399241)
chr5 (1-117)||(1898993-1899103)
chr5 (36-117)||(30349601-30349687)
chr5 (36-117)||(40117437-40117523)
chr5 (1-117)||(41163459-41163574)
chr5 (72-117)||(9812935-9812980)
chr5 (72-117)||(12705077-12705122)
chr5 (70-119)||(14588614-14588663)
chr5 (36-116)||(37263262-37263347)
chr5 (3-122)||(12081902-12082021)
chr5 (73-117)||(20255433-20255477)
chr5 (70-122)||(25950588-25950640)
chr5 (46-117)||(42861217-42861293)
chr5 (1-117)||(3653913-3654027)
chr5 (70-117)||(36783304-36783351)
chr5 (37-122)||(9168247-9168337)
chr5 (75-117)||(12766197-12766239)
chr5 (3-117)||(18136275-18136393)
chr5 (68-122)||(24653806-24653860)
chr5 (73-122)||(16755113-16755162)
chr5 (38-122)||(24463880-24463969)
chr5 (70-122)||(14728144-14728196)
chr5 (70-122)||(24875406-24875458)
chr5 (73-117)||(40773337-40773381)
chr5 (70-117)||(5079392-5079438)
chr5 (8-122)||(7866580-7866694)
chr5 (75-122)||(18045704-18045751)
chr5 (1-64)||(28857120-28857178)
chr5 (7-116)||(40060294-40060391)
chr5 (70-116)||(13887516-13887562)
chr5 (70-116)||(21487675-21487721)
chr5 (73-122)||(2485260-2485309)
chr5 (73-122)||(38296724-38296773)
chr5 (73-117)||(21375415-21375459)
[»] chr2 (53 HSPs)
chr2 (36-122)||(25540398-25540489)
chr2 (1-117)||(8410122-8410238)
chr2 (1-117)||(10823051-10823167)
chr2 (8-116)||(20612534-20612644)
chr2 (1-117)||(41220626-41220742)
chr2 (8-122)||(44139482-44139596)
chr2 (1-117)||(12455301-12455417)
chr2 (1-117)||(38005393-38005509)
chr2 (37-124)||(38962785-38962877)
chr2 (36-122)||(6358145-6358236)
chr2 (37-122)||(3643881-3643971)
chr2 (38-121)||(792189-792265)
chr2 (1-117)||(22593126-22593240)
chr2 (37-117)||(27725962-27726047)
chr2 (70-122)||(12864284-12864336)
chr2 (70-122)||(14169603-14169655)
chr2 (70-122)||(16325655-16325707)
chr2 (70-130)||(20116598-20116658)
chr2 (70-122)||(35946798-35946850)
chr2 (1-107)||(331492-331598)
chr2 (70-117)||(7747334-7747381)
chr2 (4-106)||(10026626-10026728)
chr2 (70-117)||(18902529-18902576)
chr2 (12-117)||(41031905-41032010)
chr2 (70-127)||(2550928-2550985)
chr2 (70-111)||(39201513-39201554)
chr2 (70-122)||(9360742-9360794)
chr2 (70-122)||(29422275-29422327)
chr2 (36-122)||(42770645-42770736)
chr2 (70-117)||(44773323-44773370)
chr2 (70-117)||(44945653-44945700)
chr2 (74-116)||(1773644-1773686)
chr2 (76-122)||(11069944-11069990)
chr2 (76-122)||(44023361-44023407)
chr2 (1-117)||(39806884-39807000)
chr2 (3-64)||(45263724-45263780)
chr2 (70-106)||(10046487-10046523)
chr2 (70-122)||(16034997-16035049)
chr2 (85-117)||(29299353-29299385)
chr2 (74-118)||(44193546-44193590)
chr2 (70-117)||(3811690-3811737)
chr2 (73-112)||(10669655-10669694)
chr2 (86-117)||(34346286-34346317)
chr2 (70-117)||(34722740-34722787)
chr2 (70-117)||(37560233-37560280)
chr2 (70-117)||(44548723-44548770)
chr2 (73-122)||(18649020-18649069)
chr2 (73-122)||(34738327-34738376)
chr2 (70-122)||(16813159-16813211)
chr2 (70-122)||(16852438-16852490)
chr2 (70-122)||(28616373-28616425)
chr2 (86-122)||(33005827-33005863)
chr2 (8-115)||(34356204-34356311)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-122)||(6849-6970)
[»] chr6 (28 HSPs)
chr6 (1-122)||(5253217-5253338)
chr6 (36-122)||(3601109-3601200)
chr6 (3-117)||(21898645-21898759)
chr6 (38-117)||(9633624-9633708)
chr6 (37-117)||(30788852-30788937)
chr6 (70-122)||(8938775-8938827)
chr6 (70-117)||(6606096-6606143)
chr6 (70-117)||(14783419-14783466)
chr6 (70-117)||(19089562-19089609)
chr6 (8-122)||(29333133-29333246)
chr6 (69-116)||(8149797-8149844)
chr6 (3-117)||(12635811-12635925)
chr6 (36-122)||(13035998-13036089)
chr6 (70-117)||(13584445-13584492)
chr6 (36-117)||(29444764-29444850)
chr6 (72-117)||(8611973-8612018)
chr6 (74-122)||(9179730-9179778)
chr6 (3-117)||(8932658-8932772)
chr6 (3-117)||(8944124-8944238)
chr6 (36-117)||(12606455-12606541)
chr6 (70-122)||(31129241-31129293)
chr6 (70-122)||(34954613-34954665)
chr6 (70-117)||(13468997-13469044)
chr6 (74-117)||(21872971-21873014)
chr6 (70-112)||(2271307-2271349)
chr6 (70-115)||(4596185-4596230)
chr6 (75-116)||(11142672-11142713)
chr6 (73-117)||(13116129-13116173)
[»] chr8 (35 HSPs)
chr8 (7-122)||(4479290-4479404)
chr8 (3-117)||(6100469-6100583)
chr8 (36-122)||(43032926-43033017)
chr8 (8-116)||(15884556-15884663)
chr8 (1-117)||(10927601-10927717)
chr8 (3-117)||(2467117-2467231)
chr8 (73-122)||(4772045-4772094)
chr8 (3-117)||(14666070-14666184)
chr8 (1-122)||(45521164-45521284)
chr8 (8-117)||(8141104-8141213)
chr8 (72-117)||(2964142-2964187)
chr8 (73-122)||(3379806-3379855)
chr8 (1-117)||(24837237-24837353)
chr8 (70-122)||(8997538-8997590)
chr8 (38-117)||(18374037-18374121)
chr8 (74-122)||(23895636-23895684)
chr8 (70-122)||(43027369-43027421)
chr8 (75-122)||(3418507-3418554)
chr8 (8-122)||(9859989-9860103)
chr8 (1-64)||(38922471-38922529)
chr8 (70-112)||(13357960-13358002)
chr8 (79-117)||(14846648-14846686)
chr8 (73-118)||(1653858-1653903)
chr8 (73-118)||(1742234-1742279)
chr8 (70-117)||(68097-68144)
chr8 (74-117)||(993256-993299)
chr8 (1-64)||(6042816-6042874)
chr8 (86-117)||(11298266-11298297)
chr8 (91-122)||(17845815-17845846)
chr8 (70-117)||(26570988-26571035)
chr8 (36-122)||(44893272-44893363)
chr8 (71-117)||(22212514-22212560)
chr8 (76-121)||(6940627-6940672)
chr8 (74-122)||(16291197-16291245)
chr8 (72-120)||(36662470-36662518)
[»] chr4 (59 HSPs)
chr4 (37-121)||(2559334-2559423)
chr4 (36-122)||(7246640-7246731)
chr4 (3-117)||(29895785-29895899)
chr4 (36-116)||(40780861-40780946)
chr4 (3-122)||(38166025-38166144)
chr4 (4-122)||(38075432-38075550)
chr4 (5-122)||(6779211-6779328)
chr4 (1-122)||(47078454-47078575)
chr4 (1-122)||(55921030-55921151)
chr4 (1-117)||(36145214-36145330)
chr4 (15-122)||(16450310-16450417)
chr4 (8-122)||(52950085-52950199)
chr4 (70-116)||(6032643-6032689)
chr4 (36-117)||(49260664-49260750)
chr4 (76-117)||(4738689-4738730)
chr4 (70-111)||(8889087-8889128)
chr4 (9-117)||(29588740-29588848)
chr4 (37-117)||(42722576-42722661)
chr4 (1-117)||(53599056-53599172)
chr4 (70-122)||(2686449-2686501)
chr4 (3-122)||(3159463-3159582)
chr4 (78-122)||(21429374-21429418)
chr4 (70-122)||(47682376-47682428)
chr4 (39-117)||(5472847-5472930)
chr4 (1-117)||(36262766-36262880)
chr4 (3-106)||(3507269-3507371)
chr4 (45-117)||(43458648-43458725)
chr4 (1-117)||(43468343-43468459)
chr4 (73-122)||(48834694-48834743)
chr4 (70-114)||(1940779-1940823)
chr4 (70-122)||(14567304-14567356)
chr4 (75-122)||(16645188-16645235)
chr4 (36-122)||(17080069-17080160)
chr4 (3-117)||(20128307-20128421)
chr4 (70-117)||(38168321-38168368)
chr4 (158-205)||(41074648-41074695)
chr4 (8-117)||(14124019-14124128)
chr4 (75-117)||(18531589-18531631)
chr4 (75-117)||(25406562-25406604)
chr4 (1-121)||(42722374-42722493)
chr4 (75-116)||(13073608-13073649)
chr4 (73-122)||(27531664-27531713)
chr4 (73-117)||(45721154-45721198)
chr4 (70-122)||(54946314-54946366)
chr4 (75-122)||(295527-295574)
chr4 (3-89)||(1446824-1446910)
chr4 (70-117)||(15829764-15829811)
chr4 (8-122)||(24166453-24166567)
chr4 (70-117)||(30317298-30317345)
chr4 (75-122)||(33176084-33176131)
chr4 (75-117)||(14858780-14858822)
chr4 (75-116)||(33647791-33647832)
chr4 (70-122)||(49952139-49952192)
chr4 (73-117)||(4986261-4986305)
chr4 (74-122)||(14597894-14597942)
chr4 (70-122)||(27248491-27248543)
chr4 (70-118)||(31588751-31588799)
chr4 (78-122)||(33175413-33175457)
chr4 (70-122)||(46108756-46108808)
[»] chr1 (50 HSPs)
chr1 (1-117)||(37339811-37339928)
chr1 (8-117)||(45361882-45361991)
chr1 (1-117)||(8763983-8764099)
chr1 (9-117)||(17642004-17642112)
chr1 (1-107)||(33418125-33418231)
chr1 (3-117)||(41663856-41663970)
chr1 (3-117)||(49078108-49078222)
chr1 (46-122)||(4581677-4581758)
chr1 (1-117)||(43959821-43959937)
chr1 (70-122)||(9659174-9659226)
chr1 (70-122)||(51437518-51437570)
chr1 (70-117)||(26325873-26325920)
chr1 (8-117)||(5855521-5855630)
chr1 (37-122)||(10422811-10422901)
chr1 (38-122)||(10172966-10173055)
chr1 (73-122)||(11397884-11397933)
chr1 (1-117)||(18915859-18915975)
chr1 (70-122)||(5504092-5504144)
chr1 (70-122)||(26660199-26660250)
chr1 (70-122)||(50371829-50371881)
chr1 (4-122)||(2567271-2567389)
chr1 (8-117)||(892302-892406)
chr1 (37-117)||(16263568-16263653)
chr1 (76-117)||(35211172-35211213)
chr1 (70-122)||(6899619-6899671)
chr1 (70-122)||(30927722-30927774)
chr1 (70-122)||(45726428-45726480)
chr1 (36-119)||(8905161-8905237)
chr1 (70-107)||(14254278-14254315)
chr1 (81-122)||(19195433-19195474)
chr1 (73-117)||(3850742-3850786)
chr1 (70-122)||(16956527-16956579)
chr1 (70-114)||(17092480-17092524)
chr1 (70-122)||(31576542-31576594)
chr1 (70-118)||(34878627-34878675)
chr1 (38-117)||(44969688-44969772)
chr1 (73-117)||(50094968-50095012)
chr1 (3-122)||(50503356-50503475)
chr1 (36-122)||(18649347-18649438)
chr1 (72-122)||(14357818-14357868)
chr1 (45-122)||(33498834-33498916)
chr1 (3-65)||(34334352-34334409)
chr1 (75-117)||(34719842-34719884)
chr1 (80-122)||(40702585-40702627)
chr1 (71-117)||(45536784-45536830)
chr1 (73-122)||(2980926-2980975)
chr1 (70-107)||(10507759-10507796)
chr1 (70-122)||(32142841-32142893)
chr1 (70-117)||(35908819-35908864)
chr1 (70-122)||(47084171-47084223)
[»] scaffold0016 (1 HSPs)
scaffold0016 (8-117)||(8700-8809)
[»] chr3 (53 HSPs)
chr3 (1-122)||(35315947-35316068)
chr3 (1-117)||(28572211-28572327)
chr3 (74-122)||(19147025-19147073)
chr3 (3-117)||(47219137-47219251)
chr3 (46-119)||(29762153-29762231)
chr3 (8-117)||(54261224-54261333)
chr3 (9-117)||(7328843-7328950)
chr3 (46-117)||(25294991-25295067)
chr3 (70-117)||(36043674-36043721)
chr3 (8-117)||(47471830-47471938)
chr3 (70-117)||(49021203-49021250)
chr3 (35-116)||(3507534-3507620)
chr3 (73-117)||(3136694-3136738)
chr3 (70-122)||(7650287-7650339)
chr3 (36-122)||(10040577-10040668)
chr3 (70-117)||(15320246-15320293)
chr3 (70-117)||(29127979-29128026)
chr3 (3-117)||(29135906-29136020)
chr3 (3-117)||(45877447-45877561)
chr3 (74-117)||(51060281-51060324)
chr3 (70-107)||(8683250-8683287)
chr3 (70-122)||(30767242-30767294)
chr3 (3-122)||(51682949-51683068)
chr3 (70-117)||(13893986-13894033)
chr3 (3-117)||(41630512-41630626)
chr3 (75-122)||(45450442-45450489)
chr3 (8-117)||(47749105-47749213)
chr3 (70-117)||(54237508-54237555)
chr3 (1-122)||(31072869-31072990)
chr3 (70-116)||(53649787-53649833)
chr3 (72-117)||(44064606-44064651)
chr3 (70-122)||(21325124-21325176)
chr3 (73-117)||(23511630-23511674)
chr3 (70-122)||(55069674-55069726)
chr3 (70-117)||(928660-928707)
chr3 (70-117)||(7310703-7310750)
chr3 (70-117)||(19873432-19873479)
chr3 (70-117)||(22909843-22909890)
chr3 (70-117)||(26361967-26362014)
chr3 (74-117)||(35998571-35998614)
chr3 (70-117)||(43330732-43330779)
chr3 (75-122)||(48342085-48342132)
chr3 (73-112)||(50405608-50405647)
chr3 (70-116)||(11393476-11393522)
chr3 (75-117)||(29195319-29195361)
chr3 (70-115)||(50682525-50682570)
chr3 (73-122)||(50753336-50753385)
chr3 (86-122)||(10043758-10043794)
chr3 (75-107)||(32522044-32522076)
chr3 (73-117)||(34374442-34374486)
chr3 (70-106)||(45402362-45402398)
chr3 (70-122)||(47164166-47164218)
chr3 (70-122)||(49543579-49543631)
[»] scaffold0002 (2 HSPs)
scaffold0002 (36-117)||(319446-319532)
scaffold0002 (70-122)||(633-685)
[»] scaffold0009 (2 HSPs)
scaffold0009 (38-122)||(42826-42915)
scaffold0009 (76-116)||(9511-9551)
[»] scaffold0011 (2 HSPs)
scaffold0011 (70-117)||(224380-224427)
scaffold0011 (70-116)||(186580-186626)
[»] scaffold0010 (1 HSPs)
scaffold0010 (36-117)||(155710-155796)
[»] scaffold0170 (1 HSPs)
scaffold0170 (36-107)||(9869-9945)
[»] scaffold0041 (1 HSPs)
scaffold0041 (75-122)||(25153-25200)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-117)||(7834-7950)
scaffold0004 (70-117)||(94979-95027)
[»] scaffold0376 (1 HSPs)
scaffold0376 (2-122)||(12665-12785)
[»] scaffold0006 (1 HSPs)
scaffold0006 (70-114)||(68577-68621)
[»] scaffold0005 (3 HSPs)
scaffold0005 (70-122)||(250019-250071)
scaffold0005 (1-62)||(271133-271189)
scaffold0005 (74-122)||(219436-219484)
[»] scaffold0086 (1 HSPs)
scaffold0086 (36-122)||(26207-26298)
[»] scaffold0316 (1 HSPs)
scaffold0316 (76-117)||(1613-1654)
[»] scaffold0029 (1 HSPs)
scaffold0029 (70-117)||(41107-41154)
[»] scaffold0045 (1 HSPs)
scaffold0045 (74-122)||(58027-58075)


Alignment Details
Target: scaffold0384 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 6141 - 6217
Alignment:
Q  158 tacaattggtttataaaatgaaaaggaggtgatttgagctacccatttgcagagcttgtgagatgacgatgattgag 234  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6141 tacaattggtttataaaatgaaaaggaggtgatttgagttacccatttgcagagcttgtgagatgacgatgattgag 6217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 6041 - 6124
Alignment:
Q  76 attagtcgtccacctttggtgggtcggaaaccggtgcgaaag----------aaaaagacaataacatgagagaatcaagaatt 149  Q
    |||||||||||||| |||||||||||||||||| |||  |||          ||||||||||||||||||||||||||||||||    
T  6041 attagtcgtccaccattggtgggtcggaaaccgatgcttaagcaagaaaagaaaaaagacaataacatgagagaatcaagaatt 6124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 4807 - 4853
Alignment:
Q  158 tacaattggtttataaaatgaaaaggaggtgatttgagctacccatttg 206  Q
    |||||| ||||||||||||||||  ||||||||||||| ||||||||||    
T  4807 tacaatcggtttataaaatgaaa--gaggtgatttgagttacccatttg 4853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 8169 - 8413
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactatagccggattagtcgtccacctttggtgggtc 100  Q
    |||||| |||||||||||||||||||||      ||||||||| |||||||||||||||||||| ||| |      ||||||||||||||||||| ||||    
T  8169 acccggggaataccgggttcgattccca------agggaacaacgcttggccagtgcgcatgcctctaca------ttagtcgtccacctttggtaggtc 8256  T
Q  101 ggaaaccggtgcgaaagaaaaa----------------gacaataacatgagagaatcaagaattnnnnnnnntacaa------ttggtttataaaatga 178  Q
    ||||||||||||||||| ||||                |||||||||||||||||||||||||||        || ||      ||||||||||||||||    
T  8257 ggaaaccggtgcgaaagcaaaaaataaaaaaaagaaaagacaataacatgagagaatcaagaattaaaaaaaataaaaaataaattggtttataaaatga 8356  T
Q  179 aaaggaggtgatttgagctacccatttgcagagcttgtgagatgac-gatgattgag 234  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  8357 aaaggaggttatttgagctacccatttgcaaagcttgtgagatgactgatgattgag 8413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 38578982 - 38578861
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| ||||| |||||||||||||||||||     |||||| |||||||||||||||||||| |||      |||||||||||||| |||||||||||    
T  38578982 acccggggaatatcgggttcgattcccagggg-----gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggt 38578888  T
Q  96 gggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||||||||||    
T  38578887 gggtcggaaaccggtgcgaaagaaaaa 38578861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 17748490 - 17748381
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    |||||||||||||||||||||||||     |||||| |||||||||||||||||||| |||      |||||||||||||||||||||||| ||||||||    
T  17748490 gaataccgggttcgattcccagggg-----gaacaacgcttggccagtgcgcatgcctctacgtacgagccggattagtcgtccacctttgttgggtcgg 17748396  T
Q  103 aaaccggtgcgaaag 117  Q
    |||||| ||||||||    
T  17748395 aaaccgatgcgaaag 17748381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 48804679 - 48804798
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| ||||||||||||||||||||| |||     ||||||  ||||||||||||||||||| |||      |||||||||||||||||||| |||||||    
T  48804679 ccggggaataccgggttcgattcccaaggg-----gaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgg 48804773  T
Q  98 gtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||| ||||    
T  48804774 gtcggaaaccggtgcgaaagcaaaa 48804798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1605935 - 1606051
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||||||||||| ||||||||| |||||||     |||||| ||||||||||||| |||||| |||      |||||||||||||| |||||||||||    
T  1605935 acccggagaatacctggttcgatttccagggg-----gaacaacgcttggccagtgcacatgcctctaggcttgagccggattagtcgcccacctttggt 1606029  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    || |||||||||||||||||||    
T  1606030 ggatcggaaaccggtgcgaaag 1606051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13095852 - 13095968
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| ||||||||||||| |||||||||||     ||||||  ||||||||||||||||||| |||      ||||||||||||||  ||||||||||    
T  13095852 acccggggaataccgggttctattcccagggg-----gaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggt 13095946  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||| ||||    
T  13095947 gggtcggaaaccggtgcaaaag 13095968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 41945495 - 41945583
Alignment:
Q  34 aagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||| || |||||||||||||||||||| |||      ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  41945495 aagggaataacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgcgaaag 41945583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 10047989 - 10047875
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| |||||||||||||||||||||||||     ||||||  ||||||||||||||| ||| |||      ||| | |||||||||||||| |||||||    
T  10047989 ccggggaataccgggttcgattcccagggg-----gaacaacacttggccagtgcgcaggcctctacgcatgagcagaattagtcgtccaccattggtgg 10047895  T
Q  98 gtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||    
T  10047894 gtcggaaaccggtgcgaaag 10047875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 28744225 - 28744272
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28744225 agccggattagtcgtccacctttggtgggtcggaaactggtgcgaaag 28744272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 43862080 - 43861971
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    |||||||||||||||||||||||||     |||||| | |||||||||||||||||| |||      ||||||||||||| | |||||||||||| |||     
T  43862080 gaataccgggttcgattcccagggg-----gaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtcattcacctttggtggatcga 43861986  T
Q  103 aaaccggtgcgaaag 117  Q
    |||||||||||||||    
T  43861985 aaaccggtgcgaaag 43861971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 27028303 - 27028391
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactata-----gccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaa 119  Q
    ||||||||  ||||||||||||||||||| ||| |     || ||||||||||  ||||||||||||||||||||||||||||||||||    
T  27028303 gggaacaacacttggccagtgcgcatgcctctacacatgagctggattagtcgctcacctttggtgggtcggaaaccggtgcgaaagaa 27028391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 5069861 - 5069814
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||    
T  5069861 agccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaag 5069814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 8734732 - 8734685
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  8734732 agccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 8734685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 18785663 - 18785777
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| ||||||||||||||||||| |||||     ||||||  ||||||||||||||||||| |||      | | ||||||||||| ||||| ||||    
T  18785663 acccggggaataccgggttcgattcctagggg-----gaacaacacttggccagtgcgcatgcctctacgcatgaactggattagtcgttcacctctggt 18785757  T
Q  96 gggtcggaaaccggtgcgaa 115  Q
    ||||||||||||||||||||    
T  18785758 gggtcggaaaccggtgcgaa 18785777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 48551920 - 48551967
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  48551920 agccggattagtcgtccacctttgatggatcggaaaccggtgcgaaag 48551967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 22973968 - 22974077
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    |||||||||||||||||| ||||||     |||||| |||||||||||| ||||||  |||      |||| |||||||||||||||||||||||||| |    
T  22973968 gaataccgggttcgattctcagggg-----gaacaacgcttggccagtgtgcatgcgtctacgcatgagccagattagtcgtccacctttggtgggtcag 22974062  T
Q  103 aaaccggtgcgaaag 117  Q
    ||||||| |||||||    
T  22974063 aaaccggcgcgaaag 22974077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 34659220 - 34659341
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| |||||||||||||||||| || |||     |||||| ||||| |||||||||||||| |||      |||||||||||||| ||||| |||||    
T  34659220 acccggggaataccgggttcgattctcaaggg-----gaacaacgcttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccaccattggt 34659314  T
Q  96 gggtcggaaaccggtgcgaaagaaaaa 122  Q
    | |||| ||||||||||||||| ||||    
T  34659315 gtgtcgaaaaccggtgcgaaagcaaaa 34659341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 26423395 - 26423288
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    ||||||||||||||||||||||||||||     ||| ||||||||||||| | |||| |||      |||| |||||||||| |||||||||||| ||||    
T  26423395 gaataccgggttcgattcccaggggaaa-----caacgcttggccagtgcacctgcctctacgcacgagccagattagtcgttcacctttggtgg-tcgg 26423302  T
Q  103 aaaccggtgcgaaa 116  Q
    ||||||||||||||    
T  26423301 aaaccggtgcgaaa 26423288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 39420858 - 39420947
Alignment:
Q  33 aaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||| ||||||||||||||| |||| |||      |||||||||||||||| ||||||| |||| ||||||||||||| ||||    
T  39420858 aaagggaacaacgcttggccagtgcgcgtgcctctacgcatgagccggattagtcgtctacctttgatgggccggaaaccggtgcaaaag 39420947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 28396206 - 28396166
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggt 110  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  28396206 agccggattagtcgtctacctttggtgggtcggaaaccggt 28396166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 34127691 - 34127639
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||||| ||||    
T  34127691 agccggattagtcgcccacctttggtgggtcaaaaaccggtgcgaaagcaaaa 34127639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 39475003 - 39475055
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||    
T  39475003 agccggattagtcgtccacctttagtgggtcgaaaaccagtgcgaaagcaaaa 39475055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 3353487 - 3353534
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||||||||||| ||| || ||||||||||||||||    
T  3353487 agccggattagtcgtccacctttgatggatcagaaaccggtgcgaaag 3353534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 1797461 - 1797570
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccacta-----tagccggattagtcgtccacctttggtgggtcgg 102  Q
    ||||||||||||||||||||||||||     ||||| |||||||||||||||||| | |||      ||||||| |||||||||| ||||| ||| |||     
T  1797461 gaataccgggttcgattcccagggga-----aacaacgcttggccagtgcgcatgtctctacgcacgagccggactagtcgtccatctttgatggatcga 1797555  T
Q  103 aaaccggtgcgaaag 117  Q
    |||||||||| ||||    
T  1797556 aaaccggtgcaaaag 1797570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 23658203 - 23658289
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactata-----gccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||| |||||||||||| ||||||| ||| |     ||||||||||||||||| |||||||||||| |||||| |||| ||||    
T  23658203 gggaacaacgcttggccagtgtgcatgcctctacacacgagccggattagtcgtccatctttggtgggtcagaaacctgtgcaaaag 23658289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 22993411 - 22993366
Alignment:
Q  72 ccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||  ||||||||||||||| ||||||||||||||||    
T  22993411 ccggattagtcgctcacctttggtgggtcagaaaccggtgcgaaag 22993366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 45697229 - 45697184
Alignment:
Q  77 ttagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||||||||||||||||||| || |||||| ||||    
T  45697229 ttagtcgtccacctttggtgggtcggaaaccagtacgaaagcaaaa 45697184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 3603420 - 3603472
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||| |||| ||| |||||||||||||||| ||||||||||| ||||    
T  3603420 agccggattaatcgttcacttttggtgggtcggaaatcggtgcgaaagtaaaa 3603472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 10317860 - 10317740
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat----agccggattagtcgtccacctttggtg 96  Q
    |||||| |||||||||||||||||||||||||     ||| ||  ||||| ||||||| ||||| ||||    |  | |||||||||  |||||||||||    
T  10317860 acccggggaataccgggttcgattcccagggg-----gaataacacttggtcagtgcgtatgcctctatgcataagcagattagtcgctcacctttggtg 10317766  T
Q  97 ggtcggaaaccggtgcgaaagaaaaa 122  Q
    | ||||||||||||||||||| ||||    
T  10317765 gatcggaaaccggtgcgaaagcaaaa 10317740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 24983465 - 24983417
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtc-ggaaaccggtgcgaaag 117  Q
    |||||||||||||||||||| |||||||||| |||||||| ||||||||    
T  24983465 agccggattagtcgtccaccattggtgggtctggaaaccgatgcgaaag 24983417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 27875128 - 27875088
Alignment:
Q  76 attagtcgtccacctttggtgggtcggaaaccggtgcgaaa 116  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  27875128 attagtcgtccacctttagtgggtcgaaaaccggtgcgaaa 27875088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 32769003 - 32769047
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||| |||||||||||| ||||||||||||| |||||    
T  32769003 cggattagtcgttcacctttggtggatcggaaaccggtgtgaaag 32769047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 4195248 - 4195201
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||| |||||||| ||||||||| |||||||| ||||||||    
T  4195248 agccggattagccgtccaccattggtgggttggaaaccgatgcgaaag 4195201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 36619362 - 36619248
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    |||||||||||||||||||||||||     ||||||  |||| |||||| ||||||| |||      |||||||||||||||||||| ||||||||||      
T  36619362 gaataccgggttcgattcccagggg-----gaacaacacttgtccagtgtgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcaa 36619268  T
Q  103 aaaccggtgcgaaagaaaaa 122  Q
    ||||| ||| ||||| ||||    
T  36619267 aaaccagtgtgaaagcaaaa 36619248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 43346825 - 43346778
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||  || ||||||||||||||||||| |||||||||    
T  43346825 agccggattagtcgctcatctttggtgggtcggaaaccagtgcgaaag 43346778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 48244402 - 48244355
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||  |||||||||||| ||| |||||||||||||||    
T  48244402 agccggattagtcgctcacctttggtggatcgaaaaccggtgcgaaag 48244355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 22268082 - 22268040
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||  |||||||||||| |||||||||||||||||||    
T  22268082 gattagtcgctcacctttggtggatcggaaaccggtgcgaaag 22268040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 41267965 - 41267932
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccg 108  Q
    ||||||||||||||||||| ||||||||||||||    
T  41267965 gattagtcgtccacctttgatgggtcggaaaccg 41267932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 22573875 - 22573927
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||| ||||||| | ||| ||||| | ||||||||||||||||||||    
T  22573875 agccggattaatcgtccatcattgatgggttgaaaaccggtgcgaaagaaaaa 22573927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 37514984 - 37515036
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||| |||| |||| || |||||||||||||||||| ||||| ||||    
T  37514984 agccggattaatcgttcaccattagtgggtcggaaaccggtgtgaaagtaaaa 37515036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 9805002 - 9805112
Alignment:
Q  7 agaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcg 101  Q
    ||||||||||||||||||||||||||     |||||| |||||||||||||||||||| |||      ||||||||||||||||||||||||||||||||    
T  9805002 agaataccgggttcgattcccagggg-----gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcg 9805096  T
Q  102 gaaaccggtgcgaaag 117  Q
    ||||| ||||||||||    
T  9805097 gaaacaggtgcgaaag 9805112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 42086326 - 42086435
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    |||||||||||||||||||||||||     |||||| ||||| |||||||||||||| |||      |||||||||||||||||||||||||||||||||    
T  42086326 gaataccgggttcgattcccagggg-----gaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcgg 42086420  T
Q  103 aaaccggtgcgaaag 117  Q
    |||||||||||||||    
T  42086421 aaaccggtgcgaaag 42086435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 8513511 - 8513632
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| ||||||||||||||||||| ||||||||     ||| ||||||||||||| |||||| |||      |||| |||||||||||||||||||||    
T  8513511 acccggggaataccgggttcgattcctaggggaaa-----caatgcttggccagtgcacatgcctctacgcacgagccagattagtcgtccacctttggt 8513605  T
Q  96 gggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||||| ||||    
T  8513606 gggtcggaaaccggtgcgaaagcaaaa 8513632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 1538430 - 1538539
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    |||||||||||||||||||||||||     ||||||  ||||||||||||||||||| |||      |||||||||| ||||||||| ||||||||||||    
T  1538430 gaataccgggttcgattcccagggg-----gaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcgg 1538524  T
Q  103 aaaccggtgcgaaag 117  Q
    |||||||||||||||    
T  1538525 aaaccggtgcgaaag 1538539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 23383656 - 23383765
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    |||||||||||||||||||||||||     |||||| ||||||||||||||| |||| |||      ||| |||||||||||||||||||||||||||||    
T  23383656 gaataccgggttcgattcccagggg-----gaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcgg 23383750  T
Q  103 aaaccggtgcgaaag 117  Q
    |||| ||||||||||    
T  23383751 aaactggtgcgaaag 23383765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 5732035 - 5731919
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| ||||||||||||||||||||||| |     |||||| |||||||||||||||||||| |||      |||| |||||||||| ||||||| ||    
T  5732035 acccggggaataccgggttcgattcccaggag-----gaacaacgcttggccagtgcgcatgcctctacgtatgagccagattagtcgttcacctttagt 5731941  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||||    
T  5731940 gggtcggaaaccggtgcgaaag 5731919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 42291620 - 42291505
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    ||||||||||||||||||| |||||||||||      |||||| ||||||||||||| |||||| |||      |||||||||||||||||||||||| |    
T  42291620 acccggagaataccgggtttgattcccagggt-----gaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgtccacctttgat 42291526  T
Q  96 gggtcggaaaccggtgcgaaa 116  Q
    || ||||||||||||||||||    
T  42291525 ggatcggaaaccggtgcgaaa 42291505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 25417291 - 25417179
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccacta-----tagccggattagtcgtccacctttggtgggtcgg 102  Q
    |||||||||||||||||||||||||     |||||| |||||||||||||||||||| |||      ||||||||||||| |  ||| |||||||||| |    
T  25417291 gaataccgggttcgattcccagggg-----gaacaacgcttggccagtgcgcatgcctctacgaacgagccggattagtcatttaccattggtgggtcag 25417197  T
Q  103 aaaccggtgcgaaagaaa 120  Q
    ||||||||||||||||||    
T  25417196 aaaccggtgcgaaagaaa 25417179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 20525899 - 20525951
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||| |||||    
T  20525899 agccggattagtcgtccaccattggtggatcggaaaccggtgcgaaaaaaaaa 20525951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 27648471 - 27648419
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  27648471 agccggattagtcgtccatctttggtggatcggaaaccgatgcgaaagaaaaa 27648419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 28857010 - 28857062
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  28857010 agccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaagcaaaa 28857062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 28857207 - 28857259
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  28857207 agccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaagcaaaa 28857259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 19572718 - 19572832
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| |||||||||||| ||||||||||||     ||||||  ||||||||||||||||||| |||      ||||||||||||||| |||| |||||||    
T  19572718 ccggggaataccgggttagattcccagggg-----gaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtgg 19572812  T
Q  98 gtcggaaaccggtgcgaaag 117  Q
    || ||||||| |||||||||    
T  19572813 gttggaaaccagtgcgaaag 19572832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 20682702 - 20682611
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||| |||||||||||||||||||| |||      |||||||||| ||| |||||||| |||||| ||||||||||||||||| ||||    
T  20682702 gggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattaatcgaccacctttagtgggttggaaaccggtgcgaaagcaaaa 20682611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 122
Target Start/End: Original strand, 20692999 - 20693046
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  20692999 gattagttgtccacctttggtgggtcggaaaccggtgcgaaagtaaaa 20693046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 38897826 - 38897718
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    ||||||||||||||||| |||||||||      ||| |||||||||||||||||||| |||      |||||||||||| | ||||||||||||| ||||    
T  38897826 gaataccgggttcgatttccaggggaa------caacgcttggccagtgcgcatgcctctacgcacgagccggattagttgcccacctttggtggatcgg 38897733  T
Q  103 aaaccggtgcgaaag 117  Q
    ||||| |||||||||    
T  38897732 aaaccagtgcgaaag 38897718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 39099825 - 39099778
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||    
T  39099825 agccggattagtcgcccacctttggtgggtcggaaaccggtgcaaaag 39099778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 43399150 - 43399241
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||| || |||||||||||||||||||| |||      ||| ||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  43399150 gggaataacgcttggccagtgcgcatgcctctacgcacgagcaggattagtcgtccacatttggttggtcggaaaccggtgcgaaagcaaaa 43399241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1898993 - 1899103
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgc-cactatagccggattagtcgtccacctttggtgggt 99  Q
    |||||| |||||||||||||||||||||||     |||||||| ||||||||||||||||||| |||   ||||| |||||||  |||||||| ||||||    
T  1898993 acccggggaataccgggttcgattcccagg-----gggaacaacgcttggccagtgcgcatgcgcac--gagccgaattagtcacccaccttttgtgggt 1899085  T
Q  100 cggaaaccggtgcgaaag 117  Q
      ||||||||||| ||||    
T  1899086 tagaaaccggtgcaaaag 1899103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 30349601 - 30349687
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||| | |||||||||||||||||| ||||     ||| | |||||||||||||||| |||||| ||||||||||||||||||    
T  30349601 gggaacaatgattggccagtgcgcatgcctctatgcatgagctgaattagtcgtccaccttaggtgggccggaaaccggtgcgaaag 30349687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 40117437 - 40117523
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||| |||||||||||||||||||| |||      |||||||||| |||| |||||||||||| ||| |||||||||||||||    
T  40117437 gggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttggtggatcgaaaaccggtgcgaaag 40117523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 41163574 - 41163459
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| |||||||||||||||||||||||||||      ||| | ||||||||||| |||| | |||      ||| ||||||||||||||||||| ||    
T  41163574 acccggggaataccgggttcgattcccaggggaa------caacgtttggccagtgcacatgtctctacgcatgagctggattagtcgtccaccttttgt 41163481  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    ||||||||||| ||||||||||    
T  41163480 gggtcggaaactggtgcgaaag 41163459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 9812935 - 9812980
Alignment:
Q  72 ccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||    
T  9812935 ccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 9812980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 12705077 - 12705122
Alignment:
Q  72 ccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||    
T  12705077 ccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 12705122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 14588663 - 14588614
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaa 119  Q
    ||||||||||||||||||||||||||| | || |||||||||||||||||    
T  14588663 agccggattagtcgtccacctttggtgagccgaaaaccggtgcgaaagaa 14588614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 37263262 - 37263347
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 116  Q
    |||||||| ||||||||| |||||||||| |||      |||||||||||||||||||||||  ||| ||||||||||||||||||    
T  37263262 gggaacaacgcttggccaatgcgcatgcctctacgcacgagccggattagtcgtccacctttattggatcggaaaccggtgcgaaa 37263347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 12081902 - 12082021
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| |||||| ||||||||||| ||||||     |||||| |||||||||||||||||||  |||      ||||| |||||||||||||||||||||     
T  12081902 ccggggaatactgggttcgattctcagggg-----gaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtcgtccacctttggtga 12081996  T
Q  98 gtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||| ||||| ||||| ||||    
T  12081997 gtcggaaatcggtgtgaaagcaaaa 12082021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 20255433 - 20255477
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||    
T  20255433 cggattagtcgtccacctttggtgagtcggaaactggtgcgaaag 20255477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 25950640 - 25950588
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||| ||||    
T  25950640 agccggattagtcgtccacctttggtgggtcgaaaatcgatgcgaaaggaaaa 25950588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 42861293 - 42861217
Alignment:
Q  46 cttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||| |||      |||||||||| ||||||||| ||||||||||||| |||||||||||||    
T  42861293 cttggccagtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggagaccggtgcgaaag 42861217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 3654027 - 3653913
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||||||||||||||||||||||| || |       ||||| ||||| |||||||||||||| |||      || |||||||||||||||||||||||    
T  3654027 acccggagaataccgggttcgattcctagag-------aacaacgcttgaccagtgcgcatgcctctacgcacgaggcggattagtcgtccacctttggt 3653935  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    || ||| |||||||||| ||||    
T  3653934 ggatcgaaaaccggtgcaaaag 3653913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 36783304 - 36783351
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||||||| ||||||||| |||||||||||| ||||    
T  36783304 agccggattagtcgtccaccattggtgggttggaaaccggtgcaaaag 36783351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 9168337 - 9168247
Alignment:
Q  37 ggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||| ||||||||||||||||| || |||      ||||||||||||||||||||||| |||||||| ||| |||||| |||| ||||    
T  9168337 ggaacaacgcttggccagtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgggtcgaaaatcggtgcaaaagcaaaa 9168247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 12766197 - 12766239
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  12766197 gattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 12766239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 18136393 - 18136275
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactata-----gccggatta----gtcgtccacctttg 93  Q
    ||||||||||||||||||||||||||||||     ||||||  ||||| ||||| ||||||| ||| |     |||||||||    |||||||||| |||    
T  18136393 ccggagaataccgggttcgattcccagggg-----gaacaacacttggtcagtgtgcatgcctctacacatgagccggattaattagtcgtccaccattg 18136299  T
Q  94 gtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||| ||||    
T  18136298 gtgggtcggaaaccggtgcaaaag 18136275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 24653860 - 24653806
Alignment:
Q  68 atagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||| ||||||||| ||||||||||| |||||| |||||||| ||||    
T  24653860 atagccggattaatcgtccaccattggtgggtcgaaaaccgatgcgaaagcaaaa 24653806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 16755113 - 16755162
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||||  |||||||||  |||||||||||||||||||||    
T  16755113 cggattagtcgtccactattggtgggttagaaaccggtgcgaaagaaaaa 16755162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 24463969 - 24463880
Alignment:
Q  38 gaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||| | |||||||||||||||||| ||||     |||||||||||||| ||||||||  ||||||| |||||||||| |||| ||||    
T  24463969 gaacaacgattggccagtgcgcatgcctctatgcacgagccggattagtcgcccacctttactgggtcgaaaaccggtgcaaaagtaaaa 24463880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 14728144 - 14728196
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||| |  |||||||| ||||||||||||||||||||||| ||||    
T  14728144 agccggattagttgctcacctttgatgggtcggaaaccggtgcgaaagcaaaa 14728196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 24875406 - 24875458
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||| ||||||||||||| ||||||||||| |  |||||||||||||    
T  24875406 agccggattaatcgtccacctttgatgggtcggaaatcaatgcgaaagaaaaa 24875458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 40773337 - 40773381
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||| || |||||||| ||||||||||||||||||||    
T  40773337 cggattagtcgttcatctttggtgcgtcggaaaccggtgcgaaag 40773381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 5079392 - 5079438
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||| ||||||||||| ||||| |||||||||||||||    
T  5079392 agccggattagtcgcccacctttggt-ggtcgaaaaccggtgcgaaag 5079438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 7866580 - 7866694
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    ||||||||||||||||||| ||| |     |||||| |||||||||||| ||||||| |||      | |||||||||||| |||||||||||||||  |    
T  7866580 gaataccgggttcgattccgaggag-----gaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtcgcccacctttggtgggttag 7866674  T
Q  103 aaaccggtgcgaaagaaaaa 122  Q
    ||||| ||||||||| ||||    
T  7866675 aaaccagtgcgaaagcaaaa 7866694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 122
Target Start/End: Original strand, 18045704 - 18045751
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||| |||||||||||| |||| |||||||||| |||||||||||||    
T  18045704 gattaatcgtccacctttagtggatcggaaaccgatgcgaaagaaaaa 18045751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28857120 - 28857178
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgcc 64  Q
    |||||| |||||||||||||||||||||||     ||||||||  |||||||||||||||||||    
T  28857120 acccggggaataccgggttcgattcccagg-----gggaacaacacttggccagtgcgcatgcc 28857178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 40060294 - 40060391
Alignment:
Q  7 agaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactatagccggattagtcgtccacctttggtgggtcggaaac 106  Q
    ||||||||||||||||||  ||||||     ||||||  |||||||||||||||||       |||||||||| ||||||||| ||| ||||| ||||||    
T  40060294 agaataccgggttcgattttcagggg-----gaacaacacttggccagtgcgcatg-------agccggattaatcgtccaccattgatgggttggaaac 40060381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 13887516 - 13887562
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 116  Q
    |||||||||||||| ||||||||  |||||||||| |||||||||||    
T  13887516 agccggattagtcgcccacctttaatgggtcggaacccggtgcgaaa 13887562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 21487675 - 21487721
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 116  Q
    |||||||||||||| ||||||||  ||||||| ||||||||||||||    
T  21487675 agccggattagtcgcccacctttaatgggtcgaaaaccggtgcgaaa 21487721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 2485260 - 2485309
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||  |||||||| |||||||||||||| |||||||| ||||    
T  2485260 cggattagtcgctcacctttgatgggtcggaaaccgatgcgaaagtaaaa 2485309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 38296773 - 38296724
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||| ||||||||| |||||||||||||| ||| |||| ||||    
T  38296773 cggattagtcgcccacctttgatgggtcggaaaccgatgcaaaagcaaaa 38296724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 21375415 - 21375459
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||| ||||| ||| ||||||||| |||||||||    
T  21375415 cggattagtcgtccatctttgatggatcggaaaccagtgcgaaag 21375459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 25540489 - 25540398
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||| |||||||||||||||||||| |||      |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25540489 gggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagcaaaa 25540398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 8410122 - 8410238
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||||||||| |||||||||||||||||||     ||||||  ||||||||||||||||||| |||      |||||||||||||| |||| |||||     
T  8410122 acccggagaatatcgggttcgattcccagggg-----gaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacttttggg 8410216  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||||    
T  8410217 gggtcggaaaccggtgcgaaag 8410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 10823051 - 10823167
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| |||||||||||| |||||||||| |     |||||| |||||||||||||||||||| |||      |||||||||||||| |||||||| ||    
T  10823051 acccggggaataccgggtttgattcccaggag-----gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccaccttttgt 10823145  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||||    
T  10823146 gggtcggaaaccggtgcgaaag 10823167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 20612644 - 20612534
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccgg-attagtcgtccacctttggtgggtcg 101  Q
    |||||||||||||||||| ||||    |||||||||  ||||||||||||||||||| ||||     |||||| |||||||||||||| |||||||||||    
T  20612644 gaataccgggttcgattctcagg----agggaacaacacttggccagtgcgcatgcctctatgcatgagccgggattagtcgtccaccattggtgggtcg 20612549  T
Q  102 gaaaccggtgcgaaa 116  Q
    |||||||||||||||    
T  20612548 gaaaccggtgcgaaa 20612534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 41220626 - 41220742
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| ||||||||||||||||||||||| |     |||||| |||||||||||||||||||| |||      ||||| ||||||||| ||||||| ||    
T  41220626 acccggggaataccgggttcgattcccaggag-----gaacaacgcttggccagtgcgcatgcctctacgcatgagccgaattagtcgttcacctttagt 41220720  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||||    
T  41220721 gggtcggaaaccggtgcgaaag 41220742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 44139482 - 44139596
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    |||||||||||||||||||||||||     |||||| ||||||||||||||| |||| |||      |||||||||||||| |||||  |||||||||||    
T  44139482 gaataccgggttcgattcccagggg-----gaacaacgcttggccagtgcgcgtgcctctacgcacgagccggattagtcgcccaccaatggtgggtcgg 44139576  T
Q  103 aaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||| ||||    
T  44139577 aaaccggtgcgaaagcaaaa 44139596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12455301 - 12455417
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| ||||||||||||||||| ||||||||||     ||| |||| ||||||||||||||| |||      ||||||||||||||  |||| |||||    
T  12455301 acccggggaataccgggttcgatttccaggggaaa-----caacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggt 12455395  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||||    
T  12455396 gggtcggaaaccggtgcgaaag 12455417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 38005393 - 38005509
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactata-----gccggattagtcgtccacctttggt 95  Q
    |||||| |||||| |||||||||||||| |||     |||||| |||||||||||||||||||| ||| |     ||||||||||||| |||||||||||    
T  38005393 acccggggaatactgggttcgattcccaaggg-----gaacaacgcttggccagtgcgcatgcctctacacatgagccggattagtcgcccacctttggt 38005487  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    || |||||||| ||||||||||    
T  38005488 ggatcggaaactggtgcgaaag 38005509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 38962785 - 38962877
Alignment:
Q  37 ggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaaga 124  Q
    ||||||| |||||||||||||||||||| |||      | ||||||||||||||||||||||||||||| ||||| |||||||||||| ||||    
T  38962785 ggaacaacgcttggccagtgcgcatgcctctacgcatgaaccggattagtcgtccacctttggtgggtcagaaactggtgcgaaagaagaaga 38962877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 6358236 - 6358145
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||  ||||||||||||||||||| |||      |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  6358236 gggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcgaaaaccggtgtgaaagaaaaa 6358145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 3643971 - 3643881
Alignment:
Q  37 ggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||| |||||||||||||||||||| |||      ||| ||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  3643971 ggaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggccggaaaccgttgcgaaagcaaaa 3643881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 121
Target Start/End: Original strand, 792189 - 792265
Alignment:
Q  38 gaacaaagcttggccagtgcgcatgccactatagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaa 121  Q
    |||||| ||||||||||||||||||       |||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  792189 gaacaacgcttggccagtgcgcatg-------agccggattagtcgcccatctttggtgggtcggaaaccggtgcaaaagaaaa 792265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22593126 - 22593240
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| |||||| | ||||||||||||||||     |||||| | |||||||||||||||||| |||      ||||||||||||||||||||||||||    
T  22593126 acccggggaatactgagttcgattcccagggg-----gaacaacg-ttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggt 22593219  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    ||||||| ||||||||||||||    
T  22593220 gggtcgg-aaccggtgcgaaag 22593240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 27725962 - 27726047
Alignment:
Q  37 ggaacaaagcttggccagtgcgcatgccacta-----tagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||| |||||||||||||||||||| |||     ||||||||||||||| |||||  |||||||||||||||||||| |||||    
T  27725962 ggaacaatgcttggccagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtcggaaaccggtgtgaaag 27726047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 12864284 - 12864336
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  12864284 agccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaagtaaaa 12864336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 14169655 - 14169603
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  14169655 agccggattagtcgtctaccattggtgggtcggaaaccggtgcgaaagtaaaa 14169603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 16325655 - 16325707
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  16325655 agccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaagcaaaa 16325707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 20116658 - 20116598
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaagacaataa 130  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||  ||| |||||||    
T  20116658 agccggattagccgtccacctttgatgggtcggaaaccggtgcgaaagccaaaaacaataa 20116598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 35946798 - 35946850
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  35946798 agccggattagtcgtccaccattggtgggtcggaaactggtgcgaaaggaaaa 35946850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 331492 - 331598
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccacta-----tagccggattagtcgtccacctttggt 95  Q
    |||||| |||||||||||||||||||||||     ||||||||  ||||||||||||||||||  |||      |||||||||||||| |||||||||||    
T  331492 acccggggaataccgggttcgattcccagg-----gggaacaacacttggccagtgcgcatgcttctacgcatgagccggattagtcgcccacctttggt 331586  T
Q  96 gggtcggaaacc 107  Q
    |||| |||||||    
T  331587 gggttggaaacc 331598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 7747334 - 7747381
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  7747334 agccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 7747381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 10026728 - 10026626
Alignment:
Q  4 cggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtggg 98  Q
    |||| ||||||||||||||||| ||||||     |||||| | |||||||||||||||||| |||      |||||||||||||| ||||||||||||||    
T  10026728 cggaaaataccgggttcgattctcagggg-----gaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtcgaccacctttggtggg 10026634  T
Q  99 tcggaaac 106  Q
    ||||||||    
T  10026633 tcggaaac 10026626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 18902576 - 18902529
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  18902576 agccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 18902529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 41032010 - 41031905
Alignment:
Q  12 accgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaac 106  Q
    |||||||||||||||||||||     ||||||  ||||||||||| ||||||| |||      |||||||||||||  ||||||||||||||||||||||    
T  41032010 accgggttcgattcccagggg-----gaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcacccacctttggtgggtcggaaac 41031916  T
Q  107 cggtgcgaaag 117  Q
    | |||||||||    
T  41031915 cagtgcgaaag 41031905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 2550928 - 2550985
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaagacaa 127  Q
    |||||||||||||| |||| |||||||||| | |||||||||||||||||||| ||||    
T  2550928 agccggattagtcgcccacttttggtgggttgaaaaccggtgcgaaagaaaaaaacaa 2550985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 39201554 - 39201513
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtg 111  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  39201554 agccggattagtcgttcacctttggtgggtcggaaaccggtg 39201513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 9360794 - 9360742
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||| |||||||| |||||||| ||||| |||||||||||||||||||||||    
T  9360794 agccgaattagtcgcccacctttagtgggccggaaaccggtgcgaaagaaaaa 9360742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 29422275 - 29422327
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||||| ||||    
T  29422275 agccggattagtcgtccacctttgatggatcggaaatcggtgcgaaagcaaaa 29422327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 42770736 - 42770645
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||| |||||||||||||||||||| ||       |||||||||| ||||||||||||||||||||| |||||| ||| |||| ||||    
T  42770736 gggaacaacgcttggccagtgcgcatgcctcttcgcacgagccggattaatcgtccacctttggtgggtcgaaaaccgatgcaaaagcaaaa 42770645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 44773323 - 44773370
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||  |||||||| |||||||||||||||||||||||    
T  44773323 agccggattagtcgctcacctttgatgggtcggaaaccggtgcgaaag 44773370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 44945653 - 44945700
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||| |||||||| |||| |||||||||||||||||||    
T  44945653 agccggattagtcgcccacctttagtggatcggaaaccggtgcgaaag 44945700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 116
Target Start/End: Complemental strand, 1773686 - 1773644
Alignment:
Q  74 ggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 116  Q
    |||||||||||||||| ||||||||||| ||||||||||||||    
T  1773686 ggattagtcgtccaccattggtgggtcgaaaaccggtgcgaaa 1773644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 11069944 - 11069990
Alignment:
Q  76 attagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||| |||||||||||||||||| |||||||| ||||    
T  11069944 attagtcgtccaccgttggtgggtcggaaaccgatgcgaaagcaaaa 11069990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 44023361 - 44023407
Alignment:
Q  76 attagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  44023361 attagtcgtccatctttggtgggttggaaaccggtgcgaaagcaaaa 44023407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 39807000 - 39806884
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactata-----gccggattagtcgtccacctttggt 95  Q
    |||||| ||||||||||||||||||||| | ||||     ||| | |||||||||||||||||| ||| |     | |||||||||| ||||||||||||    
T  39807000 acccggggaataccgggttcgattcccaagagaaa-----caacgtttggccagtgcgcatgcctctacacacgagtcggattagtcatccacctttggt 39806906  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    || ||  |||||||||||||||    
T  39806905 ggttcataaaccggtgcgaaag 39806884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 45263780 - 45263724
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgcc 64  Q
    |||| ||||||||||||||||||||||     ||||||||| ||||||||||||||||||||    
T  45263780 ccggggaataccgggttcgattcccag-----agggaacaacgcttggccagtgcgcatgcc 45263724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 10046523 - 10046487
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaac 106  Q
    |||||||||||||| ||||||||||||||||||||||    
T  10046523 agccggattagtcgaccacctttggtgggtcggaaac 10046487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 16034997 - 16035049
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||  |||| ||| || |||||||||||||||||||||||||    
T  16034997 agccggattagtcgctcaccattgatgagtcggaaaccggtgcgaaagaaaaa 16035049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 29299353 - 29299385
Alignment:
Q  85 ccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||||||||||||||||||||    
T  29299353 ccacctttggtgggtcggaaaccggtgcgaaag 29299385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 44193546 - 44193590
Alignment:
Q  74 ggattagtcgtccacctttggtgggtcggaaaccggtgcgaaaga 118  Q
    |||||||||| ||||| |||||||||| |||||||||||||||||    
T  44193546 ggattagtcgcccaccattggtgggtcagaaaccggtgcgaaaga 44193590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 3811737 - 3811690
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||| ||| |||||||||||||||| ||||||| ||||||||    
T  3811737 agccggattactcgcccacctttggtgggtcagaaaccgatgcgaaag 3811690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 112
Target Start/End: Original strand, 10669655 - 10669694
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgc 112  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  10669655 cggattaatcgttcacctttggtgggtcggaaaccggtgc 10669694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 117
Target Start/End: Complemental strand, 34346317 - 34346286
Alignment:
Q  86 cacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||||||||||||||    
T  34346317 cacctttggtgggtcggaaaccggtgcgaaag 34346286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 34722740 - 34722787
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||| ||||||||| ||| || ||||||||||||||||    
T  34722740 agccggattagtcgcccacctttgatggatcagaaaccggtgcgaaag 34722787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 37560233 - 37560280
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||| ||||||||||||| ||||||| ||||||||| |||||    
T  37560233 agccggattaatcgtccacctttgatgggtcgaaaaccggtgtgaaag 37560280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 44548770 - 44548723
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||| ||||||||||||||||||| ||| |||||||| ||||||||||    
T  44548770 agccagattagtcgtccacctttgatggatcggaaactggtgcgaaag 44548723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 18649069 - 18649020
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||  ||| |||||||||| |||||||| |||||||||||||    
T  18649069 cggattagtcgctcacttttggtgggttggaaaccgttgcgaaagaaaaa 18649020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 34738376 - 34738327
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||  |||| |||||||||||||||| |||| ||||    
T  34738376 cggattagtcgtccaccaatggtaggtcggaaaccggtgcaaaagcaaaa 34738327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 16813211 - 16813159
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||| ||||||| ||| ||||| | ||||||||| ||||    
T  16813211 agccggattagtcgtccatctttggtaggttggaaatcagtgcgaaaggaaaa 16813159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 16852490 - 16852438
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||| ||||||| ||| ||||| | ||||||||| ||||    
T  16852490 agccggattagtcgtccatctttggtaggttggaaatcagtgcgaaaggaaaa 16852438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 28616425 - 28616373
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||| ||||||||| ||| |||| ||||||| |||||||||||||||| ||||    
T  28616425 agccagattagtcgcccatctttagtgggtcagaaaccggtgcgaaagcaaaa 28616373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 33005827 - 33005863
Alignment:
Q  86 cacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  33005827 cacctttagtgggtcggaaaccgatgcgaaagaaaaa 33005863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 34356204 - 34356311
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    ||||||||||||||||| |||||||     ||||||  ||||| ||||||||||||| ||||     |||||||||| |||| |||| ||| ||||||||    
T  34356204 gaataccgggttcgatttccagggg-----gaacaacacttggtcagtgcgcatgcctctatgcatgagccggattaatcgtgcaccattgatgggtcgg 34356298  T
Q  103 aaaccggtgcgaa 115  Q
    ||||  |||||||    
T  34356299 aaacgagtgcgaa 34356311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 6849 - 6970
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| |||||||||||||||||||||||||     ||||||  ||||||||||||||||||| |||      ||||||||||||||  ||||||||||    
T  6849 acccggggaataccgggttcgattcccagggg-----gaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggt 6943  T
Q  96 gggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||||| ||||    
T  6944 gggtcggaaaccggtgcgaaagcaaaa 6970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 5253338 - 5253217
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| |||||||||||||||||||||||||     ||||||  ||||||||||||||||||| |||      |||||||||| ||| |||||||||||    
T  5253338 acccggggaataccgggttcgattcccagggg-----gaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatcgcccacctttggt 5253244  T
Q  96 gggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||||| ||||    
T  5253243 gggtcggaaaccggtgcgaaagcaaaa 5253217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 3601109 - 3601200
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactata-----gccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||| ||||||||||||||||||||  || |     ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3601109 gggaacaacgcttggccagtgcgcatgcctatacacacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagcaaaa 3601200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 21898645 - 21898759
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| ||||||||||||||||||||||| |     |||||| |||||||||||||||||||| |||      ||||||||||||||| ||||||| ||||    
T  21898645 ccggggaataccgggttcgattcccaggag-----gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgg 21898739  T
Q  98 gtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||    
T  21898740 gtcggaaaccggtgcgaaag 21898759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 9633708 - 9633624
Alignment:
Q  38 gaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||| |||||||||||||||||||| |||      |||||||||||||| |||||||||||||||||||||||||||||||||    
T  9633708 gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 9633624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 30788937 - 30788852
Alignment:
Q  37 ggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||| | |||||||||||||||||| |||      |||||||||||||| |||||||||||||||||||||||||||||||||    
T  30788937 ggaacaacgtttggccagtgcgcatgcctctaggcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 30788852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 8938775 - 8938827
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  8938775 agccgaattagtcgtccacctttgatgggtcggaaaccggtgcgaaagaaaaa 8938827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 6606143 - 6606096
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  6606143 agccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 6606096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 14783466 - 14783419
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  14783466 agccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 14783419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 19089562 - 19089609
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  19089562 agccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaag 19089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 29333246 - 29333133
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    ||||||||||||||||| |||||||||      ||| | |||||||||||||||||| |||      ||||| || ||||||||||||||||| ||||||    
T  29333246 gaataccgggttcgatttccaggggaa------caacgtttggccagtgcgcatgcctctacgcatgagccgaatcagtcgtccacctttggtaggtcgg 29333153  T
Q  103 aaaccggtgcgaaagaaaaa 122  Q
     |||||||||||||||||||    
T  29333152 taaccggtgcgaaagaaaaa 29333133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 116
Target Start/End: Complemental strand, 8149844 - 8149797
Alignment:
Q  69 tagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 116  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  8149844 tagccgaattagtcgtccacctttggtgggttggaaaccggtgcgaaa 8149797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 12635811 - 12635925
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| ||||||| |||| |||||||||||||||     ||| ||||||| |||||||||||| |||      |||||||||||||| ||||  |||||||    
T  12635811 ccggggaataccaggtttgattcccaggggaaa-----caacgcttggctagtgcgcatgcctctacgcacaagccggattagtcgcccactattggtgg 12635905  T
Q  98 gtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||    
T  12635906 gtcggaaaccggtgcgaaag 12635925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 13036089 - 13035998
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||  ||||||||||||||||||| |||      |||| ||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  13036089 gggaacaacacttggccagtgcgcatgcctctacgcatgagccagattagtcgtccactattggtgggtcggaaaccggtgcgaaagcaaaa 13035998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 13584492 - 13584445
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||    
T  13584492 agccggattaatcgtccacctttggtgggtcggaaaccggcgcgaaag 13584445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 29444850 - 29444764
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||| |||||||||||||||||||| |||      |||||||||||| ||||| ||||||||||||||||||  |||||||||    
T  29444850 gggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagttgtccatctttggtgggtcggaaactagtgcgaaag 29444764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 8612018 - 8611973
Alignment:
Q  72 ccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||    
T  8612018 ccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 8611973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 9179778 - 9179730
Alignment:
Q  74 ggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||||||| ||||||| |||| |||||||||||    
T  9179778 ggattagtcgtccacctttggtggatcggaaatcggtccgaaagaaaaa 9179730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 8932658 - 8932772
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| ||||| |||||||||||||||||||     ||||||  |||||| |||||||||||| |||      |||||||||| ||  ||||||||| |||    
T  8932658 ccggggaatatcgggttcgattcccagggg-----gaacaacacttggctagtgcgcatgcctctacgcatgagccggattaatcacccacctttgatgg 8932752  T
Q  98 gtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||    
T  8932753 gtcggaaaccggtgcgaaag 8932772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 8944124 - 8944238
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| ||||| |||||||||||||||||||     ||||||  |||||| |||||||||||| |||      |||||||||| ||  ||||||||| |||    
T  8944124 ccggggaatatcgggttcgattcccagggg-----gaacaacacttggctagtgcgcatgcctctacgcatgagccggattaatcacccacctttgatgg 8944218  T
Q  98 gtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||    
T  8944219 gtcggaaaccggtgcgaaag 8944238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 12606455 - 12606541
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||| | |||||||||||||||||| |||      |||||||||||||| |||||||||||| |  |||||||||||||||||    
T  12606455 gggaacaacgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgagctggaaaccggtgcgaaag 12606541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 31129241 - 31129293
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||| ||||||| || ||||||||||| |||||||||||||||||||| ||||    
T  31129241 agccagattagttgtgcacctttggtgagtcggaaaccggtgcgaaagcaaaa 31129293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 34954665 - 34954613
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||| ||||||||||||||||||| |||||||||||||  |||||||| ||||    
T  34954665 agccagattagtcgtccacctttgatgggtcggaaaccaatgcgaaagcaaaa 34954613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 13468997 - 13469044
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||| ||||||||| ||||| ||||||||| |||||||||||||||||    
T  13468997 agccagattagtcgcccaccattggtgggttggaaaccggtgcgaaag 13469044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 21872971 - 21873014
Alignment:
Q  74 ggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||    
T  21872971 ggattagtcgtccacctttgatgggtcggaaaccagtgcaaaag 21873014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 2271349 - 2271307
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgc 112  Q
    |||||||||||||||||||||||| |||||| |||||| ||||    
T  2271349 agccggattagtcgtccacctttgatgggtcagaaaccagtgc 2271307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 4596185 - 4596230
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaa 115  Q
    |||||||||||||||||||| || |||||| ||||||| |||||||    
T  4596185 agccggattagtcgtccaccattagtgggttggaaaccagtgcgaa 4596230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 11142672 - 11142713
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 116  Q
    ||||||| ||||| ||||||||||||||| ||||||||||||    
T  11142672 gattagttgtccaactttggtgggtcggagaccggtgcgaaa 11142713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 13116173 - 13116129
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||| |||| ||  ||||||||||||||||||||||||||||    
T  13116173 cggattaatcgttcatttttggtgggtcggaaaccggtgcgaaag 13116129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 4479404 - 4479290
Alignment:
Q  7 agaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcg 101  Q
    |||||||||| |||||||||||||||||      ||| |||||||||||||||||||| |||      ||| ||||||||||||||||||||||||||||    
T  4479404 agaataccggattcgattcccaggggaa------caacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggtcg 4479311  T
Q  102 gaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||| |||||    
T  4479310 gaaaccggtgcgaaaaaaaaa 4479290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 6100469 - 6100583
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| ||||||||||||||||||||||| |     |||||| ||||||||||||||||||||||||      ||||||||||||||| ||||||| ||||    
T  6100469 ccggggaataccgggttcgattcccaggag-----gaacaacgcttggccagtgcgcatgccactacgcatgagccggattagtcgttcacctttagtgg 6100563  T
Q  98 gtcggaaaccggtgcgaaag 117  Q
    |||| |||||| ||||||||    
T  6100564 gtcgaaaaccgctgcgaaag 6100583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 43032926 - 43033017
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactata-----gccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||| |||||||||||||||||||| ||| |     ||||||||||||| |||||||||||||||| |||||||||||||||| ||||    
T  43032926 gggaacaacgcttggccagtgcgcatgcctctacacacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagcaaaa 43033017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 15884663 - 15884556
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    |||||||||||||||||||||||||||      |||  |||||| |||||||||||| |||      |||||||||||||| ||||||||||||||||||    
T  15884663 gaataccgggttcgattcccaggggaa------caacacttggcaagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgg 15884570  T
Q  103 aaaccggtgcgaaa 116  Q
    ||||||||||||||    
T  15884569 aaaccggtgcgaaa 15884556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 10927601 - 10927717
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| ||||||||||||||||||| ||| |     |||||| |||||||||||||||||||| |||      ||||||||||||||| ||||||| ||    
T  10927601 acccggggaataccgggttcgattcctaggag-----gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagt 10927695  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||| ||||||||    
T  10927696 gggtcggaaaccgatgcgaaag 10927717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 2467231 - 2467117
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| ||||||||||||||||| |||||||     ||||||  ||||||||||||||||| | ||||     |||||||||||||||||||  ||||||     
T  2467231 ccggggaataccgggttcgatttccagggg-----gaacaactcttggccagtgcgcatgtctctatgcatgagccggattagtcgtccacaattggtgt 2467137  T
Q  98 gtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||    
T  2467136 gtcggaaaccggtgcgaaag 2467117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 4772094 - 4772045
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  4772094 cggattagtcgtccacctttggtgggtcggaaaccggtgcgtaagcaaaa 4772045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 14666184 - 14666070
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccacta-----tagccggattagtcgtccacctttggtgg 97  Q
    |||| ||||||||||||||||||||||||||     |||||  ||||||||||||||||||| |||      |||| ||||||||| ||||  |||||||    
T  14666184 ccggggaataccgggttcgattcccagggga-----aacaacacttggccagtgcgcatgcctctacgcacaagccagattagtcgcccacagttggtgg 14666090  T
Q  98 gtcggaaaccggtgcgaaag 117  Q
    |||| |||||||||||||||    
T  14666089 gtcgaaaaccggtgcgaaag 14666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 45521164 - 45521284
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| |||||||||||||||||||||||||||      |||  ||||  ||||||||||||| |||      ||||||||||||||  |||||||| |    
T  45521164 acccggggaataccgggttcgattcccaggggaa------caacacttgatcagtgcgcatgcctctacgcatgagccggattagtcgctcacctttgat 45521257  T
Q  96 gggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||||| ||||    
T  45521258 gggtcggaaaccggtgcgaaagcaaaa 45521284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 8141104 - 8141213
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    ||||||||||||||||| ||||||||||     ||| |||||||||||||||||||| |||      ||| | ||||||||||||| ||||||||||| |    
T  8141104 gaataccgggttcgatttccaggggaaa-----caacgcttggccagtgcgcatgcctctacgcatgagctgaattagtcgtccacatttggtgggtcag 8141198  T
Q  103 aaaccggtgcgaaag 117  Q
    |||||| ||||||||    
T  8141199 aaaccgatgcgaaag 8141213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 2964142 - 2964187
Alignment:
Q  72 ccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||    
T  2964142 ccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 2964187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 3379855 - 3379806
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  3379855 cggattagtcgtccacttttggtgggtcggaaatcggtgcgaaaaaaaaa 3379806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 24837237 - 24837353
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| |||||||| |||||||||||||||      |||||| ||||||||||||  |||||| |||      ||| ||||||||||||||||||||||    
T  24837237 acccggggaataccgtgttcgattcccaggga-----gaacaacgcttggccagtgttcatgcctctaagcacgagcaggattagtcgtccacctttggt 24837331  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    || |||||||| ||||||||||    
T  24837332 ggatcggaaactggtgcgaaag 24837353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 8997590 - 8997538
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||| |||||||||| || ||||||||||||||||||||||||||||| ||||    
T  8997590 agccagattagtcgttcatctttggtgggtcggaaaccggtgcgaaagcaaaa 8997538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 18374037 - 18374121
Alignment:
Q  38 gaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||| ||||| |||||||||||||| |||      |||||||||||||||||| ||||||||||||| |||||||||| ||||    
T  18374037 gaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccaactttggtgggtcgaaaaccggtgcaaaag 18374121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 23895636 - 23895684
Alignment:
Q  74 ggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||||    
T  23895636 ggattaatcgtccacctttgatgggtcggaaacgggtgcgaaagaaaaa 23895684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 43027369 - 43027421
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||| ||||    
T  43027369 agccggattagtcgtccatctttgatgggtcggaaaccgatgcgaaagcaaaa 43027421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 122
Target Start/End: Complemental strand, 3418554 - 3418507
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||| ||||||| |||||||||||||||| ||||    
T  3418554 gattagtcgtccacctttagtgggtcagaaaccggtgcgaaagcaaaa 3418507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 9860103 - 9859989
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactata-----gccggattagtcgtccacctttggtgggtcgg 102  Q
    |||||||||||||||||||||||||     ||||||  ||||||||||| ||||||| ||| |     ||| ||||||||||||||| ||||||| ||||    
T  9860103 gaataccgggttcgattcccagggg-----gaacaacacttggccagtgtgcatgcctctacacatgagccagattagtcgtccaccattggtggatcgg 9860009  T
Q  103 aaaccggtgcgaaagaaaaa 122  Q
    |||||| ||| |||| ||||    
T  9860008 aaaccgatgcaaaagcaaaa 9859989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38922529 - 38922471
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgcc 64  Q
    |||||| ||||||||||||||||||||||     ||||||||| ||||||||||||||||||||    
T  38922529 acccggggaataccgggttcgattcccag-----agggaacaacgcttggccagtgcgcatgcc 38922471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 13358002 - 13357960
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgc 112  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  13358002 agccggattagtcgtccccctttagtgggtcggaaaccggtgc 13357960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 117
Target Start/End: Original strand, 14846648 - 14846686
Alignment:
Q  79 agtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  14846648 agtcgtccacctttggtgggtcggaaatcggtgcgaaag 14846686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 1653903 - 1653858
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaaga 118  Q
    |||||||||||||||   ||||||||||||||||||||||||||||    
T  1653903 cggattagtcgtccattattggtgggtcggaaaccggtgcgaaaga 1653858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 1742279 - 1742234
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaaga 118  Q
    |||||||||||||||   ||||||||||||||||||||||||||||    
T  1742279 cggattagtcgtccattattggtgggtcggaaaccggtgcgaaaga 1742234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 68144 - 68097
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||| |||| |||||||| |||||||||||||||||| ||||    
T  68144 agccggattaatcgttcacctttgatgggtcggaaaccggtgcaaaag 68097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 993256 - 993299
Alignment:
Q  74 ggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||||||||||| || |||| |||||||||||    
T  993256 ggattagtcgtccacctttggtggttcagaaatcggtgcgaaag 993299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 6042816 - 6042874
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgcc 64  Q
    |||||| ||||||||||||||||||||     || |||||||| ||||||||||||||||||||    
T  6042816 acccggggaataccgggttcgattccc-----aaggggaacaacgcttggccagtgcgcatgcc 6042874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 117
Target Start/End: Complemental strand, 11298297 - 11298266
Alignment:
Q  86 cacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||||||||||||||    
T  11298297 cacctttggtgggtcggaaaccggtgcgaaag 11298266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 122
Target Start/End: Original strand, 17845815 - 17845846
Alignment:
Q  91 ttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||||||||||||||||||||    
T  17845815 ttggtgggtcggaaaccggtgcgaaagaaaaa 17845846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 26570988 - 26571035
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||||||||||| || ||||||||||| || |||||    
T  26570988 agccggattagtcgtccacctttgatgagtcggaaaccgatgtgaaag 26571035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 44893363 - 44893272
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||| |||||||||||| ||||||| |||      |||||||||| |||  |||| ||| |||||||||||||||||| |||||||||    
T  44893363 gggaacaatgcttggccagtgtgcatgcctctacgcacgagccggattaatcgctcacccttgatgggtcggaaaccggtgcaaaagaaaaa 44893272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Complemental strand, 22212560 - 22212514
Alignment:
Q  71 gccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||  |||||||||||| ||| |||||||||||||||    
T  22212560 gccggattagtcgctcacctttggtggttcgaaaaccggtgcgaaag 22212514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 6940627 - 6940672
Alignment:
Q  76 attagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaa 121  Q
    ||||||| |||||||||||||||| |||||||| || |||||||||    
T  6940627 attagtcatccacctttggtgggtaggaaaccgatgtgaaagaaaa 6940672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 16291245 - 16291197
Alignment:
Q  74 ggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||  |||||||||||||||| ||||||||| ||||| ||||    
T  16291245 ggattagtcgctcacctttggtgggtcgaaaaccggtgtgaaagcaaaa 16291197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 36662470 - 36662518
Alignment:
Q  72 ccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaa 120  Q
    ||||||||||||||||| |||  ||| |||||||||| |||||||||||    
T  36662470 ccggattagtcgtccacttttaatggatcggaaaccgatgcgaaagaaa 36662518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 2559334 - 2559423
Alignment:
Q  37 ggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaa 121  Q
    ||||||| |||||||||||||||||||| |||      |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2559334 ggaacaacgcttggccagtgcgcatgcctctacgcacaagccggattactcgtccacctttggtgggtcggaaaccggtgcgaaagaaaa 2559423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 7246731 - 7246640
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||| |||||||||||||||||||| |||      |||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  7246731 gggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaaggaaaa 7246640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 29895785 - 29895899
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| |||||||||||||||||||||||||     ||||||  ||||||||||||||||||| |||      |||||||||||||||||||| |||||||    
T  29895785 ccggggaataccgggttcgattcccagggg-----gaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgg 29895879  T
Q  98 gtcggaaaccggtgcgaaag 117  Q
     |||||||||||||||||||    
T  29895880 ttcggaaaccggtgcgaaag 29895899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 40780946 - 40780861
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 116  Q
    |||||||| |||||| ||||||||||||| |||      |||||||||||||||||||||||||||||||||||||||||||||||    
T  40780946 gggaacaacgcttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 40780861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 38166025 - 38166144
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| |||||| ||||| ||||||||||||     |||||| |||||||||||||||||| | |||      |||||||||||||| |||||||||||||    
T  38166025 ccggggaatactgggttggattcccagggg-----gaacaacgcttggccagtgcgcatggctctacgcacgagccggattagtcgcccacctttggtgg 38166119  T
Q  98 gtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||| ||||    
T  38166120 gtcggaaaccggtgcgaaagcaaaa 38166144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 38075432 - 38075550
Alignment:
Q  4 cggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccacta-----tagccggattagtcgtccacctttggtggg 98  Q
    |||||||||||||||||||||| |||||||     ||||| |||||||||||||||||||| |||      ||||| |||| | ||||||||||||||||    
T  38075432 cggagaataccgggttcgattctcagggga-----aacaacgcttggccagtgcgcatgcctctacgcatgagccgaattaattgtccacctttggtggg 38075526  T
Q  99 tcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||| |||||||| ||||    
T  38075527 tcggaaaccgatgcgaaagcaaaa 38075550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 6779211 - 6779328
Alignment:
Q  5 ggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggt 99  Q
    ||||||||||||||||||||||||||||     ||||||  | ||||||||||||||||| ||||     |||||||||||||||||||||||||||  |    
T  6779211 ggagaataccgggttcgattcccagggg-----gaacaacacctggccagtgcgcatgcctctatgcatgagccggattagtcgtccacctttggtgaat 6779305  T
Q  100 cggaaaccggtgcgaaagaaaaa 122  Q
    ||||| ||| |||||||| ||||    
T  6779306 cggaacccgatgcgaaagcaaaa 6779328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 47078454 - 47078575
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| |||||||||||||||||||||||||     |||||| ||||||||||||| |||||| |||      ||||||||||||||  |||| |||||    
T  47078454 acccggggaataccgggttcgattcccagggg-----gaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgctcaccattggt 47078548  T
Q  96 gggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||| ||||||||| ||||    
T  47078549 gggtcggaaaccagtgcgaaagcaaaa 47078575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 55921030 - 55921151
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| |||||||||||||||||||||||||     ||||||  ||||| ||||||||||||| |||      |||||||||| |||  ||||||||||    
T  55921030 acccggggaataccgggttcgattcccagggg-----gaacaacacttggtcagtgcgcatgcctctacgtatgagccggattaatcgctcacctttggt 55921124  T
Q  96 gggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||||| ||||    
T  55921125 gggtcggaaaccggtgcgaaagcaaaa 55921151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 36145330 - 36145214
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactata-----gccggattagtcgtccacctttggt 95  Q
    |||||| ||||||||||||||||||||||||||||     ||| |||||  ||||||||||||| ||| |     ||||||||||||||||||||||| |    
T  36145330 acccggggaataccgggttcgattcccaggggaaa-----caacgcttgatcagtgcgcatgcctctacacatgagccggattagtcgtccacctttgat 36145236  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    |  |||||||||||||||||||    
T  36145235 gaatcggaaaccggtgcgaaag 36145214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 16450310 - 16450417
Alignment:
Q  15 gggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccgg 109  Q
    ||||||||||||||||||     |||||| ||||||||||||| |||||| |||      |||| ||||||||||||||||||||| |||||||||||||    
T  16450310 gggttcgattcccagggg-----gaacaacgcttggccagtgcacatgcctctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccgg 16450404  T
Q  110 tgcgaaagaaaaa 122  Q
    |||||||| ||||    
T  16450405 tgcgaaagcaaaa 16450417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 52950085 - 52950199
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactatag-----ccggattagtcgtccacctttggtgggtcgg 102  Q
    ||||| |||||||||||||||||||     |||||| |||||||||||||||||| | ||| |      || ||||||||||||||||||||||||||||    
T  52950085 gaatatcgggttcgattcccagggg-----gaacaacgcttggccagtgcgcatgactctacacatgaaccagattagtcgtccacctttggtgggtcgg 52950179  T
Q  103 aaaccggtgcgaaagaaaaa 122  Q
    |||||| |||||||| ||||    
T  52950180 aaaccgatgcgaaagcaaaa 52950199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 6032689 - 6032643
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 116  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  6032689 agccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaa 6032643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 49260750 - 49260664
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||| |||||||||||||||||||| |||      |||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  49260750 gggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgaccacctttggtgggtcggaaatcggtgcaaaag 49260664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 4738689 - 4738730
Alignment:
Q  76 attagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4738689 attagtcgtccacctttggtgggtcggaaaccggtgcgaaag 4738730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 8889087 - 8889128
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8889087 agccggattagtcgtccacctttggtgggtcggaaaccggtg 8889128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 29588740 - 29588848
Alignment:
Q  9 aataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccacta-----tagccggattagtcgtccacctttggtgggtcgga 103  Q
    |||||||||||||||||||||||||     ||||||||||||| |||||||||||| |||      ||||||||||||  |||||| |||||||||||||    
T  29588740 aataccgggttcgattcccagggga-----aacaaagcttggctagtgcgcatgcctctacgcacgagccggattagttatccaccattggtgggtcgga 29588834  T
Q  104 aaccggtgcgaaag 117  Q
    || || ||||||||    
T  29588835 aatcgatgcgaaag 29588848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 42722661 - 42722576
Alignment:
Q  37 ggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||| |||||||||||||||||||| |||      ||||||||||||||| ||||||| |||||||| |||||||||||||||    
T  42722661 ggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccggtgcgaaag 42722576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 53599056 - 53599172
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| ||||||||||||||||||||||| |     |||||| | |||||||||||||||||| |||      |||||||||| |||| ||||||| ||    
T  53599056 acccggggaataccgggttcgattcccaggag-----gaacaacgtttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttagt 53599150  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    || |||||||||||||||||||    
T  53599151 ggatcggaaaccggtgcgaaag 53599172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 2686501 - 2686449
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  2686501 agccgaattagtcgtccaccttttgtgggttggaaaccggtgcgaaagaaaaa 2686449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 3159582 - 3159463
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccacta-----tagccggattagtcgtccacctttggtgg 97  Q
    |||||||||||||||||||| | |||||||     |||||| |||||||||||||||||||| |||      |||| |||||||||  |||| |||||||    
T  3159582 ccggagaataccgggttcgacttccagggg-----gaacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctcaccattggtgg 3159488  T
Q  98 gtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||| |||| ||||    
T  3159487 gtcggaaaccggtgcaaaagcaaaa 3159463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 21429374 - 21429418
Alignment:
Q  78 tagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  21429374 tagtcgtccacctttggtgggtcggaaaccggtgcgaatgaaaaa 21429418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 47682428 - 47682376
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  47682428 agccgggttagtcgcccacctttggtgggtcggaaaccggtgcgaaagcaaaa 47682376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 5472930 - 5472847
Alignment:
Q  39 aacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||| |||||||||||||||||||| |||      |||||||||||||| ||||||||||||||||| |||| ||||||||||    
T  5472930 aacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaactggtgcgaaag 5472847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 36262880 - 36262766
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccacta-----tagccggattagtcgtccacctttggt 95  Q
    |||||||||||||||||||||||||||       ||||||||| ||||||||||||| |||||| |||      || ||||||||||| |||||||||||    
T  36262880 acccggagaataccgggttcgattccc-------agggaacaacgcttggccagtgcacatgcctctacgcacgagtcggattagtcgcccacctttggt 36262788  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    ||||| ||||||  ||||||||    
T  36262787 gggtcagaaaccaatgcgaaag 36262766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 3507269 - 3507371
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactata-----gccggattagtcgtccacctttggtgg 97  Q
    |||||||||| |||||||||||||||      ||||||||| ||||||| ||||||| |||| ||| |     |||||||||||||||||||||||||||    
T  3507269 ccggagaatatcgggttcgattccca------agggaacaacgcttggctagtgcgcgtgcctctacacacgagccggattagtcgtccacctttggtgg 3507362  T
Q  98 gtcggaaac 106  Q
     ||||||||    
T  3507363 atcggaaac 3507371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 43458648 - 43458725
Alignment:
Q  45 gcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||||||| |||      |||||||||||||||||||||||| || ||||||||||| ||||||||    
T  43458648 gcttggccagtgcgcatgcctctacggacgagccggattagtcgtccacctttgatgagtcggaaaccgttgcgaaag 43458725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 43468343 - 43468459
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| |||||||||||||||||||||||||     |||||| ||||||||||||| |||  | |||      |||||||||||||| |||||  ||||    
T  43468343 acccggggaataccgggttcgattcccagggg-----gaacaacgcttggccagtgcacatttctctacgcatgagccggattagtcgcccaccagtggt 43468437  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    |||||||| |||||||||||||    
T  43468438 gggtcggagaccggtgcgaaag 43468459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 48834743 - 48834694
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  48834743 cggattagtcgcctacctttggtgggtcggaaaccggtgcgaaagcaaaa 48834694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 114
Target Start/End: Complemental strand, 1940823 - 1940779
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcga 114  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||    
T  1940823 agccggattagtcgcccacctttggtgggtcgaaaaccggtgcga 1940779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 14567304 - 14567356
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||  | |||||||||||||||||| ||||||||||||||||    
T  14567304 agccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaagaaaaa 14567356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 122
Target Start/End: Original strand, 16645188 - 16645235
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  16645188 gattagtcgcccacctgtggtgggtcggaaaccggtgcgaaagcaaaa 16645235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 17080069 - 17080160
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||| |||||||||||||||||||| |||      ||||||||||||||  |||||||| ||| ||| ||||||||||||||| ||||    
T  17080069 gggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcacacctttgatggatcgaaaaccggtgcgaaagcaaaa 17080160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 20128307 - 20128421
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| |||||| ||||||||||| ||||||     |||||| ||||||||||||||||||||  ||      |||  ||||||||||||||| |||||||    
T  20128307 ccggggaatactgggttcgattctcagggg-----gaacaatgcttggccagtgcgcatgcctttacgcacgagctagattagtcgtccaccattggtgg 20128401  T
Q  98 gtcggaaaccggtgcgaaag 117  Q
    ||| ||||||||||||||||    
T  20128402 gtcagaaaccggtgcgaaag 20128421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 38168321 - 38168368
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||| ||||||| |||||| |||||||||||||||||    
T  38168321 agccggattagtcgttcacctttagtgggttggaaaccggtgcgaaag 38168368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 41074695 - 41074648
Alignment:
Q  158 tacaattggtttataaaatgaaaaggaggtgatttgagctacccattt 205  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||||||    
T  41074695 tacaattggtttataaaatgaaaaagaggtgaattgagttacccattt 41074648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 14124019 - 14124128
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactata-----gccggattagtcgtccacctttggtgggtcgg 102  Q
    ||||||| |||||||||||||||||     ||||||   |||||||||||||||||| ||| |     |||||||||||||  |||| ||||||||| ||    
T  14124019 gaataccaggttcgattcccagggg-----gaacaacatttggccagtgcgcatgcctctacacacgagccggattagtcgctcaccattggtgggttgg 14124113  T
Q  103 aaaccggtgcgaaag 117  Q
    |||||||||||||||    
T  14124114 aaaccggtgcgaaag 14124128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 18531589 - 18531631
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||| |||||||||||| ||||||||||||||||||||||||    
T  18531589 gattattcgtccaccttttgtgggtcggaaaccggtgcgaaag 18531631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 25406604 - 25406562
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||| |||||||| |||||||||||||||||||||||    
T  25406604 gattagtcgttcacctttgatgggtcggaaaccggtgcgaaag 25406562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 42722493 - 42722374
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| |||||||||||| ||||||||||||||      |||  |||| ||||||||||| || ||||     || |||||||||||||||||  ||||    
T  42722493 acccggggaataccgggtttgattcccaggggaa------caacacttgaccagtgcgcatacctctatgcatgagtcggattagtcgtccaccaatggt 42722400  T
Q  96 gggtcggaaaccggtgcgaaagaaaa 121  Q
    |||||| ||| |||||||||||||||    
T  42722399 gggtcgaaaatcggtgcgaaagaaaa 42722374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 13073608 - 13073649
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 116  Q
    ||||||||||  ||||||||||||||||||||||||||||||    
T  13073608 gattagtcgtttacctttggtgggtcggaaaccggtgcgaaa 13073649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 27531713 - 27531664
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||| ||||||||||||||||||||||||||| |||||| ||||| ||||    
T  27531713 cggaatagtcgtccacctttggtgggtcggaagccggtgtgaaagcaaaa 27531664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 45721154 - 45721198
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||    
T  45721154 cggattagtcgtccacctttaatgggttggaaaccggtgcgaaag 45721198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 54946314 - 54946366
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||| ||| | ||||||||||||||||||| | ||||||||||    
T  54946314 agccggattagtcgcccatcattggtgggtcggaaaccggcgtgaaagaaaaa 54946366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 122
Target Start/End: Complemental strand, 295574 - 295527
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||| |||||||||  |||||||||||||| ||||||    
T  295574 gattagtcgtccaccgttggtgggtttgaaaccggtgcgaatgaaaaa 295527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 1446824 - 1446910
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccacta-----tagccggattagtcgtccacc 89  Q
    |||| |||||||||||||||||||||||     ||||||||  ||||||||||||||||||| |||      ||||||||||||||||||||    
T  1446824 ccggggaataccgggttcgattcccagg-----gggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 1446910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 15829764 - 15829811
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||| |||||| ||||||| || ||||||||||||||||    
T  15829764 agccggattagtcctccaccattggtggatcagaaaccggtgcgaaag 15829811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 24166453 - 24166567
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    |||||| |||||||||||||| ||||||     ||| | |||||||||||||||||| |||      |||| ||||||||  ||||||||| ||| ||||    
T  24166453 gaatactgggttcgattcccaagggaaa-----caacgtttggccagtgcgcatgcctctacgcacgagccagattagtcacccacctttgatggatcgg 24166547  T
Q  103 aaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||| ||||    
T  24166548 aaaccggtgcgaaagcaaaa 24166567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 30317298 - 30317345
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||| |||||||| |||||||||||||||||||||||| || |||||    
T  30317298 agccgaattagtcgcccacctttggtgggtcggaaaccgatgtgaaag 30317345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 122
Target Start/End: Original strand, 33176084 - 33176131
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||||| || ||||||| ||||||||| ||||    
T  33176084 gattagtcgtccacctttggtgagttggaaaccagtgcgaaagcaaaa 33176131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 14858780 - 14858822
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||    
T  14858780 gattattcgtccacctttgatgggtcagaaaccggtgcgaaag 14858822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 33647791 - 33647832
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 116  Q
    |||||||||| || ||||||||| ||||||||||||||||||    
T  33647791 gattagtcgttcatctttggtggatcggaaaccggtgcgaaa 33647832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 49952192 - 49952139
Alignment:
Q  70 agccggattagtcgtc-cacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||   |||||||| ||||| ||||||||||||||||||||||    
T  49952192 agccggattagtcgcgtcacctttgatgggttggaaaccggtgcgaaagaaaaa 49952139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 4986261 - 4986305
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||| ||||||| |||||| ||||| ||||||||||    
T  4986261 cggattagtcgtctacctttgatgggtcagaaactggtgcgaaag 4986305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 14597942 - 14597894
Alignment:
Q  74 ggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||| ||| ||| |||||||||| |||| ||||    
T  14597942 ggattagtcgtccacctttgatggatcgaaaaccggtgcaaaagcaaaa 14597894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 27248491 - 27248543
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||| ||||||||| ||||||||||| |||| ||||| |||| ||||||||||    
T  27248491 agccagattagtcgcccacctttggtaggtcagaaactggtgtgaaagaaaaa 27248543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 31588751 - 31588799
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaaga 118  Q
    ||||||||||||||  ||| |||||||| |||||||||| |||||||||    
T  31588751 agccggattagtcgctcacttttggtggatcggaaaccgatgcgaaaga 31588799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 33175413 - 33175457
Alignment:
Q  78 tagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||||||| || ||||||| ||||||||| ||||    
T  33175413 tagtcgtccacctttggtgagttggaaaccagtgcgaaagcaaaa 33175457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 46108756 - 46108808
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||| |||||||||||||| |||| |||||||||||||| ||| ||| |||||    
T  46108756 agccagattagtcgtccacttttgatgggtcggaaaccgatgcaaaaaaaaaa 46108808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 37339811 - 37339928
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| |||||||||||||||||||||||||    || |||| |||||||||||||||||||| | |      |||||||||||||| |||||||||||    
T  37339811 acccggggaataccgggttcgattcccagggg----gggacaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgcccacctttggt 37339906  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    |||| |||||||||||||||||    
T  37339907 gggttggaaaccggtgcgaaag 37339928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 45361991 - 45361882
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    |||||||||||||||||| |||| |     |||||| ||||||||||||||||||||||||      ||||||||||||||| ||||||| |||||||||    
T  45361991 gaataccgggttcgattctcaggag-----gaacaacgcttggccagtgcgcatgccactacgcataagccggattagtcgttcacctttagtgggtcgg 45361897  T
Q  103 aaaccggtgcgaaag 117  Q
    |||||||||||||||    
T  45361896 aaaccggtgcgaaag 45361882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 8763983 - 8764099
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| ||||| |||||||| ||||||||||     ||||||  ||||||||||||||||||| |||      |||||||||||||||||||| |||||    
T  8763983 acccggggaatatcgggttcgtttcccagggg-----gaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgtccaccgttggt 8764077  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||||    
T  8764078 gggtcggaaaccggtgcgaaag 8764099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 17642112 - 17642004
Alignment:
Q  9 aataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgga 103  Q
    ||||| ||||||||||||||||||     ||||||  ||||||||||||||||||| |||      ||||||||||||||||||||||||||||||||||    
T  17642112 aatactgggttcgattcccagggg-----gaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcgga 17642018  T
Q  104 aaccggtgcgaaag 117  Q
    ||| ||||||||||    
T  17642017 aactggtgcgaaag 17642004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33418231 - 33418125
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||||||||||||| ||||||||| |||||     | |||| |||||||||||||||||||| ||||     ||||||||||||||||||||||||||    
T  33418231 acccggagaataccggattcgattcctagggg-----ggacaacgcttggccagtgcgcatgcctctatgcacgagccggattagtcgtccacctttggt 33418137  T
Q  96 gggtcggaaacc 107  Q
     |||||||||||    
T  33418136 cggtcggaaacc 33418125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 41663970 - 41663856
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| |||||||||||||||||||||||||     ||||||  ||||| ||||||||||||| |||      ||| |||||||||||||||| |||||||    
T  41663970 ccggggaataccgggttcgattcccagggg-----gaacaacacttggtcagtgcgcatgcctctacgcatgagctggattagtcgtccaccattggtgg 41663876  T
Q  98 gtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||    
T  41663875 gtcggaaaccggtgcgaaag 41663856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 49078108 - 49078222
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| ||||||||||||||||||||||||||||     |||  ||||||||||||||||||| |||      ||||||||||||||| |||| ||||| |    
T  49078108 ccggggaataccgggttcgattcccaggggaaa-----caacacttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtag 49078202  T
Q  98 gtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||    
T  49078203 gtcggaaaccggtgcgaaag 49078222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 46 - 122
Target Start/End: Complemental strand, 4581758 - 4581677
Alignment:
Q  46 cttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||||||| |||      ||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  4581758 cttggccagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaaagcaaaa 4581677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 43959937 - 43959821
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| ||||| ||||||| |||||||||||     |||||| |||||||||||||||||||| |||      |||||||||||||| |||||||| ||    
T  43959937 acccggggaatatcgggttcaattcccagggg-----gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttagt 43959843  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    || |||||||||||||||||||    
T  43959842 ggatcggaaaccggtgcgaaag 43959821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 9659226 - 9659174
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  9659226 agccggattagtcgtccacctttggtgggttggaaaccggtgcgaaagcaaaa 9659174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 51437518 - 51437570
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  51437518 agccggattagtcatccacctttggtgggtcggaaaccggtgcgaaagcaaaa 51437570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 26325873 - 26325920
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  26325873 agccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 26325920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 5855521 - 5855630
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    ||||||||||||||||||||||| |     |||||| |||||||||||||||||||| |||      || |||||||||||| ||||||| |||||||||    
T  5855521 gaataccgggttcgattcccaggag-----gaacaacgcttggccagtgcgcatgcctctacgcatgaggcggattagtcgttcacctttagtgggtcgg 5855615  T
Q  103 aaaccggtgcgaaag 117  Q
    |||||| ||||||||    
T  5855616 aaaccgatgcgaaag 5855630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 10422811 - 10422901
Alignment:
Q  37 ggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||  ||||||||||||||||||| |||      ||||||||||||||||||||||||||  |||||||||||||||||||| ||||    
T  10422811 ggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtaagtcggaaaccggtgcgaaagcaaaa 10422901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 10173055 - 10172966
Alignment:
Q  38 gaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||| ||||||||||||| |||||| |||      |||||||||| ||| ||||||||||||||||||||||||||||||||| ||||    
T  10173055 gaacaacgcttggccagtgcccatgcctctacgcatgagccggattactcgcccacctttggtgggtcggaaaccggtgcgaaagcaaaa 10172966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 11397933 - 11397884
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  11397933 cggattagtcgtccacctttggtgggtcggaaatcggtgcgaaagcaaaa 11397884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18915859 - 18915975
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| |||||||||||||||||||||||||     ||||||  ||||||||||| ||||||| |||      ||||||||||||||  |||| |||||    
T  18915859 acccggggaataccgggttcgattcccagggg-----gaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgctcaccattggt 18915953  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    |||| |||||||||||||||||    
T  18915954 gggttggaaaccggtgcgaaag 18915975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 5504092 - 5504144
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  5504092 agccggattagtcgtccacctttgatgggtcggaaaccggtacgaaagtaaaa 5504144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 26660199 - 26660250
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  26660199 agccggattagtcg-ccacctttggtgggtcggaaaccggtgcgaaagcaaaa 26660250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 50371881 - 50371829
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  50371881 agccggattagtcgcccatctttggtggatcggaaaccggtgcgaaagaaaaa 50371829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 2567271 - 2567389
Alignment:
Q  4 cggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtggg 98  Q
    |||||||||||||||||||||  | |||||||    |||| |||||||||||||||||||| |||      || | |||||| |||||| ||||||||||    
T  2567271 cggagaataccgggttcgattttc-ggggaaa----acaacgcttggccagtgcgcatgcctctactcacgagtcagattagccgtccatctttggtggg 2567365  T
Q  99 tcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||| |||||||||||    
T  2567366 tcggaaaccggtacgaaagaaaaa 2567389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 892406 - 892302
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactatagccggattagtcgtccacctttggtgggtcggaaacc 107  Q
    ||||||||||||||||||| |||||     ||||||  ||| |||| || ||||||| |   |||||||||||||| ||||||||||||| ||||||| |    
T  892406 gaataccgggttcgattcctagggg-----gaacaacacttagccaatgtgcatgccgcatgagccggattagtcgcccacctttggtggatcggaaatc 892312  T
Q  108 ggtgcgaaag 117  Q
    ||||||||||    
T  892311 ggtgcgaaag 892302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 16263568 - 16263653
Alignment:
Q  37 ggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||| |||||||||||||||||||| |||      ||||||| ||||||||||| |||| ||| |||||||||||||||||||    
T  16263568 ggaacaacgcttggccagtgcgcatgcctctacgcataagccggaatagtcgtccacttttgatggatcggaaaccggtgcgaaag 16263653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 35211213 - 35211172
Alignment:
Q  76 attagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  35211213 attagtcgtccacctttggtgggtcggaaaccggtgtgaaag 35211172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 6899619 - 6899671
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||| ||||||||| ||| ||||||||||||||||||| ||||    
T  6899619 agccggattagtcgcccacctttgatggatcggaaaccggtgcgaaagcaaaa 6899671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 30927774 - 30927722
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| |||| ||||    
T  30927774 agccggattagtcgtccacttttggtgggtcagaaaccggtgcaaaagcaaaa 30927722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 45726480 - 45726428
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||| |||||||||||| ||||| || |||||||||||||||    
T  45726480 agccggattagtcgttcacctttggtggatcggagactggtgcgaaagaaaaa 45726428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 8905237 - 8905161
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactatagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaa 119  Q
    |||||||| ||||||||||||||||||       |||| ||||| ||| ||||||||| | |||||||||||||||||||||||    
T  8905237 gggaacaacgcttggccagtgcgcatg-------agccagattaatcgaccacctttgattggtcggaaaccggtgcgaaagaa 8905161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 107
Target Start/End: Complemental strand, 14254315 - 14254278
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaacc 107  Q
    |||||||||||||||||||||||| |||||||||||||    
T  14254315 agccggattagtcgtccacctttgatgggtcggaaacc 14254278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 19195433 - 19195474
Alignment:
Q  81 tcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  19195433 tcgtccacctttgatgagtcggaaaccggtgcgaaagaaaaa 19195474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 3850786 - 3850742
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||    
T  3850786 cggattagtcgcccacctttaatgggtcggaaaccggtgcgaaag 3850742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 16956527 - 16956579
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||   |||||||||||||||||||||| ||||||||| ||||    
T  16956527 agccggattagtcactcacctttggtgggtcggaaaccagtgcgaaagcaaaa 16956579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 114
Target Start/End: Complemental strand, 17092524 - 17092480
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcga 114  Q
    |||||||||||||||||||||||||| | || |||||||||||||    
T  17092524 agccggattagtcgtccacctttggtagatcagaaaccggtgcga 17092480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 31576594 - 31576542
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||| ||||||||||| ||||| || ||||||||||||||| |||||||||    
T  31576594 agccggcttagtcgtccatctttgatgtgtcggaaaccggtgcaaaagaaaaa 31576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 34878627 - 34878675
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaaga 118  Q
    |||||||||||||  ||||||||| ||||||||||| ||||||||||||    
T  34878627 agccggattagtcacccacctttgatgggtcggaaatcggtgcgaaaga 34878675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 44969688 - 44969772
Alignment:
Q  38 gaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||| |||||||||||| ||||||| |||      |||||||||||||||||| | ||||||| ||||||||||||| |||||    
T  44969688 gaacaacgcttggccagtgtgcatgcccctacgcatgagccggattagtcgtccatcattggtggatcggaaaccggtgtgaaag 44969772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 50094968 - 50095012
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||    
T  50094968 cggattagtcgtccaccattagtgggtcggaaaccggtgcaaaag 50095012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 50503475 - 50503356
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| ||||| |||||||||||||||||||     ||||||  |||| |||||||||||||| |||      ||||||||| |||| |||||  ||||||    
T  50503475 ccggggaatatcgggttcgattcccagggg-----gaacaacacttgaccagtgcgcatgcctctacgcacgagccggatttgtcgcccaccaatggtgg 50503381  T
Q  98 gtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||| |||||||| ||||    
T  50503380 gtcggaaaccgatgcgaaagcaaaa 50503356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 18649438 - 18649347
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||| ||||| |||||||||||||| |||      |||| ||||| ||| |||||||| |||| | ||||||||||||||||||||||    
T  18649438 gggaacaacgcttgaccagtgcgcatgcctctacgtacgagccagattaatcgcccacctttagtggattggaaaccggtgcgaaagaaaaa 18649347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 14357818 - 14357868
Alignment:
Q  72 ccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||| ||||  ||| ||| ||||||||||||||||||||||||||||    
T  14357818 ccggattaatcgtttaccattgatgggtcggaaaccggtgcgaaagaaaaa 14357868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 33498916 - 33498834
Alignment:
Q  45 gcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||| |||      |||||||||||||||||||||||| ||| ||| ||| |||| |||||| ||||    
T  33498916 gcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttgatggatcgtaaagcggtacgaaagcaaaa 33498834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 34334409 - 34334352
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgcca 65  Q
    |||| |||||||||||||||||||||||     ||||||||  ||||||||||||||||||||    
T  34334409 ccggggaataccgggttcgattcccagg-----gggaacaacacttggccagtgcgcatgcca 34334352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 34719842 - 34719884
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||  ||||||||||||||||||||| ||||||||||    
T  34719842 gattagtcgctcacctttggtgggtcggaaactggtgcgaaag 34719884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 40702585 - 40702627
Alignment:
Q  80 gtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||    
T  40702585 gtcgcccacctttgatgggtcggaaaccggtgcgaaagcaaaa 40702627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 45536784 - 45536830
Alignment:
Q  71 gccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||| |||||  || |||||||||||||||||||||||    
T  45536784 gccggattagtcgcccaccaatgatgggtcggaaaccggtgcgaaag 45536830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 2980975 - 2980926
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||  ||| |||||||||||| ||||||||||| ||||    
T  2980975 cggattagtcgtccatgtttagtgggtcggaaatcggtgcgaaagcaaaa 2980926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 70 - 107
Target Start/End: Original strand, 10507759 - 10507796
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaacc 107  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  10507759 agccggattagtcgtccaccactggtgggtcggaaacc 10507796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 32142893 - 32142841
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||| ||||||||  |||||||| |||||||||||||| |||||||| ||||    
T  32142893 agccgaattagtcgctcacctttgatgggtcggaaaccgatgcgaaagcaaaa 32142841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 35908819 - 35908864
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||||||| |  ||||||||||||||||||| ||||    
T  35908819 agccggattagtcgtccaccat--gtgggtcggaaaccggtgcaaaag 35908864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 47084223 - 47084171
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||| |  |||| |||||||||| ||||||||||||||||| ||||    
T  47084223 agccggattagccacccacttttggtgggttggaaaccggtgcgaaagcaaaa 47084171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 8809 - 8700
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    |||||||||||||||||||||||||     |||||| ||||||||||||||| |||| |||      ||| |||||||||||||||||||||||||||||    
T  8809 gaataccgggttcgattcccagggg-----gaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcgg 8715  T
Q  103 aaaccggtgcgaaag 117  Q
    |||| ||||||||||    
T  8714 aaactggtgcgaaag 8700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 35315947 - 35316068
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||||||||| |||||||||||||||||||     ||||||  ||||||||||||||||||| |||      ||| |||||||||| |||| ||||||    
T  35315947 acccggagaatatcgggttcgattcccagggg-----gaacaacacttggccagtgcgcatgcctctacgcatgagctggattagtcgcccacttttggt 35316041  T
Q  96 gggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||| |||||||||||||    
T  35316042 gggtcggaaaccgatgcgaaagaaaaa 35316068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 28572327 - 28572211
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||| |||||| |||||||||||||||||||||     ||| |||||||||||  ||||||| |||      |||||||||||||| |||||||||||    
T  28572327 acccggggaatactgggttcgattcccaggggaaa-----caacgcttggccagtatgcatgcctctacgcacgagccggattagtcgcccacctttggt 28572233  T
Q  96 gggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||||    
T  28572232 gggtcggaaaccggtgcgaaag 28572211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 19147025 - 19147073
Alignment:
Q  74 ggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19147025 ggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 19147073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 47219137 - 47219251
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| ||||||| ||||||||||||| ||||||     ||| ||||||| |||||||||||| |||      |||||||||||||||||||||||| |||    
T  47219137 ccggggaataccaggttcgattcccaagggaaa-----caacgcttggctagtgcgcatgcctctacgcatgagccggattagtcgtccacctttgatgg 47219231  T
Q  98 gtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||    
T  47219232 gtcggaaaccggtgcgaaag 47219251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 29762231 - 29762153
Alignment:
Q  46 cttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaa 119  Q
    ||||||||||||||||||| ||||     ||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  29762231 cttggccagtgcgcatgcctctatgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagaa 29762153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 54261224 - 54261333
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    ||||||||||||||||||| ||| |     |||||| |||||||||||||||||||| |||      ||||||||||||||| ||||||| |||||||||    
T  54261224 gaataccgggttcgattcctaggag-----gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcgg 54261318  T
Q  103 aaaccggtgcgaaag 117  Q
    |||||||||||||||    
T  54261319 aaaccggtgcgaaag 54261333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 7328843 - 7328950
Alignment:
Q  9 aataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgcc--act-at-agccggattagtcgtccacctttggtgggtcggaa 104  Q
    ||||||||||||||||||||||||     ||||||  |||||||||||||||||||  ||  || |||||||||||||| ||||||||||||||||| ||    
T  7328843 aataccgggttcgattcccagggg-----gaacaacacttggccagtgcgcatgccttacgcatgagccggattagtcgcccacctttggtgggtcgaaa 7328937  T
Q  105 accggtgcgaaag 117  Q
    |||||||||||||    
T  7328938 accggtgcgaaag 7328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 25294991 - 25295067
Alignment:
Q  46 cttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||| ||||     |||||||||||||||||||| ||||||||| |||||||||||||||||    
T  25294991 cttggccagtgcgcatgcctctatgcatgagccggattagtcgtccaccattggtgggttggaaaccggtgcgaaag 25295067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 36043721 - 36043674
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  36043721 agccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 36043674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 47471830 - 47471938
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    |||||||||||||||||||||||||||      ||| ||||||| |||||||||||  |||      ||||| |||||||||||||||||||||||||||    
T  47471830 gaataccgggttcgattcccaggggaa------caatgcttggctagtgcgcatgcttctacgcatgagccgaattagtcgtccacctttggtgggtcgg 47471923  T
Q  103 aaaccggtgcgaaag 117  Q
    |||||| ||||||||    
T  47471924 aaaccgatgcgaaag 47471938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 49021250 - 49021203
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  49021250 agccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 49021203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 3507620 - 3507534
Alignment:
Q  35 agggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 116  Q
    |||||||||  ||||||||||||||||||| |||      ||||||||||||||  |||||||||||||||||||||||||||||||    
T  3507620 agggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 3507534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 3136738 - 3136694
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  3136738 cggattagtcgtccacctttggttggtcggaaaccggtgcgaaag 3136694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 7650287 - 7650339
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||| ||||    
T  7650287 agccggattagtcgcccacctttggtgggttggaaaccggtgcgaaagcaaaa 7650339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 10040577 - 10040668
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||| |||||||||||||||||||| |||      ||||||| | |||||||||||||||||||| ||||||||||||| || |||||    
T  10040577 gggaacaacgcttggccagtgcgcatgcctctacgcacgagccggaatggtcgtccacctttggtgggttggaaaccggtgcggaaaaaaaa 10040668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 15320246 - 15320293
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||    
T  15320246 agccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 15320293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 29127979 - 29128026
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||    
T  29127979 agccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaag 29128026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 29135906 - 29136020
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| ||||||||| |||||||||||||||     ||||||  ||||||||||||||||||| |||      ||||||||||||| |||||| |||||||    
T  29135906 ccggggaataccggattcgattcccagggg-----gaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcttccaccattggtgg 29136000  T
Q  98 gtcggaaaccggtgcgaaag 117  Q
    || |||||||||| ||||||    
T  29136001 gttggaaaccggtacgaaag 29136020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 45877447 - 45877561
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgg 97  Q
    |||| ||||||||||||||||| ||||||||||     |||  |||||||||||| |||||| |||      ||||||||||||||| |||| ||| |||    
T  45877447 ccggggaataccgggttcgatttccaggggaaa-----caacacttggccagtgcacatgcctctacgcatgagccggattagtcgttcaccattgatgg 45877541  T
Q  98 gtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||||||||    
T  45877542 gtcggaaaccggtgcgaaag 45877561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 51060324 - 51060281
Alignment:
Q  74 ggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  51060324 ggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 51060281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 107
Target Start/End: Complemental strand, 8683287 - 8683250
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaacc 107  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8683287 agccggattagtcgtccacctttggtgggtcggaaacc 8683250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 30767294 - 30767242
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||| ||||    
T  30767294 agccggattagtcgcccacctttggtgggtcggaaactagtgcgaaagtaaaa 30767242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 51683068 - 51682949
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactata-----gccggattagtcgtccacctttggtgg 97  Q
    |||| ||||||| |||||||||||||||||     |||||| ||||| |||||||||||||| ||  |     ||||||||||||| |||||  ||||||    
T  51683068 ccggggaataccaggttcgattcccagggg-----gaacaacgcttgaccagtgcgcatgcctctccacacgagccggattagtcgcccaccaatggtgg 51682974  T
Q  98 gtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||| |||||||| |||||    
T  51682973 gtcggaaaccagtgcgaaaaaaaaa 51682949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 13893986 - 13894033
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||| ||||||||||||| ||| |||||||||||||||    
T  13893986 agccggattagtcgcccacctttggtggatcgaaaaccggtgcgaaag 13894033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 41630626 - 41630512
Alignment:
Q  3 ccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactata-----gccggattagtcgtccacctttggtgg 97  Q
    ||||| |||||||||||| ||||||| |||     |||||| ||||| |||||||||||||| ||| |     ||||||||||||| ||||||||||| |    
T  41630626 ccggaaaataccgggttcaattcccaaggg-----gaacaacgcttgcccagtgcgcatgcctctacacatgagccggattagtcgcccacctttggttg 41630532  T
Q  98 gtcggaaaccggtgcgaaag 117  Q
    ||||||||| |||| |||||    
T  41630531 gtcggaaactggtgtgaaag 41630512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 122
Target Start/End: Complemental strand, 45450489 - 45450442
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||||||| || || ||||||||||||||||||||||    
T  45450489 gattagtcgtccacctttgatgagttggaaaccggtgcgaaagaaaaa 45450442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 47749213 - 47749105
Alignment:
Q  8 gaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcgg 102  Q
    ||||||||||||||||||| |||||||      |||  ||||||||||||||||||| |||      ||||| |||||||| ||||||||||| ||||||    
T  47749213 gaataccgggttcgattcctaggggaa------caactcttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccacctttggtaggtcgg 47749120  T
Q  103 aaaccggtgcgaaag 117  Q
    |||||| ||||||||    
T  47749119 aaaccgatgcgaaag 47749105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 54237508 - 54237555
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||| ||||||||||| || ||||||||||||||||||||||||    
T  54237508 agccggataagtcgtccaccattagtgggtcggaaaccggtgcgaaag 54237555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 31072869 - 31072990
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggt 95  Q
    |||||||||||||| ||||||||| |||||||     |||||| |||||| |||||| |||||| |||      | || ||||| |||||||||||||||    
T  31072869 acccggagaataccaggttcgatttccagggg-----gaacaacgcttggtcagtgcacatgcctctacgcacgacccagattaatcgtccacctttggt 31072963  T
Q  96 gggtcggaaaccggtgcgaaagaaaaa 122  Q
     ||| ||||||||||||||||| ||||    
T  31072964 aggttggaaaccggtgcgaaagcaaaa 31072990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 53649787 - 53649833
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 116  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  53649787 agccggattagtcgttcacctttgatggatcggaaaccggtgcgaaa 53649833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 44064606 - 44064651
Alignment:
Q  72 ccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||    
T  44064606 ccggattagtcgctcacctttggtgggtcggaaaccggtgcaaaag 44064651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 21325124 - 21325176
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||| ||| ||| ||||| ||||||||||||||||||||||| ||||    
T  21325124 agccggattaatcgcccatctttgatgggtcggaaaccggtgcgaaagcaaaa 21325176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 23511630 - 23511674
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||    
T  23511630 cggattaatcgtccacctttgatgggtcgaaaaccggtgcgaaag 23511674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 55069726 - 55069674
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||| |||  ||||||||||||||||||||||||||| |||| ||||    
T  55069726 agccggattaatcgctcacctttggtgggtcggaaaccggtgcaaaagcaaaa 55069674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 928660 - 928707
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||| ||||||||||||| |||| ||| |||||||||||    
T  928660 agccggattagtcatccacctttggtgagtcgaaaatcggtgcgaaag 928707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 7310750 - 7310703
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||  || |||||||||||||||||||| ||||||||    
T  7310750 agccggattagtcgctcatctttggtgggtcggaaaccgatgcgaaag 7310703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 19873432 - 19873479
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||||| |||| ||||||||||||| ||||| ||||    
T  19873432 agccggattagtcgtccatcttttgtgggtcggaaactggtgcaaaag 19873479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 22909843 - 22909890
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||| ||||||||| |||||||| ||||||||||||| |||||||||    
T  22909843 agccgaattagtcgtgcacctttgatgggtcggaaaccagtgcgaaag 22909890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 26362014 - 26361967
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||||||  |||||||| ||||||||||||||||| |||||    
T  26362014 agccggattagtcgcacacctttgatgggtcggaaaccggtgtgaaag 26361967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 35998614 - 35998571
Alignment:
Q  74 ggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||    
T  35998614 ggattaatcgtccacctttagtgggtcagaaaccggtgcgaaag 35998571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 43330779 - 43330732
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||| ||||||||||||||||  |||||||| ||||||    
T  43330779 agccggattagtcgcccacctttggtgggtcaaaaaccggtacgaaag 43330732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 122
Target Start/End: Original strand, 48342085 - 48342132
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||| ||||||||| |||||||| |||||||||| ||||    
T  48342085 gattagtcgtccatctttggtggatcggaaacaggtgcgaaagcaaaa 48342132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 112
Target Start/End: Complemental strand, 50405647 - 50405608
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgc 112  Q
    ||||||||||| ||||| ||||||||||||||||||||||    
T  50405647 cggattagtcgcccaccattggtgggtcggaaaccggtgc 50405608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 11393522 - 11393476
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 116  Q
    |||| ||||||||||||||||||| | |||||||||||| |||||||    
T  11393522 agccagattagtcgtccacctttgattggtcggaaaccgatgcgaaa 11393476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 29195361 - 29195319
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||||| |||||| |||||||||| ||||||    
T  29195361 gattagtcgtccacctttagtgggttggaaaccggtacgaaag 29195319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 50682525 - 50682570
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaa 115  Q
    |||||||||||||||||||| ||| | ||| |||||||||||||||    
T  50682525 agccggattagtcgtccaccattgataggttggaaaccggtgcgaa 50682570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 50753385 - 50753336
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||| || | |||||||||||||||||||||| |||| ||||    
T  50753385 cggattagtcgttcatcattggtgggtcggaaaccggtgcaaaagcaaaa 50753336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 10043758 - 10043794
Alignment:
Q  86 cacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  10043758 caccattggtgggtcggaaaccggtgcgaaagcaaaa 10043794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 32522044 - 32522076
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaacc 107  Q
    ||||||||||||||||||| |||||||||||||    
T  32522044 gattagtcgtccacctttgatgggtcggaaacc 32522076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 34374486 - 34374442
Alignment:
Q  73 cggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    ||||||||||| ||  ||||||||||||||||||||||| |||||    
T  34374486 cggattagtcgcccttctttggtgggtcggaaaccggtgtgaaag 34374442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 45402398 - 45402362
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaac 106  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  45402398 agccggattagtcgttcacctttagtgggtcggaaac 45402362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 47164166 - 47164218
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||  || ||||||||| ||||||||||||| ||||| ||||    
T  47164166 agccggattagtcgctcatctttggtggatcggaaaccggtgtgaaagcaaaa 47164218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 49543579 - 49543631
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||| |||||||| |||||||| ||||||||||||| ||| |||||| ||||    
T  49543579 agccgaattagtcgcccacctttagtgggtcggaaactggtacgaaagcaaaa 49543631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 319446 - 319532
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||| ||||||||||||||||| || ||||     ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  319446 gggaacaacgcttggccagtgcgcatccctctatgcatgagctggattagtcgtccacctttggtggggcggaaaccggtgcgaaag 319532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 633 - 685
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||| |||||||||  |||||||||||||||||||||||||||||||| ||||    
T  633 agccagattagtcgctcacctttggtgggtcggaaaccggtgcgaaagcaaaa 685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 42915 - 42826
Alignment:
Q  38 gaacaaagcttggccagtgcgcatgccactata-----gccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||| |||||| ||||||||||||| ||| |     ||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  42915 gaacaatgcttggtcagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagtaaaa 42826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 9511 - 9551
Alignment:
Q  76 attagtcgtccacctttggtgggtcggaaaccggtgcgaaa 116  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  9511 attagtcgtccacctttggtgggtcagaaaccggtgcgaaa 9551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 224380 - 224427
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  224380 agccggattagtcgtccatctttggtgggtcggaaaccggtgcgaaag 224427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 186580 - 186626
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 116  Q
    ||||||||||||||| || |||| |||||||||||||||||| ||||    
T  186580 agccggattagtcgttcatctttagtgggtcggaaaccggtgtgaaa 186626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 155796 - 155710
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||| ||||||| |||||||||||| |||      |||||||||||||| |||||||||||||||||||| ||||||||||||    
T  155796 gggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaag 155710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 9869 - 9945
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaacc 107  Q
    |||||||| |||||||||||||||||||| |||      ||||||||||||||||||||||||||||||| ||||||    
T  9869 gggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcagaaacc 9945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 122
Target Start/End: Original strand, 25153 - 25200
Alignment:
Q  75 gattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  25153 gattaatcgtccacctttggtggatcggaaaccggtgcgaaagaaaaa 25200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 7950 - 7834
Alignment:
Q  1 acccggagaataccgggttcgattccca-ggggaaagggaacaaagcttggccagtgcgcatgccacta-----tagccggattagtcgtccacctttgg 94  Q
    |||||| |||||||||||| |||||||| |||||||   ||||   ||||||||||||||||||| |||     |||| |||||||||| ||||||||||    
T  7950 acccggggaataccgggtttgattcccaaggggaaa---aaca---cttggccagtgcgcatgcctctacgcattagctggattagtcgcccacctttgg 7857  T
Q  95 tgggtcggaaaccggtgcgaaag 117  Q
    ||| |||||||||||| ||||||    
T  7856 tggatcggaaaccggtacgaaag 7834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 95027 - 94979
Alignment:
Q  70 agccggattagtcgtccacc-tttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||| ||||| |||||||||||||||| |||||| ||||    
T  95027 agccggattagtcgcccaccatttggtgggtcggaaatcggtgcaaaag 94979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 12665 - 12785
Alignment:
Q  2 cccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtg 96  Q
    ||||| ||||||||||||||||||  || |||   ||||||| |||||||||||| ||||||| |||      | |||||||||||| ||||||||| ||    
T  12665 cccggggaataccgggttcgattc--agagga---ggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtcgcccacctttgatg 12759  T
Q  97 ggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||| |||||||||||||||| ||||    
T  12760 ggtcagaaaccggtgcgaaagtaaaa 12785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 114
Target Start/End: Original strand, 68577 - 68621
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcga 114  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||    
T  68577 agccggattagtcgcccacctttggtgggtcgaaaaccggtgcga 68621  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 250071 - 250019
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    ||||||||||||||  | |||||||||||||||||| ||||||||||||||||    
T  250071 agccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaagaaaaa 250019  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 271189 - 271133
Alignment:
Q  1 acccggagaataccgggttcgattcccaggggaaagggaacaaagcttggccagtgcgcatg 62  Q
    |||||||||||| |||||||||||||||||     |||||||| |||||| |||||||||||    
T  271189 acccggagaatatcgggttcgattcccagg-----gggaacaacgcttggtcagtgcgcatg 271133  T

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Target: scaffold0005; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 219436 - 219484
Alignment:
Q  74 ggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||||||||||||| ||| ||| |||||||||| |||| ||||    
T  219436 ggattagtcgtccacctttgatggatcgaaaaccggtgcaaaagcaaaa 219484  T

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Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 26207 - 26298
Alignment:
Q  36 gggaacaaagcttggccagtgcgcatgccactat-----agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||| |||||||||||| ||||||| |||      |||||||||||||||||||  ||| || |||||||||| ||||||||||||||    
T  26207 gggaacaacgcttggccagtgtgcatgcctctacgcacgagccggattagtcgtccacaattgatgagtcggaaaccagtgcgaaagaaaaa 26298  T

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Target: scaffold0316 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 1654 - 1613
Alignment:
Q  76 attagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||| ||||||||||||||||| |||||||||||||||    
T  1654 attagtcgcccacctttggtgggtcgaaaaccggtgcgaaag 1613  T

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Target: scaffold0029 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 41107 - 41154
Alignment:
Q  70 agccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 117  Q
    |||||||||||||| ||| |||||||| ||||||||||||| ||||||    
T  41107 agccggattagtcgcccatctttggtgagtcggaaaccggttcgaaag 41154  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 58075 - 58027
Alignment:
Q  74 ggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagaaaaa 122  Q
    |||||||||| | | ||||||||| ||||| ||||||||||||||||||    
T  58075 ggattagtcgcctatctttggtggatcggataccggtgcgaaagaaaaa 58027  T

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