View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18510_high_19 (Length: 235)
Name: NF18510_high_19
Description: NF18510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18510_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 48635696 - 48635478
Alignment:
| Q |
1 |
tctaataaatcttttgatattatatatccaccttgatttcattgacaatacaagtaagaccaaggacactattttattgcattattaagttaaattaaca |
100 |
Q |
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| T |
48635696 |
tctaataaatcttttgatattatatatccaccttgatttcattgacaatacaagtaagaccaaggacactattttattgcattattaagttaaattaaca |
48635597 |
T |
|
| Q |
101 |
acattcactccccctccctcccttccaacttaatttgcaaatctctctttttgccttagttttcgagcctccccacccacacgtacgttaacttgctata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
48635596 |
acattcactccccctccctcccttccaacttaatttgcaaatctctttttttgccttagttttcgagcctccccacccacacgtacgttaacttcctata |
48635497 |
T |
|
| Q |
201 |
cactacattcaattccatt |
219 |
Q |
| |
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|||||||||| |||||||| |
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| T |
48635496 |
cactacattccattccatt |
48635478 |
T |
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