View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18510_low_6 (Length: 355)
Name: NF18510_low_6
Description: NF18510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18510_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 19 - 344
Target Start/End: Complemental strand, 7293300 - 7292975
Alignment:
| Q |
19 |
ggaaacaccttgtttctctaagaaaattataatatgatataatatgtccggaaaatgttcgatagagtttgtagagtttcccctcaatcgttttttatca |
118 |
Q |
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| T |
7293300 |
ggaaacaccttgtttctctaagaaaattataatatgatataatatgtcctgaaaatgttcgatagagtttgtagagtttcccctcaatcgttttttatca |
7293201 |
T |
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| Q |
119 |
acacttctagatataaattattgtcctaagttgtttttggcttatgcataattttcatattgtcattttccatttgattgtacacacaaatatacgtaga |
218 |
Q |
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| T |
7293200 |
acacttctagatataaattattgtcctaagttgtttttcgcttatgcataattttcatattgtcattttccatttgattgtacacacaaatatacgtaga |
7293101 |
T |
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| Q |
219 |
atcttataaaatacttcttccgaaataaaatataaacaaattaaagcggtggttgaaaaatcaatgcatctggttaaaaatttggctcacaaaaattaac |
318 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7293100 |
atcttataaaatacttcttctgaaataaaatataaacaaattaaagcggtggttgaaaaatcaatgcatctggttaaaaatttggctcacaaaaattaac |
7293001 |
T |
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| Q |
319 |
tcatcagatgcccttgtttgattcat |
344 |
Q |
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||||||| |||||||||||||||||| |
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| T |
7293000 |
tcatcaggtgcccttgtttgattcat |
7292975 |
T |
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