View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18511_high_14 (Length: 240)
Name: NF18511_high_14
Description: NF18511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18511_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 15293199 - 15292975
Alignment:
| Q |
1 |
aaatggtaaatttggaattcgaaccctaactgttgtataaggcaatgttcctaccaacttaaatatgctaacaagaacaataccatcatcctttctatca |
100 |
Q |
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| T |
15293199 |
aaatggtaaatttggaattcgaaccttaactgttgtataacgcaatattcctaccaacttaaatatgctaacaagaacaataccatcatcctttctatca |
15293100 |
T |
|
| Q |
101 |
caatttagctggtgaaaagataaacaaatgcaaactatcatctttttacccatataaaaaagtattgtaagtgacgtatttataaggagagagaataatt |
200 |
Q |
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|||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15293099 |
caatttcgctggtgaaaagataaacaaatgcaaactatcatttttttacccatataaaaaagtattgtaagtgacgtatttataaggagagagaataatt |
15293000 |
T |
|
| Q |
201 |
ttgatgtaacattactataaaattt |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
15292999 |
ttgatgtaacattactataaaattt |
15292975 |
T |
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