View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18511_low_9 (Length: 319)
Name: NF18511_low_9
Description: NF18511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18511_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 19 - 312
Target Start/End: Complemental strand, 36397477 - 36397182
Alignment:
| Q |
19 |
ataaaaagcctacgtgatcacgtagtgaattttgttttcgttatcttaaacattaccattgttgtataaaccccaaaaatatcttgact--gtgattgca |
116 |
Q |
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| T |
36397477 |
ataaaaagcctacgtgatcacgtcgtgaattttgttttcgttatcttaaacattaccattgttgtataaaccccaaaaatatcttgactctgtgattgca |
36397378 |
T |
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| Q |
117 |
attgattgcggacatcaatttaaaacataagcattctttatattgaatgtagtgtgacttgtaaaggacaaaaatagaattataaacactaaacagacaa |
216 |
Q |
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| T |
36397377 |
attgattgcggacatgaatttaaaacataagcattctttatattgaatgtagtgtgacttgtaaaggacaaaaatagaattataaacactaaacagacaa |
36397278 |
T |
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| Q |
217 |
tctggattgtgtagtgaaaatctagcagaagaacttatgccatgccaattcatttaagaacaatcaagtgctattctatttctgatatattcttcg |
312 |
Q |
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| T |
36397277 |
tttggattgtgtagtgaaaatctagcagaagaacttatgccatgccaattcatttaagaacaatcaagtgctattctatttctgatattttcttcg |
36397182 |
T |
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