View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18512_high_9 (Length: 382)

Name: NF18512_high_9
Description: NF18512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18512_high_9
NF18512_high_9
[»] chr7 (45 HSPs)
chr7 (16-367)||(6584690-6585028)
chr7 (210-367)||(34389926-34390081)
chr7 (210-361)||(41089716-41089865)
chr7 (210-361)||(33435073-33435222)
chr7 (210-361)||(47325854-47326002)
chr7 (210-367)||(35745788-35745944)
chr7 (210-361)||(3419624-3419773)
chr7 (210-361)||(25160779-25160925)
chr7 (210-361)||(38306225-38306373)
chr7 (210-361)||(10244146-10244294)
chr7 (210-361)||(3867080-3867229)
chr7 (214-361)||(37794957-37795101)
chr7 (60-210)||(42533509-42533663)
chr7 (60-207)||(34389634-34389783)
chr7 (45-210)||(47326141-47326310)
chr7 (217-361)||(5860257-5860398)
chr7 (210-306)||(16954617-16954713)
chr7 (210-290)||(42533289-42533369)
chr7 (60-210)||(3419912-3420066)
chr7 (39-210)||(3478003-3478178)
chr7 (39-206)||(16954304-16954474)
chr7 (268-361)||(44353533-44353623)
chr7 (210-284)||(44755591-44755664)
chr7 (210-290)||(8745117-8745197)
chr7 (72-184)||(9106852-9106964)
chr7 (50-171)||(1320455-1320580)
chr7 (49-136)||(25160477-25160564)
chr7 (222-308)||(3478328-3478414)
chr7 (210-308)||(6716755-6716853)
chr7 (210-283)||(1320758-1320831)
chr7 (60-212)||(8744824-8744980)
chr7 (210-299)||(38485520-38485609)
chr7 (210-306)||(16828957-16829053)
chr7 (49-136)||(10243848-10243935)
chr7 (60-206)||(33434779-33434931)
chr7 (210-363)||(46133244-46133395)
chr7 (214-308)||(24324817-24324911)
chr7 (44-210)||(37794657-37794826)
chr7 (44-210)||(38305917-38306086)
chr7 (210-308)||(47457041-47457139)
chr7 (210-307)||(13311803-13311900)
chr7 (139-174)||(6717024-6717059)
chr7 (257-290)||(25153231-25153264)
chr7 (257-290)||(27993573-27993606)
chr7 (254-290)||(9349757-9349793)
[»] chr1 (44 HSPs)
chr1 (210-367)||(46814429-46814584)
chr1 (210-367)||(27031802-27031957)
chr1 (210-367)||(24658893-24659048)
chr1 (210-367)||(7857617-7857772)
chr1 (210-361)||(24684446-24684595)
chr1 (210-361)||(24449899-24450047)
chr1 (210-361)||(30685873-30686021)
chr1 (210-361)||(46692788-46692936)
chr1 (39-161)||(52278156-52278279)
chr1 (210-361)||(41920417-41920564)
chr1 (210-361)||(5389390-5389538)
chr1 (210-361)||(31585729-31585877)
chr1 (30-160)||(16147210-16147341)
chr1 (218-363)||(5459133-5459275)
chr1 (39-174)||(7857301-7857439)
chr1 (65-212)||(30686158-30686308)
chr1 (44-210)||(31586016-31586186)
chr1 (210-308)||(9313308-9313406)
chr1 (229-290)||(6583253-6583314)
chr1 (27-184)||(46814750-46814910)
chr1 (50-211)||(10785582-10785748)
chr1 (44-136)||(46693152-46693244)
chr1 (44-183)||(24450214-24450357)
chr1 (45-175)||(27101966-27102089)
chr1 (210-299)||(4651744-4651833)
chr1 (231-307)||(17033571-17033647)
chr1 (44-136)||(20113854-20113946)
chr1 (222-282)||(34774847-34774907)
chr1 (210-283)||(20113565-20113638)
chr1 (210-306)||(19598600-19598696)
chr1 (44-136)||(24684809-24684901)
chr1 (222-290)||(40933839-40933907)
chr1 (44-136)||(41920137-41920228)
chr1 (49-175)||(9313517-9313649)
chr1 (27-184)||(24658566-24658725)
chr1 (71-169)||(19598342-19598440)
chr1 (245-291)||(27905411-27905457)
chr1 (214-299)||(42374131-42374216)
chr1 (101-184)||(27032147-27032231)
chr1 (121-184)||(38545017-38545080)
chr1 (210-307)||(27102154-27102252)
chr1 (237-307)||(38544758-38544828)
chr1 (229-290)||(32864598-32864659)
chr1 (71-159)||(17033273-17033361)
[»] chr3 (37 HSPs)
chr3 (210-367)||(23328312-23328467)
chr3 (226-367)||(45398776-45398915)
chr3 (210-360)||(40023541-40023688)
chr3 (211-361)||(2392475-2392622)
chr3 (210-361)||(19176467-19176615)
chr3 (210-361)||(34475723-34475871)
chr3 (210-363)||(9584019-9584170)
chr3 (210-361)||(20611747-20611895)
chr3 (39-212)||(37123040-37123218)
chr3 (60-207)||(40023829-40023975)
chr3 (39-210)||(47235366-47235541)
chr3 (245-361)||(43012374-43012488)
chr3 (217-361)||(45163824-45163967)
chr3 (211-289)||(2394291-2394369)
chr3 (44-209)||(25647336-25647507)
chr3 (214-289)||(14193908-14193983)
chr3 (45-210)||(20611439-20611608)
chr3 (44-136)||(45163504-45163596)
chr3 (92-210)||(14193641-14193763)
chr3 (257-361)||(17550968-17551069)
chr3 (49-183)||(34476037-34476173)
chr3 (210-290)||(25647648-25647728)
chr3 (232-290)||(14879421-14879479)
chr3 (74-174)||(1653176-1653276)
chr3 (44-136)||(19176159-19176251)
chr3 (230-361)||(31482868-31482996)
chr3 (316-367)||(21342603-21342654)
chr3 (210-307)||(14755285-14755380)
chr3 (210-283)||(30935434-30935507)
chr3 (210-307)||(37123346-37123443)
chr3 (44-136)||(2394591-2394683)
chr3 (256-307)||(33143969-33144020)
chr3 (210-308)||(47945669-47945768)
chr3 (242-362)||(1652855-1652971)
chr3 (216-250)||(47235686-47235720)
chr3 (39-84)||(4464323-4464368)
chr3 (277-361)||(47235729-47235810)
[»] chr8 (30 HSPs)
chr8 (210-367)||(15821341-15821496)
chr8 (210-361)||(34388974-34389122)
chr8 (214-361)||(36630805-36630950)
chr8 (210-363)||(9519463-9519613)
chr8 (210-363)||(32066262-32066412)
chr8 (210-361)||(37986827-37986975)
chr8 (210-361)||(24995364-24995512)
chr8 (210-361)||(31207331-31207478)
chr8 (39-174)||(10248845-10248982)
chr8 (37-175)||(17657297-17657438)
chr8 (44-136)||(34389311-34389403)
chr8 (44-136)||(36630493-36630585)
chr8 (210-308)||(10248572-10248670)
chr8 (225-358)||(16457433-16457562)
chr8 (268-361)||(20138448-20138538)
chr8 (37-184)||(15821663-15821812)
chr8 (210-307)||(30236148-30236245)
chr8 (44-210)||(37987114-37987284)
chr8 (311-368)||(38577751-38577808)
chr8 (44-136)||(32066628-32066720)
chr8 (210-283)||(10552233-10552305)
chr8 (44-172)||(24995690-24995817)
chr8 (71-184)||(30236377-30236490)
chr8 (242-299)||(35062453-35062510)
chr8 (223-299)||(12898302-12898378)
chr8 (116-184)||(18690160-18690228)
chr8 (229-308)||(17657021-17657100)
chr8 (246-307)||(15906686-15906747)
chr8 (44-133)||(34866375-34866464)
chr8 (334-367)||(35816205-35816238)
[»] chr2 (31 HSPs)
chr2 (210-367)||(7874255-7874410)
chr2 (210-355)||(14405163-14405305)
chr2 (39-210)||(17105062-17105236)
chr2 (214-361)||(39338834-39338978)
chr2 (224-361)||(387151-387287)
chr2 (225-367)||(14106484-14106626)
chr2 (250-367)||(5254260-5254375)
chr2 (49-212)||(41087040-41087208)
chr2 (29-175)||(37770933-37771085)
chr2 (37-174)||(1269128-1269270)
chr2 (210-290)||(10524061-10524141)
chr2 (229-308)||(1269466-1269545)
chr2 (45-210)||(39339121-39339290)
chr2 (210-283)||(37770685-37770758)
chr2 (214-304)||(17105379-17105470)
chr2 (39-210)||(7695719-7695893)
chr2 (115-184)||(22885412-22885481)
chr2 (253-308)||(16959989-16960044)
chr2 (210-367)||(10173541-10173695)
chr2 (229-290)||(9560825-9560886)
chr2 (230-307)||(22885153-22885229)
chr2 (210-291)||(41086824-41086904)
chr2 (116-184)||(15710437-15710505)
chr2 (116-184)||(15722900-15722968)
chr2 (229-291)||(8520385-8520447)
chr2 (104-166)||(25505196-25505258)
chr2 (210-299)||(27739939-27740028)
chr2 (110-210)||(10523819-10523922)
chr2 (115-158)||(16952681-16952725)
chr2 (115-158)||(17023346-17023390)
chr2 (115-158)||(17060652-17060696)
[»] chr5 (25 HSPs)
chr5 (210-361)||(29087445-29087594)
chr5 (210-361)||(34378062-34378210)
chr5 (210-363)||(698325-698475)
chr5 (210-309)||(7392049-7392148)
chr5 (44-184)||(29087204-29087346)
chr5 (39-175)||(26046256-26046395)
chr5 (39-184)||(7195523-7195672)
chr5 (71-184)||(24072546-24072659)
chr5 (210-361)||(18593207-18593355)
chr5 (210-307)||(33258902-33258999)
chr5 (210-290)||(13954271-13954350)
chr5 (210-308)||(7195258-7195355)
chr5 (39-174)||(13954525-13954663)
chr5 (210-307)||(14302450-14302547)
chr5 (210-308)||(8297432-8297530)
chr5 (210-307)||(24072286-24072383)
chr5 (210-299)||(31721641-31721730)
chr5 (313-361)||(7162285-7162333)
chr5 (249-308)||(22675343-22675402)
chr5 (212-305)||(25991973-25992066)
chr5 (246-290)||(26046001-26046045)
chr5 (104-166)||(8730649-8730711)
chr5 (229-299)||(28765630-28765700)
chr5 (257-289)||(25341709-25341741)
chr5 (115-166)||(27712819-27712871)
[»] chr4 (28 HSPs)
chr4 (210-361)||(8254991-8255139)
chr4 (210-361)||(8268409-8268557)
chr4 (217-367)||(31050623-31050772)
chr4 (210-361)||(2825747-2825896)
chr4 (39-210)||(19672753-19672927)
chr4 (44-210)||(8254683-8254852)
chr4 (44-210)||(8268101-8268270)
chr4 (210-308)||(53823440-53823538)
chr4 (210-361)||(30964405-30964553)
chr4 (210-352)||(4305689-4305828)
chr4 (60-210)||(31050917-31051070)
chr4 (220-308)||(19815243-19815331)
chr4 (210-361)||(25753136-25753283)
chr4 (210-308)||(38929791-38929889)
chr4 (243-305)||(49747524-49747586)
chr4 (51-210)||(30964104-30964266)
chr4 (294-359)||(35341308-35341371)
chr4 (210-307)||(2061758-2061855)
chr4 (44-206)||(4305381-4305546)
chr4 (222-308)||(19673077-19673162)
chr4 (210-308)||(22811179-22811276)
chr4 (233-290)||(35800476-35800533)
chr4 (210-290)||(21387241-21387321)
chr4 (125-210)||(22811416-22811504)
chr4 (217-288)||(19311381-19311451)
chr4 (229-299)||(36962643-36962713)
chr4 (257-299)||(39041302-39041344)
chr4 (229-290)||(39421050-39421111)
[»] chr6 (17 HSPs)
chr6 (44-210)||(16510549-16510718)
chr6 (49-184)||(20702086-20702225)
chr6 (210-305)||(16510323-16510418)
chr6 (210-361)||(3117457-3117605)
chr6 (45-184)||(12793776-12793916)
chr6 (210-367)||(20701767-20701920)
chr6 (210-283)||(3880627-3880700)
chr6 (210-265)||(15132585-15132640)
chr6 (222-304)||(32935362-32935444)
chr6 (44-210)||(15132778-15132947)
chr6 (230-304)||(12794098-12794173)
chr6 (233-304)||(26216042-26216112)
chr6 (233-289)||(26534757-26534813)
chr6 (262-308)||(13423482-13423528)
chr6 (257-290)||(7546466-7546499)
chr6 (214-307)||(9224010-9224102)
chr6 (243-299)||(34105410-34105466)
[»] scaffold0068 (2 HSPs)
scaffold0068 (210-361)||(35741-35888)
scaffold0068 (60-210)||(36028-36181)
[»] scaffold0200 (1 HSPs)
scaffold0200 (229-368)||(19366-19501)
[»] scaffold0063 (2 HSPs)
scaffold0063 (39-174)||(57842-57981)
scaffold0063 (233-283)||(58114-58164)
[»] scaffold0050 (2 HSPs)
scaffold0050 (210-306)||(36671-36767)
scaffold0050 (27-175)||(36340-36495)
[»] scaffold0119 (2 HSPs)
scaffold0119 (37-174)||(42432-42574)
scaffold0119 (229-308)||(42157-42236)
[»] scaffold0062 (4 HSPs)
scaffold0062 (78-160)||(46784-46866)
scaffold0062 (210-290)||(47057-47137)
scaffold0062 (116-184)||(59349-59417)
scaffold0062 (116-184)||(71457-71525)
[»] scaffold1613 (2 HSPs)
scaffold1613 (121-184)||(1296-1359)
scaffold1613 (237-307)||(1037-1107)
[»] scaffold0343 (1 HSPs)
scaffold0343 (315-361)||(5772-5818)


Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 16 - 367
Target Start/End: Original strand, 6584690 - 6585028
Alignment:
Q  16 gagctacatttgggggtggtagatgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggt 115  Q
    |||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||| |    
T  6584690 gagctacatt-gggggtggttggtgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagatagcctctattacacgggtccatgat 6584788  T
Q  116 cgtcgtcgctagctcttgttt-catttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtccgttgcgatgagccttttccttttgatctct 214  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||         ||||| |||||  |||||||||||||||||||||||||||||| |    
T  6584789 cgtcgtcgctagctcttgtttgcatttatgggttgttaaggtgttt---------ggagggtgcgt--ccgttgcgatgagccttttccttttgatctat 6584877  T
Q  215 ggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaa 314  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  ||||||||||||||||  ||||    
T  6584878 ggtgtaccggaggcgaggggtgccctgctgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctctttggc--ttaa 6584975  T
Q  315 gttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagag 367  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6584976 gttggtttttgggcttttgttttgtgctctttcggtggatcggaggttgagag 6585028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 210 - 367
Target Start/End: Original strand, 34389926 - 34390081
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||| ||||| |||| ||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||  ||||||||||||||||     
T  34389926 tctctggtgtactgggggtgaggagtgccctgctgatttggttttaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctctttggc- 34390024  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagag 367  Q
     |||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  34390025 -ttaagttggtttttgggcttttattttgtgctctttcggtggatcggaggtcgagag 34390081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 210 - 361
Target Start/End: Complemental strand, 41089865 - 41089716
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||| |||||   ||||||||||||||  |    
T  41089865 tctctggtgtatcgggggcgaggggtgctctgctaatttggtactaaagtctggtggaccgatcacttttgattcgagattgggagtcagctctttg--a 41089768  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | ||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  41089767 ctcaagttggtttttgagcttttgttttgtgatctttcggtggatcggaggt 41089716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 33435073 - 33435222
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||||||||||||||||||||| | ||||||| |||||||||||||   ||||||||||||||| ||||||  ||||||| |||||| |     
T  33435073 tctctggtgtaccgggggcgaggggtgccctgttaatttggtactaaagtctggtgagacgatcacttttgattcgagatcgggagtcagttctttgtc- 33435171  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | ||||| |||| | ||| ||||||||||||||||||||||||||||||||    
T  33435172 -tcaagttcgtttgtgggcatttgttttgtgctctttcggtggatcggaggt 33435222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 210 - 361
Target Start/End: Complemental strand, 47326002 - 47325854
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||||||||||||||||||||||||||| |||| ||||||| ||| |||||||||| |||||| ||||||||||||||||  ||||||||||||||  |    
T  47326002 tctctggtgtaccgggggcgaggggtgccttgctaatttggtactatagtctggtgggccgatcgcttttgatttgagatcgggagtcagctctttg--a 47325905  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | |||||||||||| ||| |||||  |||||||||||| ||||||||||||    
T  47325904 ctcaagttggtttttgggc-tttgtgctgtgctctttcgatggatcggaggt 47325854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 210 - 367
Target Start/End: Complemental strand, 35745944 - 35745788
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||| |||||||||||||||||||||||| || |||| ||||||||||||| ||| | |||||||||||||| ||||||   ||||| |||||||||     
T  35745944 tctctgatgtaccgggggcgaggggtgccctactaattttgttctaaagtctgatgggctgatcacttttgattcgagatcggaagtcatctctttggc- 35745846  T
Q  310 attaagttggttttttggcttttg-ttttgtgctctttcggtggatcggaggttgagag 367  Q
     | |||||||||||| |||||||| ||||||||||||||||||||| |||||| |||||    
T  35745845 -tcaagttggtttttgggcttttgtttttgtgctctttcggtggattggaggtggagag 35745788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 210 - 361
Target Start/End: Complemental strand, 3419773 - 3419624
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||| ||||||||||||||||||||||| | ||||||| ||||||| |||||| | |||||||||||||| ||||||  ||||||||||||||  |    
T  3419773 tctctggtataccgggggcgaggggtgccctgttaatttggtactaaagtgtggtgggctgatcacttttgattcgagatcgggagtcagctctttg--a 3419676  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | |||||||||||| ||||||  || ||||||||||||||||||| |||||    
T  3419675 ctcaagttggtttttgggctttgtttctgtgctctttcggtggatcagaggt 3419624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 25160779 - 25160925
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||| ||||||   |||||  ||||  | |    
T  25160779 tctctggtgtaccgagggcgaggggtgccctgctaatttggttctatagtctggtggaccgattacttttgattcgagatcggaagtcaaatctt--gaa 25160876  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
    ||||||||||||||| |||   ||| ||||||||||||||||||| ||||||    
T  25160877 attaagttggtttttgggc---tgtgttgtgctctttcggtggattggaggt 25160925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 38306225 - 38306373
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||| ||||||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||| |||||   ||||||| ||||||  |    
T  38306225 tctctggtgtacagggggcgaggggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagattgggagtcagttctttg--a 38306322  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | |||||||||||| ||| ||||| ||||||||||||| ||| ||||||||    
T  38306323 ctcaagttggtttttgggc-tttgtgttgtgctctttcgatggttcggaggt 38306373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 10244146 - 10244294
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||| | |||||||| |||||||||||||||| ||||||  ||||||| ||||||  |    
T  10244146 tctctggtgtaccgggggagaggggtgccctgctaatttggtgctataatctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--a 10244243  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | ||||| | |||||||| ||||| |||||||||||| |||| ||||||||    
T  10244244 ctcaagttag-tttttggcctttgtgttgtgctctttcagtggttcggaggt 10244294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 3867080 - 3867229
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||| |||||| ||||| |||||| ||||||| ||||| | |||||| | |||||||||||||| |||| |  ||||||| ||||||  |    
T  3867080 tctctggtgtaccgagggcgaagggtggcctgctaatttggtactaaaatatggtgggctgatcacttttgattcgagaccgggagtcagttctttg--a 3867177  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | |||||||||||| |||||||| ||||||||||| ||||||||| |||||    
T  3867178 ctcaagttggtttttgggcttttgctttgtgctcttgcggtggatcagaggt 3867229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 214 - 361
Target Start/End: Original strand, 37794957 - 37795101
Alignment:
Q  214 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaatta 313  Q
    |||||||||||||||||||||||||||||| |||||||  || ||| |||||| ||| ||| |||||||| ||||||  ||||||| ||||||  | | |    
T  37794957 tggtgtaccgggggcgaggggtgccctgctaatttggtaatatagtatggtgggccgttcagttttgattcgagatcgggagtcagttctttg--agtca 37795054  T
Q  314 agttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
    ||||||||||| ||| ||||| ||||||||||||||||| ||||||||    
T  37795055 agttggtttttgggc-tttgtgttgtgctctttcggtggttcggaggt 37795101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 210
Target Start/End: Complemental strand, 42533663 - 42533509
Alignment:
Q  60 ggtgtttgttgg-ggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttc--atttttgggttgttaaggt 156  Q
    |||||||||| | |||||||||||||||||  ||| | |||||| |||||||||| ||||||||  | ||||||||||   |||||||||||||||||||    
T  42533663 ggtgtttgttagaggtgatttcttttggaggtagcatctgttactcgggtccatgttcgtcgtcattggctcttgtttgtgatttttgggttgttaaggt 42533564  T
Q  157 gtttagggtgtttggaggatgcgtgt-ccgttgcgatgagccttttccttttgat 210  Q
    ||||| |||| |||||||| |||||| ||||||   |||||||||||||||||||    
T  42533563 gtttaaggtggttggaggaagcgtgtcccgttgttctgagccttttccttttgat 42533509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 60 - 207
Target Start/End: Original strand, 34389634 - 34389783
Alignment:
Q  60 ggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttg---ggttgttaaggt 156  Q
    ||||||||| ||||||||| ||||||||| | | || |||| | ||||||  || |||||||| |||||||| ||||  ||||||   ||||||||||||    
T  34389634 ggtgtttgtgggggtgattccttttggag-ctgactctgttgctcgggtcattgttcgtcgtcactagctctcgttttttttttgttgggttgttaaggt 34389732  T
Q  157 gtttagggtgtttggaggatgcgtgtccgttgcgatgagccttttcctttt 207  Q
    ||||||| |||||||||| ||||||| |||||||||| |||||||||||||    
T  34389733 gtttaggttgtttggagggtgcgtgttcgttgcgatgggccttttcctttt 34389783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 45 - 210
Target Start/End: Complemental strand, 47326310 - 47326141
Alignment:
Q  45 ttaggtgaggaggcaggtgtttgttg-gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 141  Q
    |||||||||||||  || | |||||| |||||||||| ||| ||  || ||||||||||||||||||||| |||||||  ||||||||||||  |  |||    
T  47326310 ttaggtgaggaggtgggcggttgttgtgggtgatttcctttagaagcaacctttgttacacgggtccatgttcgtcgttactagctcttgtttgtgcttt 47326211  T
Q  142 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 210  Q
    |||||| ||| |||| |||| || ||||||||| |||||||| ||||| | |||||||||||||||||||    
T  47326210 ttgggtggtttaggtatttacggagtttggagggtgcgtgtcacgttgtgttgagccttttccttttgat 47326141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 217 - 361
Target Start/End: Complemental strand, 5860398 - 5860257
Alignment:
Q  217 tgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagt 316  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||| ||||| || ||| ||||||||| ||||||  ||||||  ||||||  |   ||||    
T  5860398 tgtaccgggggcgaggggtgccctgctaatttggtactatagtccggtgggcctatcgcttttgattcgagatcgggagtcaattctttg--acgcaagt 5860301  T
Q  317 tggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
    |||||||| ||| ||||| ||||||||||||||||| ||||||||    
T  5860300 tggtttttgggc-tttgtgttgtgctctttcggtggttcggaggt 5860257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 210 - 306
Target Start/End: Original strand, 16954617 - 16954713
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttg 306  Q
    ||||||||||| | | || |||||||||||| |||||||||| |||||||||||| ||||||||||||||| || |||||| | |||||| ||||||    
T  16954617 tctctggtgtatcagaggtgaggggtgcccttctgatttggtcctaaagtctggttgaccgatcacttttgtttcgagatcgaaagtcagttctttg 16954713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 210 - 290
Target Start/End: Complemental strand, 42533369 - 42533289
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 290  Q
    ||||||||| | |||||| |||||||||||| |||||||||| |||||||||||||| | |||||||||||||| ||||||    
T  42533369 tctctggtgcatcgggggtgaggggtgccctcctgatttggtcctaaagtctggtgggctgatcacttttgattcgagatc 42533289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 210
Target Start/End: Complemental strand, 3420066 - 3419912
Alignment:
Q  60 ggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtg 157  Q
    |||| |||||||||||||||  ||||||  || ||| ||||||||||||||||| |||| ||| ||||||||||||  |  ||||||||| ||| |||||    
T  3420066 ggtgcttgttggggtgattttctttggaagcaacctctgttacacgggtccatgttcgttgtcactagctcttgtttgtgctttttgggtggtttaggtg 3419967  T
Q  158 tttagggtgtttggaggatgcgtgtc-cg-ttgcgatgagccttttccttttgat 210  Q
    |||| || ||||||||| |||||||| || ||| | |||||| ||||||||||||    
T  3419966 tttacggagtttggagggtgcgtgtcacgtttgtgttgagccctttccttttgat 3419912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 210
Target Start/End: Original strand, 3478003 - 3478178
Alignment:
Q  39 tgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt-tc 137  Q
    |||| ||||||||||| ||  ||||||| ||||||||||||  ||||||| || |||   |||||||||| |||  |||||||| ||||||||||||  |    
T  3478003 tgttgtttaggtgaggtggggggtgttttttggggtgattttatttggaggcatcctcaattacacgggttcatattcgtcgtcactagctcttgttggc 3478102  T
Q  138 atttttgggttgttaagg-tgtttagggtg-tttggaggatgcgtgtcc-gttgcgatgagccttttccttttgat 210  Q
     ||||||||||||||||| | ||| || || |||||||| |||||||||  ||| |||||||||||||||||||||    
T  3478103 gtttttgggttgttaaggtttttttggatgttttggagggtgcgtgtccttttgagatgagccttttccttttgat 3478178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 206
Target Start/End: Original strand, 16954304 - 16954474
Alignment:
Q  39 tgttatttaggtgaggaggcaggtgtttgttgggg-tgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt- 136  Q
    |||| |||| |||||||||   ||||||||||||| ||||||| | ||||| ||| ||||||||| ||||| | || | |||||| ||| |||| ||||     
T  16954304 tgttgtttatgtgaggaggagagtgtttgttgggggtgatttcgtctggaggcagtctttgttactcgggtacttgtttgtcgtcactatctctagtttg 16954403  T
Q  137 catttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttt 206  Q
    ||||||| | ||||||||||||||||||| ||||||||  ||| ||| ||||| | |||||||||||||||    
T  16954404 catttttcgattgttaaggtgtttagggtttttggaggtagcgggtctcgttgagttgagccttttccttt 16954474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 361
Target Start/End: Complemental strand, 44353623 - 44353533
Alignment:
Q  268 ccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
    |||||||||||||||||||||||  ||||||| |||||| |  ||| |||||||||| |||||| || ||||||||||||||||||||||||||    
T  44353623 ccgatcacttttgatttgagatcgggagtcagttctttgac--ttatgttggtttttgggcttt-gtgttgtgctctttcggtggatcggaggt 44353533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 284
Target Start/End: Original strand, 44755591 - 44755664
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgattt 284  Q
    |||||||||||||| ||  |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||    
T  44755591 tctctggtgtaccgtggt-gaggggtgcccttctgatttggtcctaaagtctggtgggccgatcacttttgattt 44755664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 290
Target Start/End: Original strand, 8745117 - 8745197
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 290  Q
    ||||||||| |||| ||| |||||||| ||| |||||||||| ||||| |||||||| |||||||||||||||| ||||||    
T  8745117 tctctggtgcaccgagggtgaggggtggccttctgatttggtcctaaattctggtgggccgatcacttttgattcgagatc 8745197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 184
Target Start/End: Original strand, 9106852 - 9106964
Alignment:
Q  72 ggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttgg 171  Q
    ||||||||||||| ||| | |||| |||||  | |||||||  |||||||||||||||||||||| | |||| || ||||||||||||||||||| || |    
T  9106852 ggtgatttcttttagaggccgcctctgttattcaggtccattttcgtcgtcgctagctcttgtttgagttttagggtgttaaggtgtttagggtgctttg 9106951  T
Q  172 aggatgcgtgtcc 184  Q
    ||| || ||||||    
T  9106952 agggtgggtgtcc 9106964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 50 - 171
Target Start/End: Original strand, 1320455 - 1320580
Alignment:
Q  50 tgaggaggcaggtgtttgttgggg-tgatttcttttggagacagcctttgttacacgggtccatg-gtcgtcgtcgctagctcttgttt-cattttt--g 144  Q
    |||||||| ||||||||||||||| ||||||||||| ||| |||||| | |||||||||||| ||  |||||||| ||||||||||||| |||||||  |    
T  1320455 tgaggaggaaggtgtttgttgggggtgatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttttag 1320554  T
Q  145 ggttgttaaggtgtttagggtgtttgg 171  Q
    | ||||| ||||||||| |||||||||    
T  1320555 gattgtt-aggtgtttatggtgtttgg 1320580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 25160477 - 25160564
Alignment:
Q  49 gtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 136  Q
    |||||||||| ||||||||||||||||||||| ||   |  || ||| ||||||||||||||||| |||||||| |||||||||||||    
T  25160477 gtgaggaggcgggtgtttgttggggtgatttccttaaaaagcaacctatgttacacgggtccatgttcgtcgtcactagctcttgttt 25160564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 308
Target Start/End: Original strand, 3478328 - 3478414
Alignment:
Q  222 cgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    |||||| |||||||||||| ||| |||||| ||||||| |||||| |||||||||||||||| ||||||  |||| || ||||||||    
T  3478328 cgggggtgaggggtgcccttctgttttggtcctaaagtttggtgggccgatcacttttgattcgagatcgggagttagttctttggc 3478414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 308
Target Start/End: Complemental strand, 6716853 - 6716755
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    |||||||||||||| | | |||||||||||| |||||||  |  ||||||||||| | |||||||||||||||| ||||||  ||||||| ||||||||    
T  6716853 tctctggtgtaccgagagtgaggggtgcccttctgatttaatcataaagtctggttggccgatcacttttgattcgagatcgggagtcagttctttggc 6716755  T

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Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 1320758 - 1320831
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 283  Q
    |||||| |||| |||||| ||||||||||||  |||||||||  ||||||||||||| ||||||||||||||||    
T  1320758 tctctgatgtatcgggggtgaggggtgcccttttgatttggtcataaagtctggtgggccgatcacttttgatt 1320831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 60 - 212
Target Start/End: Original strand, 8744824 - 8744980
Alignment:
Q  60 ggtgtttgttgggg-tgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttca--tttttgggttgttaaggt 156  Q
    |||||||||||||| |||| ||||||||||    |||||||||| ||| ||| || |||||||| ||||| |||||||    ||||| ||||||||||||    
T  8744824 ggtgtttgttgggggtgatctcttttggaggtttcctttgttactcggttccttgttcgtcgtcactagcccttgtttgcgttttttcggttgttaaggt 8744923  T
Q  157 gtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgatct 212  Q
    ||||| | ||||||||||| ||| |||  |||| | |||||||| ||||||||||||    
T  8744924 gtttacgatgtttggaggaagcgagtcttgttgagttgagccttctccttttgatct 8744980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 299
Target Start/End: Original strand, 38485520 - 38485609
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 299  Q
    ||||||||| || |||||  ||||||||||| |||| || ||||| ||||||||||| |||||||||||||||| ||||||  |||||||    
T  38485520 tctctggtggactgggggtaaggggtgcccttctgaatttgttctgaagtctggtgggccgatcacttttgattcgagatcgggagtcag 38485609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 306
Target Start/End: Complemental strand, 16829053 - 16828957
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttg 306  Q
    ||||| ||||| | |||| |||||||||||| |||||||||| |||||||||||| | | ||||||||||| || |||||| | |||||| ||||||    
T  16829053 tctctagtgtatcaggggtgaggggtgcccttctgatttggtcctaaagtctggttggctgatcacttttgtttcgagatcgaaagtcagttctttg 16828957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 10243848 - 10243935
Alignment:
Q  49 gtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 136  Q
    ||||| |||| | ||||||||||||||||||| ||| ||  || ||| |||||||||||| |||| |||||||| |||||||||||||    
T  10243848 gtgagaaggccgatgtttgttggggtgatttcctttagaagcaacctctgttacacgggtacatgttcgtcgtcactagctcttgttt 10243935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 206
Target Start/End: Original strand, 33434779 - 33434931
Alignment:
Q  60 ggtgtttgttgggg-tgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt----catttttgggttgttaag 154  Q
    |||||||||||||| ||||||| |||| || || ||| |||||| |||||| ||| |||||||| ||||||| |||||    | ||||||||| ||| ||    
T  33434779 ggtgtttgttgggggtgatttcctttgaaggcaacctctgttactcgggtctatgttcgtcgtcactagctcctgttttgtgcttttttgggtggtttag 33434878  T
Q  155 gtgtttagggtgtttggaggatgcgtgt-ccgttgcgatgagccttttccttt 206  Q
    || |||||||||||||||||  ||| || |||||| |  ||||||||||||||    
T  33434879 gtatttagggtgtttggagggagcgggtcccgttgtgtcgagccttttccttt 33434931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 363
Target Start/End: Complemental strand, 46133395 - 46133244
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||||||| ||||| ||  ||| ||||||| |||||||||| || ||||||||||  |||||| ||||||||||||||||  ||||||| ||| |||      
T  46133395 tctctggtggaccggaggttaggagtgcccttctgatttggtgctgaagtctggtgagccgatcgcttttgatttgagatcgggagtcagttctctgg-- 46133298  T
Q  310 attaag-ttggttttttggcttttgttttgtgctctttcggtggatcggaggttg 363  Q
     | ||| ||||||||| ||||||| ||| ||| || ||||||||| |||||||||    
T  46133297 ttcaagtttggtttttgggctttt-tttggtgttccttcggtggaccggaggttg 46133244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 24324911 - 24324817
Alignment:
Q  214 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    |||||||||||||   ||||||||||| ||||||||||  |||||| |||||| ||||||| |||||||| ||||||  ||||||  ||||||||    
T  24324911 tggtgtaccggggtttaggggtgcccttctgatttggtcttaaagtttggtgggccgatcaattttgattcgagatcgggagtcaattctttggc 24324817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 37794657 - 37794826
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 141  Q
    |||| |||||||||  |||| |||||||||||||||| ||| ||  |  ||| ||||| || |||||||| |||||||| ||||||||||||  |  |||    
T  37794657 tttaagtgaggaggtgggtgcttgttggggtgatttcctttagaagcgacctctgttatacaggtccatgttcgtcgtcactagctcttgtttgtgcttt 37794756  T
Q  142 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 210  Q
    |||||| ||| ||||||||| || ||||| ||| || ||||| | ||| | ||||| |||||||||||||    
T  37794757 ttgggtggtttaggtgtttacggagtttgaagggtgtgtgtcacattgtgttgagcattttccttttgat 37794826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 38305917 - 38306086
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttg--tttcattt 141  Q
    |||| |||||||||  | || |||||||||||||||| |||  | ||| ||| ||||||||||||||||| || ||||| ||||||||||  | |  |||    
T  38305917 tttaagtgaggaggtggatgcttgttggggtgatttcctttaaatacaacctctgttacacgggtccatgttcatcgtcactagctcttggttgtgcttt 38306016  T
Q  142 ttgggttgttaaggtgtttagggtgtttggaggatgcgtg-tccgttgcgatgagccttttccttttgat 210  Q
    |||||| ||| || |||||| || ||||||||| ||| ||   ||||| | |||||||||||||||||||    
T  38306017 ttgggtggtttagatgtttacggagtttggagggtgcttgcaacgttgtgttgagccttttccttttgat 38306086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 308
Target Start/End: Complemental strand, 47457139 - 47457041
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    ||||||||| | ||||||  ||||||||||  |||||| ||| || ||||||| |||||||||| |||||||||||||||   ||||||| ||||||||    
T  47457139 tctctggtggatcgggggtaaggggtgcccgtctgattaggtcctgaagtctgatggaccgatcgcttttgatttgagattgggagtcagttctttggc 47457041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 307
Target Start/End: Original strand, 13311803 - 13311900
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 307  Q
    ||||||||| |||||||   ||||||||||  ||| ||||||  |  |||||||||| |||||||||||||||| ||||||  ||||||| |||||||    
T  13311803 tctctggtggaccggggataaggggtgcccgtctggtttggtcatgtagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgg 13311900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 174
Target Start/End: Complemental strand, 6717059 - 6717024
Alignment:
Q  139 tttttgggttgttaaggtgtttagggtgtttggagg 174  Q
    |||||||||| |||||||||||||||||||||||||    
T  6717059 tttttgggtttttaaggtgtttagggtgtttggagg 6717024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 290
Target Start/End: Original strand, 25153231 - 25153264
Alignment:
Q  257 agtctggtggaccgatcacttttgatttgagatc 290  Q
    ||||||||||||||||||||||||||| ||||||    
T  25153231 agtctggtggaccgatcacttttgattcgagatc 25153264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 290
Target Start/End: Complemental strand, 27993606 - 27993573
Alignment:
Q  257 agtctggtggaccgatcacttttgatttgagatc 290  Q
    ||||||||||||||||||||||||||| ||||||    
T  27993606 agtctggtggaccgatcacttttgattcgagatc 27993573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 9349757 - 9349793
Alignment:
Q  254 taaagtctggtggaccgatcacttttgatttgagatc 290  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  9349757 taaagtctggtgggccgatcacttttgattcgagatc 9349793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 6e-56; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 210 - 367
Target Start/End: Complemental strand, 46814584 - 46814429
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  ||||||||| ||||||     
T  46814584 tctctggtgtaccgggggcaaggggtgccctgctgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctttttggc- 46814486  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagag 367  Q
     | |||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  46814485 -tcaagttggttttttggcttttgttttgtgctctttcggtggatcggatgtcgagag 46814429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 210 - 367
Target Start/End: Complemental strand, 27031957 - 27031802
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||| |||||||||||||||||     
T  27031957 tctctggtgtaccgggggaaaggggtgccctgctgatttggttctaaagtctagtgggccgatcacttttgattcgagatcgagagtcagctctttggc- 27031859  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagag 367  Q
     | |||||||||||  || |||||||||||||||||||||||||||||||||||||||    
T  27031858 -tcaagttggttttagggattttgttttgtgctctttcggtggatcggaggttgagag 27031802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 210 - 367
Target Start/End: Original strand, 24658893 - 24659048
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||  ||||||||||||||||     
T  24658893 tctctggtgtatcgggggcaaggggtgccctgctgatttggttctaaagtctggtgggccaatcacttttgattcgagatcgggagtcagctctttggc- 24658991  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagag 367  Q
     | |||||||||||| |||||| ||||||||||||||||||||||||||||| |||||    
T  24658992 -tgaagttggtttttgggctttggttttgtgctctttcggtggatcggaggtcgagag 24659048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 210 - 367
Target Start/End: Original strand, 7857617 - 7857772
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  |||||| |||||| ||     
T  7857617 tctctggtgtactgggggcgaggggtgccctgctgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcaactcttttgc- 7857715  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagag 367  Q
     | |||||||||||| | |||||||||||||||||||||||||||||| ||| |||||    
T  7857716 -tgaagttggtttttggccttttgttttgtgctctttcggtggatcggtggtcgagag 7857772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 210 - 361
Target Start/End: Complemental strand, 24684595 - 24684446
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |||||||||||| ||| ||||||    ||||| ||||||  |    
T  24684595 tctctggtgtaccgggggcgaggggtgccctactaatttgattctaaagtctggtgggccgatcacttttaattcgagatcggatgtcagttctttg--a 24684498  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     |  ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24684497 ctctagttggtttttgggcttttgttttgtgctctttcggtggatcggaggt 24684446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 210 - 361
Target Start/End: Complemental strand, 24450047 - 24449899
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||| ||| |||||| |||||||||||||||||||||||   |||||| |||||| |     
T  24450047 tctctggtgtaccgggggcgaggggtgccctgctattttggtactatagtttggtgggccgatcacttttgatttgagatcggaagtcagttctttgtc- 24449949  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     ||||||||| |||||||  ||||| ||||||||||| ||||||||||||||    
T  24449948 -ttaagttgg-tttttgggatttgtgttgtgctcttttggtggatcggaggt 24449899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 210 - 361
Target Start/End: Complemental strand, 30686021 - 30685873
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||| ||||| |||| |||||||||||||||||||||||  ||||||| ||||||  |    
T  30686021 tctctggtgtacctggggcgaggggtgccctgctaatttggtactatagtcttgtgggccgatcacttttgatttgagatcgggagtcagttctttg--a 30685924  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | ||||||| |||| ||| ||||| ||||||||||||||||| ||||||||    
T  30685923 ctcaagttggcttttgggc-tttgtgttgtgctctttcggtggttcggaggt 30685873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 210 - 361
Target Start/End: Complemental strand, 46692936 - 46692788
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||||||||||| ||||||||||| |||||||  || |||||||||| |||||||||||||||| ||||||  |||| || ||||||||     
T  46692936 tctctggtgtaccgggggcgagaggtgccctgctaatttggtgatatagtctggtgggccgatcacttttgattcgagatcgggagttagttctttggc- 46692838  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | |||||||||||| ||| ||||| ||||||||||||||||| ||||||||    
T  46692837 -tcaagttggtttttgggc-tttgtgttgtgctctttcggtggttcggaggt 46692788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 39 - 161
Target Start/End: Original strand, 52278156 - 52278279
Alignment:
Q  39 tgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt-tc 137  Q
    |||| ||||||||||||||||||||||||||||||||||||  |||||||  |||||||||| |||||||||||| |||||||  ||||||||||||  |    
T  52278156 tgttgtttaggtgaggaggcaggtgtttgttggggtgattttctttggaggaagcctttgtttcacgggtccatgttcgtcgttactagctcttgttggc 52278255  T
Q  138 atttttgggttgttaaggtgttta 161  Q
     |||||||||||||||||||||||    
T  52278256 gtttttgggttgttaaggtgttta 52278279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 41920417 - 41920564
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||| |||| |||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||| ||||||  ||||||| ||||||  |    
T  41920417 tctctggtgtactgggg-cgaggggtgccctgctaatttggtactacagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--a 41920513  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | ||||||| |||| ||| ||||| ||||||||||||||||||||||||||    
T  41920514 ctcaagttggattttgggc-tttgtgttgtgctctttcggtggatcggaggt 41920564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 361
Target Start/End: Complemental strand, 5389538 - 5389390
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||||||||||||||||||| ||| ||||||| ||| ||||||  || |||||||||||||||| ||||||  ||||||| ||||||  |    
T  5389538 tctctggtgtaccgggggcgaggggtgcccagctaatttggtactatagtctgaagggccgatcacttttgattcgagatcgggagtcagttctttg--a 5389441  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | ||||| |||||| ||| ||||| ||||||||||||||||| ||||||||    
T  5389440 ctcaagtttgtttttgggc-tttgtgttgtgctctttcggtggttcggaggt 5389390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 361
Target Start/End: Complemental strand, 31585877 - 31585729
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||| | ||| ||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||| ||||||  ||||||| ||||||  |    
T  31585877 tctctggtgtactgagggtgaggggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--a 31585780  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | |||||||||||| ||| ||||| ||||||| ||||||||| ||||||||    
T  31585779 ctcaagttggtttttgggc-tttgtgttgtgctatttcggtgggtcggaggt 31585729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 30 - 160
Target Start/End: Original strand, 16147210 - 16147341
Alignment:
Q  30 ggtggtagatgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagct 129  Q
    |||||| | |||| ||||||||||||||  ||||||  ||||||||||||| ||||||| |||||| ||||||||||| ||||| |||||||| ||||||    
T  16147210 ggtggttggtgttgtttaggtgaggaggtgggtgttgcttggggtgatttcctttggaggcagcctctgttacacgggcccatgttcgtcgtcactagct 16147309  T
Q  130 cttgttt-catttttgggttgttaaggtgttt 160  Q
    ||| ||| | ||||||||||||||||||||||    
T  16147310 cttatttgcgtttttgggttgttaaggtgttt 16147341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 5459133 - 5459275
Alignment:
Q  218 gtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagtt 317  Q
    |||||||||||||||||| ||||||| ||||||| ||| |||||||||| |||||||||||||||| ||||||  ||||||  | ||||  | | |||||    
T  5459133 gtaccgggggcgaggggtaccctgctaatttggtgctatagtctggtgggccgatcacttttgattcgagatcgggagtcaattatttg--attcaagtt 5459230  T
Q  318 ggttttttggcttttgttttgtgctctttcggtggatcggaggttg 363  Q
    | ||||| ||| ||||| |||||||||||| |||| ||||||||||    
T  5459231 gatttttgggc-tttgtgttgtgctctttcagtggttcggaggttg 5459275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 39 - 174
Target Start/End: Original strand, 7857301 - 7857439
Alignment:
Q  39 tgttatttaggtgaggaggcaggtgtttgttggggtgatttctttt-ggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt- 136  Q
    |||| |||||||||||||| |||| ||||||||||||| | ||||| |||| | | || |||||| |||||||||| |||||||| |||||||||||||     
T  7857301 tgttttttaggtgaggaggaaggtatttgttggggtgactcctttttggaggctggctctgttactcgggtccatgttcgtcgtcactagctcttgtttg 7857400  T
Q  137 cat-ttttgggttgttaaggtgtttagggtgtttggagg 174  Q
    | | ||| ||||||| |||||||||||||||||||||||    
T  7857401 cgtctttggggttgtcaaggtgtttagggtgtttggagg 7857439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 30686308 - 30686158
Alignment:
Q  65 ttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtgtttag 162  Q
    |||||||||||||||| ||| ||  |||| | ||||||||| ||||||| |||| ||| ||||||||||||  |  ||||||||| ||| |||||||||     
T  30686308 ttgttggggtgatttcctttagaagcagcatctgttacacgagtccatgttcgttgtcactagctcttgtttgtgctttttgggtggtttaggtgtttac 30686209  T
Q  163 ggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgatct 212  Q
    || ||||||||| | |||||| ||||| | |||||||||||||||||||||    
T  30686208 ggagtttggagggttcgtgtcacgttgtgttgagccttttccttttgatct 30686158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 31586186 - 31586016
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt---tcatt 140  Q
    |||| |||||||||  |||| |||||||||||||||| ||| ||   | ||| ||||||||||||||||| |||||||| || |||||||||   |  ||    
T  31586186 tttaagtgaggaggtgggtgcttgttggggtgatttcctttagaagaaacctctgttacacgggtccatgttcgtcgtcactggctcttgttttgtgctt 31586087  T
Q  141 tttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 210  Q
    ||||||| ||| |||||||||  | ||||||||| |||||||| ||||  | |||||||||||||||||||    
T  31586086 tttgggtggtttaggtgtttacagagtttggagggtgcgtgtcacgttatgttgagccttttccttttgat 31586016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 308
Target Start/End: Complemental strand, 9313406 - 9313308
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    ||||| ||||| |||| | |||||||||||| |||||||||| ||||||||| |||| | |||||||||||||| ||||||  ||||||| ||||||||    
T  9313406 tctctcgtgtatcgggcgtgaggggtgcccttctgatttggtcctaaagtctagtgggctgatcacttttgattcgagatcgggagtcagttctttggc 9313308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 6583314 - 6583253
Alignment:
Q  229 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 290  Q
    |||||||||| | |||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  6583314 gaggggtgcctttctgatttggtcctaaagtctggtggaccgatcacttttgattcgagatc 6583253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 184
Target Start/End: Complemental strand, 46814910 - 46814750
Alignment:
Q  27 gggggtggtagatgttatttaggtgaggaggcaggtgtttgttggggtgattt--cttttggagacagcctttgttacacgggtccatggtcgtcgtcgc 124  Q
    |||||||| ||| ||| |||||||||||| | ||||| |||||||  |  |||  | |||||||||| ||| | || |||||||||||| | |||||| |    
T  46814910 gggggtggcagacgttgtttaggtgaggaagtaggtgcttgttggtttttttttccctttggagacaacctctatttcacgggtccatgtttgtcgtcac 46814811  T
Q  125 tagctcttgttt-catttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 184  Q
    | |||||||||  |  |||||||||||| |||||||||||||||||||||| |||||||||    
T  46814810 ttgctcttgttggcgcttttgggttgtttaggtgtttagggtgtttggagggtgcgtgtcc 46814750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 211
Target Start/End: Complemental strand, 10785748 - 10785582
Alignment:
Q  50 tgaggaggcaggtgtttgttgggg-tgatttcttttggagacagcctttgttacacgggtccatggt--cgtcgtcgctagctcttgttt-catttttgg 145  Q
    |||||||||| |||||| |||||| ||||||||||||||| | |||| ||||||  |||||  ||||  ||||||| ||| | ||||||| |||||||||    
T  10785748 tgaggaggcaagtgtttattgggggtgatttcttttggaggctgcctctgttacttgggtct-tggtttcgtcgtcactaacccttgtttgcatttttgg 10785650  T
Q  146 g-ttgttaaggtgtttagggtgtttggaggatgcgtgt-ccgttgcgatgagccttttccttttgatc 211  Q
    | ||||||||||||||||||||||||||||  ||  || || ||| | ||||||||||||||||||||    
T  10785649 ggttgttaaggtgtttagggtgtttggagggagcaggtcccattgagctgagccttttccttttgatc 10785582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 46693244 - 46693152
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 136  Q
    |||| |||||||||  ||||||||||||||||||||| ||| ||  || ||| |||||||||||| |||| |||||||| |||||||||||||    
T  46693244 tttaagtgaggaggtgggtgtttgttggggtgatttcctttagaagcaacctctgttacacgggtacatgttcgtcgtcactagctcttgttt 46693152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 24450357 - 24450214
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt----cat 139  Q
    |||| ||||||||||  ||| |||||||||||||||| ||| ||  || ||||||||| | ||||||||| |||||||| |||||||||||||      |    
T  24450357 tttaagtgaggaggcgtgtgcttgttggggtgatttcctttagaagcaacctttgttaaatgggtccatgttcgtcgtctctagctcttgtttgtgcttt 24450258  T
Q  140 ttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc 183  Q
    |||||||| ||| ||||||||| || |||||| || ||||||||    
T  24450257 ttttgggtggtttaggtgtttacggagtttggggggtgcgtgtc 24450214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 175
Target Start/End: Original strand, 27101966 - 27102089
Alignment:
Q  45 ttaggtgaggaggcaggtgtttgttg-gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcattttt 143  Q
    |||||||||||||| ||||| ||||| ||||  |||||||||||| | |||| |||||| ||||||| |  |||||||| | |||||||||||           
T  27101966 ttaggtgaggaggcgggtgtctgttgagggtattttcttttggaggcggcctctgttactcgggtccttcttcgtcgtcacgagctcttgttt------- 27102058  T
Q  144 gggttgttaaggtgtttagggtgtttggagga 175  Q
     |||||||||||||||||||||||||||||||    
T  27102059 -ggttgttaaggtgtttagggtgtttggagga 27102089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 299
Target Start/End: Original strand, 4651744 - 4651833
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 299  Q
    ||||||||||||||||||  ||||||||||| |||| || ||||  |||||||| || |||||||||||||||| ||||||  |||||||    
T  4651744 tctctggtgtaccgggggtaaggggtgcccttctgaatttgttccgaagtctggggggccgatcacttttgattcgagatcgggagtcag 4651833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 17033571 - 17033647
Alignment:
Q  231 ggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 307  Q
    |||||||||| |||||||||| ||| |||||||||| |||||||||||||| | ||||||  ||||||| |||||||    
T  17033571 ggggtgcccttctgatttggtcctatagtctggtgggccgatcacttttgaatcgagatcgggagtcagttctttgg 17033647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 20113946 - 20113854
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 136  Q
    |||| ||||||||||  ||| |||||||||||||||| ||| ||  || ||| |||||||||||| |||| |||||||| |||||||||||||    
T  20113946 tttaagtgaggaggcgagtgcttgttggggtgatttcctttagaagcaacctatgttacacgggttcatgttcgtcgtctctagctcttgttt 20113854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 34774847 - 34774907
Alignment:
Q  222 cgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgat 282  Q
    |||||| ||| |||||||| |||||||||| |||| |||||||||||||||||||||||||    
T  34774847 cgggggtgagtggtgcccttctgatttggtcctaacgtctggtggaccgatcacttttgat 34774907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 283
Target Start/End: Complemental strand, 20113638 - 20113565
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 283  Q
    |||| ||||||||||||||||||||||||||||| |||||||  || |||||| |||  |||||| ||||||||    
T  20113638 tctcgggtgtaccgggggcgaggggtgccctgctaatttggtattatagtctgctgggacgatcatttttgatt 20113565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 306
Target Start/End: Original strand, 19598600 - 19598696
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttg 306  Q
    ||||||||| |||| |||  ||||||||||  ||| || ||| || ||||||||||| |||||| ||||||||| |||||| |||||||| ||||||    
T  19598600 tctctggtggaccgagggtaaggggtgcccgtctggttgggtcctgaagtctggtgggccgatcgcttttgattcgagatcgagagtcagttctttg 19598696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 24684901 - 24684809
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 136  Q
    |||| |||||||||| |||| ||||||||||||| || ||||||  || ||| ||||||| |||||| || || ||||| |||||||||||||    
T  24684901 tttatgtgaggaggcgggtggttgttggggtgatgtcctttggaagcaacctatgttacatgggtccttgttcatcgtcactagctcttgttt 24684809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 40933839 - 40933907
Alignment:
Q  222 cgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 290  Q
    |||||| |||||||| ||| ||| |||||||| ||||| ||||| ||||||| ||||||||||||||||    
T  40933839 cgggggtgaggggtgtcctcctgttttggttcgaaagtttggtgaaccgatcgcttttgatttgagatc 40933907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 41920137 - 41920228
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 136  Q
    |||| ||||||| ||||||| |||||||| ||||||| ||| ||  || ||| | ||||||||||||||| |||||||| |||||||||||||    
T  41920137 tttaagtgaggatgcaggtgcttgttggg-tgatttcctttagaagcaacctctattacacgggtccatgttcgtcgtcactagctcttgttt 41920228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 175
Target Start/End: Complemental strand, 9313649 - 9313517
Alignment:
Q  49 gtgaggaggcaggtgtttgttgggg-tgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgt-ttcattttt--- 143  Q
    |||||||||  || ||||||||||| |||||||||||| || |||||||||||||  |||||| || | ||||||  |||||||||| | | |||||       
T  9313649 gtgaggaggagggcgtttgttgggggtgatttcttttgaaggcagcctttgttacttgggtccttgtttgtcgtcaatagctcttgtatgcgtttttttg 9313550  T
Q  144 -gggttgttaaggtgtttagggtgtttggagga 175  Q
     |||||| ||||||||||| |||||||||||||    
T  9313549 ggggttgctaaggtgtttatggtgtttggagga 9313517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 24658566 - 24658725
Alignment:
Q  27 gggggtggtagatgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggt-cgtcgtcgct 125  Q
    |||||||| || |||  |||||||||||||   | || ||||||||||| |||| ||||||| || ||| |||| ||  |||||||| | ||||||| ||    
T  24658566 gggggtggcaggtgtcgtttaggtgaggagatggatgcttgttggggtgttttcctttggagccaacctctgtttcataggtccatgattcgtcgtcact 24658665  T
Q  126 agctcttgttt-catttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 184  Q
     |||||||||  |  |||||||||||| || ||||||||||||||||||| || ||||||    
T  24658666 tgctcttgttggcgcttttgggttgtttagatgtttagggtgtttggagggtgtgtgtcc 24658725  T

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Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 19598342 - 19598440
Alignment:
Q  71 gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgttt 169  Q
    |||||||| ||||||||||| |||| |||||  | |||||||  |||| |||||||  ||| |||| | |||||||| | |||||||||||||||||||    
T  19598342 gggtgattccttttggagaccgcctctgttattcaggtccatattcgttgtcgctacatctagtttgagttttgggtggctaaggtgtttagggtgttt 19598440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 27905411 - 27905457
Alignment:
Q  245 atttggttctaaagtctggtggaccgatcacttttgatttgagatca 291  Q
    |||||| | |||||||||||||||||||||||||||||| |||||||    
T  27905411 atttgggtttaaagtctggtggaccgatcacttttgattcgagatca 27905457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 42374131 - 42374216
Alignment:
Q  214 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 299  Q
    |||||||||| |||   |||||||||| ||||||||||  |   |||||||||||||||| ||||||||||||||||  |||||||    
T  42374131 tggtgtaccgagggtttggggtgcccttctgatttggtcatgttgtctggtggaccgatcgcttttgatttgagatcgggagtcag 42374216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 184
Target Start/End: Complemental strand, 27032231 - 27032147
Alignment:
Q  101 acacgggtccatggtcgtcgtcgctagctcttgtt-tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 184  Q
    |||||||||  || |||||||| || ||||||||| ||  |||||||||||| |||||| ||||||||||||||| || ||||||    
T  27032231 acacgggtctttgttcgtcgtcacttgctcttgttatcgcttttgggttgtttaggtgtgtagggtgtttggagggtgtgtgtcc 27032147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 38545080 - 38545017
Alignment:
Q  121 tcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 184  Q
    |||||||||||||||| | |||||||| |||||| ||||||||||| || |||| || ||||||    
T  38545080 tcgctagctcttgtttgagttttgggtcgttaagatgtttagggtgctttgagggtgtgtgtcc 38545017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 307
Target Start/End: Original strand, 27102154 - 27102252
Alignment:
Q  210 tctctggtgtaccgggggcgagggg-tgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 307  Q
    |||||||||||||| ||| |||||| |||||| ||| ||||||   |||||||   || |||||||||||||||| ||||||  ||||||| |||||||    
T  27102154 tctctggtgtaccgagggtgagggggtgcccttctgttttggtctcaaagtctaacgggccgatcacttttgattcgagatcgggagtcagttctttgg 27102252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 38544828 - 38544758
Alignment:
Q  237 ccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 307  Q
    |||| ||||||||||  | ||||||||||| |||||| ||||||||| ||||||  ||||||| |||||||    
T  38544828 cccttctgatttggtcatgaagtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttgg 38544758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 32864659 - 32864598
Alignment:
Q  229 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 290  Q
    |||||||||||| | |||||||| |||||| ||||||| || ||||||||| ||| ||||||    
T  32864659 gaggggtgcccttccgatttggtcctaaaggctggtgggccaatcacttttaattcgagatc 32864598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 17033273 - 17033361
Alignment:
Q  71 gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtt 159  Q
    |||||||||||||||||| | |||| |||||   ||||||||  ||||||||| | ||| |||||| | ||||||||| || |||||||    
T  17033273 gggtgatttcttttggaggcggcctatgttatttgggtccattttcgtcgtcgttggctattgtttgagttttgggttattgaggtgtt 17033361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 4e-51; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 210 - 367
Target Start/End: Complemental strand, 23328467 - 23328312
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||  |||| |||| ||||||     
T  23328467 tctctggtgtaccgggggcgaggggtgccctgttgatttggttctaaagtttggtggaccgatcacttttgattcgagatcgggagttagctttttggc- 23328369  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagag 367  Q
     | ||||||||||||  ||||||||||||||||||||||||||||||||||| |||||    
T  23328368 -tcaagttggtttttgagcttttgttttgtgctctttcggtggatcggaggtcgagag 23328312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 226 - 367
Target Start/End: Original strand, 45398776 - 45398915
Alignment:
Q  226 ggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggtttttt 325  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||||||||  | ||||||||||||||     
T  45398776 ggcgaggggtgccctgctgatttggatttaaagtctggtggaccgatcacttttgattcgagatcgagagtcagctctttg--atttaagttggtttttg 45398873  T
Q  326 ggcttttgttttgtgctctttcggtggatcggaggttgagag 367  Q
    |||||||||||| |||||||||| |||||||||||| |||||    
T  45398874 ggcttttgttttatgctctttcgatggatcggaggtcgagag 45398915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 210 - 360
Target Start/End: Complemental strand, 40023688 - 40023541
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||| |||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||  |||||   ||||||||     
T  40023688 tctctagtgtaccgggggcgaggg-tgccctgctgattttgttttaaagtctggtggaccgatcacttttgattcgagatcgggagtcgattctttggc- 40023591  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggagg 360  Q
     |||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  40023590 -ttaagttggtttttgggcttttgttttgtgctctttcggtggatcagagg 40023541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 211 - 361
Target Start/End: Complemental strand, 2392622 - 2392475
Alignment:
Q  211 ctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaa 310  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| || |||||||||||||||||||||||| |||||    |||||| |||||| |      
T  2392622 ctctggtgtaccgggggcgaggggtgccctgctaatttggtactatagcctggtggaccgatcacttttgattcgagattggaagtcagttctttgtc-- 2392525  T
Q  311 ttaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  2392524 ttaagttggtttttgggc-tttgtgttgtgctctttcggtggatcggaggt 2392475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 19176467 - 19176615
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||| ||||||||| | ||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||  ||||||| ||||||  |    
T  19176467 tctctgatgtaccgggagtgaggg-tgccctgctaatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--a 19176563  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | |||||||||||| |||||||| |||||||||||| ||||||||||||||    
T  19176564 ctcaagttggtttttgggcttttgatttgtgctcttttggtggatcggaggt 19176615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 210 - 361
Target Start/End: Complemental strand, 34475871 - 34475723
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||||||||||| ||||||  ||||||  ||||  | |    
T  34475871 tctctggtgtaccgggggcgaggggtgccctgctaatttgtttctatagtctggtgggccgatcacttttgattcgagatcgggagtcaaatctt--gga 34475774  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
    ||||||||| ||||| ||| ||||| ||||||||||||||||||| ||||||    
T  34475773 attaagttgatttttgggc-tttgtgttgtgctctttcggtggattggaggt 34475723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 210 - 363
Target Start/End: Complemental strand, 9584170 - 9584019
Alignment:
Q  210 tctctggtgtaccgggggcgag-gggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    ||||| |||||||||||| ||| |||||||||||| ||||| | ||||||||||||||| ||||||||||||||| ||||||  ||||||| |||||| |    
T  9584170 tctcttgtgtaccggggg-gagagggtgccctgctaatttgatactaaagtctggtggatcgatcacttttgattcgagatcgggagtcagttctttgtc 9584072  T
Q  309 aattaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttg 363  Q
      | ||| |||||||| ||||||||||||||| ||||||||||||||||||||||    
T  9584071 --tcaagatggtttttgggcttttgttttgtgatctttcggtggatcggaggttg 9584019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 20611747 - 20611895
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||||||||||||||||||||||| |||| || ||| ||| || ||| ||||||| |||||||| ||||||  ||||||| ||||||  |    
T  20611747 tctctggtgtaccgggggcgaggggtgccctgctaatttcgtactatagtttgttgggccgatcatttttgattcgagatcgggagtcagttctttg--a 20611844  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     |||||||||||||| ||| ||||  ||||||||||||||||||||||||||    
T  20611845 cttaagttggtttttgggc-tttgcgttgtgctctttcggtggatcggaggt 20611895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 39 - 212
Target Start/End: Original strand, 37123040 - 37123218
Alignment:
Q  39 tgttatttaggtgaggaggcaggtgtttgttg-gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt- 136  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||| |||| | |||| || ||| ||||||| || |||||||| |||||||||||||     
T  37123040 tgttgtttaggtgaggaggcaggtgtttgttgagggtgatttctttcggaggcggcctctggtactcgggtccttgttcgtcgtcactagctcttgtttg 37123139  T
Q  137 --catttttgggttgttaaggtgtttagggtgtttggaggatgcgtg-tccgttgcgatgagccttttccttttgatct 212  Q
        |||| |||||||||||| ||||||||||||||||||| ||| | ||| ||| | |||| ||||||||||||||||    
T  37123140 tgttttttggggttgttaaggagtttagggtgtttggaggaagcgggttccattgagttgagtcttttccttttgatct 37123218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 60 - 207
Target Start/End: Complemental strand, 40023975 - 40023829
Alignment:
Q  60 ggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtt 159  Q
    ||||||||| ||||||||| ||||||||| | | || |||| | ||||||| || ||||| || |||||||| ||||  || ||||||||||||||||||    
T  40023975 ggtgtttgtgggggtgattccttttggag-ctgactctgttgctcgggtccttgttcgtcctcactagctctcgtttttttgttgggttgttaaggtgtt 40023877  T
Q  160 tagggtgtttggaggatgcgtgtccgttgcgatgagccttttcctttt 207  Q
    || |||||||||||| ||||||||||||| ||||||||||||||||||    
T  40023876 taaggtgtttggagggtgcgtgtccgttgtgatgagccttttcctttt 40023829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 39 - 210
Target Start/End: Original strand, 47235366 - 47235541
Alignment:
Q  39 tgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt-- 136  Q
    |||| |||| |||||||||  |||||| |||||||||||||| ||| ||  || ||||||||||||||||||||| || ||||| |||||||||||||      
T  47235366 tgttgtttaagtgaggaggtgggtgttggttggggtgatttcctttagaagcaacctttgttacacgggtccatgttcatcgtctctagctcttgtttgt 47235465  T
Q  137 -catttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 210  Q
       ||||||||| ||| ||||||||| || ||||||||| |||||||| ||||| | |||||||||||||||||||    
T  47235466 gtttttttgggtggtttaggtgtttacggagtttggagggtgcgtgtcacgttgtgttgagccttttccttttgat 47235541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 245 - 361
Target Start/End: Original strand, 43012374 - 43012488
Alignment:
Q  245 atttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctct 344  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||  ||||||| ||||||  | | ||||||||||||  ||||||||||||||||||    
T  43012374 atttggttctaaagtctggtggcccgatcacttttgattcgagatcgggagtcagttctttg--actcaagttggtttttgagcttttgttttgtgctct 43012471  T
Q  345 ttcggtggatcggaggt 361  Q
    ||||||| ||| |||||    
T  43012472 ttcggtgaatcagaggt 43012488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 217 - 361
Target Start/End: Original strand, 45163824 - 45163967
Alignment:
Q  217 tgtaccgggggcgaggggtgccctgctgatttggttctaaagtct--ggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaa 314  Q
    ||||||| ||||||||||||||||||| ||||||| ||| |||||   |||| |||||||||||||||| |||||||  |||||| | |||| |  ||||    
T  45163824 tgtaccgagggcgaggggtgccctgctaatttggtactatagtcttgtgtgggccgatcacttttgattcgagatcagaagtcagttttttgtc--ttaa 45163921  T
Q  315 gttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  45163922 gttggtttttgggc-tttgtgttgtgctctttcggtggatcggaggt 45163967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 211 - 289
Target Start/End: Complemental strand, 2394369 - 2394291
Alignment:
Q  211 ctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagat 289  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| || |||||||||||||||||||||||| |||||    
T  2394369 ctctggtgtaccgggggcgaggggtgccctgctaatttggtactatagcctggtggaccgatcacttttgattcgagat 2394291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 44 - 209
Target Start/End: Original strand, 25647336 - 25647507
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggg--gtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcat 139  Q
    ||||||||||||||| |||||||  ||||  ||||||  ||| ||||   ||||||||||| ||||||| || |||||||| ||||||||||||  | ||    
T  25647336 tttaggtgaggaggcgggtgttttgtgggtggtgattcatttgggaggttgcctttgttactcgggtccttgttcgtcgtcactagctcttgttcgtgat 25647435  T
Q  140 ttttg-ggttgttaaggtgtttagggtgtttggaggatgcgtgt-ccgttgcgatgagccttttccttttga 209  Q
    ||||  ||||||||||||||||||||||||||||||| ||| || |||||| | || |||||||||||||||    
T  25647436 ttttaaggttgttaaggtgtttagggtgtttggaggaagcgagtcccgttgagttgtgccttttccttttga 25647507  T

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Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 14193908 - 14193983
Alignment:
Q  214 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagat 289  Q
    |||||||||||| | |||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  14193908 tggtgtaccgggagtgaggggtgcccttctgatttggtcctaaagtctggcggaccgatcacttttgattcgagat 14193983  T

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Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 45 - 210
Target Start/End: Original strand, 20611439 - 20611608
Alignment:
Q  45 ttaggtgaggaggcaggtgtttgttg-gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 141  Q
    ||||||||||| | ||||| |||||  |||||||||| ||| ||  || ||| ||||||||||||||||| | |||||  ||||||||||||  |  |||    
T  20611439 ttaggtgaggatgtaggtggttgttatgggtgatttcctttagaagcaacctctgttacacgggtccatgtttgtcgttactagctcttgtttgtgcttt 20611538  T
Q  142 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 210  Q
    |||||| ||| ||||||||| |  ||||||||| |||||||| ||||| | |||||||||||||||||||    
T  20611539 ttgggtagtttaggtgtttacgaagtttggagggtgcgtgtcacgttgtgttgagccttttccttttgat 20611608  T

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Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 45163504 - 45163596
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 136  Q
    |||| |||||||||| ||||| ||||||||||||||| ||| ||  ||  |||||||||||||||||||| |||||||| ||| |||||||||    
T  45163504 tttaagtgaggaggcgggtgtatgttggggtgatttcctttagaagcaatctttgttacacgggtccatgttcgtcgtctctaactcttgttt 45163596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 92 - 210
Target Start/End: Original strand, 14193641 - 14193763
Alignment:
Q  92 gcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattttt-gggttgttaaggtgtttagggtgtttggaggatgcgtgt-ccgtt 187  Q
    ||||||||||| ||||||| |  |||||||| ||||||||||||    |||||| |||||||||||||||||||||| ||||||||| ||| || |||||    
T  14193641 gcctttgttactcgggtccttattcgtcgtcactagctcttgttcgcgatttttggggttgttaaggtgtttagggtttttggaggaagcgagtcccgtt 14193740  T
Q  188 gcgatgagccttttccttttgat 210  Q
    | | || ||||||||||||||||    
T  14193741 gagttgtgccttttccttttgat 14193763  T

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Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 257 - 361
Target Start/End: Original strand, 17550968 - 17551069
Alignment:
Q  257 agtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtggatcg 356  Q
    |||||||||| |||||||||||||||| ||||||  ||||||| ||||||  | | |||||||||||| ||| ||||| ||||||||||||| || ||||    
T  17550968 agtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--actcaagttggtttttgggc-tttgtgttgtgctctttcgatgcatcg 17551064  T
Q  357 gaggt 361  Q
    |||||    
T  17551065 gaggt 17551069  T

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Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 49 - 183
Target Start/End: Complemental strand, 34476173 - 34476037
Alignment:
Q  49 gtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttggg 146  Q
    |||||||||  ||||||||||||||||||||| ||   |  || ||| ||||||||||||||||| |||||||| ||||||||||||  |  |||||| |    
T  34476173 gtgaggaggggggtgtttgttggggtgatttccttaaaaagcaacctatgttacacgggtccatgttcgtcgtctctagctcttgtttgtgctttttgag 34476074  T
Q  147 ttgttaaggtgtttagggtgtttggaggatgcgtgtc 183  Q
    | ||| ||||||||| || ||||||||| || |||||    
T  34476073 tggtttaggtgtttacggagtttggagggtgggtgtc 34476037  T

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Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 290
Target Start/End: Original strand, 25647648 - 25647728
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 290  Q
    |||||||||||||||| | || ||||||||| |||||||||| ||||||||||  || || ||||||||||||| ||||||    
T  25647648 tctctggtgtaccgggagtgaagggtgcccttctgatttggtcctaaagtctgacgggcctatcacttttgattcgagatc 25647728  T

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Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 14879421 - 14879479
Alignment:
Q  232 gggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 290  Q
    ||||||||| |||||| ||| |||||||||||||| |||||||||||||||| ||||||    
T  14879421 gggtgcccttctgattgggtcctaaagtctggtgggccgatcacttttgattcgagatc 14879479  T

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Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 1653276 - 1653176
Alignment:
Q  74 tgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggag 173  Q
    |||||||| ||||||   |||| |||||  |||||||||  |||| ||||||||||||||||| | |||| |||||||| ||||||||| |||||| |||    
T  1653276 tgatttctattggaggttgcctctgttattcgggtccatactcgttgtcgctagctcttgtttgagttttaggttgttatggtgtttagagtgttttgag 1653177  T
Q  174 g 174  Q
    |    
T  1653176 g 1653176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 19176159 - 19176251
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 136  Q
    |||| ||| |||||| |||| |||||||||||||||| ||||||   | |||||||||||||||||  || || ||||| |||||||||||||    
T  19176159 tttaagtgtggaggcgggtgcttgttggggtgatttcctttggaagtaacctttgttacacgggtctttgttcatcgtcactagctcttgttt 19176251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 31482868 - 31482996
Alignment:
Q  230 aggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggct 329  Q
    |||||| |||| || ||||||||||| ||||||| || | |||||||||||||| ||||||  || |||  ||||    |||||||||| ||||| |||     
T  31482868 aggggtaccctactaatttggttctatagtctggcgggcggatcacttttgattcgagatcgggaatcaaatctt--aaaattaagttgatttttgggc- 31482964  T
Q  330 tttgttttgtgctctttcggtggatcggaggt 361  Q
    ||||| ||||||||||||||||||| ||||||    
T  31482965 tttgtgttgtgctctttcggtggattggaggt 31482996  T

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Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 367
Target Start/End: Original strand, 21342603 - 21342654
Alignment:
Q  316 ttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagag 367  Q
    ||||||||| ||||||||||||||||||||||| |||||| ||||| |||||    
T  21342603 ttggtttttaggcttttgttttgtgctctttcgatggatcagaggtcgagag 21342654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 307
Target Start/End: Complemental strand, 14755380 - 14755285
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 307  Q
    ||||||||||||||  || ||||||||||||  |  ||| || |||||||||||||| ||||||||||||||||  |||||  ||||||| |||||||    
T  14755380 tctctggtgtaccgaaggtgaggggtgccctttt--ttttgtgctaaagtctggtgggccgatcacttttgattcaagatcgggagtcagttctttgg 14755285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 283
Target Start/End: Complemental strand, 30935507 - 30935434
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 283  Q
    ||||||||| ||||||||  ||||||||||| ||||||||||| | |||| |||||| | |||| |||||||||    
T  30935507 tctctggtggaccgggggtaaggggtgcccttctgatttggttttgaagtttggtgggctgatcgcttttgatt 30935434  T

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Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 307
Target Start/End: Original strand, 37123346 - 37123443
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 307  Q
    |||||| |||||||  || ||||||||||||  || |||||| ||||| | |||||| |||||||||||||||| |||||   ||||||| |||||||    
T  37123346 tctctgatgtaccgaaggagaggggtgcccttatgttttggtcctaaattttggtgggccgatcacttttgattcgagattgggagtcagttctttgg 37123443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 2394683 - 2394591
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 136  Q
    |||| |||||||||| |||| |||||||||||||||| ||  ||  || ||||||||||| ||||||||  | |||||| ||| |||||||||    
T  2394683 tttaagtgaggaggcgggtgcttgttggggtgatttccttaagaagcaacctttgttacatgggtccatatttgtcgtctctaactcttgttt 2394591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 307
Target Start/End: Complemental strand, 33144020 - 33143969
Alignment:
Q  256 aagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 307  Q
    |||||||||||| ||||||||||||||| ||||||  ||||||| |||||||    
T  33144020 aagtctggtggatcgatcacttttgattcgagatcgggagtcagttctttgg 33143969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 210 - 308
Target Start/End: Original strand, 47945669 - 47945768
Alignment:
Q  210 tctctggtgtacc-gggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    ||||||||| ||| |||||  ||||||||||  ||| || ||| |||||||| ||||| |||||||||||||||| ||||||  ||||||| | ||||||    
T  47945669 tctctggtggaccagggggtaaggggtgcccgtctggttgggtcctaaagtccggtgggccgatcacttttgattcgagatcgggagtcagttatttggc 47945768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 362
Target Start/End: Complemental strand, 1652971 - 1652855
Alignment:
Q  242 ctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgc 341  Q
    |||||||||| || || ||| |||| |||||||||||||||| ||||||| |||| || |||||||   | ||||| | |||| ||||||  ||| |||     
T  1652971 ctgatttggtcctgaactcttgtgggccgatcacttttgattcgagatcaggagttagttctttgg--ttcaagtttggttttgggcttt--tttggtgt 1652876  T
Q  342 tctttcggtggatcggaggtt 362  Q
    |||||||||||| ||||||||    
T  1652875 tctttcggtggaccggaggtt 1652855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 47235686 - 47235720
Alignment:
Q  216 gtgtaccgggggcgaggggtgccctgctgatttgg 250  Q
    |||||||||||||||||||||||||||| ||||||    
T  47235686 gtgtaccgggggcgaggggtgccctgctaatttgg 47235720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 4464368 - 4464323
Alignment:
Q  39 tgttatttaggtgaggaggcaggtgtttgttggggtgatttctttt 84  Q
    |||| |||||||||| |||| |||||||| ||||||||||||||||    
T  4464368 tgttgtttaggtgagtaggcgggtgtttgatggggtgatttctttt 4464323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 47235729 - 47235810
Alignment:
Q  277 tttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
    ||||||| |||||| |||||| | |||||| |  |||||||||||||| |||||| || || ||||||||||||||||| |||||    
T  47235729 tttgattcgagatcgagagtcggttctttgac--ttaagttggtttttgggcttt-gtgttttgctctttcggtggatcagaggt 47235810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 9e-49; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 210 - 367
Target Start/End: Complemental strand, 15821496 - 15821341
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||  ||||||||||||||  |    
T  15821496 tctctggtgtaccgagggcgaggggtgccctgctgatttggttctaaagtctggtgggctgatcacttttgattcgagatcgggagtcagctctttg--a 15821399  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagag 367  Q
     ||| |||||||||| |||||||||||||||||||||| ||||||| ||||| |||||    
T  15821398 cttatgttggtttttgggcttttgttttgtgctctttcagtggatcagaggtcgagag 15821341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 210 - 361
Target Start/End: Complemental strand, 34389122 - 34388974
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||| ||||||||||||||| ||||||  |    
T  34389122 tctctggtgtaccaggggcgaggggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcaagagtcagttctttg--a 34389025  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | |||||||||||| ||| ||||| ||||||| ||||||||||||| ||||    
T  34389024 ctcaagttggtttttgggc-tttgtgttgtgctatttcggtggatcgtaggt 34388974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 214 - 361
Target Start/End: Original strand, 36630805 - 36630950
Alignment:
Q  214 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaatta 313  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||| ||||||  | ||||| ||||||  | |      
T  36630805 tggtgtaccgggggcgaggggtgccctgctaatttggttctaaagtctggtgggccgatcacttttaattcgagatcgggtgtcagttctttg--actct 36630902  T
Q  314 agttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||||||    
T  36630903 agtttgtttttgggcttttgttttgtgctctttcgatggatcggaggt 36630950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 210 - 363
Target Start/End: Original strand, 9519463 - 9519613
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||| ||||| |||| ||||||| |||||||| ||||||  ||||||| ||||||  |    
T  9519463 tctctggtgtaccgggggtgaggggtgccctgctaatttggtactatagtctagtgggccgatcagttttgattcgagatcgggagtcagttctttg--a 9519560  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttg 363  Q
     | |||||||||||| ||| ||||| ||||||||||||||||| ||||||||||    
T  9519561 ctcaagttggtttttgggc-tttgtgttgtgctctttcggtgggtcggaggttg 9519613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 210 - 363
Target Start/End: Complemental strand, 32066412 - 32066262
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||| |||||||||||||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||| || |||  ||||||||||||||  |    
T  32066412 tctctagtgtaccgggggcgaggggtgccctgctaatttggtgctatagtctggtgggccgatcacttttgattcgaaatcgggagtcagctctttg--a 32066315  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttg 363  Q
     |  ||||||||||| ||| ||||| ||||||||||||||||| || |||||||    
T  32066314 ctccagttggtttttgggc-tttgtgttgtgctctttcggtggttcagaggttg 32066262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 361
Target Start/End: Complemental strand, 37986975 - 37986827
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||||||||||||||||||||||| |||||||  || |||||||||| || |||| |||||||| ||||||  ||||||| ||||||  |    
T  37986975 tctctggtgtaccgggggcgaggggtgccctgctaatttggtgttatagtctggtgggccaatcatttttgattcgagatcgggagtcagttctttg--a 37986878  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | ||||||||||||  || ||||| ||||||||||||||||| ||||||||    
T  37986877 ctcaagttggtttttgtgc-tttgtgttgtgctctttcggtggttcggaggt 37986827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 210 - 361
Target Start/End: Complemental strand, 24995512 - 24995364
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||| |||||||||||||| | |||| ||||||| ||| |||||||||| |||||||||||||||| ||||||  ||||||| ||||||  |    
T  24995512 tctctggtgtactgggggcgaggggtgtcttgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--a 24995415  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | |||||||||||| ||| ||||| |||||||||||| |||| || |||||    
T  24995414 ctcaagttggtttttgggc-tttgtgttgtgctctttcagtgggtcagaggt 24995364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 210 - 361
Target Start/End: Complemental strand, 31207478 - 31207331
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||||||||||| |||||||||| ||||||||| ||||||| ||| |||||||||| |||||||||||||||| ||||||  ||||||| ||||||  |    
T  31207478 tctctggtgtaccaggggcgaggg-tgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--a 31207382  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | |||||||  ||||||  ||||| ||||||| ||||||||||||||||||    
T  31207381 ctcaagttgg-attttgggatttgtgttgtgctttttcggtggatcggaggt 31207331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 39 - 174
Target Start/End: Complemental strand, 10248982 - 10248845
Alignment:
Q  39 tgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttca 138  Q
    |||| ||||||||||||||  |||||||| |||||||||||||| |||||   | |  |||||| ||||||| |  |||||||| ||||||||||||| |    
T  10248982 tgttgtttaggtgaggaggagggtgtttgctggggtgatttcttctggaggttgtcgctgttactcgggtccttattcgtcgtcactagctcttgtttga 10248883  T
Q  139 --tttttgggttgttaaggtgtttagggtgtttggagg 174  Q
      ||||||| ||||||||||||||| ||||||||||||    
T  10248882 gttttttggattgttaaggtgtttaaggtgtttggagg 10248845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 37 - 175
Target Start/End: Complemental strand, 17657438 - 17657297
Alignment:
Q  37 gatgttatttaggtgaggaggcaggtgtttgttgg-ggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt 135  Q
    |||||| ||||||||||||||| | |||| ||||| |||||||| |||||||| | |||| |||||  ||||||| || | || ||| ||||||||||||    
T  17657438 gatgttgtttaggtgaggaggcggatgttcgttggaggtgatttgttttggaggctgcctctgttattcgggtccttgtttgttgtcactagctcttgtt 17657339  T
Q  136 t-catttttgggt-tgttaaggtgtttagggtgtttggagga 175  Q
    | ||||||||||  |||||||||||||| |||||||||||||    
T  17657338 tgcatttttgggactgttaaggtgtttatggtgtttggagga 17657297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 34389403 - 34389311
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 136  Q
    |||| |||||||||| |||| |||||||||||||||| ||| ||  || ||| ||||||||||||||||| |||||||| |||||||||||||    
T  34389403 tttaagtgaggaggcgggtgcttgttggggtgatttcctttagaagcaacctctgttacacgggtccatgttcgtcgtcactagctcttgttt 34389311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 36630493 - 36630585
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 136  Q
    |||| |||||||||| |||| |||||||||||||||| ||||||  || ||| |||||||||||||| || |||||||| |||||||||||||    
T  36630493 tttatgtgaggaggcgggtgcttgttggggtgatttcctttggaagcaacctctgttacacgggtccttgttcgtcgtcactagctcttgttt 36630585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 308
Target Start/End: Complemental strand, 10248670 - 10248572
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    |||||||||||||||||| |||||||| ||| || |||| || ||||| | |||||||||||||||||||||||  |||||  ||||||| ||||||||    
T  10248670 tctctggtgtaccgggggtgaggggtgtccttctaattttgtcctaaaatttggtggaccgatcacttttgattcaagatcgggagtcagttctttggc 10248572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 225 - 358
Target Start/End: Complemental strand, 16457562 - 16457433
Alignment:
Q  225 gggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttt 324  Q
    |||||||||||| |||||| ||||| | ||| ||| |||||| |||||||||||||||| ||||||  ||||||| ||||||  | | ||||||||||||    
T  16457562 gggcgaggggtgtcctgctaatttgatactatagtttggtgg-ccgatcacttttgattcgagatcgggagtcagttctttg--actcaagttggttttt 16457466  T
Q  325 tggcttttgttttgtgctctttcggtggatcgga 358  Q
     ||| ||||| ||||||||||||||||| |||||    
T  16457465 aggc-tttgtgttgtgctctttcggtggttcgga 16457433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 361
Target Start/End: Original strand, 20138448 - 20138538
Alignment:
Q  268 ccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
    |||||||||||||||||||||||  ||||||| |||||| |  ||| |||||||||| |||||| || ||||||||||||||||||||||||||    
T  20138448 ccgatcacttttgatttgagatcgggagtcagttctttgac--ttatgttggtttttgggcttt-gtgttgtgctctttcggtggatcggaggt 20138538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 15821812 - 15821663
Alignment:
Q  37 gatgttatttaggtgaggaggcaggtgtttgttggggtgatttc-ttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt 135  Q
    |||||| ||||||||||||||| ||||||||||||||||||||| |||||||| |||||| | || || ||||||||  | |||||| |  |||||||||    
T  15821812 gatgttgtttaggtgaggaggcgggtgtttgttggggtgatttctttttggaggcagcctctatttcatgggtccatatttgtcgtcacgtgctcttgtt 15821713  T
Q  136 -tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 184  Q
      |  ||||| |||||| ||||| | ||| |||||||||| |||||||||    
T  15821712 ggcgcttttgagttgtttaggtgctaaggttgtttggagggtgcgtgtcc 15821663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 307
Target Start/End: Complemental strand, 30236245 - 30236148
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 307  Q
    ||||||||| ||||||||  ||||||||||| ||||||||||| | |||||||||||  ||||| ||||||||| ||||||  ||||||| |||||||    
T  30236245 tctctggtggaccgggggtaaggggtgcccttctgatttggttttgaagtctggtgggacgatcgcttttgattcgagatcgggagtcagttctttgg 30236148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 37987284 - 37987114
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 141  Q
    |||| |||| ||||| ||||||||||||||||||||| ||| ||  || | ||||||||| |||| |||| |||||||| ||||||||||||  |  |||    
T  37987284 tttaagtgaagaggcgggtgtttgttggggtgatttcctttagaagcaacttttgttacatgggtacatgttcgtcgtcactagctcttgtttgtgtttt 37987185  T
Q  142 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcg-atgagccttttccttttgat 210  Q
    | |||| ||| ||||||||| || ||| ||||| |||||||| ||||| |  ||||||||||| |||||||    
T  37987184 tcgggtggtttaggtgtttacggagttaggagggtgcgtgtcacgttgtgtttgagccttttctttttgat 37987114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 368
Target Start/End: Complemental strand, 38577808 - 38577751
Alignment:
Q  311 ttaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagagt 368  Q
    |||||||||||||| | |||||||||||||||||||||||||||| ||||| ||||||    
T  38577808 ttaagttggtttttggacttttgttttgtgctctttcggtggatcagaggtcgagagt 38577751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 32066720 - 32066628
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 136  Q
    |||| |||||||||  ||||||||||||||||||||| ||| ||  || ||| ||||||| |||| |||| |||||||| |||||||||||||    
T  32066720 tttaagtgaggaggtgggtgtttgttggggtgatttcctttagaagcaacctctgttacatgggtacatgttcgtcgtcactagctcttgttt 32066628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 10552233 - 10552305
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 283  Q
    ||||||||  ||| ||||| ||||||||||| ||||||||||||| ||||||||||| |||||| |||||||||    
T  10552233 tctctggtagaccaggggcaaggggtgccct-ctgatttggttctgaagtctggtgggccgatcgcttttgatt 10552305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 24995817 - 24995690
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 141  Q
    |||| |||||||||  |||| |||||||||||||||  ||| ||  || ||| |||||||||||||||||||   |||| ||||||||||||  |  |||    
T  24995817 tttaagtgaggaggtgggtgcttgttggggtgattttctttagaagcaacctctgttacacgggtccatggt---cgtcactagctcttgttagtgcttt 24995721  T
Q  142 ttgggttgttaaggtgtttagggtgtttgga 172  Q
    |||||| ||| ||||||||| || |||||||    
T  24995720 ttgggtggtttaggtgtttacggagtttgga 24995690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 30236490 - 30236377
Alignment:
Q  71 gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttg 170  Q
    ||||||||||| |||||| | |||| ||||   ||||| |||  |||| ||||||||||||| ||| | || |||||||| |||||||||||||| |||     
T  30236490 gggtgatttctattggaggccgcctctgtttttcgggttcatactcgttgtcgctagctcttatttgagttgtgggttgtcaaggtgtttagggtatttt 30236391  T
Q  171 gaggatgcgtgtcc 184  Q
    |||| || ||||||    
T  30236390 gagggtgtgtgtcc 30236377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 35062453 - 35062510
Alignment:
Q  242 ctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 299  Q
    ||||||||||||| ||||||||||| ||||||  |||||||| |||||| ||||||||    
T  35062453 ctgatttggttctgaagtctggtgggccgatcgattttgattcgagatcgagagtcag 35062510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 12898378 - 12898302
Alignment:
Q  223 gggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 299  Q
    ||||||||||||||||||  | |||||||  || |||||||||  |||||||||||||||| ||||||  |||||||    
T  12898378 gggggcgaggggtgccctattaatttggtaatatagtctggtgacccgatcacttttgattcgagatccggagtcag 12898302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 18690160 - 18690228
Alignment:
Q  116 cgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 184  Q
    ||||||||||||||||||||| | | |||| |||||||||||||| ||||| || |||  |||||||||    
T  18690160 cgtcgtcgctagctcttgtttgagtattggattgttaaggtgttttgggtgctttgagcgtgcgtgtcc 18690228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 308
Target Start/End: Complemental strand, 17657100 - 17657021
Alignment:
Q  229 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    |||||||||||| || | ||||  ||||||| ||||||  ||||||||||||||| ||||||  ||||||| ||||||||    
T  17657100 gaggggtgcccttctaagttggacctaaagtatggtgggtcgatcacttttgattcgagatcgggagtcagttctttggc 17657021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 15906686 - 15906747
Alignment:
Q  246 tttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 307  Q
    |||||| || ||||||||||| |||||||| ||||||| ||||||  ||||||| |||||||    
T  15906686 tttggtcctgaagtctggtgggccgatcacatttgattcgagatcgggagtcagttctttgg 15906747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 34866464 - 34866375
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttg 133  Q
    |||| |||||||||  |||| ||||| |||||||||| ||| ||  || ||| |||||||||||| |||| ||||||||  |||||||||    
T  34866464 tttaagtgaggaggtgggtgcttgttagggtgatttcctttagaagcaacctctgttacacgggttcatgttcgtcgtcaatagctcttg 34866375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 367
Target Start/End: Complemental strand, 35816238 - 35816205
Alignment:
Q  334 ttttgtgctctttcggtggatcggaggttgagag 367  Q
    ||||||||||||| ||||||||||||||||||||    
T  35816238 ttttgtgctcttttggtggatcggaggttgagag 35816205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 210 - 367
Target Start/End: Original strand, 7874255 - 7874410
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||  ||||||||||||||  |    
T  7874255 tctctagtgtaccgagggcgatgggtgccctgctgatttggttctaaagtctggtgggtcgatcacttttgattcgagatcgggagtcagctctttg--a 7874352  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagag 367  Q
     | |||||||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  7874353 ctcaagttggtttttgggcttttgttttgtgctcattcggtggatcggaggtcgagag 7874410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 210 - 355
Target Start/End: Original strand, 14405163 - 14405305
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||||| |||||||||||||||| ||||||  ||||||||||||||||     
T  14405163 tctctggtgtaccgggggcgaggggtgct-tgatgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctctttggc- 14405260  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatc 355  Q
     | |||||||||||| ||||||||||||||||||||||||||||||    
T  14405261 -tcaagttggtttttgggcttttgttttgtgctctttcggtggatc 14405305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 39 - 210
Target Start/End: Original strand, 17105062 - 17105236
Alignment:
Q  39 tgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt-c 137  Q
    |||| |||||||||||||||  |||||||||||||||||||| ||||||| |||||| || ||||| |||||||| |||||||| ||||||||| ||| |    
T  17105062 tgttgtttaggtgaggaggcgtgtgtttgttggggtgatttcctttggaggcagcctctgctacacaggtccatgttcgtcgtcactagctcttatttgc 17105161  T
Q  138 a-tttttgggttgttaaggtgtttagggtgtttggaggatgcgtgt-ccgttgcgatgagccttttccttttgat 210  Q
    | ||||| || |||||||||||||||||||||| |||| ||| ||| |||||| |||||||||||||||||||||    
T  17105162 acttttttggctgttaaggtgtttagggtgtttagagggtgcttgtcccgttgtgatgagccttttccttttgat 17105236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 214 - 361
Target Start/End: Complemental strand, 39338978 - 39338834
Alignment:
Q  214 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaatta 313  Q
    |||||||||||||||||||||||||||||| ||||||| ||| |||||||||| |||||| ||||||||| ||||||  ||||||| ||||||  | | |    
T  39338978 tggtgtaccgggggcgaggggtgccctgctaatttggtactatagtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttg--actca 39338881  T
Q  314 agttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  39338880 agttggtttttgggc-tttgtgttgtgctctttcggtggatcggaggt 39338834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 224 - 361
Target Start/End: Original strand, 387151 - 387287
Alignment:
Q  224 ggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggtttt 323  Q
    |||||||||||||||||||| ||||||| |||||||||||||| | |||||||||||||||||||||  ||||||  ||||||  | | |||||||||||    
T  387151 ggggcgaggggtgccctgctaatttggtactaaagtctggtgggctgatcacttttgatttgagatcgggagtcaattctttg--actcaagttggtttt 387248  T
Q  324 ttggcttttg-ttttgtgctctttcggtggatcggaggt 361  Q
    |  ||||||| ||||||||||||| ||||||||||||||    
T  387249 tgagcttttgtttttgtgctcttttggtggatcggaggt 387287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 225 - 367
Target Start/End: Complemental strand, 14106626 - 14106484
Alignment:
Q  225 gggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg--caattaagttggttt 322  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||  |||||  ||||||||||||| |  || ||   |||||||    
T  14106626 gggcgaggggtgccctgctgatttggtcctaaagtctggtgggccgatcacttttgattcaagatcgggagtcagctctttagatcagtt---ttggttt 14106530  T
Q  323 tttggcttttg-ttttgtgctctttcggtggatcggaggttgagag 367  Q
    || || ||||| |||||||||||||||||||||| ||||| |||||    
T  14106529 ttgggtttttgtttttgtgctctttcggtggatcagaggtcgagag 14106484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 250 - 367
Target Start/End: Original strand, 5254260 - 5254375
Alignment:
Q  250 gttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcgg 349  Q
    |||||||||||| |||| |||||||||||| ||||||||||  ||||| |||||||||   | |||||||||||  ||||||||||||||||| ||||||    
T  5254260 gttctaaagtctagtgggccgatcacttttaatttgagatcgggagtctgctctttggt--tcaagttggttttcgggcttttgttttgtgctttttcgg 5254357  T
Q  350 tggatcggaggttgagag 367  Q
    |||||||||||| |||||    
T  5254358 tggatcggaggtcgagag 5254375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 212
Target Start/End: Complemental strand, 41087208 - 41087040
Alignment:
Q  49 gtgaggaggcaggtgtttgttgggg-tgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgt-ttcattttt--g 144  Q
    |||||||||| |||||||||||||| ||||||||||||||| |||||| |||||| ||||||| |  |||||||  ||||||||||| | | |||||  |    
T  41087208 gtgaggaggcgggtgtttgttgggggtgatttcttttggagtcagcctctgttactcgggtccttattcgtcgttactagctcttgtatgcgttttttgg 41087109  T
Q  145 ggttgttaaggtgtttagggtgtttggaggatgcgtgt-ccgttgcgatgagccttttccttttgatct 212  Q
    |||||||||||||| |||||||||||||||  ||| || |||||| | | ||||||||||| |||||||    
T  41087108 ggttgttaaggtgtctagggtgtttggaggtagcgggtcccgttgagctaagccttttcctattgatct 41087040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 175
Target Start/End: Complemental strand, 37771085 - 37770933
Alignment:
Q  29 gggtggtagatgttatttaggtgaggaggcaggtgtttgttg-gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctag 127  Q
    ||||||| | |||| ||||||||||||||| ||||||||||| ||||||||||| |||||| | |||| | | || ||||||| || |||||||| ||||    
T  37771085 gggtggttggtgttgtttaggtgaggaggcgggtgtttgttgagggtgatttctgttggaggctgcctctataactcgggtccttgttcgtcgtcactag 37770986  T
Q  128 ctcttgttt-cattttt---gggttgttaaggtg-tttagggtgtttggagga 175  Q
    || |||||| | |||||   |||||||||||||| ||||||||||||||||||    
T  37770985 cttttgtttgcgtttttttggggttgttaaggtgttttagggtgtttggagga 37770933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 174
Target Start/End: Original strand, 1269128 - 1269270
Alignment:
Q  37 gatgttat-ttaggtgaggaggcaggtgtttgtt-ggggtgatttcttttggagacagcctttgttacacgggtccatg-gtcgtcgtcgctagctcttg 133  Q
    |||||||| |||||||||||||| |||||||||| ||||||||||||| |||||   |||| | |||| ||||||| ||  |||||||| ||||||||||    
T  1269128 gatgttatgttaggtgaggaggcgggtgtttgttgggggtgatttcttctggaggttgcctctattactcgggtccttgtttcgtcgtcactagctcttg 1269227  T
Q  134 ttt-cattttt-gggttgttaaggtgtttagggtgtttggagg 174  Q
    ||| | ||||| |||||||||| ||||||| ||||||||||||    
T  1269228 tttgcgtttttggggttgttaaagtgtttatggtgtttggagg 1269270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 290
Target Start/End: Original strand, 10524061 - 10524141
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 290  Q
    |||||||| ||| ||||||||| ||||||||||  ||||||| ||| |||||||||| |||||||||||||||| ||||||    
T  10524061 tctctggtctactgggggcgagaggtgccctgccaatttggtgctatagtctggtgggccgatcacttttgattcgagatc 10524141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 229 - 308
Target Start/End: Original strand, 1269466 - 1269545
Alignment:
Q  229 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    |||||||||||| ||||||| || |||||||||||||| |||||||||||||||| ||||||   |||||| ||||||||    
T  1269466 gaggggtgcccttctgatttagtcctaaagtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggc 1269545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 210
Target Start/End: Complemental strand, 39339290 - 39339121
Alignment:
Q  45 ttaggtgaggaggcaggtgtttgttg-gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 141  Q
    ||||||||||| | ||||| |||||| |||||||||  ||| ||  || ||  ||||||||||||||||| |||||||  ||||||||||||  |  |||    
T  39339290 ttaggtgaggatgtaggtggttgttgtgggtgattttctttagaagcaacccctgttacacgggtccatgttcgtcgttactagctcttgtttgtgcttt 39339191  T
Q  142 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 210  Q
    |||||| ||| ||||||||| |  ||||||||| || ||||| ||||| | |||||||||||||||||||    
T  39339190 ttgggtggtttaggtgtttacgaagtttggagggtgtgtgtcacgttgtgttgagccttttccttttgat 39339121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 283
Target Start/End: Complemental strand, 37770758 - 37770685
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 283  Q
    |||||||||||||| ||| |||||||||||  |||||||||| |||| || |||||| ||||||||||||||||    
T  37770758 tctctggtgtaccgagggtgaggggtgcccatctgatttggtcctaaggtttggtgggccgatcacttttgatt 37770685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 304
Target Start/End: Original strand, 17105379 - 17105470
Alignment:
Q  214 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcac-ttttgatttgagatcaagagtcagctctt 304  Q
    ||||||||| |||| |||||||||||| |||||||||| || ||||||| ||| |||||||| |||||||| |||||| ||| |||| ||||    
T  17105379 tggtgtaccaggggtgaggggtgccctactgatttggtactgaagtctgatgggccgatcactttttgattcgagatcgagaatcagatctt 17105470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 210
Target Start/End: Original strand, 7695719 - 7695893
Alignment:
Q  39 tgttatttaggtgaggaggcaggtgtttgttggggt-gatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttc 137  Q
    |||| ||||||||| |||||  ||||||||||| || ||||| |||| ||| | |||| |||||| ||||||| || |||  ||| ||||||||| || |    
T  7695719 tgttgtttaggtgaagaggcgagtgtttgttggagttgatttattttagaggctgcctctgttactcgggtccttgttcgctgtccctagctctttttgc 7695818  T
Q  138 atttt-tgggttgttaaggtgtttagggtgtttggaggatgcg-tgtccgttgcgatgagccttttccttttgat 210  Q
     |||| ||||||||||||||||||||| ||||| || || |||   ||| ||| | |||||||||||||||||||    
T  7695819 gttttttgggttgttaaggtgtttaggctgtttagaagaagcgaattcctttgtgttgagccttttccttttgat 7695893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 22885481 - 22885412
Alignment:
Q  115 tcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 184  Q
    |||||||||||| ||||||||| | ||| |||||| ||||||||||| |||| ||||||| |||||||||    
T  22885481 tcgtcgtcgctacctcttgtttgagtttcgggttgctaaggtgtttaaggtgattggagggtgcgtgtcc 22885412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 16959989 - 16960044
Alignment:
Q  253 ctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    |||||||||||||| |||||| ||||||||| |||||| |||||||| ||||||||    
T  16959989 ctaaagtctggtgggccgatcgcttttgattcgagatcgagagtcagttctttggc 16960044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 367
Target Start/End: Complemental strand, 10173695 - 10173541
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||||||||||| | || || |||||| ||  || |||||| ||||||||| |||| |||||||||||||||| ||||||   ||| || | ||||||     
T  10173695 tctctggtgtaccagaggtgaagggtgctcttttgttttggtcctaaagtctagtgggccgatcacttttgattcgagatcggaagtaagttatttggc- 10173597  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagag 367  Q
     | ||||| | |||| |||||||| || ||| |||||||||| ||||||||| |||||    
T  10173596 -tcaagtttggttttgggcttttg-ttggtgttctttcggtgaatcggaggtcgagag 10173541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 9560886 - 9560825
Alignment:
Q  229 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 290  Q
    |||||||||| || |||||||  || ||||| ||||||||||||||||||||||| ||||||    
T  9560886 gaggggtgccttgatgatttgtgtcgaaagtttggtggaccgatcacttttgattcgagatc 9560825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 22885229 - 22885153
Alignment:
Q  230 aggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 307  Q
    |||||||||| |||| |||| | || ||||||||||| |||||||||||||||| ||||||  ||||||| |||||||    
T  22885229 aggggtgccc-gctggtttgatcctgaagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgg 22885153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 291
Target Start/End: Complemental strand, 41086904 - 41086824
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatca 291  Q
    ||||||||||||| |||| ||||| |||||| ||||||||||  || ||||||||||  | ||||||||||||| |||||||    
T  41086904 tctctggtgtaccaggggtgaggg-tgcccttctgatttggtcatatagtctggtgggtcaatcacttttgattcgagatca 41086824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 15710437 - 15710505
Alignment:
Q  116 cgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 184  Q
    ||||||||||||||||||||| | | |||| |||||||||||||| |||||  | ||| ||||||||||    
T  15710437 cgtcgtcgctagctcttgtttgagtattggattgttaaggtgttttgggtgccttgagcatgcgtgtcc 15710505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 15722900 - 15722968
Alignment:
Q  116 cgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 184  Q
    ||||||||||||||||||||| | | |||| |||||||||||||| ||||| || |||  |||||||||    
T  15722900 cgtcgtcgctagctcttgtttgagtattggattgttaaggtgttttgggtgctttgagcgtgcgtgtcc 15722968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 291
Target Start/End: Original strand, 8520385 - 8520447
Alignment:
Q  229 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatca 291  Q
    |||||||||| |  ||||||| ||||| |||||| |||||| ||||||||||||| |||||||    
T  8520385 gaggggtgccttagtgatttgtttctagagtctgatggaccaatcacttttgattcgagatca 8520447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 25505258 - 25505196
Alignment:
Q  104 cgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtg 166  Q
    |||||||||  |||| | ||||| ||||||||| | ||||| |||||||||||||||||||||    
T  25505258 cgggtccattttcgttgacgctacctcttgtttgagttttgagttgttaaggtgtttagggtg 25505196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 299
Target Start/End: Original strand, 27739939 - 27740028
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 299  Q
    ||||||||| || |||||  ||||||||||  |||  ||||| || ||||||||||| |||||| |||||||||  ||||| ||||||||    
T  27739939 tctctggtggactgggggttaggggtgcccatctggattggtcctgaagtctggtgggccgatcgcttttgattcaagatcgagagtcag 27740028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 10523819 - 10523922
Alignment:
Q  110 catggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttt 206  Q
    |||| |||||||| ||||||||||||  |  |||| |||| ||| ||||||||| || ||||| ||| |||||||| ||||| | ||||||||||| |||    
T  10523819 catgttcgtcgtcactagctcttgtttgtgcttttcgggtggtttaggtgtttacggagtttgtagggtgcgtgtcacgttgtgttgagccttttctttt 10523918  T
Q  207 tgat 210  Q
    ||||    
T  10523919 tgat 10523922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 16952725 - 16952681
Alignment:
Q  115 tcgtcgtcgctagctcttgttt-catttttgggttgttaaggtgt 158  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||    
T  16952725 tcgtcgtcactagctcttatttgcatttttgggttgttaaggtgt 16952681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 17023390 - 17023346
Alignment:
Q  115 tcgtcgtcgctagctcttgttt-catttttgggttgttaaggtgt 158  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||    
T  17023390 tcgtcgtcactagctcttatttgcatttttgggttgttaaggtgt 17023346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 17060696 - 17060652
Alignment:
Q  115 tcgtcgtcgctagctcttgttt-catttttgggttgttaaggtgt 158  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||    
T  17060696 tcgtcgtcactagctcttatttgcatttttgggttgttaaggtgt 17060652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 8e-43; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 29087445 - 29087594
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||| ||||||||||||||||||||| |||||  ||||||||||||||||||||||| |||| ||||||||| ||||||| ||||||| ||||||  |    
T  29087445 tctctgttgtaccgggggcgaggggtgctctgctattttggttctaaagtctggtggactgatcccttttgattcgagatcaggagtcagttctttg--a 29087542  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
    || || ||||||| | ||||||||||||||||||||||||||||||||||||    
T  29087543 atcaaattggtttctgggcttttgttttgtgctctttcggtggatcggaggt 29087594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 34378062 - 34378210
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||||||||||||||||| ||| |||||||||| ||||||| |||||||||||||| |||||||||||||||| ||||||  ||||||| |||||| ||    
T  34378062 tctctggtgtaccgggggcaaggagtgccctgctaatttggtactaaagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgaca 34378161  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
       |||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  34378162 --caagttggtttttgggc-tttgttttgtgctctttcggtggaccggaggt 34378210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 210 - 363
Target Start/End: Original strand, 698325 - 698475
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||| ||||||  |||||| |||||||  |    
T  698325 tctctggtgtaccgggggcgaggggtgccctgctaatttggtgctatagtctggtggaccgatctcttttgattcgagatcgggagtcaactctttg--a 698422  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttg 363  Q
     | |||||||||||| ||| ||||| |||| ||||||| |||| || |||||||    
T  698423 ctcaagttggtttttgggc-tttgtgttgtactctttctgtggttcagaggttg 698475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 210 - 309
Target Start/End: Complemental strand, 7392148 - 7392049
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||| ||||||| ||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||||    
T  7392148 tctctgatgtaccgagggtgaggggtgcccttctgatttggtcctaaagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttggca 7392049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 29087204 - 29087346
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 141  Q
    |||||| ||||||||||||||| |||||||||||||  | ||||  || ||| ||||||| ||||||||| |||||||| ||||||||||||  |  |||    
T  29087204 tttaggcgaggaggcaggtgttggttggggtgattttctatggaagcaacctctgttacatgggtccatgttcgtcgtcactagctcttgtttgtgtttt 29087303  T
Q  142 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 184  Q
    |||||| ||| ||||||||| || |||||||||||||||||||    
T  29087304 ttgggtggtttaggtgtttacggagtttggaggatgcgtgtcc 29087346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 175
Target Start/End: Complemental strand, 26046395 - 26046256
Alignment:
Q  39 tgttatttaggtgaggaggcaggtgtttgttggggt-gatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt- 136  Q
    |||| |||||||||| |||| ||||||||||||||| |||||||||||||||| |||| |||||| ||||||| || ||||| || |||||||||||||     
T  26046395 tgttgtttaggtgagtaggcgggtgtttgttggggttgatttcttttggagactgcctctgttactcgggtccttgttcgtcttcactagctcttgtttg 26046296  T
Q  137 catttttgggttg-ttaaggtgtttagggtgtttggagga 175  Q
      |||||||| || || ||||||||||||||||| |||||    
T  26046295 tgtttttggggtgttttaggtgtttagggtgtttagagga 26046256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 39 - 184
Target Start/End: Complemental strand, 7195672 - 7195523
Alignment:
Q  39 tgttatttaggtgaggaggcaggtgtttgttgg-ggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt- 136  Q
    |||| |||| |||||||||||||||||| |||  |||||||||||||  |||| || | |||||| ||||||| || | || ||| |||||||||||||     
T  7195672 tgttgtttacgtgaggaggcaggtgtttattgtaggtgatttcttttatagactgcttatgttactcgggtccttgtttgttgtcactagctcttgttta 7195573  T
Q  137 catt--tttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 184  Q
    ||||  |||||||| |||||||||||||||||||||||||| ||||||||    
T  7195572 cattgttttgggttattaaggtgtttagggtgtttggaggaagcgtgtcc 7195523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 24072659 - 24072546
Alignment:
Q  71 gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttg 170  Q
    |||||||||||||| ||| | |||| |||||  |||||||||  |||| ||||||||||||||||| | ||||||||||||||||||||||||||| ||     
T  24072659 gggtgatttcttttagaggccgcctctgttattcgggtccatattcgttgtcgctagctcttgtttaagttttgggttgttaaggtgtttagggtgcttt 24072560  T
Q  171 gaggatgcgtgtcc 184  Q
     ||| |||||||||    
T  24072559 aagggtgcgtgtcc 24072546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 18593207 - 18593355
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||| |||||||||||||||||| ||||||||| ||||||| ||| ||| | |||| | |||||||||||||| ||||||  |||| || ||||||  |    
T  18593207 tctctcgtgtaccgggggcgagggatgccctgctaatttggtgctatagtttagtgggcagatcacttttgattcgagatcgggagttagttctttg--a 18593304  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | |||||||||||| ||| || || ||||||||||||||||| ||||||||    
T  18593305 ctcaagttggtttttgggc-ttagtgttgtgctctttcggtggttcggaggt 18593355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 307
Target Start/End: Complemental strand, 33258999 - 33258902
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 307  Q
    ||||||||||||||  || |||||||| ||| ||| |||||| |||||||||||||| |||||||||||||||| ||||||| |||| || |||||||    
T  33258999 tctctggtgtaccgaaggtgaggggtgtccttctgttttggtgctaaagtctggtgggccgatcacttttgattcgagatcaggagttagttctttgg 33258902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 290
Target Start/End: Complemental strand, 13954350 - 13954271
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 290  Q
    ||||||||||||||  || |||||||||| | |||||||||| |||||||||||||| |||||||||||||||| ||||||    
T  13954350 tctctggtgtaccgaaggtgaggggtgcctt-ctgatttggtcctaaagtctggtgggccgatcacttttgattcgagatc 13954271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 308
Target Start/End: Complemental strand, 7195355 - 7195258
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    ||||||||||||| |||  |||||||||||| |||||||||   ||||||||||||  |||||||||||||||| ||||||  ||||||| ||||||||    
T  7195355 tctctggtgtaccagggt-gaggggtgcccttctgatttggccataaagtctggtgagccgatcacttttgattcgagatcgggagtcagttctttggc 7195258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 174
Target Start/End: Complemental strand, 13954663 - 13954525
Alignment:
Q  39 tgttatttaggtgaggaggcaggtgtttgttgggg-tgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt- 136  Q
    |||| ||||||||||||| | |||||||||||||| ||||||| | |||||   || |||||||  | ||||  || |||||||| |||||||||||||     
T  13954663 tgttgtttaggtgaggagacgggtgtttgttgggggtgatttcctctggaggttgcgtttgttattcaggtctttgttcgtcgtcactagctcttgtttg 13954564  T
Q  137 catttttgg-gttgttaaggtgtttagggtgtttggagg 174  Q
    | ||| ||| |||||||||||||||||||||||||||||    
T  13954563 cgtttctggagttgttaaggtgtttagggtgtttggagg 13954525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 307
Target Start/End: Complemental strand, 14302547 - 14302450
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 307  Q
    ||||||||||| || ||| ||||| |||||| ||| |||||| |||||||||||||||| ||||||||||| || |||||   ||||||| |||||||    
T  14302547 tctctggtgtatcgagggtgagggatgcccttctgttttggtcctaaagtctggtggactgatcacttttggttcgagattgggagtcagttctttgg 14302450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 308
Target Start/End: Original strand, 8297432 - 8297530
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    ||||| |||||||| ||| |||||||||||| |||||||||||||||||  |||||| |  || | |||||||| ||||||  ||||||| ||||||||    
T  8297432 tctctagtgtaccgagggtgaggggtgcccttctgatttggttctaaagcatggtgggctaataatttttgattcgagatcgggagtcagttctttggc 8297530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 307
Target Start/End: Complemental strand, 24072383 - 24072286
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 307  Q
    ||||||||| |||| |||   |||||||||| |||||||||| |||||||||||| | | |||| ||||||||||||||||   |||||| |||||||    
T  24072383 tctctggtggaccgagggtttggggtgcccttctgatttggtcctaaagtctggttggctgatcgcttttgatttgagatcggaagtcagttctttgg 24072286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 299
Target Start/End: Original strand, 31721641 - 31721730
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 299  Q
    ||||||||| ||||||||  ||||||||||| ||||| ||||||| ||||||  ||| |||||| ||||||||| ||||||  |||||||    
T  31721641 tctctggtggaccgggggtaaggggtgcccttctgatgtggttctgaagtctaatgggccgatcgcttttgattcgagatcgggagtcag 31721730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 7162333 - 7162285
Alignment:
Q  313 aagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
    |||||||||||| || |||||||||||||||||||| ||||||||||||    
T  7162333 aagttggtttttgggtttttgttttgtgctctttcgatggatcggaggt 7162285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 308
Target Start/End: Complemental strand, 22675402 - 22675343
Alignment:
Q  249 ggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    |||||||||||||||||||||||||  |||||||| ||||||  ||||||| ||||||||    
T  22675402 ggttctaaagtctggtggaccgatcgattttgattcgagatcgggagtcagttctttggc 22675343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 305
Target Start/End: Original strand, 25991973 - 25992066
Alignment:
Q  212 tctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctcttt 305  Q
    ||||||||||||  |  |||| ||||||| ||  |||||| |||||||||||||| || ||| ||||||||| |||||| |||||||| |||||    
T  25991973 tctggtgtaccgaagatgaggagtgcccttctattttggtgctaaagtctggtgggccaatcgcttttgattcgagatcgagagtcagttcttt 25992066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 26046045 - 26046001
Alignment:
Q  246 tttggttctaaagtctggtggaccgatcacttttgatttgagatc 290  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||||    
T  26046045 tttggtcctaaagtctggtgaaccgatcacttttgattcgagatc 26046001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 8730649 - 8730711
Alignment:
Q  104 cgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtg 166  Q
    |||||||||  |||| | ||||| ||||||||| | ||||| |||||||||||||||||||||    
T  8730649 cgggtccattttcgttgacgctacctcttgtttgagttttgagttgttaaggtgtttagggtg 8730711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 28765700 - 28765630
Alignment:
Q  229 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 299  Q
    ||||||||||||  ||||||  ||||| | |||||||||  |||||||||||||| |||||| ||||||||    
T  28765700 gaggggtgccctaatgatttttttctagattctggtggattgatcacttttgattcgagatcgagagtcag 28765630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 289
Target Start/End: Original strand, 25341709 - 25341741
Alignment:
Q  257 agtctggtggaccgatcacttttgatttgagat 289  Q
    |||||||||| ||||||||||||||||||||||    
T  25341709 agtctggtgggccgatcacttttgatttgagat 25341741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 27712819 - 27712871
Alignment:
Q  115 tcgtcgtcgctagctcttgtttca-tttttgggttgttaaggtgtttagggtg 166  Q
    |||| ||||||| ||||||||||| ||||||||| | ||||||||||||||||    
T  27712819 tcgttgtcgctacctcttgtttcagtttttgggtggctaaggtgtttagggtg 27712871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 8e-43; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 8254991 - 8255139
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||  |||||||  |||||| ||||||  |    
T  8254991 tctctggtgtaccgggggcgaggggtgccctgctaatttggtactaaagtctggtgggccgatcacttttgatccgagatcagaagtcagttctttg--a 8255088  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | |||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  8255089 ctcaagttggtttttgggc-tttgttttgtgctctttcggtggatcggaggt 8255139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 8268409 - 8268557
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||  |||||||  |||||| ||||||  |    
T  8268409 tctctggtgtaccgggggcgaggggtgccctgctaatttggtactaaagtctggtgggccgatcacttttgatccgagatcagaagtcagttctttg--a 8268506  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | |||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  8268507 ctcaagttggtttttgggc-tttgttttgtgctctttcggtggatcggaggt 8268557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 217 - 367
Target Start/End: Complemental strand, 31050772 - 31050623
Alignment:
Q  217 tgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagt 316  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||   ||| || |||||||   || |||    
T  31050772 tgtaccgggggcgaggggtgccctactgatttggttctaaagtctggtgggccgatcacttttgattcgagatcggaagttaggtctttgg--tttgagt 31050675  T
Q  317 tggttttttggcttttg-ttttgtgctctttcggtggatcggaggttgagag 367  Q
    |||||||| |||||||| |||||||||||||| ||||||||||||| |||||    
T  31050674 tggtttttgggcttttgtttttgtgctctttcagtggatcggaggtcgagag 31050623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 2825747 - 2825896
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||| ||||||| |||||||| ||||||  || ||| |||||||||     
T  2825747 tctctggtgtaccgagggcgaggggtgctctgctgatttggttctaaagtccggtgggccgatcatttttgattcgagatcgggaatcacctctttggc- 2825845  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | ||  |||||||| ||||||| |||||| |||||||||||||||||||||    
T  2825846 -tcaatgtggtttttgggcttttattttgtactctttcggtggatcggaggt 2825896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 39 - 210
Target Start/End: Original strand, 19672753 - 19672927
Alignment:
Q  39 tgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt-tc 137  Q
    |||| ||||||||||||||| |||||||||| |||||||||| ||||||| || |||  ||||||||| |||||| |||||| | ||||||||||||       
T  19672753 tgttgtttaggtgaggaggcgggtgtttgtttgggtgatttcctttggaggcatcctccgttacacggatccatgttcgtcgccactagctcttgttggt 19672852  T
Q  138 atttttgggttgttaaggtgtttaggg-tgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 210  Q
     ||||||||||||||||||||||||||   ||||| || |||||||| ||||| |||||||||||||||||||||    
T  19672853 gtttttgggttgttaaggtgtttagggaattttggggggtgcgtgtctcgttgagatgagccttttccttttgat 19672927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 8254683 - 8254852
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 141  Q
    |||| |||||||||| |||| ||||||||| |||||  ||||||  || ||||||||||||||||||||| |||||||| ||||||||||||  | |||     
T  8254683 tttaagtgaggaggcgggtgcttgttggggagattttctttggaagcaacctttgttacacgggtccatgttcgtcgtcactagctcttgtttgtgattg 8254782  T
Q  142 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 210  Q
    |||||| ||| |||||||||  | ||||| ||| |||||||| | ||| | |||||||||||||||||||    
T  8254783 ttgggtggtttaggtgtttaccgagtttgaagggtgcgtgtcgctttgtgttgagccttttccttttgat 8254852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 44 - 210
Target Start/End: Original strand, 8268101 - 8268270
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 141  Q
    |||| |||||||||| |||| ||||||||| |||||  ||||||  || ||||||||||||||||||||| |||||||| ||||||||||||  | |||     
T  8268101 tttaagtgaggaggcgggtgcttgttggggagattttctttggaagcaacctttgttacacgggtccatgttcgtcgtcactagctcttgtttgtgattg 8268200  T
Q  142 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 210  Q
    |||||| ||| |||||||||  | ||||| ||| |||||||| | ||| | |||||||||||||||||||    
T  8268201 ttgggtggtttaggtgtttaccgagtttgaagggtgcgtgtcgctttgtgttgagccttttccttttgat 8268270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 210 - 308
Target Start/End: Complemental strand, 53823538 - 53823440
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    ||||||||||||||| || |||||||||||| ||||||||||  |||||||||||||||| ||||||||||||| ||||||  ||||||| ||||||||    
T  53823538 tctctggtgtaccggaggtgaggggtgcccttctgatttggtcataaagtctggtggaccaatcacttttgattcgagatcgggagtcagttctttggc 53823440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 30964405 - 30964553
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||| ||||||||||||||||||| ||||||| ||| | |||| ||| |||||||||||||||| | ||||  ||||| | ||||||  |    
T  30964405 tctctggtgtaccgagggcgaggggtgccctgctaatttggtactataatctgatgggccgatcacttttgattcgtgatcgggagtccgttctttg--a 30964502  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | ||||||| ||||||| |||||| ||||||||||| ||||| ||||||||    
T  30964503 ctcaagttgg-tttttgggttttgtgttgtgctcttttggtggttcggaggt 30964553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 210 - 352
Target Start/End: Original strand, 4305689 - 4305828
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||||||||||||||||| || ||||||||||| ||||||| ||| ||||||||||  ||||||||||||||| ||||||  |||| || |||||| |     
T  4305689 tctctggtgtaccgggggcaagcggtgccctgctaatttggtactatagtctggtggggcgatcacttttgattcgagatcgggagttagttctttgtc- 4305787  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtgg 352  Q
     | |||||||||||| ||| ||||| ||||||||||| |||||    
T  4305788 -tcaagttggtttttaggc-tttgtgttgtgctcttttggtgg 4305828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 60 - 210
Target Start/End: Complemental strand, 31051070 - 31050917
Alignment:
Q  60 ggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttg-ttaaggt 156  Q
    |||||||||| ||||| |||| ||||||| |||||| || |||||||||||| | |||||||| ||||||||||||  || ||||||||||| |||||||    
T  31051070 ggtgtttgtttgggtgttttcctttggaggcagcctctggtacacgggtccacgttcgtcgtcactagctcttgttggtc-tttttgggttgtttaaggt 31050972  T
Q  157 gtttagggtg-tttggaggatgcgtgtccgttgcgatgagccttttccttttgat 210  Q
    |||||||| | |||||||| |||||  |||||| |||||| || |||||||||||    
T  31050971 gtttagggagttttggagggtgcgttcccgttgtgatgagtctcttccttttgat 31050917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 220 - 308
Target Start/End: Complemental strand, 19815331 - 19815243
Alignment:
Q  220 accgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    |||||||| |||||||||||| ||| |||||| |||||||||||||||||||| |||||| ||| ||||||| ||||||| ||||||||    
T  19815331 accgggggtgaggggtgcccttctgttttggtcctaaagtctggtggaccgattactttttattcgagatcaggagtcagttctttggc 19815243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 25753136 - 25753283
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    ||||||||||||||| || |||| ||||||  || ||||||| ||||||||||||||  ||||||||||||||| ||||||  ||||||| ||||||||     
T  25753136 tctctggtgtaccggaggtgaggagtgcccgtcttatttggtcctaaagtctggtggggcgatcacttttgattcgagatcgggagtcagttctttggc- 25753234  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | ||||| | |||| ||||||| | ||||  ||||||||||||||||||||    
T  25753235 -tcaagtttgattttgggctttt-tattgt-ttctttcggtggatcggaggt 25753283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 308
Target Start/End: Original strand, 38929791 - 38929889
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    ||||||||| ||||||||  ||||||||||  ||| || ||| || ||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||    
T  38929791 tctctggtggaccgggggtaaggggtgcccgtctggttgggtcctgaagtctgctgggccgatcacttttgattcgagatcaagagtcagttctttggc 38929889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 305
Target Start/End: Original strand, 49747524 - 49747586
Alignment:
Q  243 tgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctcttt 305  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||| |||||||| |||||    
T  49747524 tgatttggttctaaagtctggtgagccgatcacttttgatttgagatcgagagtcagttcttt 49747586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 51 - 210
Target Start/End: Original strand, 30964104 - 30964266
Alignment:
Q  51 gaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggtt 148  Q
    |||||||  |||| ||||||||||||| || |||  |  || ||| ||||||||||||||||| |||||||| |||||| |||||  |  |||||||||     
T  30964104 gaggaggtgggtgcttgttggggtgatatcctttaaaagcaacctctgttacacgggtccatgttcgtcgtcactagctattgtttgtgctttttgggtg 30964203  T
Q  149 gttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 210  Q
    ||| ||||||||  || ||||||||| |||||||| ||||| | ||| |||||||||||||||    
T  30964204 gtttaggtgtttgcggagtttggagggtgcgtgtcacgttgtgttgaaccttttccttttgat 30964266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 359
Target Start/End: Complemental strand, 35341371 - 35341308
Alignment:
Q  294 agtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtggatcggag 359  Q
    |||||||||||||||  | |||||||||||| | ||||||||||||||||||||||||||||||||    
T  35341371 agtcagctctttggc--tcaagttggtttttggccttttgttttgtgctctttcggtggatcggag 35341308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 307
Target Start/End: Complemental strand, 2061855 - 2061758
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 307  Q
    ||||||||||| ||  || ||||||||||||  ||||||| | |||||||||||||| | |||||||||||||| |||||  |||||||| |||||||    
T  2061855 tctctggtgtatcgaaggtgaggggtgccctcttgatttgatcctaaagtctggtgggctgatcacttttgattcgagattgagagtcagttctttgg 2061758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 206
Target Start/End: Original strand, 4305381 - 4305546
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 141  Q
    |||| |||||||||  |||| |||||||||||||||| ||| ||  ||   | ||||||| || |||||| |||||||| ||||||||||||  |  |||    
T  4305381 tttaagtgaggaggtgggtgcttgttggggtgatttcctttagaagcaatatctgttacatggatccatgttcgtcgtcactagctcttgtttgtgcttt 4305480  T
Q  142 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttt 206  Q
    ||||||||||  |||||||  |||||||||| | | |||||| ||||| | |||||||||||||||    
T  4305481 ttgggttgtttgggtgttttcggtgtttggaaggttcgtgtcacgttgtgttgagccttttccttt 4305546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 308
Target Start/End: Original strand, 19673077 - 19673162
Alignment:
Q  222 cgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    |||||| |||||||||||| ||| |||||| |||||||||||||||||  || ||||| ||| ||||||| ||||||| ||||||||    
T  19673077 cgggggtgaggggtgcccttctgttttggtcctaaagtctggtggaccattccctttt-attcgagatcaggagtcagttctttggc 19673162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 308
Target Start/End: Complemental strand, 22811276 - 22811179
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    ||||||||||| |||||  |||| ||||||| ||||||||||  ||||||||||||| ||||||| |||| ||| ||||||  ||||||| ||||||||    
T  22811276 tctctggtgtatcggggt-gaggagtgcccttctgatttggtcttaaagtctggtgggccgatcattttttattcgagatcgggagtcagttctttggc 22811179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 35800476 - 35800533
Alignment:
Q  233 ggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 290  Q
    |||||||| ||||||||||||| |||||||||| ||||||| ||||||||| ||||||    
T  35800476 ggtgcccttctgatttggttctgaagtctggtgaaccgatcgcttttgattcgagatc 35800533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 290
Target Start/End: Complemental strand, 21387321 - 21387241
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 290  Q
    ||||||||| | |||||| ||||  | |||| |||||||||| ||  ||||||||||||||||||||||||||| ||||||    
T  21387321 tctctggtggatcgggggtgaggaatacccttctgatttggtgctggagtctggtggaccgatcacttttgattcgagatc 21387241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 22811504 - 22811416
Alignment:
Q  125 tagctcttgttt-catttttg-ggttgttaaggtgtttagggtgtttggaggatgcgtgt-ccgttgcgatgagccttttccttttgat 210  Q
    |||||||||||| | |||||| |||||||||||||||||||| |||||||||| ||| || ||||||   | |||||||||||||||||    
T  22811504 tagctcttgtttgcttttttgtggttgttaaggtgtttagggagtttggaggaagcgggtcccgttgatctaagccttttccttttgat 22811416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 288
Target Start/End: Complemental strand, 19311451 - 19311381
Alignment:
Q  217 tgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgaga 288  Q
    |||| |||||| |||||||| ||| ||||||||||| ||| |||||||||  ||||||||||||||| ||||    
T  19311451 tgtaacgggggtgaggggtgtccttctgatttggttttaa-gtctggtgggtcgatcacttttgattcgaga 19311381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 36962713 - 36962643
Alignment:
Q  229 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 299  Q
    ||||||| || | ||||||||||| |  |||||||||| ||||| |||||||||| ||||||| |||||||    
T  36962713 gaggggtaccttactgatttggttttggagtctggtgggccgattacttttgattcgagatcaggagtcag 36962643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 39041344 - 39041302
Alignment:
Q  257 agtctggtggaccgatcacttttgatttgagatcaagagtcag 299  Q
    |||||||||| |||||||||||||||| ||||||| |||||||    
T  39041344 agtctggtgggccgatcacttttgattcgagatcaggagtcag 39041302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 39421111 - 39421050
Alignment:
Q  229 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 290  Q
    |||||||||||| ||||| ||||  || || ||||||| |||||||||||||||| ||||||    
T  39421111 gaggggtgcccttctgatatggtcttatagcctggtgggccgatcacttttgattcgagatc 39421050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 16510718 - 16510549
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttc--attt 141  Q
    |||| |||||||||| ||||||||||||||||||||| |||||||  | ||| | ||||||||||||||| |||||||| ||||||||||||||   |||    
T  16510718 tttaagtgaggaggcgggtgtttgttggggtgatttcctttggaggaaacctctcttacacgggtccatgttcgtcgtcactagctcttgtttctgcttt 16510619  T
Q  142 ttgggttgttaaggtgtttagggtgtttggaggatgcgtg-tccgttgcgatgagccttttccttttgat 210  Q
    | |||| ||| ||||||||| || ||||||||| |||||| ||||||| | |||||||||||||||||||    
T  16510618 tcgggtggtttaggtgtttatggagtttggagggtgcgtgttccgttgtgttgagccttttccttttgat 16510549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 49 - 184
Target Start/End: Complemental strand, 20702225 - 20702086
Alignment:
Q  49 gtgaggaggcaggtgtttgttgggg-tgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgt-ttcattttt--g 144  Q
    |||||||||| |||||||||||||| |||||||||||||||  |||||||||||| ||||||| || |||||||| |||| |||||| | |||||||  |    
T  20702225 gtgaggaggcgggtgtttgttgggggtgatttcttttggaggtagcctttgttactcgggtccttgttcgtcgtcactagttcttgtatgcattttttgg 20702126  T
Q  145 ggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 184  Q
    | ||||||||||||||||||||||||||||| ||| ||||    
T  20702125 gattgttaaggtgtttagggtgtttggaggaagcgggtcc 20702086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 210 - 305
Target Start/End: Complemental strand, 16510418 - 16510323
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctcttt 305  Q
    |||||||||||||| |||| |||||||||||||| ||||||||||||||||| |||| |||||||||||||||| |||||  |||||||| |||||    
T  16510418 tctctggtgtaccgagggcaaggggtgccctgctaatttggttctaaagtctagtgggccgatcacttttgattcgagattgagagtcagttcttt 16510323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 210 - 361
Target Start/End: Original strand, 3117457 - 3117605
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||| ||||||||||||||||||||||| ||||| |  || ||| |||||| ||||||||||||||||  |||||  ||||||| ||||||  |    
T  3117457 tctctggtgttccgggggcgaggggtgccctgctaatttgttgatatagtatggtgggccgatcacttttgattcaagatcgggagtcagttctttg--a 3117554  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     | |||||||||||| ||| ||||| |||||||||||  |||| ||||||||    
T  3117555 ctcaagttggtttttgggc-tttgtgttgtgctctttatgtggttcggaggt 3117605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 45 - 184
Target Start/End: Original strand, 12793776 - 12793916
Alignment:
Q  45 ttaggtgaggaggcaggtgtttgttg-gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcattttt 143  Q
    ||||||||||||   |||| |||||| ||||||||||| ||||||   ||||||||||  |||||||||  |||| ||| ||||||||||||| | || |    
T  12793776 ttaggtgaggagaggggtgattgttgtgggtgatttctattggaggtcgcctttgttattcgggtccatactcgttgtccctagctcttgtttaagttgt 12793875  T
Q  144 gggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 184  Q
    ||||||||||||||||| |||||||| |||| || ||||||    
T  12793876 gggttgttaaggtgttttgggtgttttgagggtgtgtgtcc 12793916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 367
Target Start/End: Complemental strand, 20701920 - 20701767
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||||||| |||||||||||| ||||||||||  |  || ||||||  |||||||||||||||| ||||||  |||| || ||||||||     
T  20701920 tctctggtgtaccgggggtgaggggtgcccttctgatttggtcatttagactggtgtgccgatcacttttgattcgagatcgggagttagttctttggc- 20701822  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagag 367  Q
     ||||||| | |||| ||||||  || ||   |||||||||||||||||||| |||||    
T  20701821 -ttaagtttggttttgggcttt--ttatggtttctttcggtggatcggaggtcgagag 20701767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 283
Target Start/End: Complemental strand, 3880700 - 3880627
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 283  Q
    |||||||| ||||| ||| ||| |||||||| |||||||||| ||||||| |||||| ||||||||||||||||    
T  3880700 tctctggtttaccgagggtgagaggtgcccttctgatttggtcctaaagtttggtgggccgatcacttttgatt 3880627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 15132640 - 15132585
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtg 265  Q
    |||||| ||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  15132640 tctctgatgtactgggggcgaggggtgccctgttgattttgttctaaagtctggtg 15132585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 304
Target Start/End: Complemental strand, 32935444 - 32935362
Alignment:
Q  222 cgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctt 304  Q
    |||||| ||||||| |||| |||||||||| || ||||||||||| |||||| ||||||||| ||||||  ||||||| ||||    
T  32935444 cgggggtgaggggttcccttctgatttggtcctgaagtctggtgggccgatcgcttttgattcgagatcgggagtcagttctt 32935362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 15132947 - 15132778
Alignment:
Q  44 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt-tcatttt 142  Q
    |||||||||| |||  |||||||||||||| |||||  ||| |||||||||| |   |||||| |||| | |||||||| |||| |||| ||   |||||    
T  15132947 tttaggtgagcaggtgggtgtttgttggggagattttctttagagacagcctctagcacacggatccacgttcgtcgtcactagttcttattggtatttt 15132848  T
Q  143 tgggttg-ttaaggtgtttagggtg-tttggaggatgcgtgtccgttgcgatgagccttttccttttgat 210  Q
    ||||||| ||||||||||||  | | |||||||| |||||| | |||| ||||||||| |||||||||||    
T  15132847 tgggttgtttaaggtgtttacagagttttggagggtgcgtgcctgttgagatgagcctcttccttttgat 15132778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 304
Target Start/End: Original strand, 12794098 - 12794173
Alignment:
Q  230 aggggtgccctgctgatttggttctaaagtctggtggaccgatc-acttttgatttgagatcaagagtcagctctt 304  Q
    ||||||| ||| ||| |||||||||||||||| |||| |||||| |||||||||| ||||||| ||||||| ||||    
T  12794098 aggggtgtccttctgttttggttctaaagtctagtgggccgatcaacttttgattcgagatcaggagtcagttctt 12794173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 304
Target Start/End: Complemental strand, 26216112 - 26216042
Alignment:
Q  233 ggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctt 304  Q
    |||||||| |||||||| |||||| ||||||||| |||||||||||||||| ||||||  ||||||| ||||    
T  26216112 ggtgcccttctgatttgattctaa-gtctggtgggccgatcacttttgattcgagatcgggagtcagttctt 26216042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 26534813 - 26534757
Alignment:
Q  233 ggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagat 289  Q
    |||| ||| |||||||||| || ||||||||||| |||||||||||||||| |||||    
T  26534813 ggtggccttctgatttggtcctgaagtctggtgggccgatcacttttgattcgagat 26534757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 13423482 - 13423528
Alignment:
Q  262 ggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    |||||||||||||||||||||| |||||| |||||| | ||||||||    
T  13423482 ggtggaccgatcacttttgattcgagatcgagagtcggttctttggc 13423528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 290
Target Start/End: Complemental strand, 7546499 - 7546466
Alignment:
Q  257 agtctggtggaccgatcacttttgatttgagatc 290  Q
    ||||||||||||||||||||||||||| ||||||    
T  7546499 agtctggtggaccgatcacttttgattcgagatc 7546466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 307
Target Start/End: Original strand, 9224010 - 9224102
Alignment:
Q  214 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 307  Q
    ||||| |||||||| ||||| ||||||  | | ||||| |||||||||||||| | |||| ||||||||| ||||||  ||||||| |||||||    
T  9224010 tggtggaccgggggtgaggg-tgcccttttaagttggtcctaaagtctggtgggctgatcgcttttgattcgagatcgggagtcagttctttgg 9224102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 34105410 - 34105466
Alignment:
Q  243 tgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 299  Q
    ||||||| ||||| ||| |||||| |||||||||||||||| ||||||  |||||||    
T  34105410 tgatttgtttctagagtttggtgggccgatcacttttgattcgagatcgggagtcag 34105466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 361
Target Start/End: Complemental strand, 35888 - 35741
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 309  Q
    |||||||||||||||||||||||||||||  ||| |||||||| || ||||| |||| |||||||||||||||| ||||||  ||||||  ||||||  |    
T  35888 tctctggtgtaccgggggcgaggggtgcctagctaatttggttatatagtctagtgggccgatcacttttgattcgagatcgggagtca-ttctttg--a 35792  T
Q  310 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
     |||||||||||||| ||| ||| | ||||||||||||||||||||||||||    
T  35791 cttaagttggtttttgggc-tttatgttgtgctctttcggtggatcggaggt 35741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 60 - 210
Target Start/End: Complemental strand, 36181 - 36028
Alignment:
Q  60 ggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcat---ttttgggttgttaaggt 156  Q
    ||||||||||||||||||||| ||| ||  || ||| |||| || |||||||||  ||||||| ||||||||||||| ||   |||||||| ||| ||||    
T  36181 ggtgtttgttggggtgatttcctttagaagcaacctatgtttcaagggtccatgtccgtcgtctctagctcttgttt-atgccttttgggtggtttaggt 36083  T
Q  157 gtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 210  Q
    |||||  | ||||| ||| || ||||| ||||| | |||||||||||||||||||    
T  36082 gtttacagagtttgaagggtgagtgtcacgttgtgttgagccttttccttttgat 36028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 368
Target Start/End: Original strand, 19366 - 19501
Alignment:
Q  229 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggc 328  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||||||||| ||||||   |||||| ||||||||  | ||||| | |||| |||    
T  19366 gaggggtgcccttctgatttggtcctaaagtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggc--tcaagtttggttttgggc 19463  T
Q  329 ttttgttttgtgctctttcggtggatcggaggttgagagt 368  Q
    |||  || ||   |||||||||||||||||||| ||||||    
T  19464 ttt--ttatggtttctttcggtggatcggaggtcgagagt 19501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 174
Target Start/End: Original strand, 57842 - 57981
Alignment:
Q  39 tgttatttaggtgaggaggcaggtgtttgttgggg--tgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 136  Q
    |||||||||||||||||||  ||||||||||||||  || |||||||||||| |  ||| ||| || |  |||| || |||||||| ||||||| |||||    
T  57842 tgttatttaggtgaggaggtgggtgtttgttggggggtggtttcttttggaggctacctctgtaactcatgtccttgttcgtcgtcactagctcatgttt 57941  T
Q  137 ca--tttttgggttgttaaggtgtttagggtgtttggagg 174  Q
        ||||||||||||||||||||||||||||||||||||    
T  57942 gcgttttttgggttgttaaggtgtttagggtgtttggagg 57981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 58114 - 58164
Alignment:
Q  233 ggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 283  Q
    |||||||| | |||||||| ||||||| |||||| ||||||||||||||||    
T  58114 ggtgcccttcagatttggtcctaaagtttggtgggccgatcacttttgatt 58164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 210 - 306
Target Start/End: Original strand, 36671 - 36767
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttg 306  Q
    |||||||||||||| | | |||||||||||| |||||||||| ||||||||||| || | |||||||||||||| ||||||  ||||||| ||||||    
T  36671 tctctggtgtaccgagagtgaggggtgcccttctgatttggtcctaaagtctggcgggctgatcacttttgattcgagatcgggagtcagttctttg 36767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 175
Target Start/End: Original strand, 36340 - 36495
Alignment:
Q  27 gggggtggtagatgttatttaggtgaggaggcaggtgtttgttgg--ggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgc 124  Q
    ||||||||| | | || |||||||||||||||||||||||  |||  |||||||||||| ||||   |||| |||||| ||||||| || ||||||||      
T  36340 gggggtggttggttttgtttaggtgaggaggcaggtgttttgtgggtggtgatttctttgggaggttgcctctgttactcgggtccttgttcgtcgtcag 36439  T
Q  125 tagctcttgtt----tcatttttgggttgttaaggtg-tttagggtgtttggagga 175  Q
    |||||||||||    |  |||| |||||||||||||| |||||||||||| |||||    
T  36440 tagctcttgttcacgtttttttggggttgttaaggtgttttagggtgtttagagga 36495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 174
Target Start/End: Complemental strand, 42574 - 42432
Alignment:
Q  37 gatgttat-ttaggtgaggaggcaggtgtttgtt-ggggtgatttcttttggagacagcctttgttacacgggtccatg-gtcgtcgtcgctagctcttg 133  Q
    |||||||| |||||||||||||| |||||||||| ||||||||||||| |||||   |||| | |||| ||||||| ||  |||||||| ||||||||||    
T  42574 gatgttatgttaggtgaggaggcgggtgtttgttgggggtgatttcttctggaggttgcctctattactcgggtccttgtttcgtcgtcactagctcttg 42475  T
Q  134 ttt-cattttt-gggttgttaaggtgtttagggtgtttggagg 174  Q
    ||| | ||||| |||||||||| ||||||| ||||||||||||    
T  42474 tttgcgtttttggggttgttaaagtgtttatggtgtttggagg 42432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 229 - 308
Target Start/End: Complemental strand, 42236 - 42157
Alignment:
Q  229 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 308  Q
    |||||||||||| ||||||| || |||||||||||||| |||||||||||||||| ||||||   |||||| ||||||||    
T  42236 gaggggtgcccttctgatttagtcctaaagtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggc 42157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 46784 - 46866
Alignment:
Q  78 ttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgttt 160  Q
    |||||||| || | |||| |||||  |||||||||   ||||||||||||||||||||| | |||||| ||||||||||||||    
T  46784 ttcttttgaaggccgcctctgttattcgggtccatatccgtcgtcgctagctcttgtttgagttttggattgttaaggtgttt 46866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 290
Target Start/End: Original strand, 47057 - 47137
Alignment:
Q  210 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 290  Q
    ||||||||| |||||||| |||||||||||| |||||| |   || | |||||||| ||| ||||||||||||| ||||||    
T  47057 tctctggtgaaccgggggtgaggggtgcccttctgattagaccctgatgtctggtgaaccaatcacttttgattcgagatc 47137  T

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Target: scaffold0062; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 59349 - 59417
Alignment:
Q  116 cgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 184  Q
    ||||||||||||||||||||| | | |||| |||||||||||||| |||||  | ||| ||||||||||    
T  59349 cgtcgtcgctagctcttgtttgagtattggattgttaaggtgttttgggtgccttgagcatgcgtgtcc 59417  T

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Target: scaffold0062; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 71457 - 71525
Alignment:
Q  116 cgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 184  Q
    ||||||||||||||||||||| | | |||| |||||||||||||| ||||| || |||  |||||||||    
T  71457 cgtcgtcgctagctcttgtttgagtattggattgttaaggtgttttgggtgctttgagcgtgcgtgtcc 71525  T

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Target: scaffold1613 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 1359 - 1296
Alignment:
Q  121 tcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 184  Q
    |||||||||||||||| | |||||||| |||||| ||||||||||| || |||| || ||||||    
T  1359 tcgctagctcttgtttgagttttgggtcgttaagatgtttagggtgctttgagggtgtgtgtcc 1296  T

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Target: scaffold1613; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 1107 - 1037
Alignment:
Q  237 ccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 307  Q
    |||| ||||||||||  | ||||||||||| |||||| ||||||||| ||||||  ||||||| |||||||    
T  1107 cccttctgatttggtcatgaagtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttgg 1037  T

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Target: scaffold0343 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 361
Target Start/End: Original strand, 5772 - 5818
Alignment:
Q  315 gttggttttttggcttttgttttgtgctctttcggtggatcggaggt 361  Q
    |||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  5772 gttggtttttgggctttgtttttgtgctctttcggtagatcggaggt 5818  T

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