View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18514_low_11 (Length: 293)

Name: NF18514_low_11
Description: NF18514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18514_low_11
NF18514_low_11
[»] chr1 (31 HSPs)
chr1 (1-146)||(19928839-19928984)
chr1 (33-147)||(38771562-38771676)
chr1 (33-146)||(8548695-8548808)
chr1 (33-142)||(3943912-3944021)
chr1 (33-142)||(20353961-20354070)
chr1 (33-142)||(3993869-3993978)
chr1 (33-146)||(3728669-3728782)
chr1 (44-142)||(20556836-20556934)
chr1 (33-129)||(29622450-29622546)
chr1 (33-146)||(15051374-15051487)
chr1 (33-146)||(26879321-26879434)
chr1 (33-146)||(19914401-19914513)
chr1 (33-119)||(22397781-22397867)
chr1 (44-146)||(13629338-13629440)
chr1 (76-146)||(19924689-19924759)
chr1 (76-146)||(30889995-30890065)
chr1 (33-146)||(2365169-2365282)
chr1 (76-146)||(3732422-3732492)
chr1 (32-147)||(38633178-38633293)
chr1 (33-137)||(3983029-3983134)
chr1 (6-47)||(3983086-3983127)
chr1 (33-137)||(31945887-31945992)
chr1 (6-47)||(31945894-31945935)
chr1 (62-146)||(8473717-8473801)
chr1 (33-152)||(586631-586749)
chr1 (1-47)||(22397819-22397865)
chr1 (76-146)||(43011762-43011832)
chr1 (76-146)||(44621186-44621256)
chr1 (10-47)||(2365234-2365271)
chr1 (33-137)||(38776152-38776257)
chr1 (10-47)||(38776163-38776200)
[»] chr3 (59 HSPs)
chr3 (1-146)||(34051341-34051485)
chr3 (1-146)||(46406619-46406763)
chr3 (1-146)||(49138515-49138659)
chr3 (1-146)||(2950267-2950411)
chr3 (33-142)||(3953241-3953350)
chr3 (35-142)||(6745354-6745461)
chr3 (7-146)||(42900111-42900250)
chr3 (33-142)||(8156446-8156555)
chr3 (36-146)||(41844083-41844193)
chr3 (33-146)||(3501921-3502034)
chr3 (33-146)||(46697645-46697758)
chr3 (33-142)||(54392054-54392163)
chr3 (33-146)||(2857982-2858095)
chr3 (33-146)||(9426565-9426678)
chr3 (31-146)||(2967949-2968064)
chr3 (31-146)||(49144480-49144595)
chr3 (33-148)||(30943121-30943236)
chr3 (33-146)||(35743608-35743719)
chr3 (33-124)||(1835353-1835444)
chr3 (33-146)||(50477114-50477227)
chr3 (67-146)||(25191855-25191934)
chr3 (31-146)||(50998704-50998818)
chr3 (76-147)||(34045341-34045412)
chr3 (33-147)||(1835083-1835197)
chr3 (44-146)||(16444542-16444644)
chr3 (44-146)||(29008820-29008922)
chr3 (76-146)||(46388892-46388962)
chr3 (33-137)||(2645399-2645503)
chr3 (36-147)||(3493522-3493633)
chr3 (36-147)||(3497216-3497327)
chr3 (6-47)||(2645455-2645496)
chr3 (33-146)||(3975666-3975779)
chr3 (76-146)||(19988394-19988464)
chr3 (76-146)||(28817069-28817139)
chr3 (6-47)||(3948728-3948769)
chr3 (6-47)||(30947686-30947727)
chr3 (33-146)||(34543162-34543274)
chr3 (1-41)||(1835155-1835195)
chr3 (6-46)||(3493589-3493629)
chr3 (6-46)||(3497283-3497323)
chr3 (33-85)||(3948724-3948776)
chr3 (33-146)||(11095113-11095222)
chr3 (76-148)||(12898755-12898827)
chr3 (33-85)||(30947679-30947731)
chr3 (33-84)||(8160995-8161046)
chr3 (76-147)||(16851060-16851131)
chr3 (76-146)||(2266965-2267035)
chr3 (1-47)||(8160997-8161043)
chr3 (76-146)||(46702094-46702164)
chr3 (86-120)||(54386093-54386127)
chr3 (33-146)||(4002675-4002787)
chr3 (33-146)||(12897759-12897871)
chr3 (33-98)||(16611083-16611147)
chr3 (33-98)||(22048106-22048170)
chr3 (33-146)||(27739593-27739705)
chr3 (1-38)||(35743427-35743464)
chr3 (33-70)||(35743429-35743466)
chr3 (33-70)||(41844390-41844427)
chr3 (1-38)||(41844392-41844429)
[»] chr2 (52 HSPs)
chr2 (1-146)||(15835205-15835350)
chr2 (1-146)||(42499687-42499831)
chr2 (1-146)||(17426393-17426537)
chr2 (1-142)||(3935768-3935908)
chr2 (33-142)||(41564518-41564627)
chr2 (1-142)||(43984329-43984469)
chr2 (33-151)||(208939-209057)
chr2 (33-139)||(10619940-10620046)
chr2 (33-142)||(5351758-5351867)
chr2 (33-146)||(5355557-5355670)
chr2 (33-142)||(18000170-18000279)
chr2 (33-146)||(17420502-17420615)
chr2 (33-146)||(44100824-44100937)
chr2 (33-142)||(38950553-38950661)
chr2 (35-146)||(7267472-7267583)
chr2 (33-146)||(30493293-30493406)
chr2 (33-147)||(21998147-21998261)
chr2 (33-146)||(43536036-43536149)
chr2 (33-146)||(43619168-43619281)
chr2 (44-146)||(20937832-20937934)
chr2 (33-143)||(22003427-22003537)
chr2 (76-146)||(30497018-30497088)
chr2 (44-146)||(42505799-42505901)
chr2 (76-147)||(43978469-43978540)
chr2 (76-142)||(3940798-3940864)
chr2 (44-146)||(15831061-15831163)
chr2 (76-146)||(39793897-39793967)
chr2 (76-146)||(39800721-39800791)
chr2 (35-146)||(29074031-29074141)
chr2 (31-146)||(45428550-45428665)
chr2 (76-146)||(10424774-10424844)
chr2 (33-143)||(30803044-30803153)
chr2 (1-47)||(43619170-43619216)
chr2 (33-137)||(213478-213583)
chr2 (6-47)||(213485-213526)
chr2 (33-137)||(10624491-10624596)
chr2 (6-47)||(10624498-10624539)
chr2 (6-47)||(18003305-18003346)
chr2 (33-146)||(28468575-28468688)
chr2 (33-146)||(43312666-43312779)
chr2 (76-147)||(5351896-5351968)
chr2 (33-85)||(18003298-18003350)
chr2 (1-41)||(22003429-22003469)
chr2 (27-146)||(3085971-3086089)
chr2 (6-41)||(44100707-44100742)
chr2 (1-39)||(21998221-21998259)
chr2 (76-146)||(39951218-39951288)
chr2 (10-47)||(20937897-20937934)
chr2 (33-146)||(20951072-20951184)
chr2 (33-146)||(36510882-36510994)
chr2 (38-146)||(44100636-44100744)
chr2 (1-41)||(45428621-45428661)
[»] chr4 (46 HSPs)
chr4 (1-146)||(55799557-55799699)
chr4 (1-146)||(41793265-41793409)
chr4 (146-293)||(23757683-23757836)
chr4 (1-142)||(6175785-6175922)
chr4 (1-146)||(49096346-49096490)
chr4 (33-147)||(49563773-49563887)
chr4 (33-146)||(49169123-49169236)
chr4 (33-146)||(31425344-31425457)
chr4 (33-146)||(37562999-37563112)
chr4 (33-146)||(54633746-54633859)
chr4 (33-146)||(30723055-30723168)
chr4 (33-135)||(40358306-40358408)
chr4 (33-146)||(1089610-1089723)
chr4 (33-146)||(1087794-1087907)
chr4 (200-293)||(5433134-5433232)
chr4 (31-146)||(41800961-41801076)
chr4 (33-146)||(26792270-26792383)
chr4 (76-147)||(13173167-13173238)
chr4 (76-146)||(6181860-6181930)
chr4 (76-146)||(49090381-49090451)
chr4 (33-146)||(21022914-21023026)
chr4 (33-146)||(30726767-30726880)
chr4 (33-122)||(31242174-31242263)
chr4 (33-146)||(54634041-54634154)
chr4 (76-146)||(13182167-13182237)
chr4 (96-146)||(39773630-39773680)
chr4 (45-146)||(40352300-40352401)
chr4 (33-146)||(52529147-52529260)
chr4 (33-146)||(14201556-14201665)
chr4 (33-120)||(39773364-39773451)
chr4 (76-146)||(7484665-7484735)
chr4 (76-146)||(7485729-7485799)
chr4 (1-47)||(31242215-31242261)
chr4 (76-146)||(51037536-51037606)
chr4 (44-145)||(1309151-1309252)
chr4 (33-146)||(37563306-37563419)
chr4 (6-47)||(49566482-49566523)
chr4 (33-85)||(49566475-49566527)
chr4 (1-41)||(54634043-54634083)
chr4 (1-43)||(26792272-26792314)
chr4 (76-146)||(40832581-40832651)
chr4 (33-146)||(26932518-26932631)
chr4 (33-122)||(40833636-40833724)
chr4 (1-41)||(37563308-37563348)
chr4 (1-41)||(39773409-39773449)
chr4 (1-41)||(52529218-52529258)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-146)||(84481-84625)
[»] chr7 (50 HSPs)
chr7 (1-146)||(10098267-10098411)
chr7 (1-146)||(16636236-16636381)
chr7 (1-146)||(17459257-17459402)
chr7 (1-146)||(17593812-17593957)
chr7 (1-146)||(48407315-48407460)
chr7 (1-146)||(20566354-20566498)
chr7 (1-123)||(9365603-9365724)
chr7 (33-146)||(603713-603826)
chr7 (33-149)||(43619636-43619752)
chr7 (33-146)||(10097850-10097963)
chr7 (33-142)||(45767887-45767995)
chr7 (33-146)||(41884152-41884265)
chr7 (33-142)||(30791034-30791143)
chr7 (31-150)||(20564003-20564122)
chr7 (33-146)||(35606723-35606836)
chr7 (33-146)||(7004-7116)
chr7 (33-146)||(15074254-15074367)
chr7 (33-142)||(40141252-40141361)
chr7 (36-146)||(42508056-42508166)
chr7 (33-146)||(8073-8185)
chr7 (33-146)||(10098143-10098256)
chr7 (44-146)||(41880448-41880550)
chr7 (33-146)||(7975635-7975748)
chr7 (33-146)||(12210616-12210728)
chr7 (33-146)||(17465739-17465852)
chr7 (33-146)||(17587362-17587475)
chr7 (33-146)||(18105307-18105420)
chr7 (76-146)||(10524425-10524495)
chr7 (76-146)||(49141686-49141756)
chr7 (33-146)||(19804515-19804627)
chr7 (6-47)||(30786546-30786587)
chr7 (76-148)||(7974872-7974944)
chr7 (1-41)||(18105378-18105418)
chr7 (38-137)||(30786489-30786589)
chr7 (35-146)||(13921292-13921402)
chr7 (6-41)||(42508060-42508095)
chr7 (6-45)||(43032975-43033014)
chr7 (1-47)||(7975637-7975683)
chr7 (33-119)||(17834449-17834534)
chr7 (33-147)||(18109800-18109914)
chr7 (76-146)||(27656973-27657043)
chr7 (76-146)||(42582050-42582120)
chr7 (76-122)||(45258072-45258118)
chr7 (33-146)||(45763313-45763427)
chr7 (33-70)||(43032984-43033021)
chr7 (6-47)||(43624178-43624219)
chr7 (6-47)||(45763379-45763420)
chr7 (10-47)||(48403371-48403408)
chr7 (1-41)||(10098145-10098185)
chr7 (1-41)||(15074256-15074296)
[»] chr6 (21 HSPs)
chr6 (3-146)||(27641748-27641890)
chr6 (1-146)||(6207088-6207232)
chr6 (1-146)||(11694055-11694199)
chr6 (33-142)||(1608256-1608365)
chr6 (31-146)||(27616649-27616764)
chr6 (33-146)||(30825984-30826097)
chr6 (33-148)||(18351669-18351784)
chr6 (33-144)||(26712249-26712360)
chr6 (6-148)||(32691083-32691225)
chr6 (33-146)||(13382563-13382676)
chr6 (33-146)||(17597550-17597663)
chr6 (76-146)||(11688048-11688118)
chr6 (33-123)||(28249842-28249932)
chr6 (33-146)||(13164286-13164395)
chr6 (33-146)||(2109452-2109564)
chr6 (1-46)||(32691151-32691196)
chr6 (84-147)||(6760948-6761011)
chr6 (1-46)||(28249885-28249930)
chr6 (1-41)||(13382634-13382674)
chr6 (1-41)||(26712053-26712093)
chr6 (62-142)||(30829706-30829786)
[»] chr5 (24 HSPs)
chr5 (1-146)||(19035139-19035283)
chr5 (33-142)||(14280926-14281035)
chr5 (33-146)||(28238073-28238186)
chr5 (33-143)||(28876580-28876690)
chr5 (33-146)||(37814516-37814629)
chr5 (31-146)||(19041141-19041256)
chr5 (33-146)||(8580505-8580618)
chr5 (44-146)||(11027029-11027131)
chr5 (76-146)||(38860237-38860307)
chr5 (33-146)||(13837658-13837771)
chr5 (33-146)||(27659874-27659987)
chr5 (44-146)||(11033499-11033601)
chr5 (33-137)||(14279792-14279897)
chr5 (51-120)||(38853439-38853508)
chr5 (37-148)||(8574615-8574725)
chr5 (6-49)||(30705134-30705177)
chr5 (76-146)||(28241868-28241938)
chr5 (33-123)||(30711185-30711275)
chr5 (1-47)||(30711187-30711233)
chr5 (33-148)||(3891416-3891530)
chr5 (1-47)||(13837723-13837769)
chr5 (1-47)||(38855739-38855785)
chr5 (76-149)||(13838492-13838565)
chr5 (6-47)||(14279849-14279890)
[»] chr8 (51 HSPs)
chr8 (1-142)||(483721-483861)
chr8 (1-146)||(42481460-42481606)
chr8 (1-146)||(22519590-22519734)
chr8 (33-142)||(7344583-7344692)
chr8 (33-142)||(17924309-17924418)
chr8 (33-146)||(22014180-22014293)
chr8 (34-146)||(36677646-36677758)
chr8 (33-142)||(32375589-32375698)
chr8 (33-149)||(21717-21833)
chr8 (33-129)||(8419355-8419451)
chr8 (50-137)||(17924044-17924131)
chr8 (35-148)||(23018617-23018730)
chr8 (35-146)||(2878518-2878629)
chr8 (33-146)||(1056227-1056340)
chr8 (33-146)||(26663059-26663172)
chr8 (33-146)||(2335174-2335286)
chr8 (33-146)||(15030818-15030931)
chr8 (33-146)||(45066387-45066500)
chr8 (79-146)||(184309-184376)
chr8 (33-146)||(184578-184691)
chr8 (33-146)||(36677955-36678068)
chr8 (33-120)||(22014461-22014548)
chr8 (76-146)||(25603-25673)
chr8 (76-146)||(489695-489765)
chr8 (77-147)||(30301155-30301224)
chr8 (33-145)||(15036728-15036840)
chr8 (76-120)||(22510508-22510552)
chr8 (33-137)||(43211475-43211579)
chr8 (33-147)||(27501534-27501647)
chr8 (76-146)||(42485607-42485677)
chr8 (33-137)||(30305569-30305674)
chr8 (6-47)||(30305576-30305617)
chr8 (33-146)||(44933794-44933906)
chr8 (1-41)||(184580-184620)
chr8 (1-41)||(15030889-15030929)
chr8 (1-41)||(22014463-22014503)
chr8 (1-41)||(36677957-36677997)
chr8 (1-41)||(45066389-45066429)
chr8 (76-146)||(2416137-2416207)
chr8 (33-119)||(22550891-22550976)
chr8 (76-146)||(27502633-27502703)
chr8 (76-146)||(31185513-31185583)
chr8 (6-47)||(7340066-7340107)
chr8 (33-141)||(8423815-8423924)
chr8 (6-47)||(8423822-8423863)
chr8 (33-146)||(28617503-28617615)
chr8 (33-137)||(32378947-32379052)
chr8 (6-47)||(32378954-32378995)
chr8 (33-137)||(32432902-32433007)
chr8 (6-47)||(32432909-32432950)
chr8 (33-85)||(7340062-7340114)
[»] scaffold1606 (1 HSPs)
scaffold1606 (55-149)||(9-103)
[»] scaffold0101 (2 HSPs)
scaffold0101 (1-146)||(41050-41195)
scaffold0101 (33-83)||(41048-41098)
[»] scaffold0744 (1 HSPs)
scaffold0744 (33-146)||(449-561)
[»] scaffold0494 (3 HSPs)
scaffold0494 (44-146)||(11490-11592)
scaffold0494 (1-47)||(5330-5376)
scaffold0494 (10-47)||(11490-11527)
[»] scaffold0293 (2 HSPs)
scaffold0293 (35-143)||(750-858)
scaffold0293 (1-41)||(750-790)
[»] scaffold0038 (2 HSPs)
scaffold0038 (33-123)||(50004-50094)
scaffold0038 (1-46)||(50047-50092)
[»] scaffold0199 (1 HSPs)
scaffold0199 (33-147)||(10586-10699)
[»] scaffold0016 (1 HSPs)
scaffold0016 (76-146)||(69289-69359)
[»] scaffold0513 (1 HSPs)
scaffold0513 (76-146)||(8134-8204)
[»] scaffold0094 (1 HSPs)
scaffold0094 (6-56)||(182-232)
[»] scaffold0634 (1 HSPs)
scaffold0634 (33-146)||(7352-7465)


Alignment Details
Target: chr1 (Bit Score: 114; Significance: 7e-58; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 19928839 - 19928984
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  19928839 ggcacttaactgccgccggcttcctaaaaacttcggcagttaactgccgccggtttcctaaaaacatcagtagcaaactgtcgaggggcattttggtatt 19928938  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  19928939 ttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 19928984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 38771676 - 38771562
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||    
T  38771676 tcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgg 38771577  T
Q  133 gaacatcaattctcc 147  Q
    ||||| |||| ||||    
T  38771576 gaacagcaatactcc 38771562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 8548695 - 8548808
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| ||    
T  8548695 tcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgg 8548794  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  8548795 gaacagcaattctc 8548808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 33 - 142
Target Start/End: Complemental strand, 3944021 - 3943912
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||    
T  3944021 tcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgg 3943922  T
Q  133 gaacatcaat 142  Q
     |||| ||||    
T  3943921 aaacagcaat 3943912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 20353961 - 20354070
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||    
T  20353961 tcggcagttaactgccgccggtttcctaaaaacctcgatagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgg 20354060  T
Q  133 gaacatcaat 142  Q
    ||||| ||||    
T  20354061 gaacagcaat 20354070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 3993869 - 3993978
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||| ||    
T  3993869 tcggcagttaactgccgccggtttcctaaaaacctcgatagcaaactgccgaagggtattttgatattttactcgtgtggcacagccaaacaacatgtgg 3993968  T
Q  133 gaacatcaat 142  Q
    ||||| ||||    
T  3993969 gaacagcaat 3993978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 3728782 - 3728669
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||||||||| | ||||||| |||||||||||||| ||||||||||||||| ||| ||    
T  3728782 tcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaagagcattttcgtattttactcgtgtggcacagccaaacaagatgtgg 3728683  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  3728682 gaacagcaattctc 3728669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 20556934 - 20556836
Alignment:
Q  44 ctgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaat 142  Q
    |||| ||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  20556934 ctgccgccggtttcctaaaaacctcgatagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgggaacagcaat 20556836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 33 - 129
Target Start/End: Original strand, 29622450 - 29622546
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatg 129  Q
    |||||| |||||||| |||||||||| |||||| |||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||    
T  29622450 tcggcaattaactgccgccggtttccaaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatg 29622546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 15051374 - 15051487
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||| ||||| || |||||||||||||||||| ||||||||| |||||||||||||| | |||| |||||||||||| ||    
T  15051374 tcggcagttaactgccgccggtttactaaatacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtgacacaaccaaacaacatgtgg 15051473  T
Q  133 gaacatcaattctc 146  Q
    ||| | ||||||||    
T  15051474 gaagagcaattctc 15051487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 26879321 - 26879434
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||||||||| ||||||||| |||||||||| ||| |||||||||| || | ||| ||    
T  26879321 tcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactggtgtggcacagccatactatatgtgg 26879420  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  26879421 gaacaacaattctc 26879434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 19914513 - 19914401
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||  || |||||| | |||| ||  ||||||||||||||||||  ||| |||||||||| ||||||||||||||||||| ||    
T  19914513 tcggcagttaactgcagccgtatttctaaaa-cttcggaagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaacaacatgtgg 19914415  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  19914414 gaacaacaattctc 19914401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 22397867 - 22397781
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagcc 119  Q
    ||||||||||||||| |||||||| || ||||| |||| ||  ||||||||| ||| |||||||||||||||||||| |||||||||    
T  22397867 tcggcagttaactgccgccggtttactcaaaacttcggcagttaactgccgaagggtattttggtattttactcgtgtggcacagcc 22397781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 146
Target Start/End: Complemental strand, 13629440 - 13629338
Alignment:
Q  44 ctgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaatt 143  Q
    |||| |||||||| || ||||| |||| ||  ||||||||| |||||||||||||||||||||||| |||||| ||| || | ||| ||||||| |||||    
T  13629440 ctgccgccggtttactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacaaccatactatatgtgggaacagcaatt 13629341  T
Q  144 ctc 146  Q
    |||    
T  13629340 ctc 13629338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 19924759 - 19924689
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| || | ||| ||||||| ||||||||    
T  19924759 aactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 19924689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 30890065 - 30889995
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| || | ||| ||||||| ||||||||    
T  30890065 aactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 30889995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 2365282 - 2365169
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    |||| ||||| |||| |||||||| |||||||| |||| ||  ||||||||| |||||||| |||  |||||||||| ||||||||||||| |  || ||    
T  2365282 tcggtagttagctgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttaggtcatttactcgtgtggcacagccaaaccaattgtgg 2365183  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  2365182 gaacaacaattctc 2365169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 3732422 - 3732492
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    |||||||||  ||||||||||||||||||||||| |||||||||| || | ||| ||||||| ||||||||    
T  3732422 aactgccgaatggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 3732492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 38633178 - 38633293
Alignment:
Q  32 ttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcg 131  Q
    |||||||||||||||| | ||||| ||||||||| |||| ||   |||  |||  |||||||  ||| |||||||||| ||||||||||||| | ||| |    
T  38633178 ttcggcagttaactgccgtcggttgcctaaaaacttcggcagtttactatcgaaaggcatttgagtaatttactcgtgtggcacagccaaactatatgtg 38633277  T
Q  132 ggaacatcaattctcc 147  Q
    |||||| |||||||||    
T  38633278 ggaacaacaattctcc 38633293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 137
Target Start/End: Complemental strand, 3983134 - 3983029
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgag-gggcattttggtattttactcgtgcggcacagccaaacaacatgcg 131  Q
    |||| |||||||||| |||||||||||||||||||||| ||  |||||||||| ||| ||||  |||  ||||| ||| |||||||||| || | ||| |    
T  3983134 tcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtg 3983035  T
Q  132 ggaaca 137  Q
    ||||||    
T  3983034 ggaaca 3983029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 3983127 - 3983086
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  3983127 ttaactgccgccggtttcctaaaaacctcggcagttaactgc 3983086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 137
Target Start/End: Original strand, 31945887 - 31945992
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgag-gggcattttggtattttactcgtgcggcacagccaaacaacatgcg 131  Q
    |||| |||||||||| |||||||||||||||||||||| ||  |||||||||| ||| ||||  |||  ||||| ||| |||||||||| || | ||| |    
T  31945887 tcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtg 31945986  T
Q  132 ggaaca 137  Q
    ||||||    
T  31945987 ggaaca 31945992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 31945894 - 31945935
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  31945894 ttaactgccgccggtttcctaaaaacctcggcagttaactgc 31945935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 8473801 - 8473717
Alignment:
Q  62 aaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    |||| |||||||  ||||||||| ||||||||| |||||||||||||| |||||| ||| || | ||| |||||||  |||||||    
T  8473801 aaacttcggtagttaactgccgaagggcattttcgtattttactcgtgtggcacatccatactatatgtgggaacagtaattctc 8473717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 152
Target Start/End: Original strand, 586631 - 586749
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||  || |||||| | |||| ||  ||||||||| ||| ||||  ||| |||||||||| ||||||||||||| | | | ||    
T  586631 tcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgg 586729  T
Q  133 gaacatcaattctccttcat 152  Q
    ||||| |||||||| |||||    
T  586730 gaacagcaattctctttcat 586749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22397865 - 22397819
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||| |||||||||||||| || || |||||||||||||||||||||    
T  22397865 ggcagttaactgccgccggtttactcaaaacttcggcagttaactgc 22397819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 43011832 - 43011762
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||||||| ||||  ||| |||||||||| ||||||||||||| | | | ||||||| ||||||||    
T  43011832 aactgccgaggggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 43011762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 44621186 - 44621256
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||||||||| |||||||||||||| |||||| ||| || | | | ||||||| ||||||||    
T  44621186 aactgccgaagggcattttcgtattttactcgtgtggcacaaccatactatacgtgggaacaacaattctc 44621256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 2365271 - 2365234
Alignment:
Q  10 ctgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||| || ||||||||||||||||||||||||    
T  2365271 ctgccgccggtttactaaaaacttcggcagttaactgc 2365234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 137
Target Start/End: Original strand, 38776152 - 38776257
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgag-gggcattttggtattttactcgtgcggcacagccaaacaacatgcg 131  Q
    |||| ||||| |||| |||||||||||||||||||||| ||  |||||||||| ||| ||||  |||  ||||| ||| |||||||||| || | ||| |    
T  38776152 tcggtagttatctgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtg 38776251  T
Q  132 ggaaca 137  Q
    ||||||    
T  38776252 ggaaca 38776257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 38776163 - 38776200
Alignment:
Q  10 ctgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  38776163 ctgccgccggtttcctaaaaacctcggcagttaactgc 38776200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 2e-55; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 34051341 - 34051485
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34051341 ggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgctgccggtt-cctaaaaacctcggtagcaaactgccgaggggcattttggtatt 34051439  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||||||||||||| | ||| ||||||| ||||||||    
T  34051440 ttactcgtgtggcacagccaaactatatgtgggaacagcaattctc 34051485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 46406619 - 46406763
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  46406619 ggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaggggcattttggtatt 46406717  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| | ||||||||||| | ||| ||||||| ||||||||    
T  46406718 ttactcgtgtgacacagccaaactatatgtgggaacagcaattctc 46406763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 49138659 - 49138515
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  49138659 ggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaggggcattttggtatt 49138561  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    |||||| || ||||||||||||| | ||| ||||||| ||||||||    
T  49138560 ttactcatgtggcacagccaaactatatgtgggaacagcaattctc 49138515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 2950411 - 2950267
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2950411 ggcacttaactgccgccggtgtcctaaaaacttcggcaggtaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaggggcattttggtatt 2950313  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| | |||| |||||| | ||| ||||||| ||||||||    
T  2950312 ttactcgtgtgacacaaccaaactatatgtgggaacagcaattctc 2950267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 3953241 - 3953350
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||    
T  3953241 tcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgg 3953340  T
Q  133 gaacatcaat 142  Q
    ||||| ||||    
T  3953341 gaacagcaat 3953350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 35 - 142
Target Start/End: Original strand, 6745354 - 6745461
Alignment:
Q  35 ggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcggga 134  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||||    
T  6745354 ggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtggga 6745453  T
Q  135 acatcaat 142  Q
    ||| ||||    
T  6745454 acagcaat 6745461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 42900250 - 42900111
Alignment:
Q  7 taactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactc 106  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||| || ||||| || | ||  ||||||||| |||||||||||||||||||||    
T  42900250 taactgccgccggattcttaaaaacttcggcagttaactgccgccggtttactcaaaacttcagcagttaactgccgaagggcattttggtattttactc 42900151  T
Q  107 gtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||| ||||||||||||||||||| ||||||| ||| ||||    
T  42900150 gtgtggcacagccaaacaacatgtgggaacaacaactctc 42900111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 33 - 142
Target Start/End: Complemental strand, 8156555 - 8156446
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||| ||||||||||||||||||| ||    
T  8156555 tcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccaaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgg 8156456  T
Q  133 gaacatcaat 142  Q
    ||||| ||||    
T  8156455 gaacagcaat 8156446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 36 - 146
Target Start/End: Complemental strand, 41844193 - 41844083
Alignment:
Q  36 gcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaa 135  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| |||||    
T  41844193 gcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcatttttgtattttactcgtgtggcacagccaaacaacatgtgggaa 41844094  T
Q  136 catcaattctc 146  Q
     | ||||||||    
T  41844093 gagcaattctc 41844083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 3501921 - 3502034
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||| ||| |||||||||||||| |||||| |||||||||||| ||    
T  3501921 tcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcagtttcgtattttactcgtgtggcacaaccaaacaacatgtgg 3502020  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  3502021 gaacaacaattctc 3502034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 46697758 - 46697645
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||| ||    
T  46697758 tcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaagatgtgg 46697659  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  46697658 gaacagcaattctc 46697645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 54392054 - 54392163
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    |||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||| ||    
T  54392054 tcggcacttaactgccgccggtgtcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgtggcacagccaaactatatgtgg 54392153  T
Q  133 gaacatcaat 142  Q
    ||||| ||||    
T  54392154 gaacagcaat 54392163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 2857982 - 2858095
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||| ||||| || |||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||| ||    
T  2857982 tcggcagttaactgccgccggtttactaaatacttcggtagcaaactgccgaagggcgttttcgtattttactcgtgtggcacagccaaacaacatgtgg 2858081  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  2858082 gaacaacaattctc 2858095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 9426678 - 9426565
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    |||||| |||||||| ||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| || ||| |||||||||||| ||    
T  9426678 tcggcatttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggtacaaccaaacaacatgtgg 9426579  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  9426578 gaacagcaattctc 9426565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 2967949 - 2968064
Alignment:
Q  31 cttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgc 130  Q
    ||||||||| ||||||| ||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||| || | |||     
T  2967949 cttcggcagctaactgccgccggtttccttaaaacttcggtagcaaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgt 2968048  T
Q  131 gggaacatcaattctc 146  Q
    ||||||| ||||||||    
T  2968049 gggaacagcaattctc 2968064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 49144480 - 49144595
Alignment:
Q  31 cttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgc 130  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| | |||||||| || | |||     
T  49144480 cttcggcagttaactgccgccggtttccttaaaacttcggtagcaaactgccgaagggcattttggtattttactcgtgtgacacagccatactatatgt 49144579  T
Q  131 gggaacatcaattctc 146  Q
    ||||||| ||||||||    
T  49144580 gggaacagcaattctc 49144595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 30943236 - 30943121
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||| ||||||||||||||||  |||||||||| ||| ||  |||||||||||||||||||| ||||||||||||||||||| ||    
T  30943236 tcggcagttaactgccgccagtttcctaaaaacctcaatagcaaactgtcgaaggatattttggtattttactcgtgtggcacagccaaacaacatgtgg 30943137  T
Q  133 gaacatcaattctcct 148  Q
    ||||| |||| |||||    
T  30943136 gaacagcaatactcct 30943121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 35743608 - 35743719
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||| |||||||||  | ||||||||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||| ||    
T  35743608 tcggcagttaactgccgccgatttcctaaa--cttcggtagcaaactgccgaatggcattttcgtattttactcgtgtggcacagccaaacaacatgtgg 35743705  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  35743706 gaacagcaattctc 35743719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 124
Target Start/End: Original strand, 1835353 - 1835444
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaaca 124  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||  |||||||| |||||||||||||| |||||| |||||||    
T  1835353 tcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaaca 1835444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 50477227 - 50477114
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||||| |||  | |||||| ||||||||||| || ||||||| ||||||| ||| ||    
T  50477227 tcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgtcgaatgacattttcgtattttactcatgtggcacagtcaaacaagatgtgg 50477128  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  50477127 gaacaacaattctc 50477114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 67 - 146
Target Start/End: Complemental strand, 25191934 - 25191855
Alignment:
Q  67 tcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||||| ||||| | ||||||||    
T  25191934 tcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccgaacaacatgtgggaagagcaattctc 25191855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 50998704 - 50998818
Alignment:
Q  31 cttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgc 130  Q
    ||||||||||||||||| ||||| ||  ||||| | |||| ||  ||||||||||||||||||  ||| |||||||||| ||||||||||||| | ||||    
T  50998704 cttcggcagttaactgcagccggatttataaaa-cttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaatgc 50998802  T
Q  131 gggaacatcaattctc 146  Q
    ||||||| ||||||||    
T  50998803 gggaacaacaattctc 50998818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 34045412 - 34045341
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctcc 147  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| || | ||| ||||||| |||||||||    
T  34045412 aactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaattctcc 34045341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 1835197 - 1835083
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||| ||   ||| |||| ||||||||  |||  ||||||||| |||||||||| || | ||| ||    
T  1835197 tcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgg 1835098  T
Q  133 gaacatcaattctcc 147  Q
    ||||| |||||||||    
T  1835097 gaacagcaattctcc 1835083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 146
Target Start/End: Complemental strand, 16444644 - 16444542
Alignment:
Q  44 ctgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaatt 143  Q
    |||| |||||||| || ||||| |||| ||  ||||||||| |||||||||||||||||||||||| |||||| ||| || | ||| ||||||| |||||    
T  16444644 ctgccgccggtttactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacaaccatactatatgtgggaacagcaatt 16444545  T
Q  144 ctc 146  Q
    |||    
T  16444544 ctc 16444542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 146
Target Start/End: Complemental strand, 29008922 - 29008820
Alignment:
Q  44 ctgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaatt 143  Q
    |||| |||||||  ||| |||| |||||||  ||||||||| ||||||||| |||||||||||||| |||||||||| || | ||| ||||||| |||||    
T  29008922 ctgccgccggttcactacaaacttcggtagttaactgccgaagggcattttcgtattttactcgtgtggcacagccatactatatgtgggaacaacaatt 29008823  T
Q  144 ctc 146  Q
    |||    
T  29008822 ctc 29008820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 46388962 - 46388892
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| || | ||| ||||||| ||||||||    
T  46388962 aactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 46388892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 137
Target Start/End: Complemental strand, 2645503 - 2645399
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||| ||||||||| ||||||||||||||||| |||| ||  |||||||||||| |||||  ||| |||||| ||| |||| |||||||| | ||| ||    
T  2645503 tcggctgttaactgccgccggtttcctaaaaacttcggcagttaactgccgagggacatttgtgtaatttacttgtgtggcatagccaaaccaaatgtgg 2645404  T
Q  133 gaaca 137  Q
    |||||    
T  2645403 gaaca 2645399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 147
Target Start/End: Complemental strand, 3493633 - 3493522
Alignment:
Q  36 gcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaa 135  Q
    |||||||||||| ||||||||| ||||||| |||| ||  ||||| |||||  |||||  ||| |||||||||| ||||||||||||| | ||| |||||    
T  3493633 gcagttaactgccgccggtttcttaaaaacttcggcagttaactgtcgaggaacatttaagtaatttactcgtgtggcacagccaaactaaatgtgggaa 3493534  T
Q  136 catcaattctcc 147  Q
     | |||||||||    
T  3493533 gaacaattctcc 3493522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 147
Target Start/End: Complemental strand, 3497327 - 3497216
Alignment:
Q  36 gcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaa 135  Q
    |||||||||||| ||||||||| ||||||| |||| ||  ||||| |||||  |||||  ||| |||||||||| ||||||||||||| | ||| |||||    
T  3497327 gcagttaactgccgccggtttcttaaaaacttcggcagttaactgtcgaggaacatttaagtaatttactcgtgtggcacagccaaactaaatgtgggaa 3497228  T
Q  136 catcaattctcc 147  Q
     | |||||||||    
T  3497227 gaacaattctcc 3497216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 2645496 - 2645455
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  2645496 ttaactgccgccggtttcctaaaaacttcggcagttaactgc 2645455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 3975779 - 3975666
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||| |||||||| |||  ||   |||||||| ||||||||| |||   |||||||| ||||||||||||| | ||| ||    
T  3975779 tcggcagttaactgccgccggtttactaaaaacttcgacagtttactgccgaagggcattttcgtaaagtactcgtgtggcacagccaaaccaaatgtgg 3975680  T
Q  133 gaacatcaattctc 146  Q
    | ||| ||||||||    
T  3975679 gtacaacaattctc 3975666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 19988464 - 19988394
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||||||||||||  ||| |||||||||| ||||||||||||| | ||| | ||||| ||||||||    
T  19988464 aactgccgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgagaacagcaattctc 19988394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 28817069 - 28817139
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||||||| ||||  ||| |||||||||| ||||||||||||| | | | ||||||||||||||||    
T  28817069 aactgccgaggggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacatcaattctc 28817139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 3948769 - 3948728
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  3948769 ttaactgccgccggtttcctaaaaacctcggcagttaactgc 3948728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 30947686 - 30947727
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  30947686 ttaactgccgccggtttcctaaaaacctcggcagttaactgc 30947727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 34543162 - 34543274
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||  || |||||| | |||| ||  |||||||||||| |||||  ||| ||||||| || ||||||||||||| | ||| ||    
T  34543162 tcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgagggacatttgagtaatttactcatgtggcacagccaaaccaaatgtgg 34543260  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  34543261 gaacaacaattctc 34543274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1835195 - 1835155
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  1835195 ggcagttaactgccgccggtttcctaaaaacttcggcagtt 1835155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 3493629 - 3493589
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactg 46  Q
    |||||||||||||| ||| ||||||||||||||||||||||    
T  3493629 ttaactgccgccggtttcttaaaaacttcggcagttaactg 3493589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 3497323 - 3497283
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactg 46  Q
    |||||||||||||| ||| ||||||||||||||||||||||    
T  3497323 ttaactgccgccggtttcttaaaaacttcggcagttaactg 3497283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 3948776 - 3948724
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgag 85  Q
    |||| |||||||||| |||||||||||||||||||||| ||  ||||||||||    
T  3948776 tcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgag 3948724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 11095113 - 11095222
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| | ||||||| |||     |||| ||| ||||||||||||||||||  ||| |||||||||| |||| |||||||| | | | ||    
T  11095113 tcggcagttaactgcagtcggtttcataat----tcggcagctaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaaccaaacgtgg 11095208  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  11095209 gaacaacaattctc 11095222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 12898755 - 12898827
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctcct 148  Q
    ||||| |||||||||||| ||||  ||||||||| |||| |||||||| | ||| ||||||| ||||||||||    
T  12898755 aactgtcgaggggcatttgggtaaattactcgtgtggcatagccaaaccaaatgtgggaacagcaattctcct 12898827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 30947679 - 30947731
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgag 85  Q
    |||| |||||||||| |||||||||||||||||||||| ||  ||||||||||    
T  30947679 tcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgag 30947731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 8160995 - 8161046
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccga 84  Q
    ||||||||||||||| ||||||| |||||||||||||| ||  |||||||||    
T  8160995 tcggcagttaactgccgccggttgcctaaaaacctcggcagttaactgccga 8161046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 16851131 - 16851060
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctcc 147  Q
    ||||||||||||||||||  |||  ||||||||| |||| |||||||| | ||| ||||||| |||||||||    
T  16851131 aactgccgaggggcatttgagtaaattactcgtgtggcatagccaaactaaatgtgggaacaacaattctcc 16851060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 2267035 - 2266965
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||| ||||||||||||  ||| |||||||||| | ||| ||||||| | ||| ||||||||||||||||    
T  2267035 aactgtcgaggggcatttgagtaatttactcgtgtgacacggccaaaccaaatgtgggaacatcaattctc 2266965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8160997 - 8161043
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||| |||||||||||||| | ||||||||| |||||||||||||||    
T  8160997 ggcagttaactgccgccggttgcctaaaaacctcggcagttaactgc 8161043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 46702094 - 46702164
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    |||||| || || ||||||||||||||||||||| |||||| ||| || | ||| ||||||| ||||||||    
T  46702094 aactgctgaaggacattttggtattttactcgtgtggcacaaccatactatatgtgggaacagcaattctc 46702164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 120
Target Start/End: Complemental strand, 54386127 - 54386093
Alignment:
Q  86 gggcattttggtattttactcgtgcggcacagcca 120  Q
    |||||||||||||||||||||||| ||||||||||    
T  54386127 gggcattttggtattttactcgtgtggcacagcca 54386093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 4002787 - 4002675
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||| || |||||| | |||| |   || |||||||||||||||  | | |||||||||| ||||||||||||| | ||| ||    
T  4002787 tcggcagttaactgcagccggatttctaaaa-cttcggcaattaaatgccgaggggcatttgagcaatttactcgtgtggcacagccaaaccaaatgtgg 4002689  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||| ||||    
T  4002688 gaacaacaactctc 4002675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 12897871 - 12897759
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||  || |||||| | |||| ||  |||||| |||||| ||||  ||| |||||||||| ||||||||||||| | | | ||    
T  12897871 tcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgctgaggggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgg 12897773  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  12897772 gaacaacaattctc 12897759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 16611147 - 16611083
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggta 98  Q
    ||||||||||||||| |||||||| || ||||| |||||||  ||||||||| |||||||| ||||    
T  16611147 tcggcagttaactgccgccggttttct-aaaacttcggtagttaactgccgaagggcatttaggta 16611083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 22048106 - 22048170
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggta 98  Q
    ||||||||||||||| |||||||| || ||||| |||||||  ||||||||| |||||||| ||||    
T  22048106 tcggcagttaactgccgccggttttct-aaaacttcggtagttaactgccgaagggcatttaggta 22048170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 27739593 - 27739705
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||  || |||||| | |||| ||  ||||||||| ||| ||||  ||| |||||||||| ||||||||||||| | | | ||    
T  27739593 tcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgg 27739691  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  27739692 gaacaacaattctc 27739705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 35743464 - 35743427
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggca 38  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  35743464 ggcagttaactgccgccggtttcctaaaaacttcggca 35743427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 35743466 - 35743429
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcgg 70  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  35743466 tcggcagttaactgccgccggtttcctaaaaacttcgg 35743429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 41844390 - 41844427
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcgg 70  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  41844390 tcggcagttaactgccgccggtttcctaaaaacttcgg 41844427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 41844392 - 41844429
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggca 38  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  41844392 ggcagttaactgccgccggtttcctaaaaacttcggca 41844429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 15835205 - 15835350
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||||    
T  15835205 ggcacctaactgccgccggattcttaaaaacttcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaggagcattttgatatt 15835304  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  15835305 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 15835350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 42499831 - 42499687
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| | |||||||||||||||    
T  42499831 ggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccaaagggcattttggtatt 42499733  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||||||||||||| | ||| ||||||| ||||||||    
T  42499732 ttactcgtgtggcacagccaaactatatgtgggaacagcaattctc 42499687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 17426393 - 17426537
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||| |||||    
T  17426393 ggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccgccggtt-cctaaaaacctcagtagcaaactgccgagggacatttttgtatt 17426491  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||||||||||||| | ||| ||||||| ||||||||    
T  17426492 ttactcgtgtggcacagccaaactatatgtgggaacaacaattctc 17426537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 3935908 - 3935768
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||||||||||||||| ||  | |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||||||||||    
T  3935908 ggcacttaactgccgcgggtgttctaaaaacttcggcagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaaggacattttggtatt 3935810  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaat 142  Q
    ||||||||| ||||||||||||| | ||| ||||||| ||||    
T  3935809 ttactcgtgtggcacagccaaactatatgtgggaacagcaat 3935768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 41564518 - 41564627
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||    
T  41564518 tcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgg 41564617  T
Q  133 gaacatcaat 142  Q
    ||||| ||||    
T  41564618 gaacaacaat 41564627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 43984329 - 43984469
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||||||||||||||||||  |||||||||||||| || |||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  43984329 ggcacttaactgccgccggtgtcctaaaaacttcgacaattaactgccgccggtt-cctaaaaacctcggtagcaaactgccgagggacattttggtatt 43984427  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaat 142  Q
    |||||| || ||||||||||||| | ||| ||||||| ||||    
T  43984428 ttactcatgtggcacagccaaactatatgtgggaacagcaat 43984469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 209057 - 208939
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||    
T  209057 tcggcagttaactaccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgg 208958  T
Q  133 gaacatcaattctccttca 151  Q
    ||||| |||| ||| ||||    
T  208957 gaacagcaatcctcattca 208939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 10620046 - 10619940
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||    
T  10620046 tcggcagttaactgccgccgatttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgg 10619947  T
Q  133 gaacatc 139  Q
    |||||||    
T  10619946 gaacatc 10619940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 5351758 - 5351867
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||    
T  5351758 tcggcagttaactaccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgg 5351857  T
Q  133 gaacatcaat 142  Q
    ||||| ||||    
T  5351858 gaacagcaat 5351867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 5355557 - 5355670
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| ||    
T  5355557 tcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgg 5355656  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  5355657 gaacagcaattctc 5355670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 33 - 142
Target Start/End: Complemental strand, 18000279 - 18000170
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||| |||||||||||| ||    
T  18000279 tcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacaaccaaacaacatgtgg 18000180  T
Q  133 gaacatcaat 142  Q
    ||||| ||||    
T  18000179 gaacagcaat 18000170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 17420615 - 17420502
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||| || | ||| ||    
T  17420615 tcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgg 17420516  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  17420515 gaacagcaattctc 17420502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 44100824 - 44100937
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| |||||  ||||||||||||| ||||||||||||||||||| ||    
T  44100824 tcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggtattttcatattttactcgtgtggcacagccaaacaacatgtgg 44100923  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  44100924 gaacaacaattctc 44100937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 38950553 - 38950661
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||  ||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||| ||    
T  38950553 tcggcagttaactgtcgccggtttcctaaaa-cctcggtagcaaactgccgaagggcattttcgtattttactcgtgcgacacagccaaacaacatgtgg 38950651  T
Q  133 gaacatcaat 142  Q
    ||||| ||||    
T  38950652 gaacaacaat 38950661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 7267472 - 7267583
Alignment:
Q  35 ggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcggga 134  Q
    ||||||||||||| ||||||| ||||||||| |||||||||||||||||| | ||||||| |||||||||||||| ||||||||||||||||||| || |    
T  7267472 ggcagttaactgccgccggttccctaaaaacttcggtagcaaactgccgatgagcattttcgtattttactcgtgtggcacagccaaacaacatgtggaa 7267571  T
Q  135 acatcaattctc 146  Q
    ||| ||||||||    
T  7267572 acagcaattctc 7267583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 30493406 - 30493293
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||| | |||| || ||||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||| ||    
T  30493406 tcggcagttaactaccgccgattgcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaagatgtgg 30493307  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  30493306 gaacagcaattctc 30493293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 21998261 - 21998147
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||| |||||||| |||| ||||||||  ||| |||||||||| |||||| |||||| | ||| ||    
T  21998261 tcggcagttaactgccgccggtttcctaaaaacttcggcagcaaactaccgaagggcatttgagtaatttactcgtgtggcacaaccaaactatatgtgg 21998162  T
Q  133 gaacatcaattctcc 147  Q
    |||||||||||||||    
T  21998161 gaacatcaattctcc 21998147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 43536149 - 43536036
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||  | ||||| ||||||||| |||||||||||||| |||  |||||||| |||||||||||||| ||||||||||||||| ||| ||    
T  43536149 tcggcagttaactgtcgtcggttgcctaaaaacttcggtagcaaactgtcgaacggcatttttgtattttactcgtgtggcacagccaaacaagatgtgg 43536050  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  43536049 gaacagcaattctc 43536036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 43619168 - 43619281
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||| |||||||| |||| ||  ||||||||| ||||||||   || |||||||||| ||||||||||||| | ||| ||    
T  43619168 tcggcagttaactgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttgattaatttactcgtgtggcacagccaaaccaaatgtgg 43619267  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  43619268 gaacagcaattctc 43619281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 44 - 146
Target Start/End: Complemental strand, 20937934 - 20937832
Alignment:
Q  44 ctgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaatt 143  Q
    |||| |||||||| |||||||| |||| ||  ||||||||| |||||||| |||| |||||||||| ||||||||||||| | ||| ||||||| |||||    
T  20937934 ctgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttaggtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaatt 20937835  T
Q  144 ctc 146  Q
    |||    
T  20937834 ctc 20937832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 22003427 - 22003537
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||| ||   ||| |||| ||||||||  ||| |||||||||| ||||||||||||| | ||| ||    
T  22003427 tcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgg 22003526  T
Q  133 gaacatcaatt 143  Q
    ||||| |||||    
T  22003527 gaacagcaatt 22003537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 30497018 - 30497088
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| || | ||| ||||||| ||||||||    
T  30497018 aactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 30497088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 146
Target Start/End: Original strand, 42505799 - 42505901
Alignment:
Q  44 ctgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaatt 143  Q
    |||| |||||||| || ||||| |||| ||  ||||||||| ||| |||||||||||||||||||| |||||||||| || | ||| ||||||| |||||    
T  42505799 ctgccgccggtttactcaaaacttcggcagttaactgccgaagggtattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaatt 42505898  T
Q  144 ctc 146  Q
    |||    
T  42505899 ctc 42505901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 43978540 - 43978469
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctcc 147  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| || | ||| ||||||| |||| ||||    
T  43978540 aactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaatactcc 43978469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 3940798 - 3940864
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaat 142  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| || | ||| ||||||| ||||    
T  3940798 aactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaat 3940864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 146
Target Start/End: Complemental strand, 15831163 - 15831061
Alignment:
Q  44 ctgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaatt 143  Q
    |||| |||||||  ||| |||| |||||||  ||||||||| ||| ||||| |||||||||||||| |||||||||| || | ||| ||||||| |||||    
T  15831163 ctgccgccggttcactacaaacttcggtagttaactgccgaagggaattttcgtattttactcgtgtggcacagccatactatatgtgggaacaacaatt 15831064  T
Q  144 ctc 146  Q
    |||    
T  15831063 ctc 15831061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 39793967 - 39793897
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||| || | ||| ||||||| ||||||||    
T  39793967 aactgccgaagggcattttgatattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 39793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 39800721 - 39800791
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||| || | ||| ||||||| ||||||||    
T  39800721 aactgccgaagggcattttgatattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 39800791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 29074031 - 29074141
Alignment:
Q  35 ggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcggga 134  Q
    ||||||||||||| || || || |||||| | |||| ||  ||||||||||||||||||  ||| |||||||||| |||||| |||||| | ||| ||||    
T  29074031 ggcagttaactgccgctggatttctaaaa-cttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacaaccaaaccaaatgtggga 29074129  T
Q  135 acatcaattctc 146  Q
    ||| ||||||||    
T  29074130 acaacaattctc 29074141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 45428665 - 45428550
Alignment:
Q  31 cttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgc 130  Q
    ||||||||||||||||| ||||||||||||||||| || | ||   ||| |||| ||| ||||  |||||||||||||| | |||||||| |  | |||     
T  45428665 cttcggcagttaactgccgccggtttcctaaaaacttcagcagtttactaccgaagggtatttccgtattttactcgtgtgacacagccatattatatgt 45428566  T
Q  131 gggaacatcaattctc 146  Q
    ||||||| ||||||||    
T  45428565 gggaacaacaattctc 45428550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 10424844 - 10424774
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    |||||| |||||||||||  ||| |||||||||| ||||||||||||| | ||| ||||||| ||||||||    
T  10424844 aactgctgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgggaacagcaattctc 10424774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 30803044 - 30803153
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||  || |||||| | |||| ||  |||||||||||| |||||  ||| |||||||||| ||||||||||||| | ||| ||    
T  30803044 tcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcacagccaaaccaaatgtgg 30803142  T
Q  133 gaacatcaatt 143  Q
    ||||| |||||    
T  30803143 gaacaacaatt 30803153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43619170 - 43619216
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||    
T  43619170 ggcagttaactgccgccggtttactaaaaacttcggcagttaactgc 43619216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 137
Target Start/End: Original strand, 213478 - 213583
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgag-gggcattttggtattttactcgtgcggcacagccaaacaacatgcg 131  Q
    |||| |||||||||| |||||||||||||||||||||| ||  |||||||||| ||| ||||  |||  ||||| ||| |||||||||| || | ||| |    
T  213478 tcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtg 213577  T
Q  132 ggaaca 137  Q
    ||||||    
T  213578 ggaaca 213583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 213485 - 213526
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  213485 ttaactgccgccggtttcctaaaaacctcggcagttaactgc 213526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 137
Target Start/End: Original strand, 10624491 - 10624596
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgag-gggcattttggtattttactcgtgcggcacagccaaacaacatgcg 131  Q
    |||| |||||||||| |||||||||||||||||||||| ||  |||||||||| ||| ||||  |||  ||||| ||| |||||||||| || | ||| |    
T  10624491 tcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtg 10624590  T
Q  132 ggaaca 137  Q
    ||||||    
T  10624591 ggaaca 10624596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 10624498 - 10624539
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  10624498 ttaactgccgccggtttcctaaaaacctcggcagttaactgc 10624539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 18003305 - 18003346
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  18003305 ttaactgccgccggtttcctaaaaacctcggcagttaactgc 18003346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 28468688 - 28468575
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||||| | |||| |||| ||   |||  ||| ||| ||||  |||||||||||||| ||||||||||||| | | | ||    
T  28468688 tcggcagttaactgccgccggtttccaacaaacttcggcagtttactatcgaagggtatttgcgtattttactcgtgtggcacagccaaactatacgtgg 28468589  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  28468588 gaacaacaattctc 28468575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 43312779 - 43312666
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| || ||||| |||||||| |||| ||   |||||||| ||||||||| |||   || ||||| || |||||||||| | ||| ||    
T  43312779 tcggcagttaactgccgctggtttactaaaaacttcggcagtttactgccgaagggcattttcgtaaaatattcgtgtggtacagccaaaccaaatgtgg 43312680  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  43312679 gaacaacaattctc 43312666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 5351968 - 5351896
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagc-caaacaacatgcgggaacatcaattctcc 147  Q
    |||||| || |||||||||||||||||||||||| |||||||| || || | ||| ||||||| |||||||||    
T  5351968 aactgcagaagggcattttggtattttactcgtgtggcacagcgcatactatatgtgggaacaacaattctcc 5351896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 18003298 - 18003350
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgag 85  Q
    |||| |||||||||| |||||||||||||||||||||| ||  ||||||||||    
T  18003298 tcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgag 18003350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22003429 - 22003469
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  22003429 ggcagttaactgccgccggtttcctaaaaacttcggcagtt 22003469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 3086089 - 3085971
Alignment:
Q  27 aaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaac 126  Q
    ||||||||||||||||||| | ||||  || |||||| | |||| ||  |||||||||||  |||||  ||| |||||||||| |||||| |||||| |     
T  3086089 aaaacttcggcagttaactacagccgtatttctaaaa-cttcggcagttaactgccgaggaacatttgagtaatttactcgtgtggcacaaccaaactaa 3085991  T
Q  127 atgcgggaacatcaattctc 146  Q
    ||| ||||||| ||||||||    
T  3085990 atgtgggaacaacaattctc 3085971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 44100742 - 44100707
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||||||||||||| |||||||||||||||||||||    
T  44100742 ttaactgccgccggtttcctaaaaacttcggcagtt 44100707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21998259 - 21998221
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcag 39  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  21998259 ggcagttaactgccgccggtttcctaaaaacttcggcag 21998221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 39951218 - 39951288
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||||| ||||||  ||| |||||||||| | ||||||||||| | ||| ||||||| ||||||||    
T  39951218 aactgccgaggagcatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacagcaattctc 39951288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 20937934 - 20937897
Alignment:
Q  10 ctgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||| || ||||||||||||||||||||||||    
T  20937934 ctgccgccggtttactaaaaacttcggcagttaactgc 20937897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 20951072 - 20951184
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||| || | |||  |||||| ||  ||||||||| |||||||| |||| |||||| ||| |||||||||  |  ||||| ||    
T  20951072 tcggcagttaactgcagccggatttc-aaattcctcggcagttaactgccgaagggcatttaggtaatttactggtgtggcacagccttatcacatgtgg 20951170  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  20951171 gaacagcaattctc 20951184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 36510882 - 36510994
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||  || |||||| | |||| ||  ||||||||||||| ||||  ||| |||||||||| | ||||||||||| | | | ||    
T  36510882 tcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgaggggtatttgagtaatttactcgtgtgacacagccaaaccaaaagtgg 36510980  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  36510981 gaacaacaattctc 36510994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 146
Target Start/End: Complemental strand, 44100744 - 44100636
Alignment:
Q  38 agttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaaca 137  Q
    |||||||||| ||||||||||||||||| |||| ||   ||| |||| ||||||||  |||  |||||| || |||||||||| || | ||| | |||||    
T  44100744 agttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcatgtggcacagccataccatatgtgagaaca 44100645  T
Q  138 tcaattctc 146  Q
     ||||||||    
T  44100644 gcaattctc 44100636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 45428661 - 45428621
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||| |||||||||||||| |||||||||||||| ||||||    
T  45428661 ggcagttaactgccgccggtttcctaaaaacttcagcagtt 45428621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 3e-54; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 55799557 - 55799699
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||   ||||||||||||||||||    
T  55799557 ggcacttaactgccgccggattcctaaaaacttcggctgttaactgccgccgatttcctaaaaacctcggtagcaaact---gaggggcattttggtatt 55799653  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  55799654 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 55799699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 41793409 - 41793265
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||||||||||||||||||  |||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41793409 ggcacttaactgccgccggtgtcctaaaaacttcggcagttaattgccgccggtttc-taaaaacctcggtagcaaactgccgaggggcattttggtatt 41793311  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||  ||||||||||||| | ||| ||||||| ||||||||    
T  41793310 ttactcgtatggcacagccaaactatatgtgggaacagcaattctc 41793265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 146 - 293
Target Start/End: Complemental strand, 23757836 - 23757683
Alignment:
Q  146 ccttcatcctttatcttcataaataaaa-aaataaataaaacccannnnnnnncttctttaaaaaattcatcatttcaa-----tcaaaaacaacatatt 239  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||        ||||||||||||||||||||||||||     |||||||||||||| |    
T  23757836 ccttcatccttcatcttcataaataaaataaataaataaaacccattttttttcttctttaaaaaattcatcatttcaacttaatcaaaaacaacataat 23757737  T
Q  240 caaaccttatctaattaacaccatcaccaccatcatctactcataatcaaaact 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23757736 caaaccttatctaattaacaccatcaccaccatcatctactcataatcaaaact 23757683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 6175922 - 6175785
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||   ||||| || |||||||||||||||||||||||||||||||||||||||||    
T  6175922 ggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgc---cggttccc-aaaaacctcggtagcaaactgccgaggggcattttggtatt 6175827  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaat 142  Q
    ||||||||| ||||||||||||| | ||| ||||||| ||||    
T  6175826 ttactcgtgtggcacagccaaactatatgtgggaacaacaat 6175785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 49096346 - 49096490
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    ||||||||| |||||||||  ||| |||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||| |||||||||||||||    
T  49096346 ggcacttaaatgccgccggtgtcccaaaaacttcggcagttaactgccgccagtt-cctaaaaacctcggtagcaaactgccgaagggcattttggtatt 49096444  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| |||||| |||||| | ||| ||||||| ||||||||    
T  49096445 ttactcgtgtggcacaaccaaactatatgtgggaacagcaattctc 49096490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 49563887 - 49563773
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| |     
T  49563887 tcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgc 49563788  T
Q  133 gaacatcaattctcc 147  Q
     ||||||||| ||||    
T  49563787 aaacatcaatactcc 49563773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 49169123 - 49169236
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||| ||    
T  49169123 tcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaaggacattttcgtattttactcgtgtggcacagccaaacaacatgtgg 49169222  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  49169223 gaacagcaattctc 49169236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 31425344 - 31425457
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||| ||    
T  31425344 tcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaaggacattttcgtattttactcgtgtggcacagccaaacaacatgtgg 31425443  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  31425444 gaacaacaattctc 31425457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 37563112 - 37562999
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| | ||||||||||||||||| ||    
T  37563112 tcggcagttaattgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtgacacagccaaacaacatgtgg 37563013  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  37563012 gaacagcaattctc 37562999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 54633859 - 54633746
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||||||||| ||    
T  54633859 tcggcagttaactgccgccggtttcctaaaaccttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagtcaaacaacatgtgg 54633760  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  54633759 gaacagcaattctc 54633746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 30723168 - 30723055
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||| ||| | ||||||||||||||| ||||||||||||| |||| ||||||||| |||||||||||||| ||||||||||||||||||| ||    
T  30723168 tcggcagttaattgccgtcggtttcctaaaaacttcggtagcaaactaccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgg 30723069  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  30723068 gaacagcaattctc 30723055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 40358306 - 40358408
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||||| |||||| |||||||||||||| ||| ||||||||| |||||||||||||| ||||||||||||||||||| ||    
T  40358306 tcggcagttaactgccgccggtttccaaaaaacttcggtagcaaactgtcgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgg 40358405  T
Q  133 gaa 135  Q
    |||    
T  40358406 gaa 40358408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 1089610 - 1089723
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    |||||| |||||||| ||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| |||||||||| || | ||| ||    
T  1089610 tcggcatttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccatactatatgtgg 1089709  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  1089710 gaacaacaattctc 1089723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 1087907 - 1087794
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||||||||| ||||||||| ||||||||||  || |||||||||| || | ||| ||    
T  1087907 tcggcagttaactgccgccgatttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactgatgtggcacagccatactatatgtgg 1087808  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  1087807 gaacagcaattctc 1087794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 200 - 293
Target Start/End: Complemental strand, 5433232 - 5433134
Alignment:
Q  200 tctttaaaaaattcatcatttcaa-----tcaaaaacaacatattcaaaccttatctaattaacaccatcaccaccatcatctactcataatcaaaact 293  Q
    ||||| ||||||||||||||||||     |||||||||||||| |||||||||||||||||||||||||||||||||||||||| | | ||||||||||    
T  5433232 tctttcaaaaattcatcatttcaacttaatcaaaaacaacataatcaaaccttatctaattaacaccatcaccaccatcatctatttagaatcaaaact 5433134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 41800961 - 41801076
Alignment:
Q  31 cttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgc 130  Q
    ||||||||| ||||||| ||||||||||| ||||| ||||||||||||||||||  | ||||||  ||||||||||||| | |||||||| || | |||     
T  41800961 cttcggcagctaactgccgccggtttccttaaaacttcggtagcaaactgccgaatgacattttaatattttactcgtgtgacacagccatactatatgt 41801060  T
Q  131 gggaacatcaattctc 146  Q
    ||||||| ||||||||    
T  41801061 gggaacagcaattctc 41801076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 26792270 - 26792383
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||| |||||||| |||| ||  || |||||| ||||||||  ||| |||||||||| ||||||||||||| | ||| ||    
T  26792270 tcggcagttaactgccgccggtttactaaaaacttcggcagttaattgccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgg 26792369  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  26792370 gaacaacaattctc 26792383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 13173238 - 13173167
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctcc 147  Q
    ||||| ||| |||||||||||||||||||||||| |||||||||| || | ||| |||||||||||||||||    
T  13173238 aactgtcgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacatcaattctcc 13173167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 6181860 - 6181930
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| || | ||| ||||||| ||||||||    
T  6181860 aactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 6181930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 49090451 - 49090381
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| || | ||| ||||||| ||||||||    
T  49090451 aactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 49090381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 21022914 - 21023026
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||  || |||||| | |||| ||  ||||||||||||||||||  ||| |||||||||| ||||||||||||| | ||| ||    
T  21022914 tcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgg 21023012  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  21023013 gaacagcaattctc 21023026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 30726767 - 30726880
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||||||||||||||||||||  |||| ||   ||| |||| || |||||  |||||||||||||| |||||| ||| || | ||| ||    
T  30726767 tcggcagttaactgctgccggtttcctaaaaatttcggcagtttactaccgaaggacatttccgtattttactcgtgtggcacatccatactatatgtgg 30726866  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  30726867 gaacagcaattctc 30726880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 31242263 - 31242174
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaa 122  Q
    ||||||||||||||| |||||||| |||||||| |||| ||  ||||||||| ||||||||  ||| |||||||||| ||||||| ||||    
T  31242263 tcggcagttaactgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttgagtaatttactcgtgtggcacagtcaaa 31242174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 54634041 - 54634154
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||| ||   ||| |||| ||||||||  |||  ||||||||| |||||||||| || | ||| ||    
T  54634041 tcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgg 54634140  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  54634141 gaacagcaattctc 54634154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 13182167 - 13182237
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    |||||||||  ||||||||||||||||||||||| |||||||||| || | ||| ||||||| ||||||||    
T  13182167 aactgccgaaaggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 13182237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 39773630 - 39773680
Alignment:
Q  96 gtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    |||||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  39773630 gtattttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 39773680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 40352401 - 40352300
Alignment:
Q  45 tgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattc 144  Q
    ||||||||||||||||||||| |||| ||   ||| |||| | ||||||| |||||||||||||| |||||| ||| || | ||| ||||||| ||||||    
T  40352401 tgctgccggtttcctaaaaacttcggcagtttactaccgaagagcattttcgtattttactcgtgtggcacaaccatactatatgtgggaacaacaattc 40352302  T
Q  145 tc 146  Q
    ||    
T  40352301 tc 40352300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 52529260 - 52529147
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||| |||||||||||| |||| ||   ||| |||| ||||||||  |||  ||||||||| |||||||||| || | ||| ||    
T  52529260 tcggcagttaactgccgccgatttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgg 52529161  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  52529160 gaacagcaattctc 52529147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 14201556 - 14201665
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||| |||     |||| ||  ||||||||||||||||||  ||| |||||||||| |||| |||||||| | ||| ||    
T  14201556 tcggcagttaactgcagccggtttcataat----tcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaaccaaatgtgg 14201651  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  14201652 gaacagcaattctc 14201665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 39773451 - 39773364
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagcca 120  Q
    ||||||||||||||||||||||||||||||||| |||| ||   ||| |||| || |||||  |||  ||||||||| ||||||||||    
T  39773451 tcggcagttaactgctgccggtttcctaaaaacttcggcagtttactaccgaaggacatttccgtaacttactcgtgtggcacagcca 39773364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 7484735 - 7484665
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    |||||||||||||||||| | ||  ||||||||| |||| |||||||| | ||| ||||||||||||||||    
T  7484735 aactgccgaggggcatttggataaattactcgtgtggcatagccaaaccaaatgtgggaacatcaattctc 7484665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 7485729 - 7485799
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    |||||||||||||||||| ||||  ||||||||| |||| |||||||| | ||| ||||||| ||||||||    
T  7485729 aactgccgaggggcatttgggtaaattactcgtgtggcatagccaaaccaaatgtgggaacaacaattctc 7485799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31242261 - 31242215
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||    
T  31242261 ggcagttaactgccgccggtttactaaaaacttcggcagttaactgc 31242215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 51037536 - 51037606
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    |||||||||||| |||||  ||| |||||||||| ||||||||||||| | ||| ||||||| ||||||||    
T  51037536 aactgccgagggacatttgagtaatttactcgtgtggcacagccaaactaaatgtgggaacaacaattctc 51037606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 145
Target Start/End: Original strand, 1309151 - 1309252
Alignment:
Q  44 ctgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaatt 143  Q
    |||| |||||||| || ||||| |||| ||  ||||||||| ||||||||| |||||||||||||| |||||| ||| || | ||| |||| || |||||    
T  1309151 ctgccgccggtttactcaaaacttcggcagttaactgccgaagggcatttttgtattttactcgtgtggcacaaccatactatatgtgggagcagcaatt 1309250  T
Q  144 ct 145  Q
    ||    
T  1309251 ct 1309252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 37563306 - 37563419
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||  ||   ||| |||| ||||||||  |||  ||||||||| |||||||||  || | ||| ||    
T  37563306 tcggcagttaactgccgccggtttcctaaaaacttcgacagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccttaccatatgtgg 37563405  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  37563406 gaacagcaattctc 37563419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 49566482 - 49566523
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  49566482 ttaactgccgccggtttcctaaaaacctcggcagttaactgc 49566523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 49566475 - 49566527
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgag 85  Q
    |||| |||||||||| |||||||||||||||||||||| ||  ||||||||||    
T  49566475 tcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgag 49566527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 54634043 - 54634083
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  54634043 ggcagttaactgccgccggtttcctaaaaacttcggcagtt 54634083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 26792272 - 26792314
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaa 43  Q
    |||| |||||||||||||| || ||||||||||||||||||||    
T  26792272 ggcagttaactgccgccggtttactaaaaacttcggcagttaa 26792314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 40832651 - 40832581
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||||||||||||   || |||||||||| |||| |||||||| | ||| ||||||| ||||||||    
T  40832651 aactgccgaggggcatttgaataatttactcgtgtggcatagccaaaccaaatgtgggaacagcaattctc 40832581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 26932631 - 26932518
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||| | |||||||  |||||||| |||| ||   ||| |||| || |||||  ||| |||||||||| | ||||||||||| | ||| ||    
T  26932631 tcggcagttaactaccgccggttgtctaaaaacttcggcagtttactaccgaaggacatttgagtaatttactcgtgtgacacagccaaactatatgtgg 26932532  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  26932531 gaacagcaattctc 26932518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 40833636 - 40833724
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaa 122  Q
    ||||||||||||||| ||||  || |||||| | |||| ||  ||||||||||||| ||||  ||| |||||||||| ||||||||||||    
T  40833636 tcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaa 40833724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37563308 - 37563348
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||| |||||||||||||| ||||||||||||||| |||||    
T  37563308 ggcagttaactgccgccggtttcctaaaaacttcgacagtt 37563348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39773449 - 39773409
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||| |||||||| ||||| |||||||||||||||||||||    
T  39773449 ggcagttaactgctgccggtttcctaaaaacttcggcagtt 39773409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 52529258 - 52529218
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||| |||||||||||||  |||||||||||||||||||||    
T  52529258 ggcagttaactgccgccgatttcctaaaaacttcggcagtt 52529218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 84625 - 84481
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  84625 ggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaggggcattttggtatt 84527  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||||||||||||| | ||| ||||||| ||||||||    
T  84526 ttactcgtgtggcacagccaaactatatgtgggaacagcaattctc 84481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 4e-53; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 10098411 - 10098267
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10098411 ggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaggggcattttggtatt 10098313  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||||||||||||| | ||| ||||||| ||||||||    
T  10098312 ttactcgtgtggcacagccaaactatatgtgggaacaacaattctc 10098267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 16636236 - 16636381
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| ||||||||||||| || |    
T  16636236 ggcacctaactgccgccggattcttaaaaacttcggcagttaactgccgtcggtttcctaaaaacttcggtagcaaactgctgaggggcattttgatact 16636335  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  16636336 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 16636381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 17459402 - 17459257
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| ||||||||||||| || |    
T  17459402 ggcacctaactgccgccggattcttaaaaacttcggcagttaactgccgtcggtttcctaaaaacttcggtagcaaactgctgaggggcattttgatact 17459303  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  17459302 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 17459257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 17593812 - 17593957
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| ||||||||||||| || |    
T  17593812 ggcacctaactgccgccggattcttaaaaacttcggcagttaactgccgtcggtttcctaaaaacttcggtagcaaactgctgaggggcattttgatact 17593911  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  17593912 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 17593957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 48407315 - 48407460
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||     
T  48407315 ggcacctaactgcagccggattcataaaaacttcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaggggcattttagtata 48407414  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||||||||||||||||||| ||||| | ||||||||    
T  48407415 ttactcgtgtggcacagccaaacaacatgtgggaagagcaattctc 48407460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 20566354 - 20566498
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| |||| || |||||||||||||||||||||||| |||||||||||||||||||    
T  20566354 ggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccgccgatt-cctaaaaacctcggtagcaaactgtcgaggggcattttggtatt 20566452  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||||||||||||| | ||| ||||||| ||||||||    
T  20566453 ttactcgtgtggcacagccaaactatatgtgggaacaacaattctc 20566498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 9365724 - 9365603
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  9365724 ggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccgccggtt-cctaaaaacttcggtagcaaactgccgaggggcattttggtatt 9365626  T
Q  101 ttactcgtgcggcacagccaaac 123  Q
    ||||||||| |||||||||||||    
T  9365625 ttactcgtgtggcacagccaaac 9365603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 603826 - 603713
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||    
T  603826 tcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttggtattttactcgtgtggcacagccaaacaacatgtgg 603727  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  603726 gaacagcaattctc 603713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 149
Target Start/End: Complemental strand, 43619752 - 43619636
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||||||||||| ||    
T  43619752 tcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaaggatattttggtattttactcgtgtggcacagccaaacaacatgtgg 43619653  T
Q  133 gaacatcaattctcctt 149  Q
    ||||| |||| ||||||    
T  43619652 gaacagcaatcctcctt 43619636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 10097963 - 10097850
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||| ||    
T  10097963 tcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaaggacattttcgtattttactcgtgtggcacagccaaacaacatgtgg 10097864  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  10097863 gaacaacaattctc 10097850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 45767887 - 45767995
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||| ||| ||    
T  45767887 tcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaa-atgtgg 45767985  T
Q  133 gaacatcaat 142  Q
    ||||| ||||    
T  45767986 gaacagcaat 45767995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 41884152 - 41884265
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||| || |||||| |||||||||||||| |||||||||| |||||||| ||    
T  41884152 tcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaaggacattttcgtattttactcgtgtggcacagccacacaacatgtgg 41884251  T
Q  133 gaacatcaattctc 146  Q
    ||| | ||||||||    
T  41884252 gaatagcaattctc 41884265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 30791034 - 30791143
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    |||| |||||||||| |||||||||||||||||||||| |||| |||| ||| ||| |||||||||||||||||||| ||||||||||||||||||| ||    
T  30791034 tcggtagttaactgccgccggtttcctaaaaacctcggcagcatactgtcgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgg 30791133  T
Q  133 gaacatcaat 142  Q
    ||||| ||||    
T  30791134 gaacagcaat 30791143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 20564122 - 20564003
Alignment:
Q  31 cttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgc 130  Q
    ||||||||| ||||||| ||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||  |||||| ||| || | |||     
T  20564122 cttcggcagctaactgccgccggtttccttaaaacttcggtagcaaactgccgaagggcattttggtattttactcgtatggcacaaccatactatatgt 20564023  T
Q  131 gggaacatcaattctccttc 150  Q
    ||||||| ||||||||||||    
T  20564022 gggaacagcaattctccttc 20564003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 35606836 - 35606723
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| | || || ||||||||| ||| |||||||||||||| | ||||||| |||||||||||||| ||||||| ||||||||||| ||    
T  35606836 tcggcagttaactgccgtcgattgcctaaaaacttcgatagcaaactgccgaagagcattttcgtattttactcgtgtggcacaggcaaacaacatgtgg 35606737  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  35606736 gaacaacaattctc 35606723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 7116 - 7004
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||  || |||||| | |||||||  ||||||||||||||||||  ||| |||||||||| ||||||||||||||||||| ||    
T  7116 tcggcagttaactgcagccgtatttctaaaa-cttcggtagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaacaacatgtgg 7018  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  7017 gaacagcaattctc 7004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 15074254 - 15074367
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||| ||| |||| ||   ||| |||| ||||||||| |||||||||||||| |||||||||| || | ||| ||    
T  15074254 tcggcagttaactgccgccggtttcctaagaacttcggcagtttactaccgaagggcattttcgtattttactcgtgtggcacagccatactatatgtgg 15074353  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  15074354 gaacaacaattctc 15074367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 40141252 - 40141361
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||  ||||||||||||||||| |||| | |||||| |||| ||||||||  ||| |||||||||| ||||||||||||| | ||| ||    
T  40141252 tcggcagttaactgtcgccggtttcctaaaaacttcggcaacaaactaccgaagggcatttgagtaatttactcgtgtggcacagccaaactatatgtgg 40141351  T
Q  133 gaacatcaat 142  Q
    ||||| ||||    
T  40141352 gaacaacaat 40141361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 42508056 - 42508166
Alignment:
Q  36 gcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaa 135  Q
    |||||||||||| ||||||||||||||||| |||| ||   ||| |||| ||||||||  |||||||||||||| |||||||||| || | ||| |||||    
T  42508056 gcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtattttactcgtgtggcacagccatactatatgtgggaa 42508155  T
Q  136 catcaattctc 146  Q
    || ||||||||    
T  42508156 caacaattctc 42508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 8073 - 8185
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||  || |||||| | || ||||  ||||||||||||||||||  ||| |||||| ||| ||||||||||||||||||| ||    
T  8073 tcggcagttaactgcagccgtatttctaaaa-cttctgtagttaactgccgaggggcatttgagtaatttacttgtgtggcacagccaaacaacatgtgg 8171  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  8172 gaacagcaattctc 8185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 10098143 - 10098256
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||| ||   ||| |||| ||||||||  |||  ||||||||| |||||||||| || | ||| ||    
T  10098143 tcggcagttaactgcagccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgg 10098242  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  10098243 gaacagcaattctc 10098256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 146
Target Start/End: Complemental strand, 41880550 - 41880448
Alignment:
Q  44 ctgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaatt 143  Q
    |||| |||||||  ||| |||| |||||||  ||||||||| ||||||||| |||||||||||||| |||||| ||| || | ||| ||||||| |||||    
T  41880550 ctgccgccggttcactacaaacttcggtagttaactgccgaagggcattttcgtattttactcgtgtggcacaaccatactatatgtgggaacaacaatt 41880451  T
Q  144 ctc 146  Q
    |||    
T  41880450 ctc 41880448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 7975635 - 7975748
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||| |||||||| |||| ||   |||||||| || |||||| |||   |||||||| |||||| |||||| | ||| ||    
T  7975635 tcggcagttaactgccgccggtttactaaaaacttcggcagtttactgccgaaggacattttcgtaaagtactcgtgtggcacaaccaaaccaaatgtgg 7975734  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  7975735 gaacaacaattctc 7975748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 12210616 - 12210728
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||  || |||||| | |||| ||  ||||||||||||||||||  ||| |||||||||  ||||||||||||| | ||| ||    
T  12210616 tcggcagttaactgcggccgtatttctaaaa-cttcggcagttaactgccgaggggcatttgagtaatttactcgtatggcacagccaaaccaaatgtgg 12210714  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  12210715 gaacagcaattctc 12210728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 17465739 - 17465852
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    |||| ||||| |||| |||||||| |||||||  |||  ||  ||||||||| ||| ||||| |||||||||| ||| |||||||||| || | ||| ||    
T  17465739 tcggtagttagctgccgccggtttactaaaaatttcgacagttaactgccgaagggtattttcgtattttactggtgtggcacagccatactatatgtgg 17465838  T
Q  133 gaacatcaattctc 146  Q
    ||||||||||||||    
T  17465839 gaacatcaattctc 17465852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 17587475 - 17587362
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    |||| ||||| |||| |||||||| |||||||  |||  ||  ||||||||| ||| ||||| |||||||||| ||| |||||||||| || | ||| ||    
T  17587475 tcggtagttagctgccgccggtttactaaaaatttcgacagttaactgccgaagggtattttcgtattttactggtgtggcacagccatactatatgtgg 17587376  T
Q  133 gaacatcaattctc 146  Q
    ||||||||||||||    
T  17587375 gaacatcaattctc 17587362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 18105420 - 18105307
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||| ||   ||| |||| || |||||  |||||||||||||| || || |||| || | ||| ||    
T  18105420 tcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaaggacatttccgtattttactcgtgtggtacggccatactatatgtgg 18105321  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  18105320 gaacaacaattctc 18105307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 10524425 - 10524495
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||||||||||||  ||| |||||||||| | ||||||||||| | ||| ||||||| ||||||||    
T  10524425 aactgccgaggggcatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 10524495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 49141686 - 49141756
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||||||||||||  ||| |||||||||| |||| |||||||| | ||| ||||||| ||||||||    
T  49141686 aactgccgaggggcatttgagtaatttactcgtgtggcatagccaaaccaaatgtgggaacaacaattctc 49141756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 19804515 - 19804627
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||||| | |||| |||| ||  |||| ||||||||||||| ||||  ||||||||| | | ||||||||||| ||| |     
T  19804515 tcggcagttaactgcagccggtttcc-acaaacttcggcagttaactaccgaggggcatttaggtaaattactcgtgtgtctcagccaaacaaaatgtgt 19804613  T
Q  133 gaacatcaattctc 146  Q
     |||| ||||||||    
T  19804614 caacaacaattctc 19804627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 30786587 - 30786546
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  30786587 ttaactgccgccggtttcctaaaaacctcggcagttaactgc 30786546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 7974944 - 7974872
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctcct 148  Q
    ||||||||||||| |||| |||| ||||||||||   | ||||||||||||||| |  |||||||||||||||    
T  7974944 aactgccgaggggtatttgggtaatttactcgtgtttctcagccaaacaacatgtgtcaacatcaattctcct 7974872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18105418 - 18105378
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  18105418 ggcagttaactgccgccggtttcctaaaaacttcggcagtt 18105378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 30786589 - 30786489
Alignment:
Q  38 agttaactgctgccggtttcctaaaaacctcggtagcaaactgccgag-gggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaac 136  Q
    |||||||||| |||||||||||||||||||||| ||  |||||||||| ||| ||||  |||  ||||| ||| |||||||||| || | ||| ||||||    
T  30786589 agttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaac 30786490  T
Q  137 a 137  Q
    |    
T  30786489 a 30786489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 13921292 - 13921402
Alignment:
Q  35 ggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcggga 134  Q
    ||||||||||||| || || || |||||| | |||| ||  ||||||||||| ||||||  ||| |||||||||| |||||| |||||| | ||| ||||    
T  13921292 ggcagttaactgccgctggatttctaaaa-cttcggcagttaactgccgaggagcatttgagtaatttactcgtgtggcacaaccaaaccaaatgtggga 13921390  T
Q  135 acatcaattctc 146  Q
    ||| ||||||||    
T  13921391 acaacaattctc 13921402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 42508060 - 42508095
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||||||||||||| |||||||||||||||||||||    
T  42508060 ttaactgccgccggtttcctaaaaacttcggcagtt 42508095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 43033014 - 43032975
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaact 45  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  43033014 ttaactgccgccggtttcctaaaaacctcggcagttaact 43032975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7975637 - 7975683
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||| |||||||||||||| || |||||||||||||||||| |||||    
T  7975637 ggcagttaactgccgccggtttactaaaaacttcggcagtttactgc 7975683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 17834534 - 17834449
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagcc 119  Q
    ||||||||||||||| |||||||| || ||||| |||| ||  ||||||||| |||||||||  ||  ||||||||| |||||||||    
T  17834534 tcggcagttaactgccgccggtttact-aaaacttcggcagttaactgccgaagggcattttcataaattactcgtgtggcacagcc 17834449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 18109800 - 18109914
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||| |  |||||| |||  ||   |||||||| ||||||||   || ||||||||||  |||||||||||| | ||| ||    
T  18109800 tcggcagttaactgccgccggttgcacaaaaacttcgacagtttactgccgaagggcatttgaataatttactcgtgtagcacagccaaaccaaatgtgg 18109899  T
Q  133 gaacatcaattctcc 147  Q
    ||||| |||||||||    
T  18109900 gaacaacaattctcc 18109914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 27657043 - 27656973
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||||||||||||   || |||||||||| |||||| |||||| | ||| ||||||| ||||||||    
T  27657043 aactgccgaggggcatttgaataatttactcgtgtggcacaaccaaaccaaatgtgggaacagcaattctc 27656973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 42582120 - 42582050
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    |||||||||||| |||||  ||| |||||||||| |||| |||||||| | ||| ||||||| ||||||||    
T  42582120 aactgccgagggacatttgagtaatttactcgtgtggcatagccaaaccaaatgtgggaacagcaattctc 42582050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 45258072 - 45258118
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaa 122  Q
    ||||||||||||||||||  ||| |||||||||| ||||||||||||    
T  45258072 aactgccgaggggcatttgagtaatttactcgtgtggcacagccaaa 45258118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 45763427 - 45763313
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgag-gggcattttggtattttactcgtgcggcacagccaaacaacatgcg 131  Q
    |||| |||||||||  |||||||||||||||||||||| ||  |||||||||| ||| ||||  |||  ||||| ||| |||||||||| || | ||| |    
T  45763427 tcggtagttaactgtcgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtg 45763328  T
Q  132 ggaacatcaattctc 146  Q
    |||||| ||| ||||    
T  45763327 ggaacagcaaatctc 45763313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 43033021 - 43032984
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcgg 70  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  43033021 tcggtagttaactgccgccggtttcctaaaaacctcgg 43032984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 43624178 - 43624219
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||||||  ||||||||||| |||||||||||||||    
T  43624178 ttaactgccgccgatttcctaaaaacctcggcagttaactgc 43624219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 45763420 - 45763379
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    ||||||| |||||| ||||||||||| |||||||||||||||    
T  45763420 ttaactgtcgccggtttcctaaaaacctcggcagttaactgc 45763379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 48403408 - 48403371
Alignment:
Q  10 ctgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||| || ||||||||||||||||||||||||    
T  48403408 ctgccgccggtttgctaaaaacttcggcagttaactgc 48403371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10098145 - 10098185
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||| |||||||| ||||| |||||||||||||||||||||    
T  10098145 ggcagttaactgcagccggtttcctaaaaacttcggcagtt 10098185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15074256 - 15074296
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||| |||||||||||||| ||||||| |||||||||||||    
T  15074256 ggcagttaactgccgccggtttcctaagaacttcggcagtt 15074296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 7e-52; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 27641748 - 27641890
Alignment:
Q  3 cacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatttt 102  Q
    |||| ||||||||||||  |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27641748 cactgaactgccgccggtgtcctaaaaacttcggcagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaggggcattttggtatttt 27641846  T
Q  103 actcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||| ||| ||||||||||||||||||| ||||||| ||||||||    
T  27641847 actagtgtggcacagccaaacaacatgtgggaacagcaattctc 27641890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 6207088 - 6207232
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||| |||||||||||||||    
T  6207088 ggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccgccggtt-cctaaaaacctcgatagcaaactgccgaagggcattttggtatt 6207186  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||||||| ||||| | ||| ||||| | ||||||||    
T  6207187 ttactcgtgtggcacagtcaaactatatgtgggaaaagcaattctc 6207232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 11694055 - 11694199
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||| |||||||||||||   |||||||||||||||||||||| ||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  11694055 ggcaattaactgccgccgatgtcctaaaaacttcggcagttaattgccgccggtt-cctaaaaaccttggtagcaaactgccgaggggcattttggtatt 11694153  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||||||||||||| | ||| ||||||| ||||||||    
T  11694154 ttactcgtgtggcacagccaaactatatgtgggaacagcaattctc 11694199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 33 - 142
Target Start/End: Complemental strand, 1608365 - 1608256
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| ||||||||||||||||||| ||    
T  1608365 tcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttacacgtgtggcacagccaaacaacatgtgg 1608266  T
Q  133 gaacatcaat 142  Q
    ||||| ||||    
T  1608265 gaacagcaat 1608256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 27616764 - 27616649
Alignment:
Q  31 cttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgc 130  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||| || | |||     
T  27616764 cttcggcagttaactgccgccggtttccttaaaacttcggtagcaaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgt 27616665  T
Q  131 gggaacatcaattctc 146  Q
    ||||||| ||||||||    
T  27616664 gggaacagcaattctc 27616649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 30826097 - 30825984
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||||||||| | |||||||  ||||||||||||| ||||||||||||||||||| ||    
T  30826097 tcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaagagcatttttatattttactcgtgtggcacagccaaacaacatgtgg 30825998  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  30825997 gaacagcaattctc 30825984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 18351669 - 18351784
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    |||||||||||||||  |||||||||||||| | |||||||||||||||||| |  ||||||||||||||||||||| ||||||||||||||||||| |     
T  18351669 tcggcagttaactgccaccggtttcctaaaatcttcggtagcaaactgccgaagaacattttggtattttactcgtgtggcacagccaaacaacatgtga 18351768  T
Q  133 gaacatcaattctcct 148  Q
    ||||| ||||||||||    
T  18351769 gaacagcaattctcct 18351784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 33 - 144
Target Start/End: Original strand, 26712249 - 26712360
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| ||| |||||||||||||| ||| |||||  ||||||||||||| |||||||| |||||||||| ||    
T  26712249 tcggcagttaactgccgccggtttcctaaaaacttcgttagcaaactgccgaagggtattttcatattttactcgtgtggcacagctaaacaacatgtgg 26712348  T
Q  133 gaacatcaattc 144  Q
    ||||||||||||    
T  26712349 gaacatcaattc 26712360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 32691225 - 32691083
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttact 105  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||| |||| ||  ||||| ||||||||||||  ||| ||||||    
T  32691225 ttaactgccgccggcttcctaaaaacttcggcagttaactgccgccgatttcctaaaaacttcggcagttaactgtcgaggggcatttgcgtaatttact 32691126  T
Q  106 cgtgcggcacagccaaacaacatgcgggaacatcaattctcct 148  Q
     ||| |||||| |||||| | ||| ||||||| ||||||||||    
T  32691125 tgtgtggcacaaccaaaccaaatgtgggaacaacaattctcct 32691083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 13382676 - 13382563
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||  ||   ||| |||| || |||||  ||| |||||||||| ||||||||||||| | ||| ||    
T  13382676 tcggcagttaactgccgccggtttcctaaaaacttcgtcagtttactaccgaaggacatttgagtaatttactcgtgtggcacagccaaaccaaatgtgg 13382577  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  13382576 gaacaacaattctc 13382563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 17597550 - 17597663
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||  |||||||| |||| |  |||||  ||| |||||||||| || ||||  |||| | ||| ||    
T  17597550 tcggcagttaactgccgccggtttcctaaaaacttcgacagcaaactaccgaagaacatttgagtaatttactcgtgtggtacagttaaactatatgtgg 17597649  T
Q  133 gaacatcaattctc 146  Q
    ||||||||||||||    
T  17597650 gaacatcaattctc 17597663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 11688118 - 11688048
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| ||   ||| ||||||| ||||||||    
T  11688118 aactgccgaagggcattttggtattttactcgtgtggcacagccatactgtatgtgggaacaacaattctc 11688048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 28249932 - 28249842
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaac 123  Q
    ||||||||||||||| ||||||| ||||||||| |||| |   ||||| ||||| ||||||  ||| |||||||||| |||||||||||||    
T  28249932 tcggcagttaactgccgccggttccctaaaaacttcggcatttaactgtcgaggagcatttgagtaatttactcgtgtggcacagccaaac 28249842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 13164286 - 13164395
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    |||| |||||||||| ||||||||| |||     |||||||  ||||||||||||||||||  ||| |||||||||| |||| |||||||| | ||| ||    
T  13164286 tcgggagttaactgcagccggtttcataat----tcggtagttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaactaaatgtgg 13164381  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  13164382 gaacaacaattctc 13164395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 2109564 - 2109452
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||  || |||||| | |||| ||  |||||||||| || ||||  ||| |||||||||| ||||||||||||||| | | ||    
T  2109564 tcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgagaggtatttgagtaatttactcgtgtggcacagccaaacaaaaagtgg 2109466  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  2109465 gaacaacaattctc 2109452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32691196 - 32691151
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactg 46  Q
    |||| |||||||||||||  ||||||||||||||||||||||||||    
T  32691196 ggcagttaactgccgccgatttcctaaaaacttcggcagttaactg 32691151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 6760948 - 6761011
Alignment:
Q  84 aggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctcc 147  Q
    ||||||||||  ||| |||||||||| ||||||||||||| | ||| ||||||| |||||||||    
T  6760948 aggggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgggaacagcaattctcc 6761011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28249930 - 28249885
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactg 46  Q
    |||| |||||||||||||| | |||||||||||||||| |||||||    
T  28249930 ggcagttaactgccgccggttccctaaaaacttcggcatttaactg 28249885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13382674 - 13382634
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||| |||||||||||||| ||||||||||||||| |||||    
T  13382674 ggcagttaactgccgccggtttcctaaaaacttcgtcagtt 13382634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26712093 - 26712053
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||| |||||||||||||  |||||||||||||||||||||    
T  26712093 ggcagttaactgccgccgatttcctaaaaacttcggcagtt 26712053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 30829706 - 30829786
Alignment:
Q  62 aaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaat 142  Q
    |||| |||||||  ||||| ||| ||||||||| |||||||||||||| |||||| ||| || | ||| ||||||| ||||    
T  30829706 aaacttcggtagttaactgtcgaagggcattttcgtattttactcgtgtggcacaaccatactatatgtgggaacagcaat 30829786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 3e-48; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 19035283 - 19035139
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19035283 ggcacttaactgccgccggtgtcctaagaacttcggcagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaggggcattttggtatt 19035185  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||||||| ||||| | ||| ||||||| ||||||||    
T  19035184 ttactcgtgtggcacagtcaaactatatgtgggaacagcaattctc 19035139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 14280926 - 14281035
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| | ||||||||||||||||| ||    
T  14280926 tcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtgacacagccaaacaacatgtgg 14281025  T
Q  133 gaacatcaat 142  Q
    ||||| ||||    
T  14281026 gaacagcaat 14281035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 28238186 - 28238073
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| ||    
T  28238186 tcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgg 28238087  T
Q  133 gaacatcaattctc 146  Q
    ||| | ||||||||    
T  28238086 gaagagcaattctc 28238073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 28876690 - 28876580
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    |||| |||||||||| |||||||||| |||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| ||    
T  28876690 tcgggagttaactgccgccggtttccaaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgg 28876591  T
Q  133 gaacatcaatt 143  Q
    ||||| |||||    
T  28876590 gaacaacaatt 28876580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 37814629 - 37814516
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||| ||||| |  |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||||||| ||    
T  37814629 tcggcagttaactgccgccggtttactaaatatttcggtagcaaactgccgaagggtatttttgtattttactcgtgtggcacagccaaacaacatgtgg 37814530  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  37814529 gaacagcaattctc 37814516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 19041141 - 19041256
Alignment:
Q  31 cttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgc 130  Q
    ||||||||| ||||||| |||| |||| | ||||| |||||||||||||||||| |  ||||||||||||||||||||| |||||||||| || | |||     
T  19041141 cttcggcagctaactgccgccgatttcgttaaaacttcggtagcaaactgccgaagaacattttggtattttactcgtgtggcacagccatactatatgt 19041240  T
Q  131 gggaacatcaattctc 146  Q
    ||||||| ||||||||    
T  19041241 gggaacagcaattctc 19041256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 8580505 - 8580618
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||| |||||||||||| |||| |||||||| |||| ||||||||  ||| |||||||||| |||||||| |||| | ||| ||    
T  8580505 tcggcagttaactgccgccgatttcctaaaaacttcggcagcaaactaccgaagggcatttgagtaatttactcgtgtggcacagctaaactatatgtgg 8580604  T
Q  133 gaacatcaattctc 146  Q
    ||| | ||||||||    
T  8580605 gaatagcaattctc 8580618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 44 - 146
Target Start/End: Complemental strand, 11027131 - 11027029
Alignment:
Q  44 ctgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaatt 143  Q
    |||| |||||||| || ||||| |||| ||  ||||||||| |||||||||||||||||||||||| |||||||||| || | ||| ||||||| |||||    
T  11027131 ctgccgccggtttacttaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaatt 11027032  T
Q  144 ctc 146  Q
    |||    
T  11027031 ctc 11027029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 38860237 - 38860307
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| || | ||| ||||||| ||||||||    
T  38860237 aactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 38860307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 13837771 - 13837658
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||| |||||||| |||| ||   |||||||| ||||||||| |||   |||||||| ||||||||||||  | ||| ||    
T  13837771 tcggcagttaactgccgccggtttactaaaaacttcggcagtttactgccgaagggcatttttgtaaagtactcgtgtggcacagccaaagcaaatgtgg 13837672  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  13837671 gaacagcaattctc 13837658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 27659987 - 27659874
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    |||||||||||| || | ||||||||||||||| |||| ||   ||| |||| ||||||||  ||| |||||||||| ||||||||||||| | ||| ||    
T  27659987 tcggcagttaaccgccgtcggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgg 27659888  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  27659887 gaacagcaattctc 27659874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 146
Target Start/End: Original strand, 11033499 - 11033601
Alignment:
Q  44 ctgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaatt 143  Q
    |||| |||||||| || ||||| |||| ||  ||||||||| || |||||||||||||||||| || |||||||||| || | ||| ||||||| |||||    
T  11033499 ctgccgccggtttactcaaaacttcggcagttaactgccgaaggacattttggtattttactcatgtggcacagccatactatatgtgggaacagcaatt 11033598  T
Q  144 ctc 146  Q
    |||    
T  11033599 ctc 11033601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 137
Target Start/End: Complemental strand, 14279897 - 14279792
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgag-gggcattttggtattttactcgtgcggcacagccaaacaacatgcg 131  Q
    |||| |||||||||| |||||||||||||||||||||||||  |||||||||| ||| ||||  |||  ||||| ||| |||||||||| || | ||| |    
T  14279897 tcgggagttaactgccgccggtttcctaaaaacctcggtagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtg 14279798  T
Q  132 ggaaca 137  Q
    ||||||    
T  14279797 ggaaca 14279792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 38853508 - 38853439
Alignment:
Q  51 cggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagcca 120  Q
    |||||| || ||||| |||| ||  ||||||||| |||||||||||||||||||||||| ||||||||||    
T  38853508 cggtttactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagcca 38853439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 148
Target Start/End: Complemental strand, 8574725 - 8574615
Alignment:
Q  37 cagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaac 136  Q
    ||||||||||| ||| ||||||||||||| |||| ||   ||| |||| ||||||||  ||| ||||||||||  |||||||||||| | ||| ||||||    
T  8574725 cagttaactgccgccagtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtg-tgcacagccaaaccaaatgtgggaac 8574627  T
Q  137 atcaattctcct 148  Q
    | ||||||||||    
T  8574626 aacaattctcct 8574615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 30705177 - 30705134
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgctg 49  Q
    |||||||||||||| || ||||||||||||||||||||||||||    
T  30705177 ttaactgccgccggtttactaaaaacttcggcagttaactgctg 30705134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 28241868 - 28241938
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||| |||||| ||||||||||||| |||||||||| || | ||| ||||||| ||||||||    
T  28241868 aactgccgaagggtattttgatattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 28241938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 30711185 - 30711275
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaac 123  Q
    ||||||||||||||| ||||  ||||||||||| |||| ||  ||||||||||| ||||||  ||| |||||| ||| |||| ||||||||    
T  30711185 tcggcagttaactgccgccgacttcctaaaaacttcggcagttaactgccgaggagcatttgcgtaatttacttgtgtggcatagccaaac 30711275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30711187 - 30711233
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||| |||||||||||||  |||||||||||||||||||||||||||    
T  30711187 ggcagttaactgccgccgacttcctaaaaacttcggcagttaactgc 30711233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 3891530 - 3891416
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||  || |||||| | |||| ||  ||||||||||||| ||||  ||| |||||||||| ||||||||||||  | | | ||    
T  3891530 tcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaagtaaaagtgg 3891432  T
Q  133 gaacatcaattctcct 148  Q
    ||||| ||||||||||    
T  3891431 gaacagcaattctcct 3891416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13837769 - 13837723
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||| |||||||||||||| || |||||||||||||||||| |||||    
T  13837769 ggcagttaactgccgccggtttactaaaaacttcggcagtttactgc 13837723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38855739 - 38855785
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||| |||||||||||||| |||||  ||||||||||||||||||||    
T  38855739 ggcagttaactgccgccggtttccttcaaacttcggcagttaactgc 38855785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 13838492 - 13838565
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctcctt 149  Q
    ||||||||||||| |||| |||| ||||||||||   | ||||||||||||||| |  |||| |||||||||||    
T  13838492 aactgccgaggggtatttgggtaatttactcgtgtttctcagccaaacaacatgtgtcaacagcaattctcctt 13838565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 14279890 - 14279849
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||||||| ||||||||||| |||| ||||||||||    
T  14279890 ttaactgccgccggtttcctaaaaacctcggtagttaactgc 14279849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 6e-46; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 483861 - 483721
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  483861 ggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaagggcattttggtatt 483763  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaat 142  Q
    ||||||||| |||||| |||||| | ||| ||||||| ||||    
T  483762 ttactcgtgtggcacaaccaaactatatgtgggaacaacaat 483721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 42481606 - 42481460
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccga-ggggcattttggtat 99  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| ||||||||||| || ||||||||||| |||    
T  42481606 ggcacctaactgccgccggattcctaaaaacttcggcaattaactgccgccggtttcctaaaaacttcgatagcaaactgctgagggggcattttgatat 42481507  T
Q  100 tttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    |||||||||| ||||||||||||||||| | | ||||| ||||||||    
T  42481506 tttactcgtgtggcacagccaaacaacacgtgagaacagcaattctc 42481460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 22519590 - 22519734
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  22519590 ggcacttaactgccgccggtgtcctaaaaacttcggtagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaagggcattttggtatt 22519688  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| |||||| |||||| | ||| |||||||  |||||||    
T  22519689 ttactcgtgtggcacaaccaaactatatgtgggaacagtaattctc 22519734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 7344583 - 7344692
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||    
T  7344583 tcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgg 7344682  T
Q  133 gaacatcaat 142  Q
    ||||| ||||    
T  7344683 gaacagcaat 7344692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 17924309 - 17924418
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||    
T  17924309 tcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgg 17924408  T
Q  133 gaacatcaat 142  Q
    ||||| ||||    
T  17924409 gaacaacaat 17924418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 22014293 - 22014180
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| ||    
T  22014293 tcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgg 22014194  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  22014193 gaacagcaattctc 22014180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 36677758 - 36677646
Alignment:
Q  34 cggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcggg 133  Q
    |||||||||||||| ||||||||||||||||| | |||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| |||    
T  36677758 cggcagttaactgccgccggtttcctaaaaactttggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtggg 36677659  T
Q  134 aacatcaattctc 146  Q
    |||| ||||||||    
T  36677658 aacaacaattctc 36677646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 142
Target Start/End: Complemental strand, 32375698 - 32375589
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| || ||| |||||| ||||||||||||| ||||||||||||||||||| ||    
T  32375698 tcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgctgaagggtattttgatattttactcgtgtggcacagccaaacaacatgtgg 32375599  T
Q  133 gaacatcaat 142  Q
    ||||| ||||    
T  32375598 gaacagcaat 32375589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 33 - 149
Target Start/End: Complemental strand, 21833 - 21717
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||||||||||||  |||||||| |||||||||||||| ||||||||||||||| ||| ||    
T  21833 tcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaatggcattttcgtattttactcgtgtggcacagccaaacaagatgtgg 21734  T
Q  133 gaacatcaattctcctt 149  Q
    ||||| |||||||||||    
T  21733 gaacaacaattctcctt 21717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 33 - 129
Target Start/End: Complemental strand, 8419451 - 8419355
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatg 129  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||| |||||||||||||||||||    
T  8419451 tcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaaggatattttggtattttactcgtgtggcacagccaaacaacatg 8419355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 17924131 - 17924044
Alignment:
Q  50 ccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaaca 137  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  17924131 ccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgggaaca 17924044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 148
Target Start/End: Complemental strand, 23018730 - 23018617
Alignment:
Q  35 ggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcggga 134  Q
    ||||||||||| | ||||||| ||||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||| || |    
T  23018730 ggcagttaactaccgccggttgcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaagatgtggaa 23018631  T
Q  135 acatcaattctcct 148  Q
    ||| ||||||||||    
T  23018630 acagcaattctcct 23018617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 2878629 - 2878518
Alignment:
Q  35 ggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcggga 134  Q
    ||||||||||||  | |||||| |||||||| ||||| |||||||||||| |||||||||||||||||||||||| | ||||||||||||||| || |||    
T  2878629 ggcagttaactgtcgtcggtttactaaaaacttcggtggcaaactgccgaagggcattttggtattttactcgtgtgacacagccaaacaacacgcagga 2878530  T
Q  135 acatcaattctc 146  Q
    ||| ||||||||    
T  2878529 acaacaattctc 2878518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 1056227 - 1056340
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| || |||| ||||||||| || ||||||||||||||| ||||||||| |||||||||||||| | ||||| ||||||| ||| ||    
T  1056227 tcggcagttaactgccgctggttgcctaaaaacttcagtagcaaactgccgaagggcattttcgtattttactcgtgtgacacagtcaaacaagatgtgg 1056326  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  1056327 gaacaacaattctc 1056340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 26663059 - 26663172
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||||||||| ||  | |||||| |||||||||||||| ||||||||||||||| ||| ||    
T  26663059 tcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgctgaaagacattttcgtattttactcgtgtggcacagccaaacaaaatgtgg 26663158  T
Q  133 gaacatcaattctc 146  Q
    ||| | ||||||||    
T  26663159 gaatagcaattctc 26663172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 2335174 - 2335286
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||  || |||||| | |||||||  ||||||||||||||||||  ||| |||||||||| ||||||||||||||||||| ||    
T  2335174 tcggcagttaactgcagccgtatttctaaaa-cttcggtagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaacaacatgtgg 2335272  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  2335273 gaacaacaattctc 2335286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 15030931 - 15030818
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||| ||   ||| |||| ||||||||  ||| |||||||||| ||||||||||||| | ||| ||    
T  15030931 tcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgg 15030832  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  15030831 gaacaacaattctc 15030818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 45066387 - 45066500
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||| ||   ||| |||| ||||||||  ||| |||||||||| ||||||||||||| | ||| ||    
T  45066387 tcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgg 45066486  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  45066487 gaacaacaattctc 45066500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 146
Target Start/End: Complemental strand, 184376 - 184309
Alignment:
Q  79 tgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  184376 tgccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 184309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 184578 - 184691
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||| ||   ||| |||| ||||||||  |||  ||||||||| |||||||||| || | ||| ||    
T  184578 tcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgg 184677  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  184678 gaacagcaattctc 184691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 36677955 - 36678068
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| |||| ||   ||| |||| ||||||||  |||  ||||||||| |||||||||| || | ||| ||    
T  36677955 tcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgg 36678054  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  36678055 gaacagcaattctc 36678068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 22014461 - 22014548
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagcca 120  Q
    ||||||||||||||| ||||||||||||||||| |||| ||   ||| |||| ||||||||  ||| |||||||||| ||||||||||    
T  22014461 tcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaatttactcgtgtggcacagcca 22014548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 25603 - 25673
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||| || | ||| ||||||| ||||||||    
T  25603 aactgccgaagggcattttgatattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 25673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 489695 - 489765
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||| || | ||| ||||||| ||||||||    
T  489695 aactgccgaagggcattttagtattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 489765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 30301224 - 30301155
Alignment:
Q  77 actgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctcc 147  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||||||||||| ||||||| |||| ||||    
T  30301224 actgccgaagggtattttggtattttactcgtgtggcacag-caaacaacatgtgggaacagcaatactcc 30301155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 145
Target Start/End: Original strand, 15036728 - 15036840
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||||||||||| | || |    ||| |||| ||||||||  ||| |||||||||| ||||||||||||| |  || ||    
T  15036728 tcggcagttaactgccgccggtttcctaaaaactttggcaatttactaccgaagggcatttgcgtaatttactcgtgtggcacagccaaactatgtgtgg 15036827  T
Q  133 gaacatcaattct 145  Q
    ||||| |||||||    
T  15036828 gaacaacaattct 15036840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 22510552 - 22510508
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagcca 120  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||    
T  22510552 aactgccgaagggcattttggtattttactcgtgtggcacagcca 22510508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 137
Target Start/End: Complemental strand, 43211579 - 43211475
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| | |||||| |||||||  |||| || |||||||||| ||||||||| |||   |||||||| ||||||||| ||| | ||| ||    
T  43211579 tcggcagttaactgccgtcggtttactaaaaatttcggcagtaaactgccgaagggcattttcgtaaagtactcgtgtggcacagccgaaccaaatgtgg 43211480  T
Q  133 gaaca 137  Q
    |||||    
T  43211479 gaaca 43211475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 27501647 - 27501534
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||  || |||||| | |||||||  |||||||||| || ||||  ||| |||||||||| ||||||||||||| | | | ||    
T  27501647 tcggcagttaactgcagccgtatttctaaaa-cttcggtagttaactgccgagaggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgg 27501549  T
Q  133 gaacatcaattctcc 147  Q
    ||||| |||||||||    
T  27501548 gaacagcaattctcc 27501534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 42485607 - 42485677
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| || ||||||| ||||||||||||| |||||||||| || | ||| ||||||| ||||||||    
T  42485607 aactgccgaaggacattttgatattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 42485677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 137
Target Start/End: Original strand, 30305569 - 30305674
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgag-gggcattttggtattttactcgtgcggcacagccaaacaacatgcg 131  Q
    |||| |||||||||| |||||||||||||||||||||| ||  |||||||||| ||| ||||  |||  ||||| ||| |||||||||| || | ||| |    
T  30305569 tcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtg 30305668  T
Q  132 ggaaca 137  Q
    ||||||    
T  30305669 ggaaca 30305674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 30305576 - 30305617
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  30305576 ttaactgccgccggtttcctaaaaacctcggcagttaactgc 30305617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 44933906 - 44933794
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||  || |||||| | |||| ||  ||||||||||||||||||  ||| |||||||||| ||||  ||||||| | ||| ||    
T  44933906 tcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcagtgccaaaccaaatgtgg 44933808  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  44933807 gaacaccaattctc 44933794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 184580 - 184620
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  184580 ggcagttaactgccgccggtttcctaaaaacttcggcagtt 184620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15030929 - 15030889
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  15030929 ggcagttaactgccgccggtttcctaaaaacttcggcagtt 15030889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22014463 - 22014503
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  22014463 ggcagttaactgccgccggtttcctaaaaacttcggcagtt 22014503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36677957 - 36677997
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  36677957 ggcagttaactgccgccggtttcctaaaaacttcggcagtt 36677997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45066389 - 45066429
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  45066389 ggcagttaactgccgccggtttcctaaaaacttcggcagtt 45066429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 2416207 - 2416137
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||| ||| || ||||||||||||||||| ||| |||||||||| || | ||| ||||||| ||||||||    
T  2416207 aactgtcgaaggacattttggtattttacttgtgtggcacagccatactatatgtgggaacaacaattctc 2416137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 22550891 - 22550976
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagcc 119  Q
    ||||||||||||||| ||||| || || ||||| |||| ||  ||||||||| |||||||| ||||  ||||||||| |||||||||    
T  22550891 tcggcagttaactgcagccggatttct-aaaacttcggcagttaactgccgaagggcatttaggtaaattactcgtgtggcacagcc 22550976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 27502633 - 27502703
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||||||||||||  ||| |||||||||| |||| |||||||| | |||  |||||| ||||||||    
T  27502633 aactgccgaggggcatttgagtaatttactcgtgtggcatagccaaaccaaatgtaggaacaacaattctc 27502703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 31185513 - 31185583
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||||||| ||||  ||| |||||||||| ||||||||||||| | | | ||||||| ||||||||    
T  31185513 aactgccgaggggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 31185583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 7340107 - 7340066
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||||||| ||| ||||||| |||||||||||||||    
T  7340107 ttaactgccgccggtttcttaaaaacctcggcagttaactgc 7340066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 141
Target Start/End: Original strand, 8423815 - 8423924
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgag-gggcattttggtattttactcgtgcggcacagccaaacaacatgcg 131  Q
    |||| |||||||||| |||| ||||||||||||||||| ||  |||||||||| ||| ||||  |||  ||| | ||| |||||||||| || | ||| |    
T  8423815 tcggtagttaactgccgccgatttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattaatggtgtggcacagccatactatatgtg 8423914  T
Q  132 ggaacatcaa 141  Q
    ||||||||||    
T  8423915 ggaacatcaa 8423924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 8423822 - 8423863
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||||||  ||||||||||| |||||||||||||||    
T  8423822 ttaactgccgccgatttcctaaaaacctcggcagttaactgc 8423863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 28617615 - 28617503
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||  || |||||| | |||| ||  ||||||||| ||| ||||  ||| |||||||||| ||||||||||||| | | | ||    
T  28617615 tcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgg 28617517  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  28617516 gaacagcaattctc 28617503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 137
Target Start/End: Original strand, 32378947 - 32379052
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgag-gggcattttggtattttactcgtgcggcacagccaaacaacatgcg 131  Q
    |||| |||||||||| || ||||||||||||||||||| ||  |||||||||| ||| ||||  |||  ||||| ||| |||||||||| || | ||| |    
T  32378947 tcggtagttaactgccgctggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtg 32379046  T
Q  132 ggaaca 137  Q
    ||||||    
T  32379047 ggaaca 32379052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 32378954 - 32378995
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    ||||||||||| || ||||||||||| |||||||||||||||    
T  32378954 ttaactgccgctggtttcctaaaaacctcggcagttaactgc 32378995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 137
Target Start/End: Original strand, 32432902 - 32433007
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgag-gggcattttggtattttactcgtgcggcacagccaaacaacatgcg 131  Q
    |||| |||||||||| || ||||||||||||||||||| ||  |||||||||| ||| ||||  |||  ||||| ||| |||||||||| || | ||| |    
T  32432902 tcggtagttaactgccgctggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtg 32433001  T
Q  132 ggaaca 137  Q
    ||||||    
T  32433002 ggaaca 32433007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 32432909 - 32432950
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    ||||||||||| || ||||||||||| |||||||||||||||    
T  32432909 ttaactgccgctggtttcctaaaaacctcggcagttaactgc 32432950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 7340114 - 7340062
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgag 85  Q
    |||| |||||||||| ||||||||| |||||||||||| ||  ||||||||||    
T  7340114 tcggtagttaactgccgccggtttcttaaaaacctcggcagttaactgccgag 7340062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1606 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold1606
Description:

Target: scaffold1606; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 9 - 103
Alignment:
Q  55 ttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctcctt 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||| |||||||||||    
T  9 ttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgtggcacagccaaactatatgtgggaacaacaattctcctt 103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 41050 - 41195
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtatt 100  Q
    |||| |||||||||||||| ||||||||||| |||| ||| | |||| |||||||| ||| |||| |||||||  ||||||||| ||| ||||| |||||    
T  41050 ggcagttaactgccgccggtttcctaaaaacctcggtagtaagctgccgccggtttactacaaacttcggtagttaactgccgaagggtattttagtatt 41149  T
Q  101 ttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||| |||||||||| || | ||| ||||||| ||||||||    
T  41150 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 41195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 41048 - 41098
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccg 83  Q
    ||||||||||||||| ||||||||||||||||||||||||| || ||||||    
T  41048 tcggcagttaactgccgccggtttcctaaaaacctcggtagtaagctgccg 41098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 449 - 561
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| ||||||||| ||||||| | |||||||||||||||| ||||||||| |||||||||| ||| |||||| ||| || | ||| ||    
T  449 tcggcagttaactgccgccggtttcttaaaaactt-ggtagcaaactgccgaagggcattttcgtattttactggtgtggcacaaccatactatatgtgg 547  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  548 gaacaacaattctc 561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 44 - 146
Target Start/End: Original strand, 11490 - 11592
Alignment:
Q  44 ctgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaatt 143  Q
    |||| |||||||| |||||||| |||| ||  ||||||||| |||||||| |||| |||||||||| ||||||||||||| | ||| ||||||| |||||    
T  11490 ctgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttaggtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaatt 11589  T
Q  144 ctc 146  Q
    |||    
T  11590 ctc 11592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 5376 - 5330
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||| |||||||||||||| |||||  ||||||||||||||||||||    
T  5376 ggcagttaactgccgccggtttccttcaaacttcggcagttaactgc 5330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 11490 - 11527
Alignment:
Q  10 ctgccgccggattcctaaaaacttcggcagttaactgc 47  Q
    |||||||||| || ||||||||||||||||||||||||    
T  11490 ctgccgccggtttactaaaaacttcggcagttaactgc 11527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 750 - 858
Alignment:
Q  35 ggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcggga 134  Q
    ||||||||||||| ||||||||||||||||| |||| ||   ||| |||| ||||||||  ||||||||||| || |||||||||| || | ||| ||||    
T  750 ggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtattttactcatgtggcacagccatactatatgtggga 849  T
Q  135 acatcaatt 143  Q
    ||| |||||    
T  850 acaacaatt 858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 750 - 790
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagtt 41  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  750 ggcagttaactgccgccggtttcctaaaaacttcggcagtt 790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 50094 - 50004
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaac 123  Q
    ||||||||||||||| ||||||| ||||||||| |||| |   ||||| ||||| ||||||  ||| |||||||||| |||||||||||||    
T  50094 tcggcagttaactgccgccggttccctaaaaacttcggcatttaactgtcgaggagcatttgagtaatttactcgtgtggcacagccaaac 50004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 50092 - 50047
Alignment:
Q  1 ggcacttaactgccgccggattcctaaaaacttcggcagttaactg 46  Q
    |||| |||||||||||||| | |||||||||||||||| |||||||    
T  50092 ggcagttaactgccgccggttccctaaaaacttcggcatttaactg 50047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 10699 - 10586
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    ||||||||||||||| |||||||| || ||||| |||| ||  || |||||| ||||||||  ||| |||||||||| | |||| |||||| | ||| ||    
T  10699 tcggcagttaactgccgccggtttact-aaaacttcggcagttaattgccgaagggcatttaagtaatttactcgtgtgacacaaccaaaccaaatgtgg 10601  T
Q  133 gaacatcaattctcc 147  Q
    ||||| |||||||||    
T  10600 gaacaacaattctcc 10586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 69289 - 69359
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||||||| ||||  ||| |||||||||| ||||||||||||| | | | ||||||||||||||||    
T  69289 aactgccgaggggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacatcaattctc 69359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 8204 - 8134
Alignment:
Q  76 aactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgggaacatcaattctc 146  Q
    ||||||||||| | |||| |||| |||||| |||   | ||||||||||||||||||||||| ||||||||    
T  8204 aactgccgaggagtatttgggtaatttacttgtgattctcagccaaacaacatgcgggaacagcaattctc 8134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 182 - 232
Alignment:
Q  6 ttaactgccgccggattcctaaaaacttcggcagttaactgctgccggttt 56  Q
    |||| ||||||||| |||||||| |||||||||||||||||| ||| ||||    
T  182 ttaattgccgccggcttcctaaatacttcggcagttaactgccgccagttt 232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 7465 - 7352
Alignment:
Q  33 tcggcagttaactgctgccggtttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgcggcacagccaaacaacatgcgg 132  Q
    |||| ||| |||||| ||||| || |||||||| |||| ||   |||||||| ||||||||| |||   |||||||| | ||||||||||| | ||| ||    
T  7465 tcggtagtcaactgccgccgggttactaaaaacttcggcagtttactgccgaagggcattttcgtaaagtactcgtgtgtcacagccaaaccagatgtgg 7366  T
Q  133 gaacatcaattctc 146  Q
    ||||| ||||||||    
T  7365 gaacaacaattctc 7352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University