View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18514_low_2 (Length: 777)
Name: NF18514_low_2
Description: NF18514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18514_low_2 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 722; Significance: 0; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 722; E-Value: 0
Query Start/End: Original strand, 13 - 758
Target Start/End: Complemental strand, 16842669 - 16841924
Alignment:
| Q |
13 |
gtagcaaagggacaactttaacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaatttt |
112 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16842669 |
gtagcgaagggacaactttaacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaatttt |
16842570 |
T |
|
| Q |
113 |
gaagtttttgtgatttcaattggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaactt |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16842569 |
gaagtttttgtgatttcaattggaattgggccaaccagtttgttaaatgataaatataaattagaaagataaggtagatgaaaaagtgatgatggaactt |
16842470 |
T |
|
| Q |
213 |
ggcctgttagactgttagaggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatc |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
16842469 |
ggcctgttagactgttagaggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattaaatacaagatc |
16842370 |
T |
|
| Q |
313 |
acaatgaatgaggtgtttgaggtttgaaagtaatggtgagatctcaccgttaagtttattatttgaaagatccaaatatgttagttgagtgaggttccac |
412 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16842369 |
acaatgaatgaggtgtttgaggtttgaaagtaatggtgagatctcaccgttaagtttattatttgaaagatccaaatatgttagttgagtgaggttccac |
16842270 |
T |
|
| Q |
413 |
aaagatagaggaaccatcccatcaaaattgcaaaatgaaaggactaaatgagtaagagactttaattgacctatggaataggagatttctcctgagaaag |
512 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16842269 |
aaagatagaggaaccatcccatcaaaattgcaaaatgaaaggactaaatgagtaagagactttaattgacctatggaataggagatttctcctgagaaag |
16842170 |
T |
|
| Q |
513 |
cagtatgagagaggtacaagtaccttagaggagtgctccagttggattttggaagttgaccactaaggtcttgattatgtgacaaatctagtctttgaag |
612 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16842169 |
cagtatgagagaggtacaagtaccttagaggagtgctccagttggattttggaagttgaccactaaggtcttgattatgtgacaaatctagtctttgaag |
16842070 |
T |
|
| Q |
613 |
atttgacaaagagagtatgtcacttaacaaatttccttgcaaaccagtgtttgctagatgaagagaaaccaaagaggatgacaaattgtttagcattgac |
712 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16842069 |
atttgacaaagagagtatgtcacttaacaaatttccttgcaaaccagtgtttgctagatgaagagaaaccaaagaggatgacaaattgtttagcattgac |
16841970 |
T |
|
| Q |
713 |
aaagagctctctccgattgaagacatgttcactccatttagataaa |
758 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
16841969 |
aaagagctctctccaattgaagacatgttcactccatttagataaa |
16841924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 25 - 750
Target Start/End: Complemental strand, 24217521 - 24216802
Alignment:
| Q |
25 |
caactttaacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtg |
124 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||| | ||||||||||||||||||||||| | || |||| | | | ||||||||||| ||| ||| |
|
|
| T |
24217521 |
caactctaacaacgaaggcaaggaataacaccattgcggaattgttccatttaacatgttattacccaaatttagaaacttcaattttgaatgtttagtg |
24217422 |
T |
|
| Q |
125 |
atttcaattggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagac |
224 |
Q |
| |
|
||||| |||||| ||||| || | | || || |||| | || | |||||| | || ||||| ||| | ||||||||||| |||||| |||||| |
|
|
| T |
24217421 |
ttttcagatggaatggggcctactaaataattcaaagatagttctagagaagaaagttgagttagattaaacaatgatgatggaatttggccacttagac |
24217322 |
T |
|
| Q |
225 |
tgttagaggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaa-tga |
323 |
Q |
| |
|
| ||| | ||||||| || | | | ||||||| |||||||| || ||||| |||||||| |||| ||||||||||| | |||||| || ||| ||| |
|
|
| T |
24217321 |
tattaaaagaaagtgctaaaaagtttaatttgattaaattttcaaaaacatttgggatgttaccattaaagttattaatttgaagatct-aaggaagtga |
24217223 |
T |
|
| Q |
324 |
ggtgtttgaggtttgaaagtaatggtgagatctcaccgttaagtttattatttgaaagatccaaatatgttagttgagtgaggttccacaaagatagagg |
423 |
Q |
| |
|
||||| |||||||||||||||||| || |||||| || ||||| || || |||||||| || |||| ||||||||||| |||||||||||| ||| |
|
|
| T |
24217222 |
ggtgtgtgaggtttgaaagtaatgatgggatctcgcctttaagattgttgtttgaaaggcttaagaatgtgagttgagtgagcttccacaaagatgaagg |
24217123 |
T |
|
| Q |
424 |
aaccatcccatcaaaattgcaaaatgaaaggactaaatgagtaagagactttaattgacctatggaataggagatttctcctgagaaagcagtatgagag |
523 |
Q |
| |
|
||| | |||||||| ||||| | |||| ||| |||| |||| |||| || ||||| || || || || ||||| ||||||||| ||| |||| |
|
|
| T |
24217122 |
aacaaatccatcaaatttgcaccccgtaagggataagtgagcaagaaacttcaactgaccaatagagtatgaaatttcacctgagaaaccagagaaagag |
24217023 |
T |
|
| Q |
524 |
aggtacaagtaccttagaggagtgctccagttggattttggaagttgaccactaaggtcttgattatgtgacaaatctagtctttgaagatttgacaaag |
623 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||| |||||| || ||||| |||||||||||| ||||||||||||| |||||||||||| |||| |
|
|
| T |
24217022 |
aggtccaagtaccttaggggagtgctccagttggacgttggaaatttaccacgaaggtcttgattcgatgacaaatctagtttttgaagatttggtaaag |
24216923 |
T |
|
| Q |
624 |
agagtatgtcacttaacaaatttccttgcaaaccagtgtttgctagatgaagagaaaccaaagaggatgacaaattgtttagcattgacaaagagctctc |
723 |
Q |
| |
|
|||| ||||||||| ||| |||||||||||| |||||| ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
24216922 |
agaggatgtcacttgacatatttccttgcaatccagtggatgctagactaagagaaaccaaagaggatgacaaattctttag------caaagagctctc |
24216829 |
T |
|
| Q |
724 |
tccgattgaagacatgttcactccatt |
750 |
Q |
| |
|
|| ||||||||| |||| ||||||||| |
|
|
| T |
24216828 |
tctgattgaagatatgtccactccatt |
24216802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 461; Significance: 0; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 461; E-Value: 0
Query Start/End: Original strand, 31 - 755
Target Start/End: Original strand, 37697172 - 37697896
Alignment:
| Q |
31 |
taacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtgatttca |
130 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||| |||||| |||||||| ||| ||||||||||||| |
|
|
| T |
37697172 |
taacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttatcatccaaaaacacataactcaatttggaacgttttgtgatttca |
37697271 |
T |
|
| Q |
131 |
attggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagactgttag |
230 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37697272 |
attggaattggcccaactagtttgttaaatgataaacctaaatgagaaaggtggggtagatgaaaaagtgatgatggaacttggcctgttaggttgttag |
37697371 |
T |
|
| Q |
231 |
aggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatgaggtgttt |
330 |
Q |
| |
|
||||||||| || |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||| |
|
|
| T |
37697372 |
aggaaagtgctaaatattccaatttgattaaatttccataaacaattgggatgctaccgctaaagttattatttgcaagattacaatcaatgaggtgttt |
37697471 |
T |
|
| Q |
331 |
gaggtttgaaagtaatggtgagatctcaccgttaagtttattatttgaaagatccaaatatgttagttgagtgaggttccacaaagatagaggaaccatc |
430 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37697472 |
gaggtttgaaagtaatggtgagatctcaccgttaagtttattatttgaaagatccaaatatgttagttgagtgaggttccacaaagatagaggaaccatc |
37697571 |
T |
|
| Q |
431 |
ccatcaaaattgcaaaatgaaaggactaaatgagtaagagactttaattgacctatggaataggagatttctcctgagaaagcagtatgagagaggtaca |
530 |
Q |
| |
|
|||||||||||||| |||||| |||| |||||||| |||| ||||||||||||||||| | ||||| |||||||||||||| | |||||||| | |
|
|
| T |
37697572 |
ccatcaaaattgcaccatgaaaaatctaatcgagtaagatacttcaattgacctatggaataaggaatttcacctgagaaagcagtgtaagagaggtcta |
37697671 |
T |
|
| Q |
531 |
agtaccttagaggagtgctccagttggattttggaagttgaccactaaggtcttgattatgtgacaaatctagtctttgaagatttgacaaagagagtat |
630 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||| | |||||||||||| | |||||||| || |
|
|
| T |
37697672 |
agtaccttagaggagtgctccagttggactttggaagttgaccactaaggttttgattaaatgacaaatccaatctttgaagattaggtaaagagaggat |
37697771 |
T |
|
| Q |
631 |
gtcacttaacaaatttccttgcaaaccagtgtttgctagatgaagagaaaccaaagaggatgacaaattgtttagcattgacaaagagctctctccgatt |
730 |
Q |
| |
|
||||||| | | |||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
37697772 |
gtcacttgatatatttccttgcaacacagtgtttcgtagactaagagaaaccaaagaggatgacaaattctttagcattgacaatgagctctctccgatt |
37697871 |
T |
|
| Q |
731 |
gaagacatgttcactccatttagat |
755 |
Q |
| |
|
|||||||||||||||||||| |||| |
|
|
| T |
37697872 |
gaagacatgttcactccattaagat |
37697896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 459; E-Value: 0
Query Start/End: Original strand, 25 - 755
Target Start/End: Original strand, 37824274 - 37825004
Alignment:
| Q |
25 |
caactttaacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtg |
124 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||| |||||||||||| ||||||| |
|
|
| T |
37824274 |
caactctaacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttaaagcttaaatccacaatactcaattttgaacgttttgtg |
37824373 |
T |
|
| Q |
125 |
atttcaattggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagac |
224 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37824374 |
atttcaattggaattgggccaactagtttgttagatgataaatataaataagaaagatgaggtagatgaaaaagtgatgatggaacttggcctgttaggt |
37824473 |
T |
|
| Q |
225 |
tgttagaggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatgag |
324 |
Q |
| |
|
||||||||||||||| || |||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
37824474 |
tgttagaggaaagtgctaaatattccaatttgattaaatttccataaacatttgggatgctaccgctaaagttattctctgcaagatcacaatgaatgag |
37824573 |
T |
|
| Q |
325 |
gtgtttgaggtttgaaagtaatggtgagatctcaccgttaagtttattatttgaaagatccaaatatgttagttgagtgaggttccacaaagatagagga |
424 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||| | |||||| ||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
37824574 |
gtgtttgaggtttgaaagtaatggtgagatctcaccgttaagcttattttgtgaaaggtccaaatatgttagttgggtgaggttccacaaagatagagga |
37824673 |
T |
|
| Q |
425 |
accatcccatcaaaattgcaaaatgaaaggactaaatgagtaagagactttaattgacctatggaataggagatttctcctgagaaagcagtatgagaga |
524 |
Q |
| |
|
|| |||||||||||||||||| |||||||| |||| |||||||||||||| ||||||||||||||||| | ||||| ||||| ||||||| ||||| |
|
|
| T |
37824674 |
acaatcccatcaaaattgcaatatgaaaggtctaattgagtaagagacttcaattgacctatggaataaggaatttcacctgaaaaagcagaggaagaga |
37824773 |
T |
|
| Q |
525 |
ggtacaagtaccttagaggagtgctccagttggattttggaagttgaccactaaggtcttgattatgtgacaaatctagtctttgaagatttgacaaaga |
624 |
Q |
| |
|
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||| | |||||||||||| | ||||| |
|
|
| T |
37824774 |
ggtccaagtaccttagaggagtgctccagttggactttggaagttgaccactaaggttatgattaaatgacaaatccaatctttgaagattaggtaaaga |
37824873 |
T |
|
| Q |
625 |
gagtatgtcacttaacaaatttccttgcaaaccagtgtttgctagatgaagagaaaccaaagaggatgacaaattgtttagcattgacaaagagctctct |
724 |
Q |
| |
|
||| ||||||||| | | |||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
37824874 |
gaggatgtcacttgatatatttccttgcaacacagtgtttcgtagactaagagaaaccaaagaggatgacaaattctttagcattgacaatgagctctct |
37824973 |
T |
|
| Q |
725 |
ccgattgaagacatgttcactccatttagat |
755 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |
|
|
| T |
37824974 |
ccgattgaagacatgttcactccattaagat |
37825004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 26 - 744
Target Start/End: Original strand, 37533480 - 37534198
Alignment:
| Q |
26 |
aactttaacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtga |
125 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
37533480 |
aactctaacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttatcactcaaacccacatagctcaattttgaacgttttgtga |
37533579 |
T |
|
| Q |
126 |
tttcaattggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagact |
225 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||| |||||||| |||| |||||| | ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
37533580 |
tttcaattggaattggcccaactagtttgttatatgataaacctaaaatagaaaggtgaggtagatgaaaaagtgatgatggaacttggcctgttaggtt |
37533679 |
T |
|
| Q |
226 |
gttagaggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatgagg |
325 |
Q |
| |
|
||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||||| | ||||||||||| | |||||||||||||||||||| |
|
|
| T |
37533680 |
gttagaggaaagtgataaatattccaatttgattaaatttccataaacatttgggatgctagcactaaagttattcaatccaagatcacaatgaatgagg |
37533779 |
T |
|
| Q |
326 |
tgtttgaggtttgaaagtaatggtgagatctcaccgttaagtttattatttgaaagatccaaatatgttagttgagtgaggttccacaaagatagaggaa |
425 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
37533780 |
tgtttgaggtttgaaagtaatggtgagatctcaccgttaagtttattatgtgaaagatccaaatatgttagttgggtgaggttccacaaagatagaggaa |
37533879 |
T |
|
| Q |
426 |
ccatcccatcaaaattgcaaaatgaaaggactaaatgagtaagagactttaattgacctatggaataggagatttctcctgagaaagcagtatgagagag |
525 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| | ||||| ||||| ||||||| |||||| |
|
|
| T |
37533880 |
ccattccatcaaaattgcagaatgaaaggactaattgagtaagagacttcaattgacctatggaataaggaatttcacctgaaaaagcagagaaagagag |
37533979 |
T |
|
| Q |
526 |
gtacaagtaccttagaggagtgctccagttggattttggaagttgaccactaaggtcttgattatgtgacaaatctagtctttgaagatttgacaaagag |
625 |
Q |
| |
|
| |||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||| ||||||||| | |||||||||||| | |||||| |
|
|
| T |
37533980 |
gaccaagtaccttagaggagtgctccagttggactttggaagttgaccactaaggttatcattagatgacaaatccaatctttgaagattaggtaaagag |
37534079 |
T |
|
| Q |
626 |
agtatgtcacttaacaaatttccttgcaaaccagtgtttgctagatgaagagaaaccaaagaggatgacaaattgtttagcattgacaaagagctctctc |
725 |
Q |
| |
|
|| ||||||||| |||||||||||||||| |||| | || |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
37534080 |
aggatgtcacttgacaaatttccttgcaactcagtttctgatagactaagagaaaccaaagaggatgacaaattctttagcattgacaaagagctctctc |
37534179 |
T |
|
| Q |
726 |
cgattgaagacatgttcac |
744 |
Q |
| |
|
||| |||||||||||||| |
|
|
| T |
37534180 |
tgatggaagacatgttcac |
37534198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 24 - 723
Target Start/End: Original strand, 37640250 - 37640949
Alignment:
| Q |
24 |
acaactttaacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgt |
123 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||| |||||||| ||| ||||| |
|
|
| T |
37640250 |
acaactctaacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttatcatccaaacccacatatctcaatttggaacgttttgc |
37640349 |
T |
|
| Q |
124 |
gatttcaattggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttaga |
223 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37640350 |
gatttcaattggaattgggccaactagtttgttatatgctaaatataaatgagaaagatgaggtagatgaaaaagtgatgatggaacttggcctgttagg |
37640449 |
T |
|
| Q |
224 |
ctgttagaggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatga |
323 |
Q |
| |
|
||||| || ||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
37640450 |
ttgttaaagtaaagtgataaatattccaatttgattaaatttccataaacaattgggatgctaccgctaaagttattaaatccaagatcacaatgaatga |
37640549 |
T |
|
| Q |
324 |
ggtgtttgaggtttgaaagtaatggtgagatctcaccgttaagtttattatttgaaagatccaaatatgttagttgagtgaggttccacaaagatagagg |
423 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
37640550 |
ggtgtttgaggtttgaaagtaatggtgagatctcaccattaagtttattaaatgaaaggtccaaatatgttagttgggtgaggttccacaaagatagagg |
37640649 |
T |
|
| Q |
424 |
aaccatcccatcaaaattgcaaaatgaaaggactaaatgagtaagagactttaattgacctatggaataggagatttctcctgagaaagcagtatgagag |
523 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||| |||||||||||||| ||||||||||||||||| | ||||| ||||||||||||| | | |
|
|
| T |
37640650 |
aaccatcccatctaaattgcaatctgaaaggactaattgagtaagagacttcaattgacctatggaataaggaatttcacctgagaaagcagataaacgg |
37640749 |
T |
|
| Q |
524 |
aggtacaagtaccttagaggagtgctccagttggattttggaagttgaccactaaggtcttgattatgtgacaaatctagtctttgaagatttgacaaag |
623 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||| | |||||||||||| | |||| |
|
|
| T |
37640750 |
aggttcaagtaccttagaggagtgctccagttggactttggaagttgaccactaaggttttgattaaatgacaaatccaatctttgaagattaggtaaag |
37640849 |
T |
|
| Q |
624 |
agagtatgtcacttaacaaatttccttgcaaaccagtgtttgctagatgaagagaaaccaaagaggatgacaaattgtttagcattgacaaagagctctc |
723 |
Q |
| |
|
|||| ||||||||| |||||||||||||||| |||| ||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
37640850 |
agaggatgtcacttgacaaatttccttgcaactcagtttttcgtagactaagagaaaccaaagaggatgacaaattctttagcattgacaaagagctctc |
37640949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 24 - 744
Target Start/End: Complemental strand, 37400594 - 37399874
Alignment:
| Q |
24 |
acaactttaacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgt |
123 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||||||||| |||||| |
|
|
| T |
37400594 |
acaactctaacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttatcacccaaaaacacatagctcaattttgaacgttttgt |
37400495 |
T |
|
| Q |
124 |
gatttcaattggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttaga |
223 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37400494 |
gatttcaattggaattgggccaactagtttgttagatgataaatataaatgagaaagatgaggtagatgaaaaagtgatgatggaacttggcctgttagg |
37400395 |
T |
|
| Q |
224 |
ctgttagaggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatga |
323 |
Q |
| |
|
||||||||||||||| || |||||| |||||| |||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||| |
|
|
| T |
37400394 |
ttgttagaggaaagtgctaaatattccaatttgattaaatttccataaacaattgggatgctactactaaagttattaaatccaagatcacaatgaatga |
37400295 |
T |
|
| Q |
324 |
ggtgtttgaggtttgaaagtaatggtgagatctcaccgttaagtttattatttgaaagatccaaatatgttagttgagtgaggttccacaaagatagagg |
423 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
37400294 |
ggtgtttgaggtttgaaagtaatggtgagatctcaccgttaagtttattaaatgaaaggtccaaatatgttagttgggtgaggttccacaaagatagagg |
37400195 |
T |
|
| Q |
424 |
aaccatcccatcaaaattgcaaaatgaaaggactaaatgagtaagagactttaattgacctatggaataggagatttctcctgagaaagcagtatgagag |
523 |
Q |
| |
|
|||||||||||| |||||||| ||||| |||| |||||||| |||| ||||| ||||||||||||| ||||| ||||| ||||||| |||| |
|
|
| T |
37400194 |
aaccatcccatctaaattgcaccgtgaaaaatctaatcgagtaagatacttcaattggcctatggaatagggaatttcacctgaaaaagcagaggaagag |
37400095 |
T |
|
| Q |
524 |
aggtacaagtaccttagaggagtgctccagttggattttggaagttgaccactaaggtcttgattatgtgacaaatctagtctttgaagatttgacaaag |
623 |
Q |
| |
|
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||| | |||||||||||| | |||| |
|
|
| T |
37400094 |
aggaccaagtaccttagaggagtgctccagttggactttggaagttgaccactaaggttttgattaaatgacaaatccaatctttgaagattaggtaaag |
37399995 |
T |
|
| Q |
624 |
agagtatgtcacttaacaaatttccttgcaaaccagtgtttgctagatgaagagaaaccaaagaggatgacaaattgtttagcattgacaaagagctctc |
723 |
Q |
| |
|
|||| ||||||||| |||||||||||||||| |||| | || |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
37399994 |
agaggatgtcacttgacaaatttccttgcaactcagtttctgatagactaagagaaaccaaagaggatgacaaattctttagcattgacaaagagctctc |
37399895 |
T |
|
| Q |
724 |
tccgattgaagacatgttcac |
744 |
Q |
| |
|
|| || |||||||||||||| |
|
|
| T |
37399894 |
tctgagggaagacatgttcac |
37399874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 25 - 744
Target Start/End: Original strand, 37712003 - 37712722
Alignment:
| Q |
25 |
caactttaacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtg |
124 |
Q |
| |
|
||||| |||||| |||||||||||||||||||| | |||||||||||||||||||||||| ||| |||| ||||||||||||||||||| ||||||| |
|
|
| T |
37712003 |
caactctaacaatgaaggcaaagaataacaccactgtggaattgttccatttaacatgttatcatccaaaaacacatagctcaattttgaacgttttgtg |
37712102 |
T |
|
| Q |
125 |
atttcaattggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagac |
224 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| || ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37712103 |
atttcaattggaattgggccaactagtttgttatctgctaaatataaatgagaaagatgaggtagatgaaaaagtgatgatggaacttggcctgttaggt |
37712202 |
T |
|
| Q |
225 |
tgttagaggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatgag |
324 |
Q |
| |
|
||||||||||||||| || ||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
37712203 |
tgttagaggaaagtgctaaatatttcaatttgattaaatttccataaacatttgggatgctaccgctaaagttattatatgcaagataacaatgaatgag |
37712302 |
T |
|
| Q |
325 |
gtgtttgaggtttgaaagtaatggtgagatctcaccgttaagtttattatttgaaagatccaaatatgttagttgagtgaggttccacaaagatagagga |
424 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||| ||||| |||||||||||||||||| |
|
|
| T |
37712303 |
gtgtttgaggtttgaaagtaatggtgagatctcaccgttaagtttattcaatgaaaggtccaaatgtgttagttgggtgagattccacaaagatagagga |
37712402 |
T |
|
| Q |
425 |
accatcccatcaaaattgcaaaatgaaaggactaaatgagtaagagactttaattgacctatggaataggagatttctcctgagaaagcagtatgagaga |
524 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||| | ||||| ||||| ||||||| ||||| |
|
|
| T |
37712403 |
accatcccatcaaaattgcaatgtgaaaggactaattgagtaagagacttcaattgacctatggaataaggaatttcacctgaaaaagcagaggaagaga |
37712502 |
T |
|
| Q |
525 |
ggtacaagtaccttagaggagtgctccagttggattttggaagttgaccactaaggtcttgattatgtgacaaatctagtctttgaagatttgacaaaga |
624 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||| | |||||||||||| | ||||| |
|
|
| T |
37712503 |
ggaccaagtaccttagaggagtgctccagttggactttggaagttgaccactaaggttttgattaaatgacaaatccaatctttgaagattaggtaaaga |
37712602 |
T |
|
| Q |
625 |
gagtatgtcacttaacaaatttccttgcaaaccagtgtttgctagatgaagagaaaccaaagaggatgacaaattgtttagcattgacaaagagctctct |
724 |
Q |
| |
|
||| ||||||||| | | |||||||||||| |||||| | |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
37712603 |
gaggatgtcacttgatatatttccttgcaacacagtgtctcgtagactaagagaaaccaaagaggatgacaaattctttagcattgacaaagagctctct |
37712702 |
T |
|
| Q |
725 |
ccgattgaagacatgttcac |
744 |
Q |
| |
|
| ||| |||||||||||||| |
|
|
| T |
37712703 |
ctgatggaagacatgttcac |
37712722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 31 - 723
Target Start/End: Original strand, 37703053 - 37703745
Alignment:
| Q |
31 |
taacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtgatttca |
130 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
37703053 |
taacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttatccctcaaacccacatagctcaattttgaacgttttgtgatttca |
37703152 |
T |
|
| Q |
131 |
attggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagactgttag |
230 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||| |||| | |||| | ||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37703153 |
attggaattggcccaactagtttgttaaatgataaacctaaaataaaaaggtgaggtagatgaaaaagtgatgatggaacttggcctgttagcttgttag |
37703252 |
T |
|
| Q |
231 |
aggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatgaggtgttt |
330 |
Q |
| |
|
|||||||||||| |||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
37703253 |
aggaaagtgataaatattccaatttgtttaaatttccataaacaattgggatgcctccgctaaagttattatatgcaagattacaatgaatgaggtgttt |
37703352 |
T |
|
| Q |
331 |
gaggtttgaaagtaatggtgagatctcaccgttaagtttattatttgaaagatccaaatatgttagttgagtgaggttccacaaagatagaggaaccatc |
430 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
37703353 |
gaggtttgaaagtaatggtgagatctcaccgttaagtttattaaatgaaaggtccaaatatgttagttgggtgagattccacaaagatagaggaaccatc |
37703452 |
T |
|
| Q |
431 |
ccatcaaaattgcaaaatgaaaggactaaatgagtaagagactttaattgacctatggaataggagatttctcctgagaaagcagtatgagagaggtaca |
530 |
Q |
| |
|
||||| ||||||||| ||||||| |||| |||||||||||||| ||||||||||||||||| | ||||| ||||| ||||||| |||||||| || |
|
|
| T |
37703453 |
ccatctaaattgcaatgtgaaaggtctaattgagtaagagacttcaattgacctatggaataaggaatttcacctgaaaaagcagaggaagagaggttca |
37703552 |
T |
|
| Q |
531 |
agtaccttagaggagtgctccagttggattttggaagttgaccactaaggtcttgattatgtgacaaatctagtctttgaagatttgacaaagagagtat |
630 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||||||||||||||||||| | ||| ||||||||| | |||||||||||| | |||||||| || |
|
|
| T |
37703553 |
agtatcttagaggagagctccagttggattttggaagttgaccactaaggttataattgaatgacaaatccaatctttgaagattaggtaaagagaggat |
37703652 |
T |
|
| Q |
631 |
gtcacttaacaaatttccttgcaaaccagtgtttgctagatgaagagaaaccaaagaggatgacaaattgtttagcattgacaaagagctctc |
723 |
Q |
| |
|
||||||| |||||||||||||||| |||| | || |||| ||||||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
37703653 |
gtcacttgacaaatttccttgcaactcagtttctgatagactaagagaaaccaaagaggatgacaaattctttagcattgacaatgagctctc |
37703745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 401; E-Value: 0
Query Start/End: Original strand, 31 - 723
Target Start/End: Original strand, 37594709 - 37595401
Alignment:
| Q |
31 |
taacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtgatttca |
130 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
37594709 |
taacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttatccctcaaacccacatagctcaattttgaacgttttgtgatttca |
37594808 |
T |
|
| Q |
131 |
attggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagactgttag |
230 |
Q |
| |
|
||||||||||| ||||| ||||||||| |||||||| |||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
37594809 |
attggaattggcccaactagtttgttatatgataaacctaaaatagaaaggtgaggtagatgaaaaagtgatgatggaacttggcctgttaggttgttaa |
37594908 |
T |
|
| Q |
231 |
aggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatgaggtgttt |
330 |
Q |
| |
|
||||||||| || |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
37594909 |
aggaaagtgctaaatattccaatttgattaaatttccataaacaattgggatgctaccgctaaagttattatctgtaagatcataatgaatgaggtgttt |
37595008 |
T |
|
| Q |
331 |
gaggtttgaaagtaatggtgagatctcaccgttaagtttattatttgaaagatccaaatatgttagttgagtgaggttccacaaagatagaggaaccatc |
430 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| ||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
37595009 |
gaggtttgaaagtaatggtgagatctcaccgtcaagcttattatatgaaagactcaaatatgttagttgggtgaggttccacaaagatagaggaaccatc |
37595108 |
T |
|
| Q |
431 |
ccatcaaaattgcaaaatgaaaggactaaatgagtaagagactttaattgacctatggaataggagatttctcctgagaaagcagtatgagagaggtaca |
530 |
Q |
| |
|
||||| |||| ||| |||||| |||| |||||||| |||| ||||||||||||||||| | ||||| ||||| ||||||| | ||||| || |
|
|
| T |
37595109 |
ccatctaaatggcaccatgaaaaatctaatcgagtaagatacttcaattgacctatggaataaggaatttcacctgaaaaagcagataaacggaggttca |
37595208 |
T |
|
| Q |
531 |
agtaccttagaggagtgctccagttggattttggaagttgaccactaaggtcttgattatgtgacaaatctagtctttgaagatttgacaaagagagtat |
630 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||| ||||||||| | |||||||||||| | |||||||| || |
|
|
| T |
37595209 |
agtaccttagaggagtgctcaagttggactttggaagttgaccactaaggttatcattaaatgacaaatccaatctttgaagattaggtaaagagaggat |
37595308 |
T |
|
| Q |
631 |
gtcacttaacaaatttccttgcaaaccagtgtttgctagatgaagagaaaccaaagaggatgacaaattgtttagcattgacaaagagctctc |
723 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||| |||| |||||||||||||||||||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
37595309 |
gtcacttgacaaatttccttgcaacccagtgtttcgtagaagaagagaaaccaaagaggatgaaaaattctttagcatggacaaagagctctc |
37595401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 24 - 755
Target Start/End: Original strand, 37436085 - 37436816
Alignment:
| Q |
24 |
acaactttaacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaa-acccacatagctcaattttgaagtttttg |
122 |
Q |
| |
|
|||||| |||||| ||||||||| |||||||||| | |||||||||||||||||||||||| | | || | ||||||||||||||||||| || ||||| |
|
|
| T |
37436085 |
acaactctaacaatgaaggcaaataataacaccactgtggaattgttccatttaacatgttat-attctagacccacatagctcaattttaaacgttttg |
37436183 |
T |
|
| Q |
123 |
tgatttcaattggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttag |
222 |
Q |
| |
|
| ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37436184 |
taatttcaattggaattgggccaactagtttgttaaatgataaatctaaatgagaaaggtggggtagatgaaaaagtgatgatggaacttggcctgttag |
37436283 |
T |
|
| Q |
223 |
actgttagaggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatg |
322 |
Q |
| |
|
||||| ||||||||||||| |||||| |||||| |||||||| ||||||| |||| |||||||||||||||||||||| | |||| ||||||| |||| |
|
|
| T |
37436284 |
gctgttggaggaaagtgataaatattccaatttggttaaattttgataaacatttggaatgctaccgctaaagttattatatccaaggtcacaataaatg |
37436383 |
T |
|
| Q |
323 |
aggtgtttgaggtttgaaagtaatggtgagatctcaccgttaagtttattatttgaaagatccaaatatgttagttgagtgaggttccacaaagatagag |
422 |
Q |
| |
|
|||||| | ||||||||||||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37436384 |
aggtgtgaggggtttgaaagtaatggtgaaatctcactgttaagtttatttcttgaaaggtccaaatatgttagttgagtgaggttccacaaagatagag |
37436483 |
T |
|
| Q |
423 |
gaaccatcccatcaaaattgcaaaatgaaaggactaaatgagtaagagactttaattgacctatggaataggagatttctcctgagaaagcagtatgaga |
522 |
Q |
| |
|
||||||||||||||||||||||| | ||||| |||| |||||||||||||| ||||||||||||||||| | ||||| ||||||||||||| | |
|
|
| T |
37436484 |
gaaccatcccatcaaaattgcaacctaaaaggtctaattgagtaagagacttcaattgacctatggaataaggaatttcacctgagaaagcagataaacg |
37436583 |
T |
|
| Q |
523 |
gaggtacaagtaccttagaggagtgctccagttggattttggaagttgaccactaaggtcttgattatgtgacaaatctagtctttgaagatttgacaaa |
622 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||| | |||||||||||| | ||| |
|
|
| T |
37436584 |
gaggttcaagtaccttagaggagtgctccagttggactttggaagttgaccactaaggttttgattaaatgacaaatccaatctttgaagattaggtaaa |
37436683 |
T |
|
| Q |
623 |
gagagtatgtcacttaacaaatttccttgcaaaccagtgtttgctagatgaagagaaaccaaagaggatgacaaattgtttagcattgacaaagagctct |
722 |
Q |
| |
|
||||| ||||||||| |||||||||||||||| |||| ||||||| ||||||||||||||| ||||||||||| ||| || ||||||||||||| |
|
|
| T |
37436684 |
gagaggatgtcacttgacaaatttccttgcaactgagtggatgctagactaagagaaaccaaagaagatgacaaattcgttaacaacgacaaagagctct |
37436783 |
T |
|
| Q |
723 |
ctccgattgaagacatgttcactccatttagat |
755 |
Q |
| |
|
|||| ||||||||||| ||||||||||| |||| |
|
|
| T |
37436784 |
ctccaattgaagacattttcactccattcagat |
37436816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 279 - 725
Target Start/End: Complemental strand, 37392485 - 37392042
Alignment:
| Q |
279 |
ggatgctaccgctaaagttattatctgcaagatcacaatgaatgaggtgtttgaggtttgaaagtaatggtgagatctcaccgttaagtttattatttga |
378 |
Q |
| |
|
||||| |||||||||||| ||||| | ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| | ||| |
|
|
| T |
37392485 |
ggatgttaccgctaaagtaattatatccaagatcacaatgaatgaggtgtttgaggttcaaaaataatggtgagatctcaccgttaagtttattttgtga |
37392386 |
T |
|
| Q |
379 |
aagatccaaatatgttagttgagtgaggttccacaaagatagaggaaccatcccatcaaaattgcaaaatgaaaggactaaatgagtaagagactttaat |
478 |
Q |
| |
|
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||| |||| || |
|
|
| T |
37392385 |
aaggtccaaatgtgttagttgagtgaggttccacaaagatagaggaaccatcccatctaaattgcaatatgaaaggactaattgagtaagatacttcaaa |
37392286 |
T |
|
| Q |
479 |
tgacctatggaataggagatttctcctgagaaagcagtatgagagaggtacaagtaccttagaggagtgctccagttggattttggaagttgaccactaa |
578 |
Q |
| |
|
|| ||||| || | || ||||| |||||||||| | ||| |||| ||||||||||||||||||||||||||| ||||||||||||| ||| |||| |
|
|
| T |
37392285 |
tggcctatagatttgggaatttcacctgagaaagtgatgccagataggtccaagtaccttagaggagtgctccagtttgattttggaagtttaccgctaa |
37392186 |
T |
|
| Q |
579 |
ggtcttgattatgtgacaaatctagtctttgaagatttgacaaagagagtatgtcacttaacaaatttccttgcaaaccagtgtttgctagatgaagaga |
678 |
Q |
| |
|
| || ||||| |||||||||||||||||||||||| | |||||||| ||| ||||| |||||||||||||||| ||| | | | |||| |||||| |
|
|
| T |
37392185 |
g---ttcattatttgacaaatctagtctttgaagattaggtaaagagaggatggcacttgacaaatttccttgcaacccaatttctcctagcctaagaga |
37392089 |
T |
|
| Q |
679 |
aaccaaagaggatgacaaattgtttagcattgacaaagagctctctc |
725 |
Q |
| |
|
||||||||||||||||| ||| |||||||| |||||||||||||||| |
|
|
| T |
37392088 |
aaccaaagaggatgacacattctttagcatagacaaagagctctctc |
37392042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 107 - 744
Target Start/End: Complemental strand, 37382034 - 37381397
Alignment:
| Q |
107 |
aattttgaagtttttgtgatttcaattggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatg |
206 |
Q |
| |
|
||||||||| ||| ||||||||| ||||||| || || || | ||| ||| || ||||| || || |||||| | || |||| ||| |||||||||| |
|
|
| T |
37382034 |
aattttgaatgtttagtgatttcagttggaataggacctactaatttattatttgttaaatctagatgagaaagctcagtcagattaaacagtgatgatg |
37381935 |
T |
|
| Q |
207 |
gaacttggcctgttagactgttagaggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattat-ctg |
305 |
Q |
| |
|
||||| |||| ||||| | ||| ||| | | || ||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
37381934 |
gaactaggccacttagattattaccggagaatcctaaatattctaatttgattaaattttcaaaaacatttgggatgctaccgctaaagttattatactg |
37381835 |
T |
|
| Q |
306 |
caagatcacaatgaatgaggtgtttgaggtttgaaagtaatggtgagatctcaccgttaagtttatta-tttgaaagatccaaatatgttagttgagtga |
404 |
Q |
| |
|
||||||| | | | |||||||| | || ||||||||| ||| || ||||||||| ||||| || || ||||||||| | || |||| |||||||||| |
|
|
| T |
37381834 |
-aagatcaaagtaagtgaggtgtgtaagttttgaaagtgatgatgggatctcacctttaagattgttgctttgaaagaac-aaggatgtgagttgagtga |
37381737 |
T |
|
| Q |
405 |
ggttccacaaagatagaggaaccatcccatcaaaattgcaaaatgaaaggactaaatgagtaagagactttaattgacctatggaataggagatttctcc |
504 |
Q |
| |
|
|||||| ||||||| |||||| || ||| ||||||||||| | | |||| |||| ||||| |||||||| || || ||||||||||| | ||||| || |
|
|
| T |
37381736 |
ggttccccaaagatggaggaatcaacccgtcaaaattgcacatttcaaggtctaattgagttagagacttcaactggcctatggaataaggaatttcacc |
37381637 |
T |
|
| Q |
505 |
tgagaaagcagtatgagagaggtacaagtaccttagaggagtgctccagttggattttggaagttgaccactaaggtcttgattatgtgacaaatctagt |
604 |
Q |
| |
|
|||||||| || ||||||||| ||||||||| | ||||||||||||||||||||| |||||||||| || || | || |||| ||| ||||||||| |
|
|
| T |
37381636 |
tgagaaaggggtgcgagagaggtccaagtacctcaaaggagtgctccagttggatttcggaagttgactgctcagatatttattagatgataaatctagt |
37381537 |
T |
|
| Q |
605 |
ctttgaagatttgacaaagagagtatgtcacttaacaaatttccttgcaaaccagtgtttgctagatgaagagaaaccaaagaggatgacaaattgttta |
704 |
Q |
| |
|
|||| ||||| | |||||||| ||||||||| |||||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
37381536 |
gtttggagattaggtaaagagaggatgtcacttgacaaatttccttgcaacccagtttctcctagaccaagagaaaccaaagaggatgacaaattcttta |
37381437 |
T |
|
| Q |
705 |
gcattgacaaagagctctctccgattgaagacatgttcac |
744 |
Q |
| |
|
|||| || ||||||||| ||| || || ||||||||||| |
|
|
| T |
37381436 |
gcatagataaagagctcgctctaatagaggacatgttcac |
37381397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 391 - 735
Target Start/End: Original strand, 37429486 - 37429834
Alignment:
| Q |
391 |
tgttagttgagtgaggttccacaaagatagaggaaccatcccatcaaaattgcaaaatgaaaggactaaatgagtaagagactttaattgacctatggaa |
490 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | ||| ||||| || ||||||| ||||||| |||||| |||| || | ||||||||| |
|
|
| T |
37429486 |
tgttagttgagtgaggttccacaaagatagaggaagaacagcatagaaattacagtttgaaaggcctaaatgtgtaagatacttcaaattgcctatggaa |
37429585 |
T |
|
| Q |
491 |
taggagatttctcctgagaaagcagtatgagagaggtacaagtaccttagaggagtgctccagttggattttggaagttgaccactaaggtcttgattat |
590 |
Q |
| |
|
|||| ||||| | ||||| || || | ||||||| |||||||||||| ||||||||||||||||| |||||||| ||||||||||| | |||| |
|
|
| T |
37429586 |
tagggaatttcatccgagaaggcggtgtatgagaggtccaagtaccttaggggagtgctccagttggacagtggaagtttcccactaaggtcctcattaa |
37429685 |
T |
|
| Q |
591 |
gtgacaaatctagtctttgaagatttgacaaagagagtatgtca----cttaacaaatttccttgcaaaccagtgtttgctagatgaagagaaaccaaag |
686 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||| |||||| ||| |||||| ||||||| |||||| ||| ||||| ||||| ||||||| |
|
|
| T |
37429686 |
aagacaaatctagttcttgaagatttggtaaagagaggatgtcactagcttggaaaattttcttgcaagccagtgattgatagatcaagagcgaccaaag |
37429785 |
T |
|
| Q |
687 |
aggatgacaaattgtttagcattgacaaagagctctctccgattgaaga |
735 |
Q |
| |
|
|||| || ||||| |||||| |||||||| ||||||| |||| |||| |
|
|
| T |
37429786 |
aggacgataaattccttagcagcgacaaagatctctctctgattaaaga |
37429834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 38 - 214
Target Start/End: Complemental strand, 37392660 - 37392484
Alignment:
| Q |
38 |
gaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtgatttcaattggaa |
137 |
Q |
| |
|
|||||||||||||||||||| | |||||||| ||||| |||||||| || ||| |||| |||||||||||| ||||||||||| || ||||| |
|
|
| T |
37392660 |
gaaggcaaagaataacaccactgcggaattgtaccattaaacatgttagaacctaaattcacaatgctcaattttgagcgttttgtgatttgaactggaa |
37392561 |
T |
|
| Q |
138 |
ttgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttgg |
214 |
Q |
| |
|
|||||||||| ||||||||| ||||||||| |||| |||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
37392560 |
ttgggccaactagtttgttagatgataaatctaaaaaagaaaggttgggtagatgaaaaagtgatgatggaacttgg |
37392484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 335 - 569
Target Start/End: Complemental strand, 37412747 - 37412513
Alignment:
| Q |
335 |
tttgaaagtaatggtgagatctcaccgttaagtttattatttgaaagatccaaatatgttagttgagtgaggttccacaaagatagaggaaccatcccat |
434 |
Q |
| |
|
||||||||||||| || ||| |||||||||||||| ||| |||||| ||||||| ||||||||||||||||||||| |||||| |||||| || |||| |
|
|
| T |
37412747 |
tttgaaagtaatgatgggatttcaccgttaagtttgttaaatgaaaggtccaaatgtgttagttgagtgaggttccataaagattgaggaatcaatccat |
37412648 |
T |
|
| Q |
435 |
caaaattgcaaaatgaaaggactaaatgagtaagagactttaattgacctatggaataggagatttctcctgagaaagcagtatgagagaggtacaagta |
534 |
Q |
| |
|
|||| || | ||| ||| || | |||||||| || |||||||||||||| | ||||| ||||||||| ||| |||||| | |||||| |
|
|
| T |
37412647 |
gcaaatcacatgctttaagcgataactggttgagagacttcaactgacctatggaataaggaatttcacctgagaaaaaagttaaagagagatccaagta |
37412548 |
T |
|
| Q |
535 |
ccttagaggagtgctccagttggattttggaagtt |
569 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||| |
|
|
| T |
37412547 |
ccttagaggagtgctccagttgaacattggaagtt |
37412513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 620 - 738
Target Start/End: Complemental strand, 37412500 - 37412382
Alignment:
| Q |
620 |
aaagagagtatgtcacttaacaaatttccttgcaaaccagtgtttgctagatgaagagaaaccaaagaggatgacaaattgtttagcattgacaaagagc |
719 |
Q |
| |
|
|||||| | ||||||||| |||||||||||||||| |||||| ||||| |||||| |||| ||||||||||||||| ||||||| |||||||| |
|
|
| T |
37412500 |
aaagagggaatgtcacttgctaaatttccttgcaaactagtgttccctagactaagagagaccagagaggatgacaaattctttagcagcgacaaagaat |
37412401 |
T |
|
| Q |
720 |
tctctccgattgaagacat |
738 |
Q |
| |
|
|||||| ||| |||||||| |
|
|
| T |
37412400 |
tctctctgatggaagacat |
37412382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 37429208 - 37429308
Alignment:
| Q |
122 |
gtgatttcaattggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgtta |
221 |
Q |
| |
|
||||||| ||| |||||||||||| | | ||| ||||| ||||||| ||| |||||| | || ||||||||| | ||||||||||||||||||||||| |
|
|
| T |
37429208 |
gtgatttgaatcggaattgggccatctaatttattaaacgataaatctaacatagaaagctgagttagatgaaacaatgatgatggaacttggcctgtta |
37429307 |
T |
|
| Q |
222 |
g |
222 |
Q |
| |
|
| |
|
|
| T |
37429308 |
g |
37429308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 37343272 - 37343319
Alignment:
| Q |
37 |
cgaaggcaaagaataacaccaatttggaattgttccatttaacatgtt |
84 |
Q |
| |
|
||||||||||| | ||||||||||| ||||| |||||||||||||||| |
|
|
| T |
37343272 |
cgaaggcaaagtaaaacaccaatttagaatttttccatttaacatgtt |
37343319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 37429119 - 37429164
Alignment:
| Q |
33 |
acaacgaaggcaaagaataacaccaatttggaattgttccatttaa |
78 |
Q |
| |
|
||||||||||||| ||||||||||| | |||||||||||| ||||| |
|
|
| T |
37429119 |
acaacgaaggcaaggaataacaccagtgtggaattgttccgtttaa |
37429164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 243; Significance: 1e-134; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 376 - 758
Target Start/End: Original strand, 14553768 - 14554150
Alignment:
| Q |
376 |
tgaaagatccaaatatgttagttgagtgaggttccacaaagatagaggaaccatcccatcaaaattgcaaaatgaaaggactaaatgagtaagagacttt |
475 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14553768 |
tgaaaggtccaaatgtgttagttgagtgaggttccacaaagatagaggaaccatcccatctaaattgcaatctgaaaggactaaatgagtaagagacttc |
14553867 |
T |
|
| Q |
476 |
aattgacctatggaataggagatttctcctgagaaagcagtatgagagaggtacaagtaccttagaggagtgctccagttggattttggaagttgaccac |
575 |
Q |
| |
|
||||||||||||||||| | ||||| ||||||||||||| | | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
14553868 |
aattgacctatggaataaggaatttcacctgagaaagcagagtaatggaggtacaagtaccttagaggagtactccagttggattttggaagttgaccac |
14553967 |
T |
|
| Q |
576 |
taaggtcttgattatgtgacaaatctagtctttgaagatttgacaaagagagtatgtcacttaacaaatttccttgcaaaccagtgtttgctagatgaag |
675 |
Q |
| |
|
|||| | | |||| | |||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||| || |||||||||||| ||| |
|
|
| T |
14553968 |
taagaccatcattacctaccaaatctagtttttgaagatttggcaaagagagtatgtcacttgacaaatttccttgcaacccggtgtttgctagactaag |
14554067 |
T |
|
| Q |
676 |
agaaaccaaagaggatgacaaattgtttagcattgacaaagagctctctccgattgaagacatgttcactccatttagataaa |
758 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| |
|
|
| T |
14554068 |
agaaaccaaagaggatgacaaattctttagcattgacaaagagctctctctgatggaagacatgttcactccattcagataaa |
14554150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 20 - 300
Target Start/End: Original strand, 14553484 - 14553764
Alignment:
| Q |
20 |
agggacaactttaacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagttt |
119 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||| |||||||||||||||||||| || |
|
|
| T |
14553484 |
agggataactctaacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttataacttaaatccacatagctcaattttgaacgtt |
14553583 |
T |
|
| Q |
120 |
ttgtgatttcaattggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgt |
219 |
Q |
| |
|
||||||||||||||| ||| || ||||| ||||||||| |||||||| ||||| |||||| | |||||||| |||||||||||||||||||||||||| |
|
|
| T |
14553584 |
ttgtgatttcaattgcaatcggcccaactagtttgttagatgataaacataaaaaagaaagctgaggtagattaaaaagtgatgatggaacttggcctgc |
14553683 |
T |
|
| Q |
220 |
tagactgttagaggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttatt |
300 |
Q |
| |
|
||| |||||||| |||| ||| |||||| |||||| ||||||||||| ||||| ||||||||| | ||| |||||||| |
|
|
| T |
14553684 |
taggttgttagagaaaaggtataaatattccaatttgattaaatttccacaaacatctgggatgctccagcttaagttatt |
14553764 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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