View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18516_high_9 (Length: 247)
Name: NF18516_high_9
Description: NF18516
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18516_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 4 - 231
Target Start/End: Original strand, 2765885 - 2766112
Alignment:
| Q |
4 |
attagaatcagttggttagttaggagtagatacgggtcagttactttattagttactgcacccttactctacaaataggattattgtgtacacactgaac |
103 |
Q |
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| T |
2765885 |
attagaatcagttggttagttaggagtagatacgggtcagttactttattagttagtgcacccttactctacaagtaggattattgtgtacacaccgaac |
2765984 |
T |
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| Q |
104 |
catactatattttaccaatcaagatgttttttaacgagcatttacctcatgaacttaactatgttctctttctctcacatgtgtatgatatctgacacta |
203 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2765985 |
catactatcttttaccaatcaagatgttttttaacgagcatttacctcatgaacttaactatgttctctttctctcacatgtgtatgatatctgacacta |
2766084 |
T |
|
| Q |
204 |
cgatcccattattttcacatatgattca |
231 |
Q |
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|||||||||| ||||||||||||||||| |
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| T |
2766085 |
cgatcccattgttttcacatatgattca |
2766112 |
T |
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