View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1851_high_24 (Length: 236)
Name: NF1851_high_24
Description: NF1851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1851_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 9049479 - 9049700
Alignment:
| Q |
1 |
tcaacattcaattttaaacctagctagggttcataacattgttacttagttgtgagaaggaggatgtgtcttaggtggtgaataatccaaattaaaccca |
100 |
Q |
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| T |
9049479 |
tcaacatataattttaaacctagctagggttcataacattgttacttagttgtgagaaggaggatgtgtcttaggtggtgaataatccaaattaaaacca |
9049578 |
T |
|
| Q |
101 |
ggatgtttctcactatgcttcttcttattgtgaggtacacgcaatgatgaaactgaaacatgagatttagtttgcaattcagctgaaacttttctcatat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9049579 |
ggatgtttctcactatgcttcttcttattgtgaggtacacgcaatgatgaaactgaaacatgagatttagtttgcaattcagctgaaacttttctcatat |
9049678 |
T |
|
| Q |
201 |
ctttcagtactttttggttagt |
222 |
Q |
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|||||| |||||||||||||| |
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| T |
9049679 |
ctttcaacactttttggttagt |
9049700 |
T |
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