View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1851_low_20 (Length: 249)

Name: NF1851_low_20
Description: NF1851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1851_low_20
NF1851_low_20
[»] chr4 (60 HSPs)
chr4 (1-239)||(46013304-46013542)
chr4 (1-239)||(46247046-46247284)
chr4 (68-238)||(46019621-46019801)
chr4 (7-70)||(46019834-46019897)
chr4 (104-178)||(54325102-54325176)
chr4 (105-180)||(17884000-17884075)
chr4 (119-180)||(10192230-10192291)
chr4 (112-177)||(30338658-30338723)
chr4 (105-158)||(51044544-51044597)
chr4 (104-180)||(4071814-4071889)
chr4 (114-178)||(21953214-21953278)
chr4 (104-180)||(24929424-24929500)
chr4 (104-180)||(42321942-42322018)
chr4 (133-177)||(43372035-43372079)
chr4 (112-176)||(52735061-52735125)
chr4 (133-180)||(2996533-2996580)
chr4 (114-177)||(18628609-18628672)
chr4 (137-172)||(19429559-19429594)
chr4 (134-173)||(56007647-56007686)
chr4 (119-165)||(3662294-3662340)
chr4 (112-170)||(50745939-50745997)
chr4 (107-176)||(2883935-2884004)
chr4 (142-239)||(21952930-21953027)
chr4 (133-178)||(27623595-27623640)
chr4 (121-177)||(927424-927480)
chr4 (104-163)||(4191670-4191730)
chr4 (105-177)||(21593078-21593149)
chr4 (101-161)||(21952503-21952563)
chr4 (124-180)||(25434523-25434579)
chr4 (134-182)||(29194464-29194512)
chr4 (107-171)||(32724053-32724117)
chr4 (110-166)||(52645826-52645882)
chr4 (104-163)||(20907104-20907163)
chr4 (105-152)||(21683570-21683617)
chr4 (137-180)||(22471295-22471338)
chr4 (139-178)||(31038932-31038971)
chr4 (104-171)||(44319881-44319947)
chr4 (104-163)||(47970249-47970308)
chr4 (133-180)||(49085949-49085996)
chr4 (133-180)||(55870404-55870451)
chr4 (138-180)||(13949907-13949949)
chr4 (106-180)||(28581973-28582046)
chr4 (104-170)||(36734824-36734890)
chr4 (133-171)||(54327521-54327559)
chr4 (119-180)||(18630626-18630687)
chr4 (122-163)||(20936082-20936123)
chr4 (124-177)||(30024651-30024704)
chr4 (133-166)||(30743325-30743358)
chr4 (124-173)||(32764892-32764941)
chr4 (100-161)||(39438618-39438679)
chr4 (115-164)||(52926170-52926219)
chr4 (133-178)||(53626736-53626781)
chr4 (124-180)||(11917510-11917566)
chr4 (119-163)||(22662327-22662371)
chr4 (119-163)||(22666806-22666850)
chr4 (180-232)||(28300297-28300349)
chr4 (124-164)||(31642073-31642113)
chr4 (104-175)||(41088315-41088384)
chr4 (106-178)||(41606119-41606191)
chr4 (124-180)||(49219090-49219146)
[»] chr7 (56 HSPs)
chr7 (74-182)||(49060441-49060549)
chr7 (136-180)||(31338471-31338515)
chr7 (112-174)||(45593788-45593850)
chr7 (81-182)||(27481355-27481456)
chr7 (123-179)||(30456514-30456570)
chr7 (104-168)||(47004018-47004082)
chr7 (104-163)||(30496635-30496694)
chr7 (112-175)||(31341133-31341196)
chr7 (110-180)||(1417201-1417271)
chr7 (112-178)||(35536046-35536112)
chr7 (135-173)||(46531495-46531533)
chr7 (104-168)||(2223079-2223143)
chr7 (104-180)||(3610803-3610879)
chr7 (133-177)||(5006575-5006619)
chr7 (105-180)||(5373157-5373232)
chr7 (107-177)||(23918891-23918961)
chr7 (114-180)||(28340459-28340525)
chr7 (100-178)||(31002688-31002766)
chr7 (105-171)||(33894555-33894620)
chr7 (101-178)||(2894745-2894822)
chr7 (133-178)||(29363478-29363523)
chr7 (124-173)||(39591537-39591586)
chr7 (141-173)||(819830-819862)
chr7 (121-180)||(2999139-2999199)
chr7 (133-173)||(7243604-7243644)
chr7 (104-180)||(25511558-25511634)
chr7 (112-180)||(28613597-28613665)
chr7 (106-158)||(35808989-35809041)
chr7 (112-159)||(2176848-2176895)
chr7 (104-163)||(7244633-7244692)
chr7 (133-180)||(9527153-9527200)
chr7 (102-169)||(10079414-10079481)
chr7 (123-178)||(12835002-12835057)
chr7 (120-182)||(15075146-15075209)
chr7 (104-171)||(24975835-24975902)
chr7 (104-155)||(30133980-30134031)
chr7 (133-180)||(45777234-45777281)
chr7 (109-171)||(5272892-5272954)
chr7 (133-171)||(18749882-18749920)
chr7 (112-178)||(27492734-27492800)
chr7 (104-170)||(27626197-27626263)
chr7 (107-168)||(2727435-2727496)
chr7 (133-170)||(17989096-17989133)
chr7 (141-178)||(21076992-21077029)
chr7 (143-180)||(29768989-29769026)
chr7 (104-177)||(39551614-39551687)
chr7 (104-180)||(46081964-46082041)
chr7 (136-180)||(946715-946759)
chr7 (103-163)||(1423076-1423136)
chr7 (97-149)||(4591466-4591518)
chr7 (124-180)||(5010531-5010587)
chr7 (134-178)||(12234952-12234996)
chr7 (104-164)||(24967015-24967074)
chr7 (133-177)||(28165051-28165095)
chr7 (135-163)||(30160970-30160998)
chr7 (74-162)||(39505858-39505946)
[»] chr3 (58 HSPs)
chr3 (133-180)||(31337464-31337511)
chr3 (133-187)||(26599138-26599192)
chr3 (99-180)||(36139804-36139885)
chr3 (104-169)||(38462212-38462277)
chr3 (106-179)||(43116492-43116565)
chr3 (136-180)||(1816546-1816590)
chr3 (123-171)||(49586988-49587036)
chr3 (134-236)||(42745007-42745114)
chr3 (112-178)||(33307517-33307583)
chr3 (105-170)||(20192679-20192744)
chr3 (99-180)||(42039085-42039165)
chr3 (104-180)||(12923388-12923464)
chr3 (182-238)||(25925764-25925820)
chr3 (134-178)||(34234844-34234888)
chr3 (112-180)||(40122816-40122883)
chr3 (104-156)||(44389078-44389130)
chr3 (136-180)||(48397609-48397653)
chr3 (104-163)||(2128331-2128390)
chr3 (133-172)||(22232786-22232825)
chr3 (104-171)||(27792803-27792870)
chr3 (133-180)||(28306118-28306165)
chr3 (133-180)||(31713949-31713995)
chr3 (104-170)||(36783407-36783474)
chr3 (104-163)||(41028931-41028990)
chr3 (104-163)||(44374724-44374783)
chr3 (108-167)||(48872277-48872336)
chr3 (133-167)||(659899-659933)
chr3 (113-171)||(1395611-1395669)
chr3 (105-163)||(3757980-3758038)
chr3 (102-180)||(36101497-36101575)
chr3 (133-171)||(42808939-42808977)
chr3 (111-177)||(47584412-47584478)
chr3 (124-170)||(54775079-54775125)
chr3 (69-170)||(2070951-2071052)
chr3 (137-178)||(2201092-2201133)
chr3 (183-236)||(3044253-3044306)
chr3 (112-177)||(8007761-8007826)
chr3 (105-178)||(24605081-24605154)
chr3 (104-177)||(32703069-32703142)
chr3 (104-173)||(33307650-33307719)
chr3 (133-170)||(33965564-33965601)
chr3 (123-164)||(34254888-34254929)
chr3 (121-170)||(34954031-34954080)
chr3 (135-180)||(35364254-35364299)
chr3 (114-175)||(51278225-51278286)
chr3 (124-173)||(53736183-53736232)
chr3 (136-176)||(3182429-3182469)
chr3 (124-180)||(10101539-10101595)
chr3 (124-180)||(10212464-10212520)
chr3 (104-164)||(22667356-22667416)
chr3 (104-164)||(22723995-22724055)
chr3 (144-180)||(23249529-23249565)
chr3 (124-180)||(24235746-24235802)
chr3 (123-171)||(24887355-24887403)
chr3 (114-178)||(33882969-33883033)
chr3 (119-163)||(34958274-34958318)
chr3 (136-180)||(47131953-47131997)
chr3 (174-234)||(52440658-52440718)
[»] chr5 (40 HSPs)
chr5 (82-180)||(19177388-19177486)
chr5 (104-180)||(35135725-35135801)
chr5 (112-178)||(28586831-28586897)
chr5 (112-173)||(37063144-37063205)
chr5 (104-180)||(36539677-36539753)
chr5 (123-178)||(14295456-14295511)
chr5 (133-177)||(39750103-39750147)
chr5 (133-180)||(583836-583883)
chr5 (112-179)||(12407725-12407792)
chr5 (112-180)||(14599366-14599436)
chr5 (137-180)||(41277413-41277456)
chr5 (100-162)||(21782650-21782712)
chr5 (104-162)||(35095864-35095922)
chr5 (75-169)||(35963150-35963244)
chr5 (81-170)||(20982208-20982297)
chr5 (136-180)||(2933714-2933758)
chr5 (119-163)||(10303747-10303791)
chr5 (174-234)||(13604845-13604905)
chr5 (138-178)||(32059654-32059694)
chr5 (106-157)||(7096213-7096264)
chr5 (104-171)||(9202820-9202887)
chr5 (104-163)||(11835208-11835267)
chr5 (124-163)||(29117010-29117049)
chr5 (133-163)||(985593-985623)
chr5 (174-236)||(10125712-10125774)
chr5 (112-178)||(16889674-16889740)
chr5 (180-234)||(17258879-17258933)
chr5 (112-178)||(32172592-32172658)
chr5 (133-171)||(32969189-32969227)
chr5 (104-158)||(35960345-35960399)
chr5 (141-178)||(33234329-33234366)
chr5 (123-180)||(38831519-38831576)
chr5 (74-170)||(6733966-6734061)
chr5 (124-180)||(9703303-9703359)
chr5 (124-180)||(18704099-18704154)
chr5 (174-234)||(21768193-21768253)
chr5 (74-150)||(26516199-26516275)
chr5 (133-177)||(26516360-26516404)
chr5 (104-180)||(31694449-31694525)
chr5 (133-177)||(40159779-40159823)
[»] chr8 (36 HSPs)
chr8 (133-233)||(11000573-11000671)
chr8 (74-160)||(39392744-39392830)
chr8 (104-164)||(14482133-14482193)
chr8 (133-175)||(8066909-8066951)
chr8 (133-234)||(20672732-20672824)
chr8 (106-174)||(29056060-29056128)
chr8 (74-180)||(10727098-10727204)
chr8 (124-177)||(40728484-40728537)
chr8 (134-210)||(25872439-25872515)
chr8 (136-180)||(33912096-33912140)
chr8 (134-178)||(45071163-45071207)
chr8 (74-177)||(787172-787275)
chr8 (113-172)||(2605959-2606018)
chr8 (105-180)||(34770824-34770899)
chr8 (104-163)||(35298558-35298617)
chr8 (133-163)||(10437845-10437875)
chr8 (124-178)||(29699205-29699259)
chr8 (104-170)||(35534934-35535000)
chr8 (105-178)||(4558730-4558803)
chr8 (74-163)||(6918259-6918348)
chr8 (133-178)||(7026691-7026736)
chr8 (133-178)||(7853366-7853411)
chr8 (124-165)||(11119077-11119118)
chr8 (104-177)||(11188221-11188294)
chr8 (104-161)||(26056016-26056073)
chr8 (133-166)||(38561686-38561719)
chr8 (121-170)||(42215379-42215428)
chr8 (138-178)||(2482830-2482870)
chr8 (104-180)||(3945205-3945281)
chr8 (138-178)||(6509368-6509408)
chr8 (140-180)||(6864522-6864562)
chr8 (134-178)||(11795053-11795097)
chr8 (137-169)||(26479743-26479775)
chr8 (137-177)||(34788493-34788533)
chr8 (133-177)||(42237488-42237532)
chr8 (112-180)||(42597340-42597408)
[»] chr6 (51 HSPs)
chr6 (104-173)||(8349734-8349803)
chr6 (133-220)||(5551422-5551510)
chr6 (136-178)||(10154184-10154226)
chr6 (104-162)||(32975909-32975967)
chr6 (105-182)||(2514634-2514711)
chr6 (133-182)||(9326916-9326965)
chr6 (74-171)||(32386171-32386268)
chr6 (75-176)||(32386630-32386731)
chr6 (109-178)||(33500546-33500615)
chr6 (124-180)||(4006665-4006721)
chr6 (99-178)||(9027503-9027582)
chr6 (104-163)||(20671945-20672004)
chr6 (105-164)||(24774690-24774749)
chr6 (111-178)||(33787810-33787877)
chr6 (81-171)||(3217262-3217352)
chr6 (141-210)||(9833130-9833199)
chr6 (99-180)||(24836262-24836343)
chr6 (112-177)||(29274295-29274360)
chr6 (99-180)||(31420884-31420965)
chr6 (106-163)||(31672548-31672605)
chr6 (133-181)||(7479169-7479217)
chr6 (133-173)||(9582668-9582708)
chr6 (136-175)||(323774-323813)
chr6 (135-178)||(1497943-1497986)
chr6 (111-162)||(4420555-4420606)
chr6 (104-155)||(13360666-13360717)
chr6 (123-178)||(24782009-24782064)
chr6 (123-177)||(1402946-1403000)
chr6 (124-170)||(5328925-5328971)
chr6 (184-238)||(6536971-6537025)
chr6 (133-171)||(7713985-7714023)
chr6 (135-177)||(7785808-7785850)
chr6 (104-170)||(27893978-27894044)
chr6 (89-159)||(33911365-33911435)
chr6 (133-178)||(281913-281958)
chr6 (133-170)||(2027479-2027516)
chr6 (114-171)||(7354145-7354202)
chr6 (109-177)||(22691586-22691652)
chr6 (133-178)||(22742326-22742371)
chr6 (133-162)||(27857335-27857364)
chr6 (123-160)||(30865432-30865469)
chr6 (107-171)||(507154-507218)
chr6 (134-170)||(3181141-3181177)
chr6 (119-171)||(3204614-3204666)
chr6 (114-178)||(4247126-4247190)
chr6 (135-171)||(4420607-4420643)
chr6 (124-180)||(24670368-24670424)
chr6 (119-163)||(29269842-29269886)
chr6 (141-177)||(32848662-32848698)
chr6 (102-178)||(33068626-33068702)
chr6 (104-164)||(34405036-34405096)
[»] chr2 (55 HSPs)
chr2 (103-180)||(10143102-10143179)
chr2 (104-180)||(37053525-37053601)
chr2 (120-177)||(33192140-33192197)
chr2 (133-180)||(14666508-14666555)
chr2 (112-178)||(5133711-5133777)
chr2 (112-170)||(13866828-13866886)
chr2 (133-180)||(11513858-11513905)
chr2 (104-171)||(14209208-14209275)
chr2 (133-180)||(40145422-40145469)
chr2 (105-162)||(5045238-5045295)
chr2 (104-176)||(14277960-14278033)
chr2 (123-180)||(31740022-31740079)
chr2 (135-180)||(33942112-33942157)
chr2 (136-177)||(36863691-36863732)
chr2 (124-180)||(3673758-3673814)
chr2 (138-178)||(7103548-7103588)
chr2 (123-171)||(17952773-17952821)
chr2 (133-177)||(18962104-18962148)
chr2 (106-178)||(30537592-30537664)
chr2 (112-180)||(32694151-32694219)
chr2 (133-177)||(41851969-41852013)
chr2 (119-178)||(1742097-1742156)
chr2 (137-180)||(5043623-5043666)
chr2 (133-176)||(6546938-6546981)
chr2 (133-180)||(28803569-28803616)
chr2 (105-156)||(38239638-38239689)
chr2 (133-180)||(39929827-39929874)
chr2 (117-164)||(44438918-44438965)
chr2 (106-180)||(3423831-3423905)
chr2 (133-171)||(3458617-3458655)
chr2 (107-153)||(12215741-12215787)
chr2 (134-176)||(29429824-29429866)
chr2 (123-177)||(33944555-33944609)
chr2 (104-162)||(34054982-34055040)
chr2 (104-178)||(35329884-35329958)
chr2 (136-178)||(35539686-35539728)
chr2 (105-178)||(2416245-2416318)
chr2 (123-180)||(9878745-9878802)
chr2 (104-153)||(13864581-13864630)
chr2 (133-170)||(33256700-33256737)
chr2 (104-165)||(35713154-35713215)
chr2 (112-157)||(37033983-37034028)
chr2 (105-170)||(37474688-37474753)
chr2 (133-170)||(43299476-43299513)
chr2 (104-176)||(9478230-9478302)
chr2 (74-150)||(10190180-10190256)
chr2 (133-177)||(15370422-15370466)
chr2 (104-180)||(25609727-25609803)
chr2 (110-178)||(29430693-29430760)
chr2 (135-175)||(31228885-31228925)
chr2 (104-156)||(31461369-31461421)
chr2 (123-163)||(32098388-32098428)
chr2 (104-180)||(35755565-35755641)
chr2 (104-180)||(36114586-36114662)
chr2 (133-177)||(44439426-44439470)
[»] chr1 (61 HSPs)
chr1 (106-180)||(15360827-15360901)
chr1 (105-234)||(27140417-27140552)
chr1 (135-210)||(51190823-51190898)
chr1 (68-162)||(43029482-43029575)
chr1 (137-182)||(40833896-40833941)
chr1 (80-163)||(4338555-4338639)
chr1 (133-233)||(47877082-47877182)
chr1 (104-178)||(4548651-4548726)
chr1 (133-180)||(40943447-40943494)
chr1 (124-195)||(44936638-44936709)
chr1 (188-238)||(5276321-5276371)
chr1 (111-177)||(36151571-36151637)
chr1 (135-177)||(46980195-46980237)
chr1 (137-182)||(43420222-43420267)
chr1 (104-177)||(44032065-44032138)
chr1 (104-177)||(45999354-45999427)
chr1 (135-180)||(48064271-48064316)
chr1 (112-236)||(50998491-50998615)
chr1 (119-171)||(2522582-2522634)
chr1 (104-180)||(17269181-17269257)
chr1 (133-177)||(27738246-27738290)
chr1 (74-178)||(40304119-40304223)
chr1 (106-178)||(15361644-15361718)
chr1 (133-176)||(28788605-28788648)
chr1 (123-178)||(30259552-30259607)
chr1 (133-180)||(30371108-30371155)
chr1 (123-170)||(33527220-33527267)
chr1 (104-171)||(46499926-46499993)
chr1 (119-177)||(4276702-4276760)
chr1 (136-178)||(6262702-6262744)
chr1 (99-153)||(39348057-39348111)
chr1 (113-163)||(42351986-42352036)
chr1 (104-150)||(45769836-45769882)
chr1 (104-174)||(47002943-47003013)
chr1 (124-178)||(49517021-49517075)
chr1 (136-177)||(781185-781226)
chr1 (133-170)||(3062960-3062997)
chr1 (125-158)||(5083051-5083084)
chr1 (106-178)||(5160342-5160411)
chr1 (133-178)||(7274004-7274049)
chr1 (123-176)||(18420921-18420974)
chr1 (112-161)||(23895275-23895324)
chr1 (112-169)||(29266151-29266208)
chr1 (111-172)||(30815706-30815767)
chr1 (104-177)||(45107554-45107626)
chr1 (106-182)||(1730825-1730900)
chr1 (133-177)||(4363698-4363742)
chr1 (136-180)||(7218137-7218181)
chr1 (136-176)||(12477354-12477394)
chr1 (136-176)||(15488917-15488957)
chr1 (123-163)||(17631181-17631221)
chr1 (124-180)||(29007779-29007835)
chr1 (136-180)||(30257646-30257690)
chr1 (104-180)||(33186020-33186096)
chr1 (133-177)||(34179938-34179982)
chr1 (136-168)||(38219873-38219905)
chr1 (124-180)||(43333650-43333706)
chr1 (172-220)||(43954055-43954103)
chr1 (74-162)||(44236612-44236700)
chr1 (135-179)||(45990122-45990166)
chr1 (137-177)||(48830142-48830182)
[»] scaffold0590 (1 HSPs)
scaffold0590 (104-171)||(1146-1213)
[»] scaffold0275 (1 HSPs)
scaffold0275 (104-171)||(2762-2829)
[»] scaffold0053 (1 HSPs)
scaffold0053 (105-180)||(20111-20186)
[»] scaffold0024 (1 HSPs)
scaffold0024 (105-180)||(27508-27583)
[»] scaffold0654 (1 HSPs)
scaffold0654 (104-180)||(6700-6776)
[»] scaffold0014 (1 HSPs)
scaffold0014 (104-180)||(116619-116695)


Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 46013542 - 46013304
Alignment:
Q  1 aaggctcaagaagcacttcagagctctggtcttgatacccaaacagctgctaaggtttgcttaattcatttagttaagcacttatagtataagtgataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46013542 aaggctcaagaagcacttcagagctctggtcttgatacccaaacagctgctaaggtttgcttaattcatttagttaagcacttatagtataagtgataat 46013443  T
Q  101 taaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagttatcctgaagagcttaagaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46013442 taaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagttatcctgaagagcttaagaat 46013343  T
Q  201 ataagttgaagacaacttatcaacatgtcataagttctt 239  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  46013342 ataagttgaagacaacttatcaacatgccataagttctt 46013304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 46247046 - 46247284
Alignment:
Q  1 aaggctcaagaagcacttcagagctctggtcttgatacccaaacagctgctaaggtttgcttaattcatttagttaagcacttatagtataagtgataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  46247046 aaggctcaagaagcacttcagagctctggtcttgatacccaaacagctgctaaggtttgcttaattcatttagataagcacttatagtataagtgataat 46247145  T
Q  101 taaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagttatcctgaagagcttaagaat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46247146 taaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataaattataagttatcctgaagagcttaagaat 46247245  T
Q  201 ataagttgaagacaacttatcaacatgtcataagttctt 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  46247246 ataagttgaagacaacttatcaacatgtcataagttctt 46247284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 46019801 - 46019621
Alignment:
Q  68 atttagttaagcacttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttata 167  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||| |||||||||| ||||||||| |||||||||||||||    
T  46019801 atttagttaagcacttatagtataagcgataattatataagtgtttatgtgtaagctatttctagaacaaaagaaaaaataaagccaaactgtttttata 46019702  T
Q  168 ----taagtt------ataagttatcctgaagagcttaagaatataagttgaagacaacttatcaacatgtcataagttct 238  Q
        ||||||      ||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  46019701 caagtaagttgttttcataagttatcccgaagagcttatgaatataagttgaaaacaacttatcaacatgtcataagttct 46019621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 46019897 - 46019834
Alignment:
Q  7 caagaagcacttcagagctctggtcttgatacccaaacagctgctaaggtttgcttaattcatt 70  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||    
T  46019897 caagaagcacttcagagctttggtcttgatacacaaactgctgctaaggtttgcttaattcatt 46019834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 54325176 - 54325102
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||| || ||| ||||||||||||   |||||||||||||||||||||||||||||| ||||||| ||||||    
T  54325176 ataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctataag 54325102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 17884000 - 17884075
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||| | |||||||| ||||||||  |||||||||||||||||||| ||| ||||||| |||||||||| ||||    
T  17884000 taagtgctcatgtgtaagctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagtt 17884075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 10192230 - 10192291
Alignment:
Q  119 taaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||| |  ||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  10192230 taaactatttttataacaaaagatagaataaagtcaaattgttttcatataagttataagtt 10192291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 30338723 - 30338658
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||| ||||||||||||  ||||||||||| |||||||| |||||||||| ||||||| |||||    
T  30338723 ttatgtataaactatttctataacaaaagatagaataaagttaaactgttttcatataagctataa 30338658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 51044597 - 51044544
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaact 158  Q
    ||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||    
T  51044597 taagtgtttatgtataagctatttctataacaaaagataaaataaagtcaaact 51044544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 4071814 - 4071889
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||||| | ||| ||||||||  |||||||||||||||||||||||| | |||| ||||||| ||||||||    
T  4071814 ataagtgtttatatataa-ctatttctataacaaaagataaaataaagtcaaattattttcatataagctataagtt 4071889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 21953214 - 21953278
Alignment:
Q  114 atgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||| ||||||||||||  ||||||||  |||||||||||||||| |||||||||||| ||||||    
T  21953214 atgtataaactatttctataacaaaagggaaaataaagtcaaactctttttatataagctataag 21953278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 24929424 - 24929500
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||| ||||| ||| | ||||||||||  ||||||||||||||||||||| ||||||||| ||| ||| ||||||||    
T  24929424 ataattgtttttgtatgaactatttctataacaaaagataaaataaagtctaactgttttcataaaagctataagtt 24929500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 42322018 - 42321942
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||||||  ||| |||||| |  |||||| ||||||||||||||||| |||||| |||||| |||||||||    
T  42322018 ataagtgtttatgaataagctatttttataacaaatgataaaataaagtcaaattgttttcatataaattataagtt 42321942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 43372079 - 43372035
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||||||||||||| |||||||||||||||||||||| |||||    
T  43372079 aacaaaagataaaatacagtcaaactgtttttatataagctataa 43372035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 52735061 - 52735125
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttata 176  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||| |  ||| ||||||||||||    
T  52735061 ttatgcgtaagctatttctgtaacaaaagataaaataaagtcaaattactttcatataagttata 52735125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 2996533 - 2996580
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  2996533 aacataagataaaatacagtcaaattgtttttatataagttataagtt 2996580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 18628672 - 18628609
Alignment:
Q  114 atgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||| |||| |||||||  ||||||||  |||||| ||||||||||||||||||||||||||||    
T  18628672 atgtataaattatttctttaacaaaaggaaaaatatagtcaaactgtttttatataagttataa 18628609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 172
Target Start/End: Complemental strand, 19429594 - 19429559
Alignment:
Q  137 aaagataaaataaagtcaaactgtttttatataagt 172  Q
    ||||||||||||||||||||||||||||||||||||    
T  19429594 aaagataaaataaagtcaaactgtttttatataagt 19429559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 173
Target Start/End: Original strand, 56007647 - 56007686
Alignment:
Q  134 acaaaagataaaataaagtcaaactgtttttatataagtt 173  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  56007647 acaaaagaaaaaataaagtcaaactgtttttatataagtt 56007686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 3662294 - 3662340
Alignment:
Q  119 taaactatttctggaacaaaagataaaataaagtcaaactgttttta 165  Q
    ||||||||| ||  |||||||||||||||||||||||||||||||||    
T  3662294 taaactattcctataacaaaagataaaataaagtcaaactgttttta 3662340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 170
Target Start/End: Original strand, 50745939 - 50745997
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    |||||| ||| |||||| |  |||||||||||||||||| |||||||||||||||||||    
T  50745939 ttatgtctaagctatttttataacaaaagataaaataaaatcaaactgtttttatataa 50745997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 2884004 - 2883935
Alignment:
Q  107 agtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttata 176  Q
    |||| |||||| || ||||||||   ||||| ||||||||||||||||||| ||||||||||||| ||||    
T  2884004 agtgcttatgtatacactatttcgaaaacaacagataaaataaagtcaaacagtttttatataagctata 2883935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 21952930 - 21953027
Alignment:
Q  142 taaaataaagtcaaactgtttttatataagttataagttatcctgaagagcttaagaatataagttgaagacaacttatcaacatgtcataagttctt 239  Q
    ||||||||||||||| |||||| ||||||| |||||| ||||||  |||||||||| | ||||  | || |||  ||||  |||||||||||||||||    
T  21952930 taaaataaagtcaaattgttttcatataagctataagctatcctatagagcttaaggaaataaactaaaaacaggttatggacatgtcataagttctt 21953027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 27623595 - 27623640
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||||||||||||||||||||| |||| ||||||| ||||||    
T  27623595 aacaaaagataaaataaagtcaaactattttaatataagctataag 27623640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 927424 - 927480
Alignment:
Q  121 aactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||||||||   ||||||||| |||||||||||||||||||| ||||||| |||||    
T  927424 aactatttctaatacaaaagatgaaataaagtcaaactgttttcatataagctataa 927480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 4191670 - 4191730
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagat-aaaataaagtcaaactgtttt 163  Q
    ||||||| |||||| ||| ||||||||  |||||||||| |||||||||||||||||||||    
T  4191670 ataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaaactgtttt 4191730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 21593149 - 21593078
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||| |||||| ||||||||||||  ||| ||||||||||||||||| |||| |||| ||||||| |||||    
T  21593149 taagtgcttatgtataaactatttctataactaaagataaaataaagtc-aactattttcatataagctataa 21593078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 21952503 - 21952563
Alignment:
Q  101 taaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtt 161  Q
    ||||||||||||||||  ||| ||||||||  |||||||| |||||| |||||||||||||    
T  21952503 taaataagtgtttatgcataagctatttctataacaaaaggtaaaatcaagtcaaactgtt 21952563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 25434579 - 25434523
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||| || ||||||||||||||||||||  |||||| ||||||| ||||||||    
T  25434579 tatttctgtaagaaaagataaaataaagtcaatatgttttcatataagctataagtt 25434523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 29194512 - 29194464
Alignment:
Q  134 acaaaagataaaataaagtcaaactgtttttatataagttataagttat 182  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||| ||||    
T  29194512 acaaaagataaaataaaatcaaactattttcatataagttataacttat 29194464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 32724053 - 32724117
Alignment:
Q  107 agtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    |||| |||||| ||| ||||||||   ||||||||||||||||||||||||| |||| |||||||    
T  32724053 agtgcttatgtctaatctatttctattacaaaagataaaataaagtcaaactattttcatataag 32724117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 52645882 - 52645826
Alignment:
Q  110 gtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttat 166  Q
    |||||||| ||| ||||||||  ||||||||||||||| || |||||||||||||||    
T  52645882 gtttatgtataagctatttctataacaaaagataaaatcaattcaaactgtttttat 52645826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 20907104 - 20907163
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    |||||||||||||| ||| |||||| |  || ||||||||||||||||| ||||||||||    
T  20907104 ataagtgtttatgtataagctatttgtataagaaaagataaaataaagtgaaactgtttt 20907163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 152
Target Start/End: Complemental strand, 21683617 - 21683570
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagt 152  Q
    ||||||||||||| ||||||||||||  |||||||||||| |||||||    
T  21683617 taagtgtttatgtataaactatttctataacaaaagataagataaagt 21683570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 22471295 - 22471338
Alignment:
Q  137 aaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||||    
T  22471295 aaagataaattaaaggcaaactgttttcatataagttataagtt 22471338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 31038971 - 31038932
Alignment:
Q  139 agataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  31038971 agataaaataaagtcaaattgttttcatataagttataag 31038932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 44319881 - 44319947
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    ||||||| | |||| ||||||||||||  || |||||||||||||||||| ||||||||| |||||||    
T  44319881 ataagtgctcatgtataaactatttctataa-aaaagataaaataaagtcgaactgttttcatataag 44319947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 47970249 - 47970308
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    ||||||| |||||| ||| ||||||||  ||||||||||||||| |||||||||| ||||    
T  47970249 ataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaactatttt 47970308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 49085949 - 49085996
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||||||||||| |||||||| |||| ||| ||||||||||||    
T  49085949 aacaaaagataaaataatgtcaaactattttcatacaagttataagtt 49085996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 55870451 - 55870404
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||| |||||||||||||||||||| | ||||| ||||||||    
T  55870451 aacaaaagatcaaataaagtcaaactgttttcacataagctataagtt 55870404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 180
Target Start/End: Complemental strand, 13949949 - 13949907
Alignment:
Q  138 aagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||    
T  13949949 aagataaaataaagtcaaattgttttcatataagctataagtt 13949907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 28582046 - 28581973
Alignment:
Q  106 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||||| |||||||||| |  | |||||||||||||||||||||||| |||| | ||| ||||| ||||    
T  28582046 aagtgtttatgtataaactatttttt-agcaaaagataaaataaagtcaaactattttcagatatgttatgagtt 28581973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 36734824 - 36734890
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    ||||||| |||||| ||| || |||||  |||||||| ||||||||||||||||| |||| ||||||    
T  36734824 ataagtgcttatgtataatctctttctataacaaaaggtaaaataaagtcaaactattttcatataa 36734890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 54327559 - 54327521
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  54327559 aacaaaagataaaacaaagtcaaactgttttcatataag 54327521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 18630626 - 18630687
Alignment:
Q  119 taaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||||   |||||||||||||||||||||||   ||||| ||||||| ||||||||    
T  18630626 taaactatttcaataacaaaagataaaataaagtcaattggttttcatataagctataagtt 18630687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 20936123 - 20936082
Alignment:
Q  122 actatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    |||||||||  |||||||||||||||||||||||||| ||||    
T  20936123 actatttctataacaaaagataaaataaagtcaaactatttt 20936082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 30024651 - 30024704
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||||  |||||||||||||||||||| ||| |||||| ||||||| |||||    
T  30024651 tatttctataacaaaagataaaataaagtaaaattgttttcatataagctataa 30024704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 30743325 - 30743358
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttat 166  Q
    |||||||||||||||||||||||||||| |||||    
T  30743325 aacaaaagataaaataaagtcaaactgtctttat 30743358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 32764892 - 32764941
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagtt 173  Q
    |||||||  ||||||||| ||||||||| || ||||||||||||||||||    
T  32764892 tatttctataacaaaagaaaaaataaaggcagactgtttttatataagtt 32764941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 39438679 - 39438618
Alignment:
Q  100 ttaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtt 161  Q
    |||| |||||| | |||||||| ||||||||  |||| ||||||||||||||||||| ||||    
T  39438679 ttaattaagtgctcatgtgtaagctatttctataacataagataaaataaagtcaaattgtt 39438618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 52926170 - 52926219
Alignment:
Q  115 tgtgtaaactatttctggaacaaaagataaaataaagtcaaactgttttt 164  Q
    ||||| || |||||||  |||||||||||||||| |||||||||||||||    
T  52926170 tgtgtcaattatttctataacaaaagataaaatatagtcaaactgttttt 52926219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 53626736 - 53626781
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||||||||||||| ||||| |||||| ||||||| ||||||    
T  53626736 aacaaaagataaaataaattcaaaatgttttcatataagctataag 53626781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 11917510 - 11917566
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||| || |||||||||||||||||||||||| | |||| ||||||  ||||||||    
T  11917510 tatttttgtaacaaaagataaaataaagtcaaattattttcatataacctataagtt 11917566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 22662371 - 22662327
Alignment:
Q  119 taaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    |||||| |||||| |||| |||||||||||| |||||||||||||    
T  22662371 taaactttttctgtaacacaagataaaataaggtcaaactgtttt 22662327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 22666850 - 22666806
Alignment:
Q  119 taaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    |||||| |||||| |||| |||||||||||| |||||||||||||    
T  22666850 taaactttttctgtaacacaagataaaataaggtcaaactgtttt 22666806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 28300349 - 28300297
Alignment:
Q  180 tatcctgaagagcttaagaatataagttgaagacaacttatcaacatgtcata 232  Q
    |||| ||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  28300349 tatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 28300297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 31642073 - 31642113
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgttttt 164  Q
    |||||||| |||| |||||||||||||||||||||| ||||    
T  31642073 tatttctgtaacacaagataaaataaagtcaaactggtttt 31642113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 41088315 - 41088384
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttat 175  Q
    ||||||| |||||| ||||||||||    |||||||||||||||||||| ||| ||  ||||||||||||||    
T  41088315 ataagtgcttatgtataaactattttcacaacaaaagataaaataaagtaaaattg--tttatataagttat 41088384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 41606119 - 41606191
Alignment:
Q  106 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||||||||  |||||||||    |||||| |||||||||||||||||  ||| ||||||||| ||||||    
T  41606119 aagtgtttatgtaaaaactattttgataacaaaggataaaataaagtcaaatggttcttatataagctataag 41606191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 49219090 - 49219146
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||  ||||||| |||||||||||||||| | |||| ||||||| ||||||||    
T  49219090 tatttctataacaaaatataaaataaagtcaaattattttcatataagctataagtt 49219146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 182
Target Start/End: Original strand, 49060441 - 49060549
Alignment:
Q  74 ttaagcacttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagtt 173  Q
    |||||||||||||||||||  | | || | |||||| ||||||| ||| ||||||||  ||||||| |||||||||||||||| | |||||||||||| |    
T  49060441 ttaagcacttatagtataatggcttatcatataagtatttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagct 49060540  T
Q  174 ataagttat 182  Q
    |||||||||    
T  49060541 ataagttat 49060549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 31338471 - 31338515
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  31338471 aaaagataaaataaagtcaaactgtttttatataagttataagtt 31338515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 45593850 - 45593788
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagtta 174  Q
    |||||| ||| ||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  45593850 ttatgtataagctatttctgtaacaaaacataaaataaagtcaaactgttttcatataagtta 45593788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 182
Target Start/End: Complemental strand, 27481456 - 27481355
Alignment:
Q  81 cttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||| |||| || | |||| |||||||||||||| ||| ||||||||  |||||| |||||||  ||||||||||||||  ||||||| ||||||||    
T  27481456 cttatagcataaatgtttattatataagtgtttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagtt 27481357  T
Q  181 at 182  Q
    ||    
T  27481356 at 27481355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 30456570 - 30456514
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagt 179  Q
    ||||||||  |||||||||||||||||||||||| |||||| |||||||||||||||    
T  30456570 ctatttctaaaacaaaagataaaataaagtcaaattgttttcatataagttataagt 30456514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 47004018 - 47004082
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatat 168  Q
    |||||||||||| ||||| ||||||||  ||||| |||||||||||||||||||| |||||||||    
T  47004018 ataagtgtttatatgtaagctatttctataacaatagataaaataaagtcaaactatttttatat 47004082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 30496635 - 30496694
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    |||||||||||||| ||||||||||||  ||||||| |||||||||||||||| ||||||    
T  30496635 ataagtgtttatgtataaactatttctataacaaaatataaaataaagtcaaattgtttt 30496694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 31341133 - 31341196
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttat 175  Q
    |||||| ||| |||||| |  ||||||||||||||||||||||||||| |||||||||||||||    
T  31341133 ttatgtataagctatttgtataacaaaagataaaataaagtcaaactggttttatataagttat 31341196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 1417201 - 1417271
Alignment:
Q  110 gtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||| |||||||||| |  |||||||||||||||||||||||| |||||| |||||||  |||||||    
T  1417201 gtttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagtt 1417271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 35536046 - 35536112
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||| ||| ||||||||  |||| ||||||||||||||||||| |||||| ||||||||||||||    
T  35536046 ttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataagttataag 35536112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 173
Target Start/End: Original strand, 46531495 - 46531533
Alignment:
Q  135 caaaagataaaataaagtcaaactgtttttatataagtt 173  Q
    |||||||||||||||||||||||||||||||||||||||    
T  46531495 caaaagataaaataaagtcaaactgtttttatataagtt 46531533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 2223079 - 2223143
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatat 168  Q
    |||||||||||||| ||| ||||||||  |||||||||||||  ||||||||| |||||||||||    
T  2223079 ataagtgtttatgtataagctatttctataacaaaagataaagaaaagtcaaattgtttttatat 2223143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 3610879 - 3610803
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||| |||||| ||| ||||||||  ||||||||||||||| ||| |||||||||||  |||||| ||||||||    
T  3610879 ataagtgcttatgtataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagtt 3610803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 5006619 - 5006575
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||    
T  5006619 aacaaaagataaaataaagtcaaactgttttcatataaggtataa 5006575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 5373157 - 5373232
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||| |||||| ||  ||||||||  ||||||||||||||||||||| ||   |||||||||||||||||||||    
T  5373157 taagtgcttatgtatatgctatttctataacaaaagataaaataaagtccaaacatttttatataagttataagtt 5373232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 23918891 - 23918961
Alignment:
Q  107 agtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||||||||||||  ||| |||   ||||||||||||||||||||||| |||||| ||||||| |||||    
T  23918891 agtgtttatgtgtaagttatctctattacaaaagataaaataaagtcaaattgttttcatataagctataa 23918961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 28340525 - 28340459
Alignment:
Q  114 atgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||| ||| ||||||||  ||||||  ||||||||||||||||||||||| || |||||||||||||    
T  28340525 atgtataagctatttcttcaacaaacaataaaataaagtcaaactgttttcatgtaagttataagtt 28340459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 31002688 - 31002766
Alignment:
Q  100 ttaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||| |||||| |||||| |||||||||||    ||||||||||||||||||||||| | |||| ||||||| ||||||    
T  31002688 ttaattaagtgcttatgtataaactatttcaaccacaaaagataaaataaagtcaaaatattttcatataagctataag 31002766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 33894555 - 33894620
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    |||||| |||||| ||| ||||||||  ||||||||||||||| ||||||||||||||| |||||||    
T  33894555 taagtgcttatgtataagctatttctataacaaaagataaaat-aagtcaaactgttttcatataag 33894620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 2894745 - 2894822
Alignment:
Q  101 taaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||||||| |||| ||| ||||||||  ||||||||||||| ||||||  ||||||||| |  |||||||||||    
T  2894745 taaataagtgttcatgtataagctatttctataacaaaagataaattaaagttgaactgttttcaagtaagttataag 2894822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 29363478 - 29363523
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||| |||||||||||||||||||||||||| |||| |||||||||    
T  29363478 aacagaagataaaataaagtcaaactgttttcatattagttataag 29363523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 39591586 - 39591537
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagtt 173  Q
    |||||||  |||||||||||||||||||||||| |||||| |||||||||    
T  39591586 tatttctataacaaaagataaaataaagtcaaattgttttcatataagtt 39591537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 819862 - 819830
Alignment:
Q  141 ataaaataaagtcaaactgtttttatataagtt 173  Q
    |||||||||||||||||||||||||||||||||    
T  819862 ataaaataaagtcaaactgtttttatataagtt 819830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 2999139 - 2999199
Alignment:
Q  121 aactatttctggaacaaaagataaaataaagtcaaactgttttt-atataagttataagtt 180  Q
    ||||||||||  ||||||||||||||||||||||||| |||||| ||||||| | ||||||    
T  2999139 aactatttctataacaaaagataaaataaagtcaaaccgtttttcatataagatgtaagtt 2999199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 7243604 - 7243644
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagtt 173  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  7243604 aacaaaagataaaataacgtcaaacagtttttatataagtt 7243644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 25511558 - 25511634
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||  ||| |||| |||||||  |||||||||| ||||||||||||  | |||||||||||| ||||||||    
T  25511558 ataagtgttgttgtataaattatttctataacaaaagatgaaataaagtcaatttttttttatataagatataagtt 25511634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 28613665 - 28613597
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||| ||| |||||| |  |||||||||||||| ||||| ||| ||||||| |||||||||||||||    
T  28613665 ttatgtataagctatttttataacaaaagataaaacaaagttaaattgtttttgtataagttataagtt 28613597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 35809041 - 35808989
Alignment:
Q  106 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaact 158  Q
    |||||||||||| ||| ||||||||  |||||||||||||||| |||||||||    
T  35809041 aagtgtttatgtataagctatttctataacaaaagataaaatatagtcaaact 35808989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 2176848 - 2176895
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactg 159  Q
    |||||| || |||||||| | |||||||||||||||||||||||||||    
T  2176848 ttatgtatacactatttcagtaacaaaagataaaataaagtcaaactg 2176895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 7244633 - 7244692
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    ||||||| |||||| ||| ||||||||  | |||||||||||| ||||||||||||||||    
T  7244633 ataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgtttt 7244692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 9527200 - 9527153
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||||| ||||||||||||||||||| ||||||  ||||||||    
T  9527200 aacaaaagatataataaagtcaaactgttttcatataaactataagtt 9527153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 10079481 - 10079414
Alignment:
Q  102 aaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatata 169  Q
    |||||||| | ||||| ||| ||| ||||  |||||||||||||||| | ||||||||||||||||||    
T  10079481 aaataagtttgtatgtataagctacttctataacaaaagataaaatataatcaaactgtttttatata 10079414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 12835057 - 12835002
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||||  |||||||||||||||||||||||| |||||| |||| || ||||||    
T  12835057 ctatttctacaacaaaagataaaataaagtcaaattgttttcatattagctataag 12835002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 15075209 - 15075146
Alignment:
Q  120 aaactatttctggaacaaaagataaaataaagtcaaa-ctgtttttatataagttataagttat 182  Q
    |||||||||||  |||||||||||||||  | ||||| || |||||||||||||||||||||||    
T  15075209 aaactatttctataacaaaagataaaatttaatcaaaactatttttatataagttataagttat 15075146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 24975835 - 24975902
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    ||||||| | |||| ||| ||| ||||  ||||||||||||||||||| | |||||||||||||||||    
T  24975835 ataagtgctgatgtataatctacttctataacaaaagataaaataaaggcgaactgtttttatataag 24975902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 30133980 - 30134031
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaa 155  Q
    |||||||||||||| ||| |||||| |  |||||||||||||||||||||||    
T  30133980 ataagtgtttatgtataagctatttttacaacaaaagataaaataaagtcaa 30134031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 45777281 - 45777234
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||||||||| ||||||||||||||| ||||||  ||||||||    
T  45777281 aacaaaagataaaattaagtcaaactgttttcatataaactataagtt 45777234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 5272954 - 5272892
Alignment:
Q  109 tgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    ||||||||| |||||||||| |  ||||||||||||||| |||||| | |||||| |||||||    
T  5272954 tgtttatgtataaactatttatataacaaaagataaaattaagtcacattgttttcatataag 5272892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 18749920 - 18749882
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  18749920 aacaaaagataaagtaaagtcaaactatttttatataag 18749882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 27492734 - 27492800
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||| ||||||||||||  |||||||| | ||||||| ||||||| |||| |||||||| |||||    
T  27492734 ttatgtataaactatttctataacaaaagttcaaataaaatcaaacttttttcatataagtaataag 27492800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 27626263 - 27626197
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    |||| ||||||||| ||| ||||||||  | |||||| ||||||||||||||||| || ||||||||    
T  27626263 ataattgtttatgtataagctatttctatatcaaaagctaaaataaagtcaaactattattatataa 27626197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 2727496 - 2727435
Alignment:
Q  107 agtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatat 168  Q
    |||||| |||| || |||||||||  ||||||||||||||||||| |||||| |||| ||||    
T  2727496 agtgttgatgtatagactatttctataacaaaagataaaataaaggcaaactcttttcatat 2727435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 17989133 - 17989096
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  17989133 aacaaaatataaaataaagtcaaactgttttcatataa 17989096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 21076992 - 21077029
Alignment:
Q  141 ataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  21076992 ataaaataaagtcaaactgttttaatataaggtataag 21077029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 180
Target Start/End: Complemental strand, 29769026 - 29768989
Alignment:
Q  143 aaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  29769026 aaaataaagtcaaaatgtttttatataagctataagtt 29768989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 39551687 - 39551614
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||| |||| || ||| ||||||||  ||||||||||| | |||||| |||||||||| ||||||| |||||    
T  39551687 ataagtatttaagtataagctatttctataacaaaagatatactaaagtaaaactgttttcatataagctataa 39551614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 46081964 - 46082041
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaa-ctgtttttatataagttataagtt 180  Q
    ||||||| |||| | ||| ||||||||  ||| |||| ||||| ||||||||| ||||||| ||||||||||||||||    
T  46081964 ataagtgattatatataagctatttctataacgaaagttaaaacaaagtcaaaactgttttcatataagttataagtt 46082041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 946715 - 946759
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||||||||||||||| ||||||  ||| |||||||||||    
T  946715 aaaagataaaataaagtcaaattgttttcgtattagttataagtt 946759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 1423076 - 1423136
Alignment:
Q  103 aataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    |||||||| |||||| ||| ||||||    |||||||||||||||||| ||||||||||||    
T  1423076 aataagtgattatgtataagctattttcataacaaaagataaaataaattcaaactgtttt 1423136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 4591466 - 4591518
Alignment:
Q  97 taattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataa 149  Q
    |||||| |||||||||||||| ||| |||| |||  |||||||||||||||||    
T  4591466 taattatataagtgtttatgtataagctatctctataacaaaagataaaataa 4591518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 5010587 - 5010531
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||| || ||||||| |||||||||||| ||| | |||||||||||| ||||||||    
T  5010587 tatttatgtaacaaaatataaaataaagtgaaattatttttatataaggtataagtt 5010531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 12234996 - 12234952
Alignment:
Q  134 acaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||||||||||| ||||| |||||||  |||||||||||||    
T  12234996 acaaaagataaaataatgtcaatctgttttcgtataagttataag 12234952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 24967015 - 24967074
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgttttt 164  Q
    ||||||| |||||||||||| |||| |  | |||||| |||||||||||||||||||||||    
T  24967015 ataagtgcttatgtgtaaaccatttgtaca-caaaagctaaaataaagtcaaactgttttt 24967074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 28165051 - 28165095
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||||||||||||| |||||||| |||||| ||||||| |||||    
T  28165051 aacaaaagataaaatgaagtcaaattgttttaatataagctataa 28165095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 163
Target Start/End: Complemental strand, 30160998 - 30160970
Alignment:
Q  135 caaaagataaaataaagtcaaactgtttt 163  Q
    |||||||||||||||||||||||||||||    
T  30160998 caaaagataaaataaagtcaaactgtttt 30160970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 39505858 - 39505946
Alignment:
Q  74 ttaagcacttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgttt 162  Q
    ||||||| |||||| |||| || | || || ||||||||||||| |||  ||||| || | |||||||| ||||| |||||||||||||    
T  39505858 ttaagcatttatagcataaatgtttatcaagtaagtgtttatgtataagttatttttgtagcaaaagattaaatagagtcaaactgttt 39505946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 31337511 - 31337464
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31337511 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 31337464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 26599138 - 26599192
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagttatcctga 187  Q
    ||||||||||||||||||||||||  ||||| ||||||| |||||||||||||||    
T  26599138 aacaaaagataaaataaagtcaaatagttttcatataaggtataagttatcctga 26599192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 36139804 - 36139885
Alignment:
Q  99 attaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||||| |||||  ||| ||||||||| || | |||||||||||||||||||||| |||  |||||| ||||||||    
T  36139804 attaaataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataagctataagtt 36139885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 38462212 - 38462277
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatata 169  Q
    |||||||||||| | ||| ||||||||  | ||||||||||||||||||||||||||||| |||||    
T  38462212 ataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatata 38462277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 179
Target Start/End: Complemental strand, 43116565 - 43116492
Alignment:
Q  106 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagt 179  Q
    |||||||||||||||| ||||||||  ||||||||||||||| || ||||||  |||| ||||||| |||||||    
T  43116565 aagtgtttatgtgtaagctatttctataacaaaagataaaatcaaatcaaacaattttcatataagctataagt 43116492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 1816546 - 1816590
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||    
T  1816546 aaaagataaaataaagtcaaactgtttttgtataagatataagtt 1816590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 49587036 - 49586988
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    ||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  49587036 ctatttctataacaaaagataaaataaagtcaaactgttttcatataag 49586988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 236
Target Start/End: Original strand, 42745007 - 42745114
Alignment:
Q  134 acaaaagataaaataaagtcaaactgtttttatataagttataagt-----tatcctgaagagcttaagaatataagttgaagacaacttatcaacatgt 228  Q
    ||||||||||||||||| || ||||||||| | |||||||||||||     |||| | || |||||| | | ||||| |||| ||||||||| |||||||    
T  42745007 acaaaagataaaataaattcgaactgttttcacataagttataagttaagctatcttcaaaagcttatggaaataagatgaaaacaacttatgaacatgt 42745106  T
Q  229 cataagtt 236  Q
    ||||||||    
T  42745107 cataagtt 42745114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 33307583 - 33307517
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||| |||| ||||||| || |||||||||||| || | |||||| |||||||||||||||||||    
T  33307583 ttatgtataaattatttctagagcaaaagataaaacaatgccaaactatttttatataagttataag 33307517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 20192744 - 20192679
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    |||||| |||||| ||| |||||| |  ||||||||||||||||||||||||| ||||| ||||||    
T  20192744 taagtgcttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataa 20192679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 42039085 - 42039165
Alignment:
Q  99 attaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||| |||||| |||||| ||| ||||||||| ||||||| |||||||||||||| | || ||| |||| |||||||||||    
T  42039085 attaactaagtgcttatgtataagctatttctgtaacaaaaaataaaataaagtcaga-tggtttcatatgagttataagtt 42039165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 12923464 - 12923388
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||| || ||| ||| ||||| ||| || |||||||||||||||||||||||| |||  |||||| ||||||||    
T  12923464 ataagtgcttgtgtataagctattgctgtaataaaagataaaataaagtcaaactgctttcttataagctataagtt 12923388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 25925764 - 25925820
Alignment:
Q  182 tcctgaagagcttaagaatataagttgaagacaacttatcaacatgtcataagttct 238  Q
    ||||| |||||||| ||| |||||||||| ||| ||||| |||||||||||||||||    
T  25925764 tcctggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataagttct 25925820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 34234844 - 34234888
Alignment:
Q  134 acaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||    
T  34234844 acaaaagataaaataaagttaaaatgtttttctataagttataag 34234888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 40122883 - 40122816
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||| ||| |||||||   ||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  40122883 ttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcata-aagctataagtt 40122816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 44389130 - 44389078
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaa 156  Q
    |||| ||||||| ||||||||||||||  | ||||||||||||||||||||||    
T  44389130 ataaatgtttatctgtaaactatttctacaccaaaagataaaataaagtcaaa 44389078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 48397609 - 48397653
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||||    
T  48397609 aaaagataaaataaagtcaaattgtttttatttaagctataagtt 48397653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 2128390 - 2128331
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    ||||| |||||||| ||| ||||||||  |||||||||||||||||||| ||| ||||||    
T  2128390 ataagcgtttatgtataagctatttctataacaaaagataaaataaagttaaattgtttt 2128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 172
Target Start/End: Original strand, 22232786 - 22232825
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagt 172  Q
    |||||| |||||||||||||||||||||||| ||||||||    
T  22232786 aacaaatgataaaataaagtcaaactgttttcatataagt 22232825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 27792803 - 27792870
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    ||||||| |||||| ||| |||||||   ||||||||||||||||| |||||||| |||| |||||||    
T  27792803 ataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataag 27792870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 28306118 - 28306165
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||  |||||||||||||||||||||| |||||||||| |||||    
T  28306118 aacaaaaagtaaaataaagtcaaactgttttcatataagttacaagtt 28306165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 31713949 - 31713995
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||||||||    
T  31713949 aacaaaagataaa-taaagtcaaactgttttgatacaagttataagtt 31713995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 36783474 - 36783407
Alignment:
Q  104 ataagtgtttatgtgtaaa-ctatttctggaacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    |||||||||||||| |||| ||||||||  | |||||||||||||||||| ||| |||||| ||||||    
T  36783474 ataagtgtttatgtataaagctatttctataccaaaagataaaataaagtaaaattgttttcatataa 36783407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 41028990 - 41028931
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    ||||||| |||||| ||| ||||||||  ||||||||| ||||||||||||| |||||||    
T  41028990 ataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaatctgtttt 41028931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 44374783 - 44374724
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    ||||||| |||||| ||| |||| |||  |||||||||||||||||||||||| ||||||    
T  44374783 ataagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaaattgtttt 44374724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 48872277 - 48872336
Alignment:
Q  108 gtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttata 167  Q
    |||||||||| |||  |||||||  |||||||| |||||||||| |||||||||||||||    
T  48872277 gtgtttatgtataatatatttctataacaaaagttaaaataaagccaaactgtttttata 48872336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 167
Target Start/End: Complemental strand, 659933 - 659899
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttata 167  Q
    |||||||||||||||||||||||||| ||||||||    
T  659933 aacaaaagataaaataaagtcaaactatttttata 659899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 1395611 - 1395669
Alignment:
Q  113 tatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    ||||| ||| ||||||||  |||||||||||||||||||||||| | |||| |||||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataag 1395669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 3757980 - 3758038
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    |||||| |||||| ||| |||||| || ||||||| |||||||||||||||||| ||||    
T  3757980 taagtgcttatgtataagctatttttgtaacaaaatataaaataaagtcaaactctttt 3758038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 36101497 - 36101575
Alignment:
Q  102 aaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||| |||||  ||| ||||||||| || | |||||||||||||||||||||| |||  |||||  ||||||||    
T  36101497 aaataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataatctataagtt 36101575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 42808939 - 42808977
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  42808939 aacaaaagataaaataaagttaaattgtttttatataag 42808977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 47584412 - 47584478
Alignment:
Q  111 tttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||||||||| ||||||||   ||||||| |||||||||||||||| ||||| || |||| |||||    
T  47584412 tttatgtgtaagctatttctatgacaaaaggtaaaataaagtcaaaccgttttaatgtaagctataa 47584478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 54775079 - 54775125
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    |||||||  |||||||||||||||||||||||||  |||||||||||    
T  54775079 tatttctataacaaaagataaaataaagtcaaaccatttttatataa 54775125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 170
Target Start/End: Original strand, 2070951 - 2071052
Alignment:
Q  69 tttagttaagcacttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatat 168  Q
    |||| |||||||||||||| ||||||  | || | ||||||||| |||| ||| ||||||||  ||||||||||||| || |||  |||| |||| ||||    
T  2070951 tttaattaagcacttatagcataagtacttatcacataagtgttaatgtataagctatttctttaacaaaagataaagtagagtataactattttcatat 2071050  T
Q  169 aa 170  Q
    ||    
T  2071051 aa 2071052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 2201092 - 2201133
Alignment:
Q  137 aaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||||| |||||||||||||||| ||||||| ||||||    
T  2201092 aaagataaaacaaagtcaaactgttttcatataagctataag 2201133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 3044306 - 3044253
Alignment:
Q  183 cctgaagagcttaagaatataagttgaagacaacttatcaacatgtcataagtt 236  Q
    |||| |||||||| ||| |||||||||| ||| ||||| |||||||||||||||    
T  3044306 cctggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataagtt 3044253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 8007826 - 8007761
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||| ||| || |||||  ||||||||||||| ||||||||||||||| | ||||||| |||||    
T  8007826 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 8007761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 24605154 - 24605081
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||||||||| |||  |||||||  |||||||||| ||||||||||||||  |||  || |||||||||||    
T  24605154 taagtgtttatgtataagttatttctataacaaaagatgaaataaagtcaaaccatttgcatgtaagttataag 24605081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 177
Target Start/End: Original strand, 32703069 - 32703142
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||| ||||||||| ||| ||||||||   | ||||||||||||||| ||||| |||||| ||||||| |||||    
T  32703069 ataaatgtttatgtataagctatttctattataaaagataaaataaactcaaattgttttcatataagctataa 32703142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 33307719 - 33307650
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagtt 173  Q
    ||||||| |||||| ||| ||||||| | ||||||| || ||||||||||||| | |||| |||||||||    
T  33307719 ataagtgcttatgtataagctatttcagtaacaaaatatgaaataaagtcaaattattttcatataagtt 33307650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 33965601 - 33965564
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  33965601 aacaaaaggtaaaataaagtcaaactgttttcatataa 33965564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 34254929 - 34254888
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgttttt 164  Q
    ||||||||| | |||| |||||||||||||||||||||||||    
T  34254929 ctatttctgtagcaaatgataaaataaagtcaaactgttttt 34254888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 34954031 - 34954080
Alignment:
Q  121 aactatttctggaacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    ||||||||||  |||| |||||||||||||||||| ||||||| ||||||    
T  34954031 aactatttctataacacaagataaaataaagtcaagctgttttcatataa 34954080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 35364254 - 35364299
Alignment:
Q  135 caaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||| ||||||||||| ||| | |||||||||||||||||||||    
T  35364254 caaaaggtaaaataaagttaaattatttttatataagttataagtt 35364299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 51278286 - 51278225
Alignment:
Q  114 atgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttat 175  Q
    |||| ||| ||||||||  ||||||| || |||||||||||||||||||| || ||||||||    
T  51278286 atgtataagctatttctataacaaaatattaaataaagtcaaactgttttcatttaagttat 51278225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 53736232 - 53736183
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagtt 173  Q
    |||||||  ||||||||||||||||| |||||||| |||| |||||||||    
T  53736232 tatttctataacaaaagataaaataatgtcaaactattttcatataagtt 53736183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 3182469 - 3182429
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatataagttata 176  Q
    ||||||||||||||||||||| |||||| ||| ||||||||    
T  3182469 aaaagataaaataaagtcaaattgttttcatacaagttata 3182429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 10101595 - 10101539
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||  |||||||||||||||||||| ||| |||||| ||||||| || |||||    
T  10101595 tatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagtt 10101539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 10212520 - 10212464
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||  |||||||||||||||||||| ||| |||||| ||||||| || |||||    
T  10212520 tatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagtt 10212464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 22667356 - 22667416
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgttttt 164  Q
    ||||||| |||||| ||| ||| ||||  ||||||||||||||| ||| ||||||||||||    
T  22667356 ataagtgcttatgtttaagctacttctataacaaaagataaaatgaagccaaactgttttt 22667416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 22723995 - 22724055
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgttttt 164  Q
    ||||||| |||||| ||| ||| ||||  ||||||||||||||| ||| ||||||||||||    
T  22723995 ataagtgcttatgtttaagctacttctataacaaaagataaaatgaagccaaactgttttt 22724055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 23249529 - 23249565
Alignment:
Q  144 aaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  23249529 aaatgaagtcaaactgtttttatataagatataagtt 23249565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 24235802 - 24235746
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||  |||||||||||| ||||||||||||| |||  ||||||| ||||||||    
T  24235802 tatttctataacaaaagataatataaagtcaaactatttgaatataagctataagtt 24235746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 24887403 - 24887355
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    ||||||||  ||||| |||||||||||||||||||||| || |||||||    
T  24887403 ctatttctataacaatagataaaataaagtcaaactgtattcatataag 24887355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 33882969 - 33883033
Alignment:
Q  114 atgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||| |||| |||||||  |||||||||||||||||||| ||| | |||||||  ||||||||||    
T  33882969 atgtataaattatttctataacaaaagataaaataaagtgaaattatttttatgcaagttataag 33883033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 34958274 - 34958318
Alignment:
Q  119 taaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    ||||||||||||  |||| |||||||||||||||||| |||||||    
T  34958274 taaactatttctataacacaagataaaataaagtcaagctgtttt 34958318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 47131953 - 47131997
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||| ||||||||||||| |||| |||| ||||||||||||||||    
T  47131953 aaaatataaaataaagtcgaacttttttaatataagttataagtt 47131997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 52440718 - 52440658
Alignment:
Q  174 ataagttatcctgaagagcttaagaatataagttgaagacaacttatcaacatgtcataag 234  Q
    |||| ||||| |||||| |||| ||| || ||||||| ||||||||| |||||||||||||    
T  52440718 ataatttatcttgaagaacttatgaaaattagttgaaaacaacttatgaacatgtcataag 52440658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 180
Target Start/End: Original strand, 19177388 - 19177486
Alignment:
Q  82 ttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||| |||||||| || | ||||||| |||||| ||||||||||||  |||| |||||||||| ||||| ||||||||| ||||||| ||||||||    
T  19177388 ttatagtctaagtgattatcatataagtgcttatgtataaactatttctacaacagaagataaaattaagtctaactgttttcatataagctataagtt 19177486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 35135801 - 35135725
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||||||| |||  |||||||  |||||||||||||||||||||||||| |||| ||||||| ||||||||    
T  35135801 ataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataagtt 35135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 28586897 - 28586831
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||| || |||||||||  ||||||||||||||||||||||||||||||| |||||| |||||||    
T  28586897 ttatgtatacactatttctataacaaaagataaaataaagtcaaactgttttcatataaattataag 28586831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 37063205 - 37063144
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagtt 173  Q
    |||||| ||||||||||||  |||||||||||||||||||||||||| |||| |||||||||    
T  37063205 ttatgtataaactatttctataacaaaagataaaataaagtcaaactattttcatataagtt 37063144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 36539677 - 36539753
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||| |||||||||| |||||| |  | ||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  36539677 ataagtgcttatgtgtaagctatttgtttatcaaaagataaaataaagtcaacctgttttcatataagctataagtt 36539753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 14295456 - 14295511
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||||  ||||||||||||||||||||||||||||||| ||||||| ||||||    
T  14295456 ctatttctataacaaaagataaaataaagtcaaactgttttcatataagctataag 14295511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 39750103 - 39750147
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||||||||||||||||||||||| |||| |||||||||||||    
T  39750103 aacaaaagataaaataaagtcaaactattttcatataagttataa 39750147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 583883 - 583836
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||| |||||||||||||||||||||||||| ||||||| ||||||||    
T  583883 aacagaagataaaataaagtcaaactgttttcatataagctataagtt 583836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 12407792 - 12407725
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagt 179  Q
    |||||| ||| ||||||||  |||||||||||||||||||| || ||||||| || ||||||||||||    
T  12407792 ttatgtataagctatttctataacaaaagataaaataaagtaaatctgttttcatgtaagttataagt 12407725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 14599436 - 14599366
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaa--gataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||| ||| ||||||||  |||||||  |||||||| ||||||||||||||| ||||||||||||||||    
T  14599436 ttatgtttaagctatttctataacaaaactgataaaattaagtcaaactgttttcatataagttataagtt 14599366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 41277456 - 41277413
Alignment:
Q  137 aaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||||||||||||||||||||| |||||||||| |||||    
T  41277456 aaagataaaataaagtcaaactgttttcatataagttaaaagtt 41277413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 21782712 - 21782650
Alignment:
Q  100 ttaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgttt 162  Q
    |||| ||||||||||||| ||| ||||||||  |||||||| ||||||||||||||| |||||    
T  21782712 ttaattaagtgtttatgtttaagctatttctataacaaaagctaaaataaagtcaaattgttt 21782650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 35095922 - 35095864
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgttt 162  Q
    ||||||| |||| | ||||||||||||  |||||||||||||||||||||||| |||||    
T  35095922 ataagtgcttatatttaaactatttctataacaaaagataaaataaagtcaaattgttt 35095864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 169
Target Start/End: Original strand, 35963150 - 35963244
Alignment:
Q  75 taagcacttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatata 169  Q
    ||||||||||||| ||||| ||| || ||||||||| || ||| |||| |||||||  || ||||||| ||||||| | |||||||||| |||||    
T  35963150 taagcacttatagcataagcgattatcaaataagtgcttgtgtataaattatttctataagaaaagatcaaataaaattaaactgttttcatata 35963244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 20982297 - 20982208
Alignment:
Q  81 cttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    ||||||| ||||||| | || | ||||||| |||||| ||| ||||||||  |||||| |||||||||||||||| | ||||| ||||||    
T  20982297 cttatagcataagtgcttatcatataagtgcttatgtataagctatttctataacaaaggataaaataaagtcaacccgttttcatataa 20982208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 2933758 - 2933714
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||    
T  2933758 aaaagataaaatgaagttaaactgttttcatataagttataagtt 2933714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 10303747 - 10303791
Alignment:
Q  119 taaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||    
T  10303747 taaactatttctataacaaaagataaaataaagtcaaattgtttt 10303791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 13604905 - 13604845
Alignment:
Q  174 ataagttatcctgaagagcttaagaatataagttgaagacaacttatcaacatgtcataag 234  Q
    |||||||||| ||||||||||| ||| |||||||||| ||||| |||  ||||||||||||    
T  13604905 ataagttatcttgaagagcttatgaaaataagttgaaaacaacgtatggacatgtcataag 13604845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 32059694 - 32059654
Alignment:
Q  138 aagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  32059694 aagataaaataaagtcaaactgttttcatataagctataag 32059654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 7096264 - 7096213
Alignment:
Q  106 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaac 157  Q
    ||||| |||||| ||| ||||||||  |||||||||||||||||||||||||    
T  7096264 aagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaac 7096213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 9202887 - 9202820
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    ||||||| |||| | ||| ||||||||| | |||||||||||||||||| ||| |||||| |||||||    
T  9202887 ataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataag 9202820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 11835208 - 11835267
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    |||||||||||||| ||||| |||| |  |||||||||||||||||||| ||| ||||||    
T  11835208 ataagtgtttatgtataaaccatttttataacaaaagataaaataaagttaaattgtttt 11835267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 29117049 - 29117010
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  29117049 tatttctataacaaaagataaaataaagtcaaactgtttt 29117010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 163
Target Start/End: Original strand, 985593 - 985623
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttt 163  Q
    |||||||||||||||||||||||||||||||    
T  985593 aacaaaagataaaataaagtcaaactgtttt 985623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 10125774 - 10125712
Alignment:
Q  174 ataagttatcctgaagagcttaagaatataagttgaagacaacttatcaacatgtcataagtt 236  Q
    |||||||| | || |||||||| ||| ||||| |||| ||| |||||||||||||||||||||    
T  10125774 ataagttaccatggagagcttatgaaaataagctgaaaacaccttatcaacatgtcataagtt 10125712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 16889674 - 16889740
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||| ||| |||||||   ||||||||||||| | ||||||||||||||||||| ||| ||||||    
T  16889674 ttatgtataagctatttccataacaaaagataaacttaagtcaaactgtttttatagaagctataag 16889740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 17258933 - 17258879
Alignment:
Q  180 tatcctgaagagcttaagaatataagttgaagacaacttatcaacatgtcataag 234  Q
    |||||||||||||||| ||| ||||| |||| ||| ||||| |||||||||||||    
T  17258933 tatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataag 17258879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 32172592 - 32172658
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||| ||||||||||||  ||||||||||||||| |||||||  |||||  ||||||| ||||||    
T  32172592 ttatgtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataag 32172658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 32969227 - 32969189
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  32969227 aacaaaagataaaataaagtcaaattatttttatataag 32969189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 35960345 - 35960399
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaact 158  Q
    |||||| ||||||  ||||||||||||  || |||||||||||||||||||||||    
T  35960345 ataagtatttatgcataaactatttctataataaaagataaaataaagtcaaact 35960399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 33234329 - 33234366
Alignment:
Q  141 ataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  33234329 ataaaatgaagtcaaactgtttttatataagctataag 33234366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 38831576 - 38831519
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||  | ||||||||||||||||||||||||||||  ||||| | |||||||    
T  38831576 ctatttctgttataaaagataaaataaagtcaaactgttttcgtataaatgataagtt 38831519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 170
Target Start/End: Complemental strand, 6734061 - 6733966
Alignment:
Q  74 ttaagcacttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    |||||| ||| || |||||||||| || | |||||||||||||  ||| |||||| |  ||| |||||||||||||||| ||| |||||| ||||||    
T  6734061 ttaagcgcttctaatataagtgattatcatataagtgtttatgcataatctatttttataacgaaagataaaataaagt-aaattgttttcatataa 6733966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 9703359 - 9703303
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||| ||||| ||||||||||||||||||||  ||| ||||||| || |||||    
T  9703359 tatttctgtaacaagagataaaataaagtcaaactcatttcatataagctacaagtt 9703303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 18704154 - 18704099
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||  ||||||||||||| ||||||||| || |||||||||||| ||||||||    
T  18704154 tatttctataacaaaagataaa-taaagtcaagctatttttatataagctataagtt 18704099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 21768253 - 21768193
Alignment:
Q  174 ataagttatcctgaagagcttaagaatataagttgaagacaacttatcaacatgtcataag 234  Q
    |||||||||| ||||||||||| ||| |||||||||| ||| | |||  ||||||||||||    
T  21768253 ataagttatcttgaagagcttacgaaaataagttgaaaacagcgtatggacatgtcataag 21768193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 26516199 - 26516275
Alignment:
Q  74 ttaagcacttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaa 150  Q
    |||||| ||||||| ||||| | | || | ||||||| |||||| ||| ||||||||  ||||||||||||||||||    
T  26516199 ttaagcgcttatagcataagcgcttatcatataagtgcttatgtataagctatttctaaaacaaaagataaaataaa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 26516360 - 26516404
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||| ||||||||||||||||||||  ||| |||||||||||||    
T  26516360 aacaatagataaaataaagtcaaactactttcatataagttataa 26516404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 31694449 - 31694525
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||| |||||  ||| |||| |||  ||||||| ||||| ||||||||||||||||||||| ||  ||||||||    
T  31694449 ataagtgcttatgaataagctatgtctataacaaaacataaactaaagtcaaactgtttttatacaaactataagtt 31694525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 40159779 - 40159823
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||||||| || |||||||||| |||||| |||||||||||||    
T  40159779 aacaaaagattaagtaaagtcaaattgttttcatataagttataa 40159823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 11000671 - 11000573
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagttatcctgaagagcttaagaatataagttgaagacaacttatcaacatgtcata 232  Q
    |||||||||||||||||||||||| ||||||   ||||| ||||||  ||||||||||||||| | | ||||| |||||||||||||| |||| ||||||    
T  11000671 aacaaaagataaaataaagtcaaattgttttcgaataagctataag--atcctgaagagcttatggaaataagctgaagacaacttatgaacaagtcata 11000574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 39392830 - 39392744
Alignment:
Q  74 ttaagcacttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgt 160  Q
    ||||||| |||||| ||||||| | || | |||||||  ||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  39392830 ttaagcatttatagcataagtgcttatcatataagtggctatgtataaactatttctataacaaaagataaaataaagtcaaactgt 39392744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 14482133 - 14482193
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgttttt 164  Q
    ||||||| |||||| ||||||||||||  |||||||||||||||||||||||| |||||||    
T  14482133 ataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaaattgttttt 14482193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 8066951 - 8066909
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttat 175  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  8066951 aacaaaagataaaataaagtcaaactggttttatataagttat 8066909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 234
Target Start/End: Original strand, 20672732 - 20672824
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagttatcctgaagagcttaagaatataagttgaagacaacttatcaacatgtcata 232  Q
    ||||||||||||||||||||||||||||||         ||||||| ||||||| |||||||| ||| ||||| |||| ||| ||||| |||||||||||    
T  20672732 aacaaaagataaaataaagtcaaactgttt---------ttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcata 20672822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 29056128 - 29056060
Alignment:
Q  106 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagtta 174  Q
    |||||||||||| ||| ||| |||| || |||||||||||||||||||||  |||||| ||||||||||    
T  29056128 aagtgtttatgtataagctacttctagagcaaaagataaaataaagtcaatttgttttcatataagtta 29056060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 180
Target Start/End: Original strand, 10727098 - 10727204
Alignment:
Q  74 ttaagcacttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagtt 173  Q
    ||||||| |||||| ||||||| | || | ||||||| |||||  ||| ||||||||  | |||||||| ||||||| ||||| |||||| | |||||||    
T  10727098 ttaagcatttatagcataagtgttcatcatataagtgcttatgcataagctatttctatagcaaaagatgaaataaattcaaagtgttttcacataagtt 10727197  T
Q  174 ataagtt 180  Q
    |||||||    
T  10727198 ataagtt 10727204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 40728537 - 40728484
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||||  |||||||||||||||||||||||||||||||| || |||| ||||    
T  40728537 tatttctataacaaaagataaaataaagtcaaactgtttttttacaagtcataa 40728484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 25872515 - 25872439
Alignment:
Q  134 acaaaagataaaataaagtcaaactgtttttatataagttataagttatcctgaagagcttaagaatataagttgaa 210  Q
    ||||||||| | ||||||| |||||||||| |||||||||||||| ||||||   ||||||| ||| ||||| ||||    
T  25872515 acaaaagatgatataaagtaaaactgttttcatataagttataagctatcctagtgagcttatgaaaataagctgaa 25872439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 33912096 - 33912140
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||    
T  33912096 aaaagttaaaataaactcaaactgtttctatataagttataagtt 33912140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 45071163 - 45071207
Alignment:
Q  134 acaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||    
T  45071163 acaaaagacaaaataaagtcaaattgtttttatataagctataag 45071207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 787275 - 787172
Alignment:
Q  74 ttaagcacttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagtt 173  Q
    |||||||||||||| |||| || | || |  |||||| |||||| ||| || |||| | |||| ||||||||||||||||||| |||| | ||||||| |    
T  787275 ttaagcacttatagcataaatgtttatcatctaagtgcttatgtttaagctgtttccgtaacataagataaaataaagtcaaattgttatcatataagct 787176  T
Q  174 ataa 177  Q
    ||||    
T  787175 ataa 787172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 2605959 - 2606018
Alignment:
Q  113 tatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagt 172  Q
    ||||| ||||||||||||   |||||||||||||| |||||||||| ||| |||||||||    
T  2605959 tatgtttaaactatttctatgacaaaagataaaattaagtcaaactatttctatataagt 2606018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 34770824 - 34770899
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||| ||||||  ||||||||||    ||||||||||||||||||||||| |||||| || |||| ||||||||    
T  34770824 taagtgcttatgtaaaaactatttccattacaaaagataaaataaagtcaaattgttttcatttaagctataagtt 34770899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 35298617 - 35298558
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    ||||||| |||||| ||| ||||||| | ||||||||||||||||||| ||||| |||||    
T  35298617 ataagtgcttatgtataagctatttcagtaacaaaagataaaataaagccaaacagtttt 35298558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 163
Target Start/End: Original strand, 10437845 - 10437875
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttt 163  Q
    |||||||||||||||||||||||||||||||    
T  10437845 aacaaaagataaaataaagtcaaactgtttt 10437875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 29699205 - 29699259
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||  |||||||||||||||||||||||| |||| | || |||||||||||    
T  29699205 tatttctataacaaaagataaaataaagtcaaaatgttgtcatctaagttataag 29699259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 35535000 - 35534934
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    ||||||| |||| | ||| ||||||||  || ||||| ||||||||||||||||||||||| |||||    
T  35535000 ataagtgcttatatataagctatttctataataaaagttaaaataaagtcaaactgtttttgtataa 35534934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 4558730 - 4558803
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||||||||| ||| ||||||||  || ||||||||||||||||| ||| | |||| ||||| | ||||||    
T  4558730 taagtgtttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataag 4558803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 6918348 - 6918259
Alignment:
Q  74 ttaagcacttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    |||||||||||||   |||||| | || | |||||||||| | | ||| |||||| |  || ||||||||||||||||||||||||||||    
T  6918348 ttaagcacttataacttaagtgcttataatataagtgtttgtatataagctatttatataataaaagataaaataaagtcaaactgtttt 6918259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 7026691 - 7026736
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||||||||||||||| ||| |||||| ||||||| ||||||    
T  7026691 aacaaaagataaaataaagtaaaattgttttcatataaggtataag 7026736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 7853366 - 7853411
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||||||| |||||||||||| || ||||||||||| ||||||    
T  7853366 aacaaaagatataataaagtcaaattgattttatataaggtataag 7853411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 11119118 - 11119077
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgttttta 165  Q
    |||||||  |||||||||||||||||||||||||||| ||||    
T  11119118 tatttctataacaaaagataaaataaagtcaaactgtgttta 11119077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 11188294 - 11188221
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||||| |||||| |||  | |||||  ||||||||||||||||||  |||||| ||||||||| ||||||||    
T  11188294 ataagtgcttatgtataagttgtttctataacaaaagataaaataaaaccaaactatttttatattagttataa 11188221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 26056016 - 26056073
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtt 161  Q
    |||||||||||||| ||| ||| ||||  |||||||||||||||| || |||||||||    
T  26056016 ataagtgtttatgtataagctaattctaaaacaaaagataaaatatagccaaactgtt 26056073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 38561686 - 38561719
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttat 166  Q
    |||||||||||||||||||||||||| |||||||    
T  38561686 aacaaaagataaaataaagtcaaactatttttat 38561719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 42215428 - 42215379
Alignment:
Q  121 aactatttctggaacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    ||||||||||  ||||  |||||||||||||||||||||||||| |||||    
T  42215428 aactatttctacaacatgagataaaataaagtcaaactgtttttgtataa 42215379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 2482830 - 2482870
Alignment:
Q  138 aagataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||||||||||||||| ||||||| |||||| ||||||    
T  2482830 aagataaaataaagtcaaaatgtttttgtataagctataag 2482870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 3945205 - 3945281
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||||| | |||  ||||||   |||||||||||||||||| | || || |||||||||||| ||||||||    
T  3945205 ataagtgtttatatataagttatttcaataacaaaagataaaataaaatgaagctatttttatataagctataagtt 3945281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 6509408 - 6509368
Alignment:
Q  138 aagataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||||||||||||||| ||| |||||||||| ||||||    
T  6509408 aagataaaataaagtcaaattgtatttatataagctataag 6509368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 6864562 - 6864522
Alignment:
Q  140 gataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||||||||||||| |||| || |||||||||||||    
T  6864562 gataaaataaagtcaaactattttcatgtaagttataagtt 6864522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 11795053 - 11795097
Alignment:
Q  134 acaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||| ||| |||||||||| |||||||| ||||||||||||||    
T  11795053 acaaaacatacaataaagtcacactgttttcatataagttataag 11795097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 26479743 - 26479775
Alignment:
Q  137 aaagataaaataaagtcaaactgtttttatata 169  Q
    |||||||||||||| ||||||||||||||||||    
T  26479743 aaagataaaataaaatcaaactgtttttatata 26479775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 34788533 - 34788493
Alignment:
Q  137 aaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||||||||||||||||||||||||  ||||||| |||||    
T  34788533 aaagataaaataaagtcaaactgtttccatataagctataa 34788493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 42237532 - 42237488
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||||||||||||||||| ||| |||||| ||||||| |||||    
T  42237532 aacaaaagataaaataaagttaaattgttttcatataagctataa 42237488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 42597340 - 42597408
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||| ||| ||||||||  |||||||||||||||||||| ||| |||||| ||  ||| ||||||||    
T  42597340 ttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagtt 42597408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 8349803 - 8349734
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagtt 173  Q
    |||||||||| ||| ||||||||||||  |||||||||||||||||||| ||| ||||||||||||||||    
T  8349803 ataagtgtttgtgtataaactatttctctaacaaaagataaaataaagttaaattgtttttatataagtt 8349734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 5551422 - 5551510
Alignment:
Q  133 aacaaaagataaaataaagtcaaactg-tttttatataagttataagttatcctgaagagcttaagaatataagttgaagacaacttat 220  Q
    |||||||||||||||||||||||| || |||||||||| | |||||| ||||||| | |||| | ||| |||||||||| |||||||||    
T  5551422 aacaaaagataaaataaagtcaaattgttttttatatatgctataagctatcctggacagctaatgaagataagttgaaaacaacttat 5551510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 10154184 - 10154226
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  10154184 aaaagataaaataaagtcaaactgttttcatataagttataag 10154226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 32975909 - 32975967
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgttt 162  Q
    |||||||||||||| |||  |||||||| ||||||| ||||||||||||||||||||||    
T  32975909 ataagtgtttatgtataagttatttctgtaacaaaatataaaataaagtcaaactgttt 32975967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 2514634 - 2514711
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagttat 182  Q
    |||||| |||||| ||| ||||||||  || |||||||||||||||||||||||  |||||||| || ||||||||||    
T  2514634 taagtgcttatgtataagctatttctataataaaagataaaataaagtcaaactaattttatatgagctataagttat 2514711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 9326916 - 9326965
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagttat 182  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||    
T  9326916 aacaaatgatataataaagtcaaactgtttttatataagctataagttat 9326965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 171
Target Start/End: Complemental strand, 32386268 - 32386171
Alignment:
Q  74 ttaagcacttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    |||||||||||||||||||  | | || | ||||||| |||||| ||| |||||||    | ||||||||||||||||| ||||||||||||||||||    
T  32386268 ttaagcacttatagtataaaagtttatcatataagtgcttatgtataagctatttcacttagaaaagataaaataaagtaaaactgtttttatataag 32386171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 176
Target Start/End: Complemental strand, 32386731 - 32386630
Alignment:
Q  75 taagcacttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagtta 174  Q
    |||||||||||||||||| || | || | ||||||| |||||| || ||||||||   || |||||||||||||| |||||| |||||| ||||||| ||    
T  32386731 taagcacttatagtataaatgtttatcatataagtgcttatgtatagactatttcactaagaaaagataaaataaggtcaaattgttttcatataaggta 32386632  T
Q  175 ta 176  Q
    ||    
T  32386631 ta 32386630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 33500615 - 33500546
Alignment:
Q  109 tgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||||| ||| ||||||||  ||||||||||||| |||| |||||||||||  ||||||||||||||    
T  33500615 tgtttatgtataagctatttctataacaaaagataaagtaaaatcaaactgtttcaatataagttataag 33500546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 4006665 - 4006721
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||  |||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  4006665 tatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagtt 4006721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 9027503 - 9027582
Alignment:
Q  99 attaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||| ||||||| |||| | ||| ||||||||  || | |||||||||||||||||||||||||| |||||||| |||||    
T  9027503 attatataagtgcttatctataagctatttctacaatagaagataaaataaagtcaaactgttttaatataagtaataag 9027582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 20672004 - 20671945
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    ||||||| |||||| ||| |||||||| || |||||||||||||||||||||| ||||||    
T  20672004 ataagtgattatgtataagctatttctagatcaaaagataaaataaagtcaaattgtttt 20671945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 164
Target Start/End: Original strand, 24774690 - 24774749
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgttttt 164  Q
    |||||| |||| | ||||||||||||  ||||||| ||||||||||||||||||||||||    
T  24774690 taagtgcttatatataaactatttctataacaaaatataaaataaagtcaaactgttttt 24774749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 33787877 - 33787810
Alignment:
Q  111 tttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||| ||||||||||||  ||||||| |||||| ||||||||| || ||| ||||||||||||||    
T  33787877 tttatgtataaactatttctataacaaaatataaaacaaagtcaaattgatttcatataagttataag 33787810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 171
Target Start/End: Complemental strand, 3217352 - 3217262
Alignment:
Q  81 cttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    ||||||||||||| ||| || | ||||||| |||||| ||| |||||| || || | ||||||||||||||||||| | |||| |||||||    
T  3217352 cttatagtataagcgattatcatataagtgcttatgtataagctatttttgtaagagaagataaaataaagtcaaattattttcatataag 3217262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 9833199 - 9833130
Alignment:
Q  141 ataaaataaagtcaaactgtttttatataagttataagttatcctgaagagcttaagaatataagttgaa 210  Q
    |||||||||||||||||||||||  ||||||  ||||| |||| ||||||||||| | | ||||||||||    
T  9833199 ataaaataaagtcaaactgttttcttataagcaataagctatcatgaagagcttatggaaataagttgaa 9833130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 24836343 - 24836262
Alignment:
Q  99 attaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||| |||||| ||||||| |||  |||||||  |||||||||||||||||||||||| ||||||  |||||  ||||||||    
T  24836343 attatataagtatttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataaactataagtt 24836262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 29274360 - 29274295
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||| ||| ||||||||  | |||||||||||||||||||||| |||||| ||||||| |||||    
T  29274360 ttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataa 29274295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 31420884 - 31420965
Alignment:
Q  99 attaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||| |||||||||||| | ||| ||||||||  || ||| | ||||||||| ||||||| |||||||||||| ||||||||    
T  31420884 attatataagtgtttatttataagctatttctataataaatggtaaaataaaatcaaactatttttatataagatataagtt 31420965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 31672605 - 31672548
Alignment:
Q  106 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    |||||||||||| |||||||||||    |||||| |||||||||||||||||||||||    
T  31672605 aagtgtttatgtataaactatttccatgacaaaaaataaaataaagtcaaactgtttt 31672548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 7479217 - 7479169
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagtta 181  Q
    ||||||||||||| ||| |||||||||| || |||||||||||||||||    
T  7479217 aacaaaagataaagtaaggtcaaactgtcttcatataagttataagtta 7479169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 9582708 - 9582668
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagtt 173  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  9582708 aacaaaagataaaataaagtgaaattgtttttatataagtt 9582668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 323774 - 323813
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatataagttat 175  Q
    ||||||||||||||| |||||||||||| |||||||||||    
T  323774 aaaagataaaataaattcaaactgttttcatataagttat 323813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 1497943 - 1497986
Alignment:
Q  135 caaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||| |||||||||||||||||||||| |||| |||||||||    
T  1497943 caaaaggtaaaataaagtcaaactgttttcatatgagttataag 1497986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 4420555 - 4420606
Alignment:
Q  111 tttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgttt 162  Q
    ||||||| ||| ||| ||||  ||||||||||||||||||||||||||||||    
T  4420555 tttatgtataagctacttctataacaaaagataaaataaagtcaaactgttt 4420606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 13360666 - 13360717
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaa 155  Q
    ||||||| ||||||| |||||||||||  ||||||| |||||||||||||||    
T  13360666 ataagtgcttatgtgcaaactatttctataacaaaatataaaataaagtcaa 13360717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 24782009 - 24782064
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||||  ||||||||||||||| || ||||| |||||| ||||||||||||||    
T  24782009 ctatttctataacaaaagataaaatcaaatcaaattgttttcatataagttataag 24782064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 1402946 - 1403000
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||||||  |||||||||||||||||||| ||||| |||| ||||||| |||||    
T  1402946 ctatttctataacaaaagataaaataaagttaaactattttcatataagctataa 1403000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 5328925 - 5328971
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    |||||||  |||||||||||||||||||||||||  |||||||||||    
T  5328925 tatttctataacaaaagataaaataaagtcaaaccatttttatataa 5328971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 6536971 - 6537025
Alignment:
Q  184 ctgaagagcttaagaatataagttgaagacaacttatcaacatgtcataagttct 238  Q
    |||||||||||| | | ||||| |||| ||||||||| |||||||||||||||||    
T  6536971 ctgaagagcttatggaaataagctgaaaacaacttatgaacatgtcataagttct 6537025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 7713985 - 7714023
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  7713985 aacaaaagataaaataaagtcaaattgttttcatataag 7714023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 7785850 - 7785808
Alignment:
Q  135 caaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||||||||||||||||||||| |||| ||||||| |||||    
T  7785850 caaaagataaaataaagtcaaactcttttcatataagctataa 7785808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 27893978 - 27894044
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    ||||| |||||||| ||| ||||||||  |||| || |||||||||||||||| |||||| ||||||    
T  27893978 ataagggtttatgtataagctatttctacaacagaatataaaataaagtcaaattgttttaatataa 27894044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 33911435 - 33911365
Alignment:
Q  89 ataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactg 159  Q
    ||||||||| || | |||||||||||||| ||| |||||| |  |||||||||| ||||||||| ||||||    
T  33911435 ataagtgattataatataagtgtttatgtataatctatttttataacaaaagatcaaataaagttaaactg 33911365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 281958 - 281913
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||||||||||||||||||  |||||| ||||||| ||||||    
T  281958 aacaaaagataaaataaagtcaacttgttttcatataagctataag 281913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 2027516 - 2027479
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  2027516 aacaaaagataaaataaagtcaaactattttcatataa 2027479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 7354145 - 7354202
Alignment:
Q  114 atgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    |||| ||||||||||||  |||||||||||||||||| || |||| |||| |||||||    
T  7354145 atgtataaactatttctataacaaaagataaaataaaatcgaactattttcatataag 7354202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 22691652 - 22691586
Alignment:
Q  109 tgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||||||||||| |||||| || |||||  ||||| ||||| ||||| |||||| |||||||||||||    
T  22691652 tgtttatgtgtaagctatttttgtaacaa--gataacataaattcaaattgttttcatataagttataa 22691586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 22742326 - 22742371
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||| ||||||||||||||||| |||||| ||||||| ||||||    
T  22742326 aacaaaggataaaataaagtcaaattgttttcatataagctataag 22742371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 27857335 - 27857364
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgttt 162  Q
    ||||||||||||||||||||||||||||||    
T  27857335 aacaaaagataaaataaagtcaaactgttt 27857364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 30865432 - 30865469
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgt 160  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  30865432 ctatttctataacaaaagataaaataaagtcaaactgt 30865469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 507154 - 507218
Alignment:
Q  107 agtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    |||| |||||| |||| |||||||  |||||||||||||||||||| | | ||||||| ||||||    
T  507154 agtgcttatgtataaattatttctataacaaaagataaaataaagttagattgtttttgtataag 507218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 3181177 - 3181141
Alignment:
Q  134 acaaaagataaaataaagtcaaactgtttttatataa 170  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  3181177 acaaaagataaaataaagtcaaaccgttttcatataa 3181141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 3204666 - 3204614
Alignment:
Q  119 taaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    ||||||| ||||  || |||||||||||||||||| ||||||||| |||||||    
T  3204666 taaactacttctataataaaagataaaataaagtcgaactgttttcatataag 3204614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 4247190 - 4247126
Alignment:
Q  114 atgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||| ||||||||  |||||||||||||||| |||    ||||||| ||||||||||||||    
T  4247190 atgtgtaagctatttctataacaaaagataaaatagagttggtctgttttcatataagttataag 4247126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 4420607 - 4420643
Alignment:
Q  135 caaaagataaaataaagtcaaactgtttttatataag 171  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  4420607 caaaagataaaataaagtcaaactatttttgtataag 4420643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 24670368 - 24670424
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||| |||||||  |||||||||||| |||||||||| |||||| | ||||||    
T  24670368 tatttctgtaacaaaaagtaaaataaagtccaactgtttttttataagctttaagtt 24670424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 29269842 - 29269886
Alignment:
Q  119 taaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||    
T  29269842 taaactatttctataacagaagataaaataaagtcaaattgtttt 29269886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 32848698 - 32848662
Alignment:
Q  141 ataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  32848698 ataaaataaagtcaatctgttttcatataagttataa 32848662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 33068702 - 33068626
Alignment:
Q  102 aaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||| || |||||| |||  |||||||  |||||||||||||||||  |||||||||||| | ||||| ||||||    
T  33068702 aaataaatgcttatgtataagttatttctataacaaaagataaaataatatcaaactgttttcaaataagatataag 33068626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 34405036 - 34405096
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgttttt 164  Q
    |||||||||||| | ||| ||||||||  || ||||| ||||||||||||||| |||||||    
T  34405036 ataagtgtttatctataagctatttctataataaaagttaaaataaagtcaaattgttttt 34405096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 10143102 - 10143179
Alignment:
Q  103 aataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||| |||||| |||  |||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  10143102 aataagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtt 10143179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 37053525 - 37053601
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||| |||||| || |||||||||  |||| || ||||||||||||||||||||||| ||||||||||||||||    
T  37053525 ataagtgcttatgtatagactatttctataacagaaaataaaataaagtcaaactgttttcatataagttataagtt 37053601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 33192140 - 33192197
Alignment:
Q  120 aaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||||||||  |||| |||||||||||||||||||||||||| |||||||||||||    
T  33192140 aaactatttctataacataagataaaataaagtcaaactgttttcatataagttataa 33192197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 14666508 - 14666555
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  14666508 aacaaaagataaaataaagtcaaactgatttcatataagttataagtt 14666555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 5133711 - 5133777
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||| ||| ||||||||  |||||||||||||||||||  |||||||||||||||||| ||||||    
T  5133711 ttatgtataagctatttctataacaaaagataaaataaagataaactgtttttatataagatataag 5133777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 170
Target Start/End: Original strand, 13866828 - 13866886
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    |||||| ||||||||||||  | ||||||||||||| ||||||||||||||||||||||    
T  13866828 ttatgtataaactatttctatagcaaaagataaaattaagtcaaactgtttttatataa 13866886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 11513858 - 11513905
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  11513858 aacaaaagataaaataaagtcaaattgttttcatataagctataagtt 11513905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 14209208 - 14209275
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    |||||||||| ||| ||| |||||||   |||||||||||||||||| |||||||||||| |||||||    
T  14209208 ataagtgtttctgtctaagctatttcaataacaaaagataaaataaattcaaactgttttcatataag 14209275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 40145422 - 40145469
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||    
T  40145422 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagtt 40145469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 5045295 - 5045238
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgttt 162  Q
    ||||||||||||| ||| |||||| |  ||||||||||||||||||||||| ||||||    
T  5045295 taagtgtttatgtataagctatttttataacaaaagataaaataaagtcaagctgttt 5045238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 14278033 - 14277960
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtc-aaactgtttttatataagttata 176  Q
    ||||||| |||||| ||||||||||||  ||| ||| || |||||||||| |||||||||| ||||||||||||    
T  14278033 ataagtgcttatgtataaactatttctataactaaacattaaataaagtcaaaactgttttcatataagttata 14277960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 31740079 - 31740022
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||  ||| |||||||||||||||||||||| |||| ||||||| ||||||||    
T  31740079 ctatttctataactaaagataaaataaagtcaaactattttcatataagctataagtt 31740022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 33942112 - 33942157
Alignment:
Q  135 caaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||||||||||||||||||||||| || |||| ||||||||    
T  33942112 caaaagataaaataaagtcaaactgttttcatgtaagctataagtt 33942157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 36863732 - 36863691
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  36863732 aaaagataaaataaagtcaaacaatttttatataagttataa 36863691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 3673758 - 3673814
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||  ||||||| |||||||||||| ||| |||||| ||||||||||||||||    
T  3673758 tatttctataacaaaatataaaataaagttaaattgttttcatataagttataagtt 3673814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 7103588 - 7103548
Alignment:
Q  138 aagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  7103588 aagataaaataaagtcaaactgttttaatataagctataag 7103548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 17952821 - 17952773
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    ||||||||  |||||||||||||||||||||||||| |||| |||||||    
T  17952821 ctatttctataacaaaagataaaataaagtcaaactattttcatataag 17952773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 18962148 - 18962104
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||    
T  18962148 aacaaaagataaaataaagttaaactgttttcatataagctataa 18962104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 30537664 - 30537592
Alignment:
Q  106 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||||| ||||| ||||||||  ||| |||||| | |||||||||||| ||||| ||||||| ||||||    
T  30537664 aagtgtttatatgtaagctatttctataactaaagatcatataaagtcaaacagttttcatataagctataag 30537592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 32694151 - 32694219
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||| ||| ||||||||  | |||||||||||||||| ||| ||| ||||||||||| |||||||||    
T  32694151 ttatgtataagctatttctatatcaaaagataaaataaaatcagactatttttatataatttataagtt 32694219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 41852013 - 41851969
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||    
T  41852013 aacaaaagataaaattaagtcaaattgttttcatataagttataa 41851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 1742156 - 1742097
Alignment:
Q  119 taaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||||||||  ||||||| ||||||| |||||||||| ||| |||||||| ||||||    
T  1742156 taaactatttctataacaaaatataaaatgaagtcaaactctttatatataagatataag 1742097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 5043666 - 5043623
Alignment:
Q  137 aaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||||||||||||||||||||| ||||||| || |||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataagctagaagtt 5043623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 6546938 - 6546981
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttata 176  Q
    |||||||||||||||||||||||| ||||| |||||||| ||||    
T  6546938 aacaaaagataaaataaagtcaaattgtttatatataagctata 6546981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 28803616 - 28803569
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||||||||||||||||||||| ||| ||||||| || |||||    
T  28803616 aacaaaagataaaataaagtcaaactgatttcatataagctacaagtt 28803569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 38239689 - 38239638
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaa 156  Q
    ||||||||||||| ||| ||||||||  ||||||||||||||| ||||||||    
T  38239689 taagtgtttatgtataagctatttctataacaaaagataaaatcaagtcaaa 38239638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 39929827 - 39929874
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||||||||| || ||||| |||||||||||||| ||||||||    
T  39929827 aacaaaagataaaatcaaatcaaattgtttttatataagctataagtt 39929874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 44438965 - 44438918
Alignment:
Q  117 tgtaaactatttctggaacaaaagataaaataaagtcaaactgttttt 164  Q
    ||||| ||||||| | | ||||||||||||||||||||||||||||||    
T  44438965 tgtaagctatttccgtagcaaaagataaaataaagtcaaactgttttt 44438918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 3423905 - 3423831
Alignment:
Q  106 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||||| |||  ||||| || | |||||||||||||||||||||| | |||| ||||||  ||||||||    
T  3423905 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 3423831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 3458617 - 3458655
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  3458617 aacaaaagataaaataaagtcaaacttttttcatataag 3458655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 153
Target Start/End: Original strand, 12215741 - 12215787
Alignment:
Q  107 agtgtttatgtgtaaactatttctggaacaaaagataaaataaagtc 153  Q
    |||| |||||| ||||||||||||  |||||||||||||||||||||    
T  12215741 agtgcttatgtataaactatttctacaacaaaagataaaataaagtc 12215787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 29429866 - 29429824
Alignment:
Q  134 acaaaagataaaataaagtcaaactgtttttatataagttata 176  Q
    |||||||||||||||||||||||||||||| | ||||| ||||    
T  29429866 acaaaagataaaataaagtcaaactgttttcacataagctata 29429824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 33944555 - 33944609
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||||| ||| |||| |||||||||||||||| |||||| ||||||| |||||    
T  33944555 ctatttcttgaataaaatataaaataaagtcaaattgttttcatataagctataa 33944609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 34055040 - 34054982
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgttt 162  Q
    ||||||| |||||| ||  ||||||||  ||||||||||||||||||| ||||||||||    
T  34055040 ataagtgcttatgtataggctatttctataacaaaagataaaataaaggcaaactgttt 34054982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 35329958 - 35329884
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||||||||  |||||||||||   |||| |||||||||||||||||| ||| ||| | ||||| ||||||    
T  35329958 ataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 35329884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 35539686 - 35539728
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||    
T  35539686 aaaagataaaataaaatcaaactattttcatataagttataag 35539728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 2416245 - 2416318
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||| |||||| |||  |||||||| | ||||||||||||| |||| ||| |||||| ||||||| ||||||    
T  2416245 taagtgcttatgtataagttatttctgtagcaaaagataaaatgaagttaaattgttttgatataagctataag 2416318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 9878802 - 9878745
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||  |||||||||||||||||| ||||||| |||||| ||| | ||||||||    
T  9878802 ctatttctataacaaaagataaaataaactcaaactatttttacatatgctataagtt 9878745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 13864581 - 13864630
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtc 153  Q
    |||||||||||||| ||| ||||||||  |||||||| ||||||||||||    
T  13864581 ataagtgtttatgtataagctatttctataacaaaaggtaaaataaagtc 13864630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 33256700 - 33256737
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    ||||| ||||||||||||||||||||||||| ||||||    
T  33256700 aacaatagataaaataaagtcaaactgttttcatataa 33256737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 35713154 - 35713215
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgttttta 165  Q
    |||||||||||||| ||||||||||| | ||||||| | ||| | ||| |||||||||||||    
T  35713154 ataagtgtttatgtataaactatttccgtaacaaaaaagaaagttaaggcaaactgttttta 35713215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 37033983 - 37034028
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaac 157  Q
    |||||| ||||||||||||  || ||||||||||||||||||||||    
T  37033983 ttatgtataaactatttctataaaaaaagataaaataaagtcaaac 37034028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 37474688 - 37474753
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    ||||||||||||  |||||||||||   ||||||| ||||||||||||| | ||||||| ||||||    
T  37474688 taagtgtttatgcataaactatttcgataacaaaaaataaaataaagtcgatctgttttcatataa 37474753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 43299513 - 43299476
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  43299513 aacagaagataaaataaagtcaaactgtttttgtataa 43299476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 9478230 - 9478302
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttata 176  Q
    |||||||||||||| ||| ||||||||  ||||  |||||||||||| ||||| | |||| ||||||| ||||    
T  9478230 ataagtgtttatgtataagctatttctataacagtagataaaataaactcaaaatattttcatataagctata 9478302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 10190180 - 10190256
Alignment:
Q  74 ttaagcacttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaa 150  Q
    ||||||||||||||||  |||| | || | ||||||| |||||| |||||||||| |  |||||| |||||||||||    
T  10190180 ttaagcacttatagtaggagtggttatcatataagtgcttatgtataaactatttttataacaaaggataaaataaa 10190256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 15370466 - 15370422
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||| |||||||||||||||||||||| |||| |||| |||||    
T  15370466 aacaaacgataaaataaagtcaaactgttcttatttaagctataa 15370422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 25609727 - 25609803
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||| |||||| ||| ||||||||  || ||||||||||||||||||||  | ||||  |||||| ||||||||    
T  25609727 ataagtgcttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagctataagtt 25609803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 29430693 - 29430760
Alignment:
Q  110 gtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||| ||| ||||||||  |||||||| |||| |||||||||||||||||  |||||| ||||||    
T  29430693 gtttatgtataagctatttctataacaaaagttaaa-taaagtcaaactgttttcttataagctataag 29430760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 31228925 - 31228885
Alignment:
Q  135 caaaagataaaataaagtcaaactgtttttatataagttat 175  Q
    ||||||||||||||||| |||| |||||| |||||||||||    
T  31228925 caaaagataaaataaaggcaaattgttttcatataagttat 31228885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 31461369 - 31461421
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaa 156  Q
    ||||||| |||| | ||| ||||||||  ||||||||||||||||||||||||    
T  31461369 ataagtggttatatataagctatttctataacaaaagataaaataaagtcaaa 31461421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 32098428 - 32098388
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    ||||||||  |||||||||||||||||||||||| ||||||    
T  32098428 ctatttctataacaaaagataaaataaagtcaaagtgtttt 32098388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 35755641 - 35755565
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||||||| ||| ||||||||  ||  ||| | |||||||||||||| |||||| || |||| ||||||||    
T  35755641 ataagtgtttatgtataagctatttctataatcaaatagaaaataaagtcaaattgttttcatgtaagctataagtt 35755565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 36114662 - 36114586
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||| |||||  ||| ||| ||||  |||||||||||||||||||| ||| ||||||| ||||||  |||||||    
T  36114662 ataagtgcttatgcataacctagttctataacaaaagataaaataaagttaaattgtttttgtataagcaataagtt 36114586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 44439470 - 44439426
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||||| |||||||||||| ||||||||||| |||||| |||||    
T  44439470 aacaaaatataaaataaagttaaactgtttttgtataagctataa 44439426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 15360827 - 15360901
Alignment:
Q  106 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||||| | |  |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  15360827 aagtgtttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagtt 15360901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 234
Target Start/End: Original strand, 27140417 - 27140552
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag------ttataagttatcctgaagagcttaaga 198  Q
    |||||||||||||||||  |||||||  |||||||||||||||||  | ||| ||||||||||||||      ||||||| |||| || |||||||| |     
T  27140417 taagtgtttatgtgtaagttatttctataacaaaagataaaataatattaaattgtttttatataagctgtttttataagctatcatggagagcttatgc 27140516  T
Q  199 atataagttgaagacaacttatcaacatgtcataag 234  Q
    | ||||| |||| |||||||||  ||||||||||||    
T  27140517 aaataagctgaaaacaacttatggacatgtcataag 27140552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 51190823 - 51190898
Alignment:
Q  135 caaaagataaaataaagtcaaactgtttttatataagttataagttatcctgaagagcttaagaatataagttgaa 210  Q
    |||||||||||||||||| ||| ||||||| ||||||||||||| |||| |||||| |||| ||| ||||| ||||    
T  51190823 caaaagataaaataaagttaaattgtttttgtataagttataagctatcttgaagaacttatgaaaataagctgaa 51190898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 162
Target Start/End: Complemental strand, 43029575 - 43029482
Alignment:
Q  68 atttagttaagcacttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgttt 162  Q
    ||||| |||||||||| ||| ||||||||| || | || |||| |||||| ||| ||||||||  |||||||||||||||||| |||||||||||    
T  43029575 atttaattaagcacttttagcataagtgattat-atatgagtgcttatgtataacctatttctacaacaaaagataaaataaattcaaactgttt 43029482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 40833941 - 40833896
Alignment:
Q  137 aaagataaaataaagtcaaactgtttttatataagttataagttat 182  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||    
T  40833941 aaagataaaataaaatcaaactgtttttatataagctataagttat 40833896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 4338555 - 4338639
Alignment:
Q  80 acttatagtataagtgataattaaataagtg-tttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    |||||||||||||||| | || | ||||||| ||||||| |||  ||| ||| ||||| ||||||||||||||||||||||||||    
T  4338555 acttatagtataagtgtttatcatataagtgctttatgtataagttatgtctagaacagaagataaaataaagtcaaactgtttt 4338639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 233
Target Start/End: Original strand, 47877082 - 47877182
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagttatcctgaagagcttaagaatataagttgaagacaacttatcaacatgtcata 232  Q
    |||||||||||||||||| ||||| |||||| ||||||  |||||| |||  || | |||||| ||| ||||| |||| ||||||||| | |||||||||    
T  47877082 aacaaaagataaaataaaatcaaattgttttcatataaactataagctattatggaaagcttatgaaaataagctgaaaacaacttatgagcatgtcata 47877181  T
Q  233 a 233  Q
    |    
T  47877182 a 47877182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 4548651 - 4548726
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaa-gataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||| | |||| || ||||||| || ||||||| |||||||||||||||||||||||||||| |||| |||||    
T  4548651 ataagtgctcatgtatagactatttttgtaacaaaaagataaaataaagtcaaactgtttttatacaagtcataag 4548726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 40943494 - 40943447
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||    
T  40943494 aacaaaagataaaataaagtcaaactgtttaattataagttataagtt 40943447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 195
Target Start/End: Complemental strand, 44936709 - 44936638
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagttatcctgaagagctta 195  Q
    |||||||  |||||||||||| ||||||||||||| |||| ||||||| |||||  |||| |||||||||||    
T  44936709 tatttctataacaaaagataagataaagtcaaactattttcatataagctataatctatcttgaagagctta 44936638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 5276321 - 5276371
Alignment:
Q  188 agagcttaagaatataagttgaagacaacttatcaacatgtcataagttct 238  Q
    |||||||||||| |||| ||||| ||||||||| |||||||||||||||||    
T  5276321 agagcttaagaaaataacttgaaaacaacttatgaacatgtcataagttct 5276371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 36151637 - 36151571
Alignment:
Q  111 tttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||||| ||| |||||||   |||||||||||||||||||||||| ||||||  ||||||||||||    
T  36151637 tttatgtataagctatttcaataacaaaagataaaataaagtcaaattgttttcgtataagttataa 36151571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 46980237 - 46980195
Alignment:
Q  135 caaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  46980237 caaaagataaaataaagacaaactgttttcatataagttataa 46980195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 43420222 - 43420267
Alignment:
Q  137 aaagataaaataaagtcaaactgtttttatataagttataagttat 182  Q
    |||||||||||||||||||||| ||||||||||||||  |||||||    
T  43420222 aaagataaaataaagtcaaactttttttatataagttgcaagttat 43420267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 44032138 - 44032065
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||||||||||| ||| |  |||||  |||||||| ||||||||||||||| |||||| ||||||| |||||    
T  44032138 ataagtgtttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataa 44032065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 45999427 - 45999354
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||||| | |||| ||| ||||||||  |||||||||||| |||||||||||||| ||| ||||||| |||||    
T  45999427 ataagtgctcatgtataagctatttctataacaaaagataagataaagtcaaactgctttcatataagctataa 45999354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 48064271 - 48064316
Alignment:
Q  135 caaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||    
T  48064271 caaaagataaaataaagtaaaactatttttgtataagttataagtt 48064316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 50998491 - 50998615
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagttatcctgaagagcttaagaatataagttgaag 211  Q
    |||||| ||| ||||||||| |||||||||||||| ||| |||||||  ||| ||||||| |||| | ||||||| | |||||| ||| ||||| ||||     
T  50998491 ttatgtataagctatttctgtaacaaaagataaaacaaaatcaaactactttcatataagctataggctatcctg-atagcttatgaaaataagctgaaa 50998589  T
Q  212 acaactta-tcaacatgtcataagtt 236  Q
    || | ||| | |||||||||||||||    
T  50998590 accatttattaaacatgtcataagtt 50998615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 2522582 - 2522634
Alignment:
Q  119 taaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    ||||||||||   ||||||||||||||||||||| |||||| |||||||||||    
T  2522582 taaactatttacagaacaaaagataaaataaagttaaactgattttatataag 2522634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 17269181 - 17269257
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||| |||||| |||  ||||||| |||||||||  |||||||||||||| |||||| |||||||  |||||||    
T  17269181 ataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagtt 17269257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 27738290 - 27738246
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||||||||||||||||||||| |||||| ||||||| |||||    
T  27738290 aacaaaagataaaataaagtcaaattgttttcatataagctataa 27738246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 40304223 - 40304119
Alignment:
Q  74 ttaagcacttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagtt 173  Q
    ||||||||||||||| |||||| | || | || | || ||| || ||| |||||| |  |||||||||||||||||| ||| | |||||| |||||||||    
T  40304223 ttaagcacttatagtgtaagtgtttatcatattattgcttaggtataagctatttatataacaaaagataaaataaaatcacattgttttcatataagtt 40304124  T
Q  174 ataag 178  Q
    |||||    
T  40304123 ataag 40304119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 15361644 - 15361718
Alignment:
Q  106 aagtgtttatgtgtaaactatttctggaacaa--aagataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||| |||||||||||||||||||  |||||  |||||||| |||||||||| | |||| ||||||| ||||||    
T  15361644 aagtgcttatgtgtaaactatttctataacaaagaagataaagtaaagtcaaattattttcatataagctataag 15361718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 28788648 - 28788605
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttata 176  Q
    |||||| |||||||||||||||||||||||| ||||||| ||||    
T  28788648 aacaaaggataaaataaagtcaaactgttttcatataagctata 28788605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 30259607 - 30259552
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    ||||||||  ||||||| ||||||||||||||||||| ||| ||||||| ||||||    
T  30259607 ctatttctataacaaaatataaaataaagtcaaactgctttgatataagctataag 30259552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 30371108 - 30371155
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||||||||||| ||||| |||||| ||||||| ||||||||    
T  30371108 aacaaaagataaaataaactcaaattgttttcatataagctataagtt 30371155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 33527267 - 33527220
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    ||||||||  |||||||||||||||| |||||||||||||| ||||||    
T  33527267 ctatttctaaaacaaaagataaaatacagtcaaactgttttcatataa 33527220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 46499993 - 46499926
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    ||||||| |||| | ||| ||||||||  || ||||||||||||||||||||| ||||||||| ||||    
T  46499993 ataagtgcttatctataagctatttctataagaaaagataaaataaagtcaaattgtttttatttaag 46499926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 4276760 - 4276702
Alignment:
Q  119 taaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||||||||||  |||||||||||| ||||||||| |||||||| | ||||| |||||    
T  4276760 taaactatttctataacaaaagataatataaagtcatactgttttcacataagctataa 4276702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 6262702 - 6262744
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||||||| |||||||||| |||||||||||| ||||||    
T  6262702 aaaagataaaatcaagtcaaactatttttatataagctataag 6262744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 153
Target Start/End: Complemental strand, 39348111 - 39348057
Alignment:
Q  99 attaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtc 153  Q
    |||| ||||||  |||||| ||||||| ||||| |||||||||||||||||||||    
T  39348111 attatataagttcttatgtataaactaattctgcaacaaaagataaaataaagtc 39348057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 42352036 - 42351986
Alignment:
Q  113 tatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    ||||||||| ||||||||  |||||||| ||||||||||||||||| ||||    
T  42352036 tatgtgtaatctatttctataacaaaagttaaaataaagtcaaactatttt 42351986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 45769882 - 45769836
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaa 150  Q
    ||||||| ||||||||||| |||||||  ||||||||||||||||||    
T  45769882 ataagtgcttatgtgtaaattatttctataacaaaagataaaataaa 45769836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 47003013 - 47002943
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagtta 174  Q
    |||||||||||||  |||| ||||||   || ||||||||||||||||| ||| |||||||||| ||||||    
T  47003013 ataagtgtttatgcataaattatttcgataataaaagataaaataaagttaaattgtttttatacaagtta 47002943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 49517021 - 49517075
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||  |||||||||||||||||||||||| |||||| || |||| ||||||    
T  49517021 tatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataag 49517075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 781226 - 781185
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||| ||||||||||| |||||||||| |||||||||||||    
T  781226 aaaaggtaaaataaagtgaaactgttttcatataagttataa 781185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 3062960 - 3062997
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataa 170  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  3062960 aacaaaagataaaataatgtcaaattgtttttatataa 3062997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 5083051 - 5083084
Alignment:
Q  125 atttctggaacaaaagataaaataaagtcaaact 158  Q
    ||||||| ||||||||||||||||||||||||||    
T  5083051 atttctgtaacaaaagataaaataaagtcaaact 5083084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 5160342 - 5160411
Alignment:
Q  106 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||||||| ||| ||||||||  ||||| | ||||  ||||||||||||| ||||||||||||||||||    
T  5160342 aagtgtttatgtataagctatttctataacaacatataa--taaagtcaaactg-ttttatataagttataag 5160411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 7274049 - 7274004
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataag 178  Q
    |||||||||| ||||||||||||| |||||| ||| ||||||||||    
T  7274049 aacaaaagatgaaataaagtcaaattgttttcatacaagttataag 7274004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 18420974 - 18420921
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgtttttatataagttata 176  Q
    |||||||| | ||||||||||||||||||||||| |||| | ||||||| ||||    
T  18420974 ctatttctagcacaaaagataaaataaagtcaaaatgttctcatataagctata 18420921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 23895275 - 23895324
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtt 161  Q
    |||||| ||| ||||||||  |||||||||||||||||| ||||||||||    
T  23895275 ttatgtataagctatttctataacaaaagataaaataaattcaaactgtt 23895324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 29266151 - 29266208
Alignment:
Q  112 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatata 169  Q
    |||||| |||||||||| || ||||||||||||||| | |||||||| |||| |||||    
T  29266151 ttatgtataaactatttatgtaacaaaagataaaatgacgtcaaactcttttcatata 29266208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 30815767 - 30815706
Alignment:
Q  111 tttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagt 172  Q
    ||||||| ||| || |||||  |||||||||||||||||||| ||||| |||| ||||||||    
T  30815767 tttatgtctaagctttttctataacaaaagataaaataaagttaaactattttcatataagt 30815706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 177
Target Start/End: Original strand, 45107554 - 45107626
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    ||||||| |||| | ||| ||||||||  || |||| |||||||||||||||||| |||| |||||||||||||    
T  45107554 ataagtgcttatctataagctatttctataagaaaa-ataaaataaagtcaaactattttcatataagttataa 45107626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 1730825 - 1730900
Alignment:
Q  106 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagttat 182  Q
    ||||| |||||| ||| |||||| |  ||| ||||||||||||||||||||||  ||| || |||||||||||||||    
T  1730825 aagtgcttatgtataagctatttttttaaccaaagataaaataaagtcaaact-atttcatgtaagttataagttat 1730900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 4363742 - 4363698
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||||||| |||||| ||||||||||||| ||||||| |||||    
T  4363742 aacaaaagattaaataatgtcaaactgttttcatataagctataa 4363698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 7218181 - 7218137
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||| ||||||||||||||| |||||| ||||||| ||||||||    
T  7218181 aaaaggtaaaataaagtcaaattgttttcatataagctataagtt 7218137  T

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Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 12477394 - 12477354
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatataagttata 176  Q
    |||||||||||||||||||||||||||| || |||| ||||    
T  12477394 aaaagataaaataaagtcaaactgttttcatgtaagatata 12477354  T

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Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 15488917 - 15488957
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatataagttata 176  Q
    ||||||||| ||||||||||||| |||||||||||| ||||    
T  15488917 aaaagataacataaagtcaaactatttttatataagatata 15488957  T

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Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 17631221 - 17631181
Alignment:
Q  123 ctatttctggaacaaaagataaaataaagtcaaactgtttt 163  Q
    ||||||||  ||||||||||||||||||||| |||||||||    
T  17631221 ctatttctataacaaaagataaaataaagtctaactgtttt 17631181  T

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Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 29007835 - 29007779
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||  ||||||||| ||| |||||||||||| |||| ||||||| ||||||||    
T  29007835 tatttctataacaaaagaaaaattaaagtcaaactattttcatataagctataagtt 29007779  T

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Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 30257646 - 30257690
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||||||||||||||||||||||||  ||||||| | ||||||    
T  30257646 aaaagataaaataaagtcaaactgtttccatataagctttaagtt 30257690  T

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Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 33186096 - 33186020
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||| |||| |||| ||| ||||||||   ||| |||||||||||| ||| || |||||||||| ||||||||||||    
T  33186096 ataaatgttcatgtataagctatttctattacagaagataaaataaggtcgaattgtttttatacaagttataagtt 33186020  T

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Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 34179982 - 34179938
Alignment:
Q  133 aacaaaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||||||||||||||||||||| |||||| || |||| |||||    
T  34179982 aacaaaagataaaataaagtcaaattgttttaatctaagctataa 34179938  T

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Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 38219873 - 38219905
Alignment:
Q  136 aaaagataaaataaagtcaaactgtttttatat 168  Q
    ||||||||||||||||||||| |||||||||||    
T  38219873 aaaagataaaataaagtcaaattgtttttatat 38219905  T

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Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 43333650 - 43333706
Alignment:
Q  124 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||| ||| |||| ||||||||||||| ||||| ||| ||||||| ||||||||    
T  43333650 tatttctagaagaaaatataaaataaagtcgaactggtttcatataagctataagtt 43333706  T

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Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 43954103 - 43954055
Alignment:
Q  172 ttataagttatcctgaagagcttaagaatataagttgaagacaacttat 220  Q
    |||||||||||||||||||||||| | | ||||| |||| |||||||||    
T  43954103 ttataagttatcctgaagagcttatggagataagctgaaaacaacttat 43954055  T

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Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 162
Target Start/End: Complemental strand, 44236700 - 44236612
Alignment:
Q  74 ttaagcacttatagtataagtgataattaaataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgttt 162  Q
    |||||||||||||| ||||||| | || | |||||||||| |||  || ||||| ||  |||||| |||||||||||||  ||||||||    
T  44236700 ttaagcacttatagcataagtgcttatcacataagtgtttgtgtagaagctattcctataacaaatgataaaataaagttgaactgttt 44236612  T

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Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 45990166 - 45990122
Alignment:
Q  135 caaaagataaaataaagtcaaactgtttttatataagttataagt 179  Q
    |||||||||||||||||| ||| |||||| ||||||| |||||||    
T  45990166 caaaagataaaataaagtaaaattgttttcatataagctataagt 45990122  T

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Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 48830182 - 48830142
Alignment:
Q  137 aaagataaaataaagtcaaactgtttttatataagttataa 177  Q
    |||||||||||||||||||||| |||| ||||||| |||||    
T  48830182 aaagataaaataaagtcaaactattttcatataagctataa 48830142  T

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Target: scaffold0590 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 1213 - 1146
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    ||||||| |||||| ||| ||||||||  |||||||||||||||||||||||||| || | |||||||    
T  1213 ataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataag 1146  T

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Target: scaffold0275 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 2762 - 2829
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataag 171  Q
    ||||||| |||||| ||| ||||||||  |||||||||||||||||||||||||| || | |||||||    
T  2762 ataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataag 2829  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 20111 - 20186
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||| |||||| || |||||||||  ||| ||||||||||||||||||||| ||| | ||||||| ||| ||||    
T  20111 taagtgcttatgtatatactatttctataaccaaagataaaataaagtcaaacagttatcatataagctattagtt 20186  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 27508 - 27583
Alignment:
Q  105 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    |||||| |||||| |||  |||||||  |||| ||||||||||||||||||| |||||| ||||||  ||||||||    
T  27508 taagtgcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagtt 27583  T

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Target: scaffold0654 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 6776 - 6700
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||| |||||| ||||||||||||  ||||||| ||||| | |||||||| |||||| ||| | |||| |||||    
T  6776 ataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaaattgttttcatagaggttaaaagtt 6700  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 116695 - 116619
Alignment:
Q  104 ataagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 180  Q
    ||||||| |||||| ||||||||||||  ||||||| ||||| | |||||||| |||||| ||| | |||| |||||    
T  116695 ataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaaattgttttcatagaggttaaaagtt 116619  T

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