View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1851_low_31 (Length: 234)
Name: NF1851_low_31
Description: NF1851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1851_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 41341441 - 41341217
Alignment:
| Q |
13 |
atgaaactattttacggtgtcatctaataagaactattgtcatattatcatgtaaatgagcctttcaacaaagatatg----------------caaatt |
96 |
Q |
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| T |
41341441 |
atgaaactattttacagtgtcatctaataagaactattgtcatattatcatgtaaatgagcctttcaacaaagatatgttggccaatggccaagcaaatt |
41341342 |
T |
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| Q |
97 |
tagagactagataatatgcaaacaaagatattcttaataatgtcattataagaaacaaacctagttatacttggaggggtgtacacgatggtcatggaat |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41341341 |
tagagactagataatatgcaaacaaagatattcttaataatgccattataagaaacaaacctagttatacttggaggggtgtacacgatggtcatggaat |
41341242 |
T |
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| Q |
197 |
gcaacttccactcctaagtggaaac |
221 |
Q |
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|||||||| |||||||||||||||| |
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| T |
41341241 |
gcaacttctactcctaagtggaaac |
41341217 |
T |
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