View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1851_low_6 (Length: 489)

Name: NF1851_low_6
Description: NF1851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1851_low_6
NF1851_low_6
[»] chr4 (37 HSPs)
chr4 (141-489)||(9048954-9049303)
chr4 (1-71)||(9049373-9049447)
chr4 (445-489)||(44596939-44596983)
chr4 (446-489)||(32766794-32766837)
chr4 (446-483)||(3335933-3335970)
chr4 (445-489)||(56156433-56156477)
chr4 (446-489)||(4142550-4142593)
chr4 (446-489)||(6154995-6155038)
chr4 (446-489)||(19853298-19853341)
chr4 (446-489)||(40065980-40066023)
chr4 (446-489)||(53444399-53444442)
chr4 (449-489)||(21686031-21686071)
chr4 (446-486)||(36204166-36204206)
chr4 (446-489)||(2521059-2521102)
chr4 (446-489)||(10496616-10496659)
chr4 (446-489)||(13634395-13634438)
chr4 (446-489)||(17949109-17949152)
chr4 (446-489)||(17952961-17953004)
chr4 (446-489)||(26633457-26633500)
chr4 (446-489)||(36162002-36162045)
chr4 (446-489)||(36700503-36700546)
chr4 (446-489)||(47320199-47320242)
chr4 (446-489)||(53811298-53811341)
chr4 (454-488)||(28857681-28857715)
chr4 (446-488)||(51535507-51535548)
chr4 (445-487)||(52979026-52979068)
chr4 (447-489)||(56040433-56040475)
chr4 (446-483)||(2115357-2115394)
chr4 (446-487)||(8747409-8747450)
chr4 (446-483)||(9284194-9284231)
chr4 (446-483)||(9528646-9528683)
chr4 (446-483)||(25274166-25274203)
chr4 (446-483)||(38706479-38706516)
chr4 (447-483)||(20569540-20569576)
chr4 (446-486)||(43444672-43444712)
chr4 (453-489)||(43853734-43853770)
chr4 (451-483)||(52097690-52097722)
[»] chr8 (26 HSPs)
chr8 (444-489)||(470929-470974)
chr8 (448-489)||(21238049-21238090)
chr8 (446-489)||(40618857-40618900)
chr8 (446-488)||(3673704-3673746)
chr8 (446-486)||(24099041-24099081)
chr8 (446-489)||(3240643-3240686)
chr8 (446-489)||(10377936-10377979)
chr8 (446-489)||(15596937-15596980)
chr8 (446-489)||(17693397-17693440)
chr8 (446-489)||(27498150-27498193)
chr8 (446-489)||(30568105-30568148)
chr8 (446-488)||(28086596-28086638)
chr8 (446-483)||(7883025-7883062)
chr8 (452-489)||(34102529-34102566)
chr8 (445-489)||(23230905-23230949)
chr8 (446-489)||(1236482-1236525)
chr8 (446-489)||(9637193-9637236)
chr8 (446-489)||(19443837-19443880)
chr8 (449-483)||(27746887-27746921)
chr8 (446-483)||(8412306-8412343)
chr8 (446-483)||(14906692-14906729)
chr8 (448-489)||(40211086-40211127)
chr8 (461-489)||(2024892-2024920)
chr8 (461-489)||(10148369-10148397)
chr8 (452-488)||(34610110-34610146)
chr8 (449-489)||(41896789-41896828)
[»] chr7 (28 HSPs)
chr7 (445-489)||(17611656-17611700)
chr7 (446-489)||(1769072-1769115)
chr7 (446-489)||(9976996-9977039)
chr7 (446-489)||(11654073-11654116)
chr7 (446-489)||(28044542-28044585)
chr7 (446-489)||(28407704-28407747)
chr7 (446-489)||(41553222-41553265)
chr7 (446-489)||(48316605-48316648)
chr7 (446-483)||(39328580-39328617)
chr7 (446-486)||(35664922-35664962)
chr7 (446-489)||(12141093-12141136)
chr7 (446-489)||(48061684-48061727)
chr7 (446-484)||(4999804-4999842)
chr7 (446-488)||(11344083-11344125)
chr7 (446-480)||(11738646-11738680)
chr7 (446-484)||(23425142-23425180)
chr7 (446-488)||(24610045-24610087)
chr7 (449-483)||(24770521-24770555)
chr7 (440-489)||(2623025-2623073)
chr7 (453-486)||(5348391-5348424)
chr7 (446-483)||(21266663-21266700)
chr7 (446-483)||(26492636-26492673)
chr7 (446-483)||(32521698-32521735)
chr7 (446-483)||(42066831-42066868)
chr7 (440-489)||(48643466-48643514)
chr7 (446-486)||(6559145-6559185)
chr7 (445-485)||(38880398-38880438)
chr7 (453-489)||(46822525-46822561)
[»] chr6 (21 HSPs)
chr6 (446-489)||(31851667-31851710)
chr6 (446-489)||(7514989-7515032)
chr6 (446-489)||(31297080-31297123)
chr6 (446-489)||(32327006-32327049)
chr6 (450-489)||(33052958-33052997)
chr6 (447-489)||(29744496-29744538)
chr6 (447-488)||(32060138-32060179)
chr6 (440-489)||(34018821-34018870)
chr6 (446-489)||(606465-606508)
chr6 (446-489)||(3913360-3913403)
chr6 (446-489)||(9341437-9341480)
chr6 (446-489)||(19164825-19164868)
chr6 (446-488)||(14174857-14174899)
chr6 (446-488)||(14179393-14179435)
chr6 (446-484)||(29319663-29319701)
chr6 (446-483)||(3173981-3174018)
chr6 (446-483)||(8497239-8497276)
chr6 (452-489)||(12170729-12170766)
chr6 (446-483)||(23947086-23947123)
chr6 (446-486)||(4088728-4088768)
chr6 (452-488)||(31575348-31575384)
[»] chr5 (26 HSPs)
chr5 (446-489)||(8984775-8984818)
chr5 (446-489)||(10332334-10332377)
chr5 (446-489)||(13007488-13007531)
chr5 (446-489)||(6011924-6011967)
chr5 (446-489)||(8087999-8088042)
chr5 (446-489)||(9113511-9113554)
chr5 (446-489)||(38007616-38007659)
chr5 (445-487)||(10723022-10723064)
chr5 (447-489)||(27576155-27576197)
chr5 (446-483)||(7886709-7886746)
chr5 (449-489)||(13422191-13422231)
chr5 (449-489)||(14726250-14726290)
chr5 (440-489)||(31391548-31391599)
chr5 (454-489)||(4771115-4771150)
chr5 (446-489)||(24229570-24229613)
chr5 (446-489)||(26825689-26825732)
chr5 (446-488)||(6217158-6217200)
chr5 (446-488)||(39326670-39326712)
chr5 (446-487)||(177749-177790)
chr5 (452-489)||(7930413-7930450)
chr5 (446-483)||(21060052-21060089)
chr5 (446-483)||(30371894-30371931)
chr5 (446-483)||(34881990-34882027)
chr5 (446-483)||(43008084-43008121)
chr5 (445-485)||(6639418-6639458)
chr5 (446-486)||(28662485-28662524)
[»] chr2 (46 HSPs)
chr2 (446-489)||(37876393-37876436)
chr2 (446-489)||(37994553-37994596)
chr2 (447-489)||(41328009-41328051)
chr2 (446-489)||(4779023-4779066)
chr2 (446-489)||(5427656-5427699)
chr2 (446-489)||(32448404-32448447)
chr2 (446-489)||(33923975-33924018)
chr2 (446-488)||(24588005-24588047)
chr2 (446-488)||(29279352-29279394)
chr2 (446-483)||(18763744-18763781)
chr2 (446-486)||(26025265-26025305)
chr2 (440-488)||(36324124-36324172)
chr2 (446-489)||(1415827-1415870)
chr2 (446-489)||(4100600-4100643)
chr2 (446-489)||(4903932-4903975)
chr2 (449-488)||(7646749-7646788)
chr2 (448-483)||(9374334-9374369)
chr2 (446-489)||(10929934-10929977)
chr2 (446-489)||(11189412-11189455)
chr2 (446-489)||(12553956-12553999)
chr2 (446-489)||(14955810-14955853)
chr2 (446-489)||(19062135-19062178)
chr2 (446-489)||(24461709-24461752)
chr2 (446-489)||(31193123-31193166)
chr2 (450-489)||(31788726-31788765)
chr2 (446-485)||(34128460-34128499)
chr2 (456-487)||(37416992-37417023)
chr2 (446-489)||(37613895-37613938)
chr2 (446-489)||(38445436-38445479)
chr2 (447-489)||(25508856-25508898)
chr2 (449-483)||(36942912-36942946)
chr2 (446-480)||(42017678-42017712)
chr2 (446-483)||(2808242-2808279)
chr2 (446-483)||(4193112-4193149)
chr2 (446-483)||(12677238-12677275)
chr2 (446-483)||(22422003-22422040)
chr2 (446-483)||(25087310-25087347)
chr2 (446-483)||(27248920-27248957)
chr2 (452-489)||(30923250-30923287)
chr2 (446-483)||(31580424-31580461)
chr2 (446-483)||(33585522-33585559)
chr2 (446-483)||(33759971-33760008)
chr2 (446-483)||(36234273-36234310)
chr2 (449-481)||(27097206-27097238)
chr2 (461-489)||(28261565-28261593)
chr2 (453-489)||(35220598-35220634)
[»] chr1 (34 HSPs)
chr1 (446-489)||(27456752-27456795)
chr1 (446-489)||(47133165-47133208)
chr1 (446-487)||(32678930-32678971)
chr1 (448-488)||(50377587-50377627)
chr1 (446-489)||(5984079-5984122)
chr1 (446-489)||(26535599-26535642)
chr1 (446-489)||(34878064-34878107)
chr1 (446-489)||(49504381-49504424)
chr1 (446-488)||(39888446-39888488)
chr1 (445-489)||(44915902-44915946)
chr1 (450-485)||(5685686-5685721)
chr1 (446-481)||(8211093-8211128)
chr1 (446-489)||(12635432-12635475)
chr1 (446-489)||(21687641-21687684)
chr1 (446-489)||(32395260-32395303)
chr1 (446-489)||(33486681-33486724)
chr1 (446-489)||(36894194-36894237)
chr1 (446-489)||(40163216-40163259)
chr1 (446-489)||(41081473-41081516)
chr1 (446-480)||(1742563-1742597)
chr1 (446-488)||(39987688-39987730)
chr1 (449-486)||(5601025-5601062)
chr1 (446-483)||(9686974-9687011)
chr1 (452-489)||(11462274-11462311)
chr1 (446-483)||(20266577-20266614)
chr1 (446-483)||(30712078-30712115)
chr1 (446-483)||(30879350-30879387)
chr1 (446-483)||(48217712-48217749)
chr1 (446-486)||(9172762-9172802)
chr1 (446-486)||(9180744-9180784)
chr1 (446-486)||(38520304-38520344)
chr1 (461-489)||(42491302-42491330)
chr1 (446-486)||(45425836-45425875)
chr1 (446-486)||(45789815-45789855)
[»] chr3 (43 HSPs)
chr3 (446-487)||(21313297-21313338)
chr3 (446-489)||(628710-628753)
chr3 (446-489)||(6954482-6954525)
chr3 (446-489)||(20464751-20464794)
chr3 (446-489)||(23799734-23799777)
chr3 (446-489)||(43017147-43017190)
chr3 (446-489)||(46304307-46304350)
chr3 (446-489)||(47896410-47896453)
chr3 (446-489)||(52922903-52922946)
chr3 (446-488)||(9797320-9797362)
chr3 (440-489)||(105696-105744)
chr3 (452-489)||(14859754-14859791)
chr3 (446-486)||(17238070-17238110)
chr3 (446-486)||(20608684-20608724)
chr3 (446-489)||(10229735-10229778)
chr3 (446-489)||(21533595-21533638)
chr3 (446-489)||(26715908-26715951)
chr3 (446-489)||(31271618-31271661)
chr3 (446-489)||(35175662-35175705)
chr3 (446-489)||(36461223-36461266)
chr3 (446-489)||(36910552-36910595)
chr3 (446-489)||(38546058-38546101)
chr3 (446-489)||(40487584-40487627)
chr3 (446-489)||(47041834-47041877)
chr3 (446-489)||(48401525-48401568)
chr3 (446-489)||(50981119-50981162)
chr3 (446-489)||(51084253-51084296)
chr3 (447-489)||(10108495-10108537)
chr3 (447-489)||(10233329-10233371)
chr3 (447-489)||(41818485-41818527)
chr3 (447-489)||(46979770-46979812)
chr3 (446-487)||(953331-953372)
chr3 (446-483)||(2342716-2342753)
chr3 (446-483)||(4178833-4178870)
chr3 (446-483)||(12050434-12050471)
chr3 (452-489)||(24396291-24396328)
chr3 (446-483)||(25162704-25162741)
chr3 (446-483)||(25850066-25850103)
chr3 (446-483)||(38854808-38854845)
chr3 (446-483)||(40556967-40557004)
chr3 (449-489)||(3085080-3085120)
chr3 (461-489)||(40883543-40883571)
chr3 (452-484)||(47733369-47733401)
[»] scaffold0603 (1 HSPs)
scaffold0603 (446-489)||(7987-8030)
[»] scaffold0039 (1 HSPs)
scaffold0039 (449-488)||(53190-53229)
[»] scaffold0445 (2 HSPs)
scaffold0445 (446-483)||(1638-1675)
scaffold0445 (446-483)||(1719-1756)
[»] scaffold0021 (1 HSPs)
scaffold0021 (447-488)||(4418-4459)
[»] scaffold0146 (1 HSPs)
scaffold0146 (446-486)||(16089-16129)
[»] scaffold0050 (1 HSPs)
scaffold0050 (446-486)||(65828-65868)
[»] scaffold0136 (1 HSPs)
scaffold0136 (446-489)||(9828-9871)
[»] scaffold0128 (1 HSPs)
scaffold0128 (446-489)||(37091-37134)
[»] scaffold0113 (1 HSPs)
scaffold0113 (446-489)||(36459-36502)
[»] scaffold0015 (1 HSPs)
scaffold0015 (446-489)||(3820-3863)
[»] scaffold0121 (1 HSPs)
scaffold0121 (446-488)||(31060-31102)
[»] scaffold0009 (1 HSPs)
scaffold0009 (452-489)||(57881-57918)


Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 141 - 489
Target Start/End: Complemental strand, 9049303 - 9048954
Alignment:
Q  141 gttaactaagaactaattatgttttctattccatcatcctcttgattgacatgattgtttgtcgttgatgggttaattaagattaatgcatggtttcttc 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  9049303 gttaactaagaactaattatgttttctattccatcatcctcttgattgacatgaatgtttgtcgttgatggcttaattaagattaatgcatggtttcttc 9049204  T
Q  241 tctccatcttcatttgttggttaatatatgtagtaatatagtagaagatctcttgtttannnnnnnnnnnnnncgtaagtatatcttgcttatactcaaa 340  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              |||||||||||||||||||||||| ||    
T  9049203 tctccatcttcatttgttggttaatatatgtagtaatatagtagaagatctcttgtttatttttactttttttcgtaagtatatcttgcttatactc-aa 9049105  T
Q  341 agtcatgaaggatttttgttcttgtc---nnnnnnnnnntgaaggatttttgtttatacnnnnnnnnatgatcgnnnnnnnnntatatatcatattttaa 437  Q
    ||||||||||||||||||||||||||             ||||||||||||||||||||        |||||||         |||||||||||||||||    
T  9049104 agtcatgaaggatttttgttcttgtcaaaaaaaaaaaaatgaaggatttttgtttatacttttttttatgatcg-aaaaaatatatatatcatattttaa 9049006  T
Q  438 tcttatcatttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9049005 tcttatcatttttgacaaaaacaaaacgatattcattcattcaaattgatag 9048954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9049447 - 9049373
Alignment:
Q  1 gcctttcatctagggtttgaaat----gtttagttttgttagcttatatatgactacagaaaatgactgtgttct 71  Q
    |||||||||||||||| ||||||    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9049447 gcctttcatctagggtgtgaaattaatgtttagttttgttagcttatatatgactacagaaaatgactgtgttct 9049373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 445 - 489
Target Start/End: Complemental strand, 44596983 - 44596939
Alignment:
Q  445 atttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  44596983 atttttgacaaaaacaaaacaatattcattaattcaaattgatag 44596939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 32766837 - 32766794
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  32766837 tttttgacaaaaacaaaacaatattcattcattcaaatcgatag 32766794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 3335933 - 3335970
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3335933 tttttgacaaaaacaaaacaatattcattcattcaaat 3335970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 489
Target Start/End: Original strand, 56156433 - 56156477
Alignment:
Q  445 atttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||    
T  56156433 attttttacaaaaacaaaacgatattcattcattcaaattgatag 56156477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 4142550 - 4142593
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  4142550 tttttgacaaaaacaaaacgatattcattcattcaaatcgatag 4142593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 6154995 - 6155038
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  6154995 tttttgacaaaaacaaaatgatattcattcattcaaattgatag 6155038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 19853298 - 19853341
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  19853298 tttttgacaaaaacaaaacgatattcattcattcaaatcgatag 19853341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 40065980 - 40066023
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| |||||||||||||||||||||||||||||||| |||||    
T  40065980 ttttttacaaaaacaaaacaatattcattcattcaaatcgatag 40066023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 53444442 - 53444399
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||||||| ||||||||||||||||||| |||||    
T  53444442 tttttgacaaaaacaaaataatattcattcattcaaatagatag 53444399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 489
Target Start/End: Original strand, 21686031 - 21686071
Alignment:
Q  449 ttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  21686031 ttgacaaaaacaaaacgatattcattcattcaaatcgatag 21686071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 486
Target Start/End: Original strand, 36204166 - 36204206
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattga 486  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  36204166 tttttgacaaaaacaaaacgatattctttcattcaaattga 36204206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 2521102 - 2521059
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||    
T  2521102 ttttttacaaaaacaaaacgatattcattcattcaaatcgatag 2521059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 10496659 - 10496616
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||    
T  10496659 tttttgacaaaattaaaacgatattcattcattcaaattgatag 10496616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 13634438 - 13634395
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||  |||||||||||||||||| |||||    
T  13634438 tttttgacaaaaacaaaatgatattcattcattcaaatcgatag 13634395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 17949109 - 17949152
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||| ||||||||| |||||||||||||||||| |||||    
T  17949109 tttttgacagaaacaaaacgatattcattcattcaaatcgatag 17949152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 17952961 - 17953004
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||| ||||||||| |||||||||||||||||| |||||    
T  17952961 tttttgacagaaacaaaacgatattcattcattcaaatcgatag 17953004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 26633457 - 26633500
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||    
T  26633457 ttttttacaaaaacaaaacgatattcattcattcaaatcgatag 26633500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 36162045 - 36162002
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||    
T  36162045 tttttgacaaaaataaaatgatattcattcattcaaattgatag 36162002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 36700546 - 36700503
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| || ||||| |||||||||||||||||||||||||||||    
T  36700546 ttttttactaaaacgaaacaatattcattcattcaaattgatag 36700503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 47320199 - 47320242
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||  |||||||||||||||||| |||||    
T  47320199 tttttgacaaaaacaaaattatattcattcattcaaatcgatag 47320242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 53811341 - 53811298
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| ||||||||||||| |||| |||||    
T  53811341 tttttgacaaaaacaaaacgatattcattcatttaaatcgatag 53811298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 454 - 488
Target Start/End: Complemental strand, 28857715 - 28857681
Alignment:
Q  454 aaaaacaaaacaatattcattcattcaaattgata 488  Q
    ||||||||||| |||||||||||||||||||||||    
T  28857715 aaaaacaaaacgatattcattcattcaaattgata 28857681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 488
Target Start/End: Complemental strand, 51535548 - 51535507
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    |||| |||||||||||||||||||| |||||||||||||||||    
T  51535548 ttttcgacaaaaacaaaacaatatt-attcattcaaattgata 51535507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 52979068 - 52979026
Alignment:
Q  445 atttttgacaaaaacaaaacaatattcattcattcaaattgat 487  Q
    |||||| ||||||||||||| |||||| |||||||||||||||    
T  52979068 attttttacaaaaacaaaacgatattctttcattcaaattgat 52979026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 447 - 489
Target Start/End: Original strand, 56040433 - 56040475
Alignment:
Q  447 ttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||| ||||||||||||| |||||||||||||||||| |||||    
T  56040433 tttttacaaaaacaaaacgatattcattcattcaaatcgatag 56040475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 2115357 - 2115394
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  2115357 tttttgacaaaaacaaaatgatattcattcattcaaat 2115394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 487
Target Start/End: Original strand, 8747409 - 8747450
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgat 487  Q
    |||||||| ||||  |||||||||||||||||||||||||||    
T  8747409 tttttgactaaaaataaacaatattcattcattcaaattgat 8747450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 9284231 - 9284194
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  9284231 tttttgacaaaaacaaaatgatattcattcattcaaat 9284194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 9528646 - 9528683
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  9528646 tttttgacaaaaacaaaatgatattcattcattcaaat 9528683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 25274203 - 25274166
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  25274203 tttttgacaaaaacaaaatgatattcattcattcaaat 25274166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 38706479 - 38706516
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  38706479 tttttgacaaaaacaaaatcatattcattcattcaaat 38706516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 483
Target Start/End: Complemental strand, 20569576 - 20569540
Alignment:
Q  447 ttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    |||||||||||||||||  ||||||||||||||||||    
T  20569576 ttttgacaaaaacaaaatgatattcattcattcaaat 20569540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 486
Target Start/End: Complemental strand, 43444712 - 43444672
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattga 486  Q
    ||||||||||||| ||||  |||||||||||||||||||||    
T  43444712 tttttgacaaaaataaaatgatattcattcattcaaattga 43444672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 453 - 489
Target Start/End: Complemental strand, 43853770 - 43853734
Alignment:
Q  453 caaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  43853770 caaaaataaaacgatattcattcattcaaattgatag 43853734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 483
Target Start/End: Original strand, 52097690 - 52097722
Alignment:
Q  451 gacaaaaacaaaacaatattcattcattcaaat 483  Q
    |||||||||||||| ||||||||||||||||||    
T  52097690 gacaaaaacaaaacgatattcattcattcaaat 52097722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 444 - 489
Target Start/End: Original strand, 470929 - 470974
Alignment:
Q  444 catttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  470929 catttttgacaaaaacaaaacaatattcattcatttaaattgatag 470974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 448 - 489
Target Start/End: Complemental strand, 21238090 - 21238049
Alignment:
Q  448 tttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  21238090 tttgacaaaaacaaaacaatattcattcattcaaattgatag 21238049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 40618857 - 40618900
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  40618857 tttttgacaaaaacaaaacgatattcattcattcaaattgatag 40618900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 446 - 488
Target Start/End: Complemental strand, 3673746 - 3673704
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  3673746 tttttgacaaaaacaaaacgatattcattcattcaaattgata 3673704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 486
Target Start/End: Original strand, 24099041 - 24099081
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattga 486  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  24099041 tttttgacaaaaacaaaacgatattcattcattcaaattga 24099081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 3240686 - 3240643
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| || |||||||||||||||||||||    
T  3240686 tttttgacaaaaacaaaacgatgttcattcattcaaattgatag 3240643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 10377979 - 10377936
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  10377979 tttttgacaaaaacaaaacgatattcattcattcaaatcgatag 10377936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 15596937 - 15596980
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  15596937 tttttgacgaaaacaaaacgatattcattcattcaaattgatag 15596980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 17693397 - 17693440
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||    
T  17693397 tttttgacaaaaacaaaacgatattcattcactcaaattgatag 17693440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 27498150 - 27498193
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||| |||| |||||||||||||||||||||||||    
T  27498150 tttttgacaaaaataaaataatattcattcattcaaattgatag 27498193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 30568105 - 30568148
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  30568105 tttttgacaaaaacaaaatgatattcattcattcaaattgatag 30568148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 488
Target Start/End: Original strand, 28086596 - 28086638
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  28086596 tttttgacaaaaacaaaacgatattcatttattcaaattgata 28086638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 7883025 - 7883062
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  7883025 tttttgacaaaaacaaaacgatattcattcattcaaat 7883062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 452 - 489
Target Start/End: Complemental strand, 34102566 - 34102529
Alignment:
Q  452 acaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||||||||||||||||||| |||||||    
T  34102566 acaaaaacaaaacaatattcattcattcaagttgatag 34102529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 489
Target Start/End: Complemental strand, 23230949 - 23230905
Alignment:
Q  445 atttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||| |||||| |||||||||||||||||| |||||    
T  23230949 atttttgacaaaagcaaaacgatattcattcattcaaatcgatag 23230905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 1236482 - 1236525
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||  |||||||||||||||||| |||||    
T  1236482 tttttgacaaaaacaaaatgatattcattcattcaaatcgatag 1236525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 9637193 - 9637236
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||    
T  9637193 ttttttacaaaaacaaaacgatattcattcatttaaattgatag 9637236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 19443837 - 19443880
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||||    
T  19443837 ttttttacaaaaataaaacgatattcattcattcaaattgatag 19443880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 449 - 483
Target Start/End: Original strand, 27746887 - 27746921
Alignment:
Q  449 ttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    |||||||||||||||| ||||||||||||||||||    
T  27746887 ttgacaaaaacaaaacgatattcattcattcaaat 27746921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 8412306 - 8412343
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  8412306 tttttgacaaaaataaaacgatattcattcattcaaat 8412343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 14906692 - 14906729
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  14906692 tttttgacaaaaacaaaatgatattcattcattcaaat 14906729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 489
Target Start/End: Original strand, 40211086 - 40211127
Alignment:
Q  448 tttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||| |||||||||||| |||||||||||||||||| |||||    
T  40211086 tttgtcaaaaacaaaacgatattcattcattcaaatcgatag 40211127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 461 - 489
Target Start/End: Original strand, 2024892 - 2024920
Alignment:
Q  461 aaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||||||||||||||||||    
T  2024892 aaacaatattcattcattcaaattgatag 2024920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 461 - 489
Target Start/End: Complemental strand, 10148397 - 10148369
Alignment:
Q  461 aaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||||||||||||||||||    
T  10148397 aaacaatattcattcattcaaattgatag 10148369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 488
Target Start/End: Complemental strand, 34610146 - 34610110
Alignment:
Q  452 acaaaaacaaaacaatattcattcattcaaattgata 488  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  34610146 acaaaaacaaaacgatatttattcattcaaattgata 34610110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 449 - 489
Target Start/End: Complemental strand, 41896828 - 41896789
Alignment:
Q  449 ttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  41896828 ttgacaaaaacaaag-aatattcattcattcaaattgatag 41896789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 445 - 489
Target Start/End: Complemental strand, 17611700 - 17611656
Alignment:
Q  445 atttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  17611700 atttttgacaaaaacaaaacgatattcattcattcaaattgatag 17611656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 1769072 - 1769115
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| | ||||||||||||||||||||||    
T  1769072 tttttgacaaaaacaaaacgacattcattcattcaaattgatag 1769115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 9976996 - 9977039
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  9976996 tttttgacaaaaacaaaacgatattcattcatttaaattgatag 9977039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 11654116 - 11654073
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| |||||| |||||||||||||||||||||||||||||||    
T  11654116 ttttttacaaaagcaaaacaatattcattcattcaaattgatag 11654073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 28044542 - 28044585
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  28044542 tttttgacaaaaacaaaacgatattcattcattcaaatcgatag 28044585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 28407704 - 28407747
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  28407704 tttttgataaaaacaaaacgatattcattcattcaaattgatag 28407747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 41553222 - 41553265
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||    
T  41553222 tttttgacaaaaacaaaacgatattcattcattcaaattaatag 41553265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 48316605 - 48316648
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  48316605 tttttgacaaaaacaaaacgatattcattcattcaaatcgatag 48316648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 39328580 - 39328617
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  39328580 tttttgacaaaaacaaaacgatattcattcattcaaat 39328617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 486
Target Start/End: Original strand, 35664922 - 35664962
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattga 486  Q
    ||||||||||||||||||||||||| ||||||| |||||||    
T  35664922 tttttgacaaaaacaaaacaatatttattcatttaaattga 35664962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 12141093 - 12141136
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||    
T  12141093 ttttttacaaaaacaaaacgatattcattcattcaaatcgatag 12141136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 48061727 - 48061684
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||    
T  48061727 ttttttacaaaaacaaaacgatattcattcattcaaatcgatag 48061684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 484
Target Start/End: Original strand, 4999804 - 4999842
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaatt 484  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  4999804 ttttttacaaaaacaaaacgatattcattcattcaaatt 4999842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 488
Target Start/End: Complemental strand, 11344125 - 11344083
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||    
T  11344125 ttttttacaaaaacaaaacgatattcatttattcaaattgata 11344083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 480
Target Start/End: Complemental strand, 11738680 - 11738646
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattca 480  Q
    |||||||||||||| ||||||||||||||||||||    
T  11738680 tttttgacaaaaactaaacaatattcattcattca 11738646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 484
Target Start/End: Original strand, 23425142 - 23425180
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaatt 484  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  23425142 tttttgacaaaaacaaaatgatattcattcattcaaatt 23425180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 488
Target Start/End: Original strand, 24610045 - 24610087
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    ||||||||||||| ||||  |||||||||||||||||||||||    
T  24610045 tttttgacaaaaataaaatgatattcattcattcaaattgata 24610087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 449 - 483
Target Start/End: Complemental strand, 24770555 - 24770521
Alignment:
Q  449 ttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    |||||||||||||||| ||||||||||||||||||    
T  24770555 ttgacaaaaacaaaacgatattcattcattcaaat 24770521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 489
Target Start/End: Complemental strand, 2623073 - 2623025
Alignment:
Q  440 ttatcatttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||| |||||||||||||| ||| | ||||||||||||||||||||||||    
T  2623073 ttattatttttgacaaaaataaa-cgatattcattcattcaaattgatag 2623025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 486
Target Start/End: Original strand, 5348391 - 5348424
Alignment:
Q  453 caaaaacaaaacaatattcattcattcaaattga 486  Q
    |||||||||||||||| |||||||||||||||||    
T  5348391 caaaaacaaaacaatactcattcattcaaattga 5348424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 21266700 - 21266663
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  21266700 tttttgacaaaaacaaaatgatattcattcattcaaat 21266663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 26492673 - 26492636
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  26492673 tttttgacaaaaacaaaatgatattcattcattcaaat 26492636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 32521698 - 32521735
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  32521698 tttttgacaaaaataaaacgatattcattcattcaaat 32521735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 42066831 - 42066868
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  42066831 tttttgacaaaaacaaaatgatattcattcattcaaat 42066868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 489
Target Start/End: Original strand, 48643466 - 48643514
Alignment:
Q  440 ttatcatttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||| |||||||||||||| ||| | ||||||||||||||||||||||||    
T  48643466 ttattatttttgacaaaaataaa-cgatattcattcattcaaattgatag 48643514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 486
Target Start/End: Complemental strand, 6559185 - 6559145
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattga 486  Q
    ||||||||||||||||||  ||||||||||||| |||||||    
T  6559185 tttttgacaaaaacaaaatgatattcattcatttaaattga 6559145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 485
Target Start/End: Original strand, 38880398 - 38880438
Alignment:
Q  445 atttttgacaaaaacaaaacaatattcattcattcaaattg 485  Q
    |||||||||||||||||||| || |||||| ||||||||||    
T  38880398 atttttgacaaaaacaaaacgatgttcatttattcaaattg 38880438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 453 - 489
Target Start/End: Original strand, 46822525 - 46822561
Alignment:
Q  453 caaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||| |||||||||| |||||||||||||||||||    
T  46822525 caaaaataaaacaatatccattcattcaaattgatag 46822561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 31851667 - 31851710
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  31851667 tttttgacaaaaacaaaataatattcattcattcaaattgatag 31851710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 7514989 - 7515032
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  7514989 tttttgacaaaaacaaaacgatattcattcattcaaatcgatag 7515032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 31297123 - 31297080
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  31297123 ttttttacaaaaacaaaacgatattcattcattcaaattgatag 31297080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 32327006 - 32327049
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  32327006 tttttgacaaaaacaaaacgatattcattcattcaaatcgatag 32327049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 450 - 489
Target Start/End: Original strand, 33052958 - 33052997
Alignment:
Q  450 tgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  33052958 tgacaaaaacaaaacgatattcattcattcaaattgatag 33052997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 489
Target Start/End: Complemental strand, 29744538 - 29744496
Alignment:
Q  447 ttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||  |||||||||||||||||||||||||||||||    
T  29744538 ttttgacaaaggcaaaacaatattcattcattcaaattgatag 29744496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 447 - 488
Target Start/End: Complemental strand, 32060179 - 32060138
Alignment:
Q  447 ttttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  32060179 ttttgacaaaaataaaacgatattcattcattcaaattgata 32060138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 440 - 489
Target Start/End: Complemental strand, 34018870 - 34018821
Alignment:
Q  440 ttatcatttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||| |||||||| ||||||||||| ||||||||||||| ||||||||||    
T  34018870 ttattatttttgataaaaacaaaacgatattcattcatttaaattgatag 34018821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 606508 - 606465
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||  |||||||||||||||||| |||||    
T  606508 tttttgacaaaaacaaaatgatattcattcattcaaatcgatag 606465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 3913360 - 3913403
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||| ||||| |||||||||||||||||| |||||    
T  3913360 tttttgacaaaaataaaacgatattcattcattcaaatcgatag 3913403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 9341437 - 9341480
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| ||| |||||||||||||| |||||    
T  9341437 tttttgacaaaaacaaaacgatactcattcattcaaatcgatag 9341480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 19164868 - 19164825
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||    
T  19164868 ttttttacaaaaacaaaacgatattcattcattcaaattcatag 19164825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 488
Target Start/End: Original strand, 14174857 - 14174899
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    |||| |||||||||||||| |||||||||||||||||| ||||    
T  14174857 ttttggacaaaaacaaaacgatattcattcattcaaatcgata 14174899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 488
Target Start/End: Original strand, 14179393 - 14179435
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    |||| |||||||||||||| |||||||||||||||||| ||||    
T  14179393 ttttggacaaaaacaaaacgatattcattcattcaaatcgata 14179435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 484
Target Start/End: Original strand, 29319663 - 29319701
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaatt 484  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  29319663 tttttgacaaaaacaaaatgatattcattcattcaaatt 29319701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 3173981 - 3174018
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  3173981 tttttgacaaaaacaaaataatattcgttcattcaaat 3174018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 8497276 - 8497239
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  8497276 tttttgacaaaaacaaaatgatattcattcattcaaat 8497239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 489
Target Start/End: Complemental strand, 12170766 - 12170729
Alignment:
Q  452 acaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  12170766 acaaaaacaaaacgatattcattcattcaaatcgatag 12170729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 23947086 - 23947123
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  23947086 tttttgacaaaaacaaaatgatattcattcattcaaat 23947123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 486
Target Start/End: Complemental strand, 4088768 - 4088728
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattga 486  Q
    ||||| ||||||||||||  |||||||||||||||||||||    
T  4088768 ttttttacaaaaacaaaatgatattcattcattcaaattga 4088728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 488
Target Start/End: Original strand, 31575348 - 31575384
Alignment:
Q  452 acaaaaacaaaacaatattcattcattcaaattgata 488  Q
    |||| |||||||||||||| |||||||||||||||||    
T  31575348 acaagaacaaaacaatatttattcattcaaattgata 31575384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 8984775 - 8984818
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  8984775 tttttgacaaaaacaaaacgatattcattcattcaaattgatag 8984818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 10332334 - 10332377
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  10332334 tttttgacaaaaacaaaacaatatccattcattcaaattgatag 10332377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 13007531 - 13007488
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  13007531 tttttgacaaaaacaaaacgatattcattcattcaaattgatag 13007488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 6011924 - 6011967
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  6011924 tttttgacaaaaacaaaacgatattcattcattcaaatcgatag 6011967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 8087999 - 8088042
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  8087999 tttttgacaaaaacaaaatgatattcattcattcaaattgatag 8088042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 9113511 - 9113554
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  9113511 tttttgacaaaaacaaaacgatattcattcattcaaatcgatag 9113554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 38007659 - 38007616
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  38007659 tttttgacaaaaacaaaacgatattcattcattcaaatcgatag 38007616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 10723064 - 10723022
Alignment:
Q  445 atttttgacaaaaacaaaacaatattcattcattcaaattgat 487  Q
    |||||||||||||||||||| ||||| ||||||||||||||||    
T  10723064 atttttgacaaaaacaaaacgatatttattcattcaaattgat 10723022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 489
Target Start/End: Original strand, 27576155 - 27576197
Alignment:
Q  447 ttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||| |||||||||||||||||||||||||||||||| |||||    
T  27576155 tttttacaaaaacaaaacaatattcattcattcaaatcgatag 27576197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 7886709 - 7886746
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  7886709 tttttgacaaaaacaaaacgatattcattcattcaaat 7886746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 489
Target Start/End: Complemental strand, 13422231 - 13422191
Alignment:
Q  449 ttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  13422231 ttgacaaaaacaaaatgatattcattcattcaaattgatag 13422191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 489
Target Start/End: Original strand, 14726250 - 14726290
Alignment:
Q  449 ttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  14726250 ttgacaaaaacaaaacgatattcattcattcaaatcgatag 14726290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 440 - 489
Target Start/End: Original strand, 31391548 - 31391599
Alignment:
Q  440 ttatcatttttgacaaaaacaaaacaatattcattc--attcaaattgatag 489  Q
    |||| |||||||||||||||||||| ||||||||||  ||||||||||||||    
T  31391548 ttattatttttgacaaaaacaaaacgatattcattcagattcaaattgatag 31391599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 489
Target Start/End: Complemental strand, 4771150 - 4771115
Alignment:
Q  454 aaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||| ||||||||||||||||||||||||    
T  4771150 aaaaacaaaacgatattcattcattcaaattgatag 4771115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 24229570 - 24229613
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||    
T  24229570 tttttaacaaaaacaaaacgatattcattcattcaaatcgatag 24229613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 26825732 - 26825689
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||| ||||| |||||||||||||||||| |||||    
T  26825732 tttttgacaaaaataaaacgatattcattcattcaaatcgatag 26825689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 488
Target Start/End: Complemental strand, 6217200 - 6217158
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    ||||| ||||||| ||||| |||||||||||||||||||||||    
T  6217200 tttttaacaaaaataaaacgatattcattcattcaaattgata 6217158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 488
Target Start/End: Complemental strand, 39326712 - 39326670
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||    
T  39326712 tttttaacaaaaacaaaacgatattcattcatttaaattgata 39326670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 487
Target Start/End: Original strand, 177749 - 177790
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgat 487  Q
    ||||||||||||| ||||  ||||||||||||||||||||||    
T  177749 tttttgacaaaaaaaaaatgatattcattcattcaaattgat 177790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 489
Target Start/End: Complemental strand, 7930450 - 7930413
Alignment:
Q  452 acaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  7930450 acaagaacaaaacgatattcattcattcaaattgatag 7930413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 21060052 - 21060089
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  21060052 tttttgacaaaaacaaaatgatattcattcattcaaat 21060089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 30371931 - 30371894
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  30371931 tttttgacaaaaacaaaatgatattcattcattcaaat 30371894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 34882027 - 34881990
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  34882027 tttttgacaaaaacaaaatgatattcattcattcaaat 34881990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 43008084 - 43008121
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  43008084 ttttttacaaaaacaaaataatattcattcattcaaat 43008121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 485
Target Start/End: Complemental strand, 6639458 - 6639418
Alignment:
Q  445 atttttgacaaaaacaaaacaatattcattcattcaaattg 485  Q
    ||||||||||||||  |||| ||||||||||||||||||||    
T  6639458 atttttgacaaaaaataaacgatattcattcattcaaattg 6639418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 486
Target Start/End: Complemental strand, 28662524 - 28662485
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattga 486  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  28662524 tttttgacaaaaataaa-caatattcattcattcaaattga 28662485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 37876393 - 37876436
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  37876393 tttttgacaaaaacaaaacgatattcattcattcaaattgatag 37876436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 37994596 - 37994553
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  37994596 tttttgacaaaaacaaaacgatattcattcattcaaattgatag 37994553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 447 - 489
Target Start/End: Complemental strand, 41328051 - 41328009
Alignment:
Q  447 ttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  41328051 ttttgacaaaaacaaaacgatattcattcattcaaattgatag 41328009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 4779066 - 4779023
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  4779066 tttttgacaaaaacaaaactatattcattcattcaaatcgatag 4779023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 5427656 - 5427699
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  5427656 tttttgacaaaaacaaaacgatattcattcattcaaatcgatag 5427699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 32448404 - 32448447
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  32448404 tttttgacaaaaacaaaatgatattcattcattcaaattgatag 32448447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 33924018 - 33923975
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  33924018 tttttgacaaaaacaaaacgatattcattcattcaaatcgatag 33923975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 488
Target Start/End: Complemental strand, 24588047 - 24588005
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    ||||||||||||||||||||| ||||||| |||||||||||||    
T  24588047 tttttgacaaaaacaaaacaacattcatttattcaaattgata 24588005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 488
Target Start/End: Original strand, 29279352 - 29279394
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  29279352 tttttgacaaaaactaaacgatattcattcattcaaattgata 29279394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 18763781 - 18763744
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  18763781 tttttgacaaaaacaaaacgatattcattcattcaaat 18763744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 486
Target Start/End: Original strand, 26025265 - 26025305
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattga 486  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  26025265 tttttgacaaaaacaaaatgatattcattcattcaaattga 26025305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 440 - 488
Target Start/End: Complemental strand, 36324172 - 36324124
Alignment:
Q  440 ttatcatttttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    |||| |||||||||||||||||||| |||| |||| |||||||||||||    
T  36324172 ttattatttttgacaaaaacaaaacgatatacatttattcaaattgata 36324124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 1415870 - 1415827
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||  |||||||||||||||||| |||||    
T  1415870 tttttgacaaaaacaaaatgatattcattcattcaaatcgatag 1415827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 4100643 - 4100600
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||    
T  4100643 tttttgaaaaaaacaaaacgatattcattcattcaaatcgatag 4100600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 4903932 - 4903975
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||    
T  4903932 ttttttacaaaaacaaaacgatattcattcatttaaattgatag 4903975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 449 - 488
Target Start/End: Complemental strand, 7646788 - 7646749
Alignment:
Q  449 ttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  7646788 ttgacaaaaacaaaacgatattcattcattcaaatcgata 7646749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 483
Target Start/End: Original strand, 9374334 - 9374369
Alignment:
Q  448 tttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||| ||||||||||||||||||    
T  9374334 tttgacaaaaacaaaacgatattcattcattcaaat 9374369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 10929977 - 10929934
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||  |||||||||| |||||||||||||    
T  10929977 tttttgacaaaaacaaaaagatattcattcgttcaaattgatag 10929934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 11189412 - 11189455
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||||||||||||| |||  |||||||||    
T  11189412 tttttgacaaaaacaaaacaatattcatttattttaattgatag 11189455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 12553956 - 12553999
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||    
T  12553956 tttttgacaaaaataaaatgatattcattcattcaaattgatag 12553999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 14955853 - 14955810
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||    
T  14955853 tttttgacaaaaacaaaatgatattcattcatttaaattgatag 14955810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 19062135 - 19062178
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||||    
T  19062135 ttttttacaaaaataaaacaatattcattcatttaaattgatag 19062178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 24461752 - 24461709
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||||    
T  24461752 ttttttacaaaaataaaacgatattcattcattcaaattgatag 24461709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 31193123 - 31193166
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||    
T  31193123 ttttttacaaaaacaaaacgatattcattcattcaaatcgatag 31193166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 489
Target Start/End: Complemental strand, 31788765 - 31788726
Alignment:
Q  450 tgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  31788765 tgacaaaaacaaaacgatattcattcattcaaatcgatag 31788726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 485
Target Start/End: Original strand, 34128460 - 34128499
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattg 485  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  34128460 ttttttacaaaaacaaaacaatatttattcattcaaattg 34128499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 487
Target Start/End: Complemental strand, 37417023 - 37416992
Alignment:
Q  456 aaacaaaacaatattcattcattcaaattgat 487  Q
    ||||||||||||||||||||||||||||||||    
T  37417023 aaacaaaacaatattcattcattcaaattgat 37416992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 37613895 - 37613938
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||| ||||||||| |||||    
T  37613895 tttttgacaaaaacaaaaccatattcatccattcaaatcgatag 37613938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 38445479 - 38445436
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||    
T  38445479 ttttttacaaaaacaaaacgatattcattcattcaaatcgatag 38445436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 447 - 489
Target Start/End: Original strand, 25508856 - 25508898
Alignment:
Q  447 ttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||    
T  25508856 tttttacaaaaacaaaacgatatttattcattcaaattgatag 25508898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 449 - 483
Target Start/End: Original strand, 36942912 - 36942946
Alignment:
Q  449 ttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    |||||||||||||||| ||||||||||||||||||    
T  36942912 ttgacaaaaacaaaacgatattcattcattcaaat 36942946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 480
Target Start/End: Original strand, 42017678 - 42017712
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattca 480  Q
    ||||||||||||||||||| |||||||||||||||    
T  42017678 tttttgacaaaaacaaaacgatattcattcattca 42017712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 2808242 - 2808279
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  2808242 tttttgacaaaaacaaaatgatattcattcattcaaat 2808279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 4193149 - 4193112
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  4193149 tttttgacaaaaacaaaatgatattcattcattcaaat 4193112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 12677238 - 12677275
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  12677238 tttttgataaaaacaaaacgatattcattcattcaaat 12677275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 22422040 - 22422003
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  22422040 tttttgacaaaaacaaaatgatattcattcattcaaat 22422003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 25087347 - 25087310
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  25087347 tttttgacaaaaacaaaatgatattcattcattcaaat 25087310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 27248920 - 27248957
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  27248920 tttttgacaaaaacaaaatgatattcattcattcaaat 27248957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 489
Target Start/End: Original strand, 30923250 - 30923287
Alignment:
Q  452 acaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  30923250 acaaaaacaaaatgatattcattcattcaaattgatag 30923287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 31580424 - 31580461
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  31580424 tttttgacaaaaacaaaatgatattcattcattcaaat 31580461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 33585522 - 33585559
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  33585522 tttttgacaaaaacaaaacgatattctttcattcaaat 33585559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 33759971 - 33760008
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  33759971 ttttttacaaaaacaaaataatattcattcattcaaat 33760008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 36234310 - 36234273
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  36234310 tttttgacaaaaacaaaatgatattcattcattcaaat 36234273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 449 - 481
Target Start/End: Original strand, 27097206 - 27097238
Alignment:
Q  449 ttgacaaaaacaaaacaatattcattcattcaa 481  Q
    |||||||||||||||| ||||||||||||||||    
T  27097206 ttgacaaaaacaaaacgatattcattcattcaa 27097238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 461 - 489
Target Start/End: Original strand, 28261565 - 28261593
Alignment:
Q  461 aaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||||||||||||||||||    
T  28261565 aaacaatattcattcattcaaattgatag 28261593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 453 - 489
Target Start/End: Complemental strand, 35220634 - 35220598
Alignment:
Q  453 caaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||| | ||||||||||||||||||||||    
T  35220634 caaaaacaaaacgacattcattcattcaaattgatag 35220598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 27456795 - 27456752
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  27456795 tttttgacaaaaacaaaacgatattcattcattcaaattgatag 27456752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 47133208 - 47133165
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  47133208 tttttgacaaaaacaaaacgatattcattcattcaaattgatag 47133165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 487
Target Start/End: Original strand, 32678930 - 32678971
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgat 487  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  32678930 tttttgacaaaaacaaaacgatattcattcattcaaattgat 32678971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 448 - 488
Target Start/End: Complemental strand, 50377627 - 50377587
Alignment:
Q  448 tttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  50377627 tttgacaaaaacaaaacgatattcattcattcaaattgata 50377587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 5984122 - 5984079
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  5984122 tttttgacaaaaacaaaacgatattcattcattcaaatcgatag 5984079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 26535642 - 26535599
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||| |||||||||||||| ||||||||||||||||||||||||    
T  26535642 ttttggacaaaaacaaaacgatattcattcattcaaattgatag 26535599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 34878064 - 34878107
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  34878064 tttttgacaaaaacaaaacgatattcattcattcaaatcgatag 34878107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 49504381 - 49504424
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  49504381 tttttgacaaaaacaaaacgatattcattcattcaaatcgatag 49504424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 488
Target Start/End: Complemental strand, 39888488 - 39888446
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  39888488 tttttgacaaaaacaaaacgatattcattcatacaaattgata 39888446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 489
Target Start/End: Complemental strand, 44915946 - 44915902
Alignment:
Q  445 atttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||    
T  44915946 atttttgacaaaaataaaatgatattcattcattcaaattgatag 44915902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 485
Target Start/End: Original strand, 5685686 - 5685721
Alignment:
Q  450 tgacaaaaacaaaacaatattcattcattcaaattg 485  Q
    ||||||||||||||| ||||||||||||||||||||    
T  5685686 tgacaaaaacaaaacgatattcattcattcaaattg 5685721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 481
Target Start/End: Original strand, 8211093 - 8211128
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaa 481  Q
    ||||||||||||||||||||||||||||||| ||||    
T  8211093 tttttgacaaaaacaaaacaatattcattcaatcaa 8211128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 12635475 - 12635432
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||    
T  12635475 ttttcgacaaaaacaaaacgatattcattcatttaaattgatag 12635432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 21687684 - 21687641
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||    
T  21687684 ttttttacaaaaacaaaacgatattcattcattcaaatcgatag 21687641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 32395303 - 32395260
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||| ||||||||| |||||    
T  32395303 tttttgacaaaaacaaaacgatattcatccattcaaatcgatag 32395260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 33486681 - 33486724
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||||    
T  33486681 ttttttacaaaaaaaaaacgatattcattcattcaaattgatag 33486724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 36894194 - 36894237
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||    
T  36894194 tttttcacaaaaacaaaacgatattcattcattcaaatcgatag 36894237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 40163216 - 40163259
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||| |||| |||||| ||||||||||||||||||||||||    
T  40163216 tttttgataaaagcaaaacgatattcattcattcaaattgatag 40163259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 41081473 - 41081516
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||  |||||||||||||||||| |||||    
T  41081473 tttttgacaaaaacaaaatgatattcattcattcaaatcgatag 41081516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 480
Target Start/End: Complemental strand, 1742597 - 1742563
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattca 480  Q
    ||||||||||||||||||||||||| |||||||||    
T  1742597 tttttgacaaaaacaaaacaatatttattcattca 1742563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 488
Target Start/End: Complemental strand, 39987730 - 39987688
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    ||||| |||||| |||||| |||||||||||||||||||||||    
T  39987730 ttttttacaaaaccaaaacgatattcattcattcaaattgata 39987688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 486
Target Start/End: Complemental strand, 5601062 - 5601025
Alignment:
Q  449 ttgacaaaaacaaaacaatattcattcattcaaattga 486  Q
    ||||||||||||||||||||||||||| || |||||||    
T  5601062 ttgacaaaaacaaaacaatattcattcgtttaaattga 5601025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 9686974 - 9687011
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  9686974 tttttgacaaaaacaaaatgatattcattcattcaaat 9687011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 489
Target Start/End: Original strand, 11462274 - 11462311
Alignment:
Q  452 acaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  11462274 acaaaaacaaaacgatattcattcattcaaatcgatag 11462311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 20266614 - 20266577
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  20266614 tttttgacaaaaacaaaatgatattcattcattcaaat 20266577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 30712078 - 30712115
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  30712078 tttttgacaaaaacaaaatgatattcattcattcaaat 30712115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 30879387 - 30879350
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  30879387 tttttgacaaaaacaaaatgatattcattcattcaaat 30879350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 48217749 - 48217712
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  48217749 tttttgacaaaaacaaaatgatattcattcattcaaat 48217712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 486
Target Start/End: Complemental strand, 9172802 - 9172762
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattga 486  Q
    ||||||||||||| ||||  |||||||||||||||||||||    
T  9172802 tttttgacaaaaataaaaagatattcattcattcaaattga 9172762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 486
Target Start/End: Complemental strand, 9180784 - 9180744
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattga 486  Q
    ||||||||||||| ||||  |||||||||||||||||||||    
T  9180784 tttttgacaaaaataaaaagatattcattcattcaaattga 9180744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 486
Target Start/End: Original strand, 38520304 - 38520344
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattga 486  Q
    ||||||||||||||||||  ||||||||||||| |||||||    
T  38520304 tttttgacaaaaacaaaatcatattcattcatttaaattga 38520344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 461 - 489
Target Start/End: Complemental strand, 42491330 - 42491302
Alignment:
Q  461 aaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||||||||||||||||||    
T  42491330 aaacaatattcattcattcaaattgatag 42491302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 486
Target Start/End: Original strand, 45425836 - 45425875
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattga 486  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  45425836 tttttgacaaaaacaaaata-tattcattcattcaaattga 45425875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 486
Target Start/End: Complemental strand, 45789855 - 45789815
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattga 486  Q
    ||||||||||||| ||||| ||||||||||||| |||||||    
T  45789855 tttttgacaaaaataaaacgatattcattcatttaaattga 45789815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 487
Target Start/End: Complemental strand, 21313338 - 21313297
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgat 487  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  21313338 tttttgacaaaaacaaaacgatattcattcattcaaattgat 21313297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 628710 - 628753
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  628710 tttttgacaaaaacaaaatgatattcattcattcaaattgatag 628753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 6954482 - 6954525
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  6954482 tttttgacaaaaacaaaacgatattcattcattcaaatcgatag 6954525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 20464751 - 20464794
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  20464751 tttttgacaaaaacaaaatgatattcattcattcaaattgatag 20464794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 23799734 - 23799777
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  23799734 ttttttacaaaaacaaaacgatattcattcattcaaattgatag 23799777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 43017190 - 43017147
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  43017190 tttttgacaaaaacaaaacgatattcattcattcaaatcgatag 43017147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 46304307 - 46304350
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  46304307 ttttttacaaaaacaaaacgatattcattcattcaaattgatag 46304350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 47896453 - 47896410
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||    
T  47896453 tttttgacaaaaacaaaacgatattcattgattcaaattgatag 47896410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 52922903 - 52922946
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  52922903 tttttgacaaaaacaaaacgatattcattcattcaaatcgatag 52922946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 488
Target Start/End: Original strand, 9797320 - 9797362
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    ||||||||||||||||||| |||||||||||||||||| ||||    
T  9797320 tttttgacaaaaacaaaacgatattcattcattcaaatcgata 9797362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 440 - 489
Target Start/End: Original strand, 105696 - 105744
Alignment:
Q  440 ttatcatttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||| |||||||||||||| ||| ||||||||||||||||||||||||||    
T  105696 ttattatttttgacaaaaataaa-caatattcattcattcaaattgatag 105744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 452 - 489
Target Start/End: Complemental strand, 14859791 - 14859754
Alignment:
Q  452 acaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  14859791 acaaaaacagaacaatattcattcattcaaattgatag 14859754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 486
Target Start/End: Complemental strand, 17238110 - 17238070
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattga 486  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  17238110 tttttgacaaaaacaaaatgatattcattcattcaaattga 17238070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 486
Target Start/End: Original strand, 20608684 - 20608724
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattga 486  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  20608684 tttttgacaaaaacaaaacgatattcattcaatcaaattga 20608724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 10229778 - 10229735
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||| ||||| |||||||||||||||||| |||||    
T  10229778 tttttgacaaaaataaaacgatattcattcattcaaatcgatag 10229735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 21533595 - 21533638
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||  |||||||||||||||||| |||||    
T  21533595 tttttgacaaaaacaaaatgatattcattcattcaaatcgatag 21533638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 26715908 - 26715951
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||    
T  26715908 ttttttacaaaaacaaaacaatattcggtcattcaaattgatag 26715951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 31271618 - 31271661
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||| ||||| ||||||||||||||||||| ||||||||||    
T  31271618 tttttgataaaaataaaacaatattcattcatttaaattgatag 31271661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 35175705 - 35175662
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||||    
T  35175705 ttttttacaaaaataaaacgatattcattcattcaaattgatag 35175662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 36461223 - 36461266
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| |||||| |||||||||||| ||||||||||||||||||    
T  36461223 ttttttacaaaatcaaaacaatattaattcattcaaattgatag 36461266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 36910552 - 36910595
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||| ||||| |||||||||||||||||| |||||    
T  36910552 tttttgacaaaaataaaacgatattcattcattcaaatcgatag 36910595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 38546101 - 38546058
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||    
T  38546101 tttttgacaaaaacaaaacgatatttattcattcaaatcgatag 38546058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 40487627 - 40487584
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||    
T  40487627 ttttttacaaaaacaaaacgatattcattcattcaaatcgatag 40487584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 47041834 - 47041877
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||||||||  |||||||||||||||||| |||||    
T  47041834 tttttgacaaaaacaaaatgatattcattcattcaaatagatag 47041877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 48401568 - 48401525
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||  |||| ||||||||||||||||||||||||    
T  48401568 tttttgacaaaaaataaacgatattcattcattcaaattgatag 48401525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 50981119 - 50981162
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||  |||| ||||||||||||||||||||||||    
T  50981119 tttttgacaaaaaataaacgatattcattcattcaaattgatag 50981162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 51084253 - 51084296
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||  |||| ||||||||||||||||||||||||    
T  51084253 tttttgacaaaaaataaacgatattcattcattcaaattgatag 51084296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 447 - 489
Target Start/End: Complemental strand, 10108537 - 10108495
Alignment:
Q  447 ttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||| ||||| |||||||||||||||||| |||||    
T  10108537 ttttgacaaaaataaaacgatattcattcattcaaatcgatag 10108495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 447 - 489
Target Start/End: Complemental strand, 10233371 - 10233329
Alignment:
Q  447 ttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||| ||||| |||||||||||||||||| |||||    
T  10233371 ttttgacaaaaataaaacgatattcattcattcaaatcgatag 10233329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 447 - 489
Target Start/End: Complemental strand, 41818527 - 41818485
Alignment:
Q  447 ttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||| |||||| |||||| ||||||||||||||||||||||||    
T  41818527 tttttacaaaagcaaaacgatattcattcattcaaattgatag 41818485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 447 - 489
Target Start/End: Original strand, 46979770 - 46979812
Alignment:
Q  447 ttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||||||| || |||||||||| ||||||||||    
T  46979770 ttttgacaaaaacaaaactattttcattcattaaaattgatag 46979812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 487
Target Start/End: Original strand, 953331 - 953372
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgat 487  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||    
T  953331 ttttttacaaaaacaaaacgatattcattcattcagattgat 953372  T

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Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 2342753 - 2342716
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  2342753 tttttgacaaaaacaaaatgatattcattcattcaaat 2342716  T

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Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 4178870 - 4178833
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  4178870 tttttgacaaaaacaaaatgatattcattcattcaaat 4178833  T

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Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 12050434 - 12050471
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  12050434 tttttgacaaaaacaaaacgatattcattcatttaaat 12050471  T

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Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 489
Target Start/End: Original strand, 24396291 - 24396328
Alignment:
Q  452 acaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  24396291 acaaaaacaaaacgatattcattaattcaaattgatag 24396328  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 25162741 - 25162704
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  25162741 tttttgacaaaaacaaaatgatattcattcattcaaat 25162704  T

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Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 25850103 - 25850066
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  25850103 tttttcacaaaaacaaaacgatattcattcattcaaat 25850066  T

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Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 38854808 - 38854845
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  38854808 tttttgacaaaaacaaaatgatattcattcattcaaat 38854845  T

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Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 40557004 - 40556967
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  40557004 tttttaacaaaaacaaaacgatattcattcattcaaat 40556967  T

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Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 449 - 489
Target Start/End: Original strand, 3085080 - 3085120
Alignment:
Q  449 ttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||| ||||||||||  ||||||||||||||||||||||||    
T  3085080 ttgagaaaaacaaaatgatattcattcattcaaattgatag 3085120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 461 - 489
Target Start/End: Original strand, 40883543 - 40883571
Alignment:
Q  461 aaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||||||||||||||||||    
T  40883543 aaacaatattcattcattcaaattgatag 40883571  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 484
Target Start/End: Complemental strand, 47733401 - 47733369
Alignment:
Q  452 acaaaaacaaaacaatattcattcattcaaatt 484  Q
    ||||||||||||| |||||||||||||||||||    
T  47733401 acaaaaacaaaacgatattcattcattcaaatt 47733369  T

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Target: scaffold0603 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 8030 - 7987
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||    
T  8030 tttttgacaaaaaaaaaacgatattcattcattcaaattgatag 7987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 449 - 488
Target Start/End: Original strand, 53190 - 53229
Alignment:
Q  449 ttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  53190 ttgacaaaaacaaaacgatattcattcattcaaattgata 53229  T

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Target: scaffold0445 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 446 - 483
Target Start/End: Complemental strand, 1675 - 1638
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  1675 tttttgacaaaaacaaaacgatattcattcattcaaat 1638  T

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Target: scaffold0445; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 483
Target Start/End: Original strand, 1719 - 1756
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaat 483  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  1719 tttttgacaaaaacaaaacgatattcattcgttcaaat 1756  T

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Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 447 - 488
Target Start/End: Complemental strand, 4459 - 4418
Alignment:
Q  447 ttttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    ||||||||||| ||||| ||||||||||||||||||||||||    
T  4459 ttttgacaaaagcaaaataatattcattcattcaaattgata 4418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 486
Target Start/End: Original strand, 16089 - 16129
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattga 486  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  16089 tttttgacaaaaacaaaatgatattcattcattcaaattga 16129  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 486
Target Start/End: Original strand, 65828 - 65868
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattga 486  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  65828 ttttttacaaaaacaaaacaatattcattcattgaaattga 65868  T

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Target: scaffold0136 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 9828 - 9871
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||| ||||| |||||||||||||||||||||||||| |||||    
T  9828 ttttttacaaagacaaaacaatattcattcattcaaatcgatag 9871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 37134 - 37091
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||||||||| |||||||||| | ||||||||||||    
T  37134 tttttgacaaaaacaaaataatattcattaaatcaaattgatag 37091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 36459 - 36502
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||| |||||||||||||| |||||| |||||||||||||||||    
T  36459 ttttagacaaaaacaaaacgatattctttcattcaaattgatag 36502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 3820 - 3863
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    |||||||||||| ||| || ||||||||||||||||||||||||    
T  3820 tttttgacaaaagcaatacgatattcattcattcaaattgatag 3863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 488
Target Start/End: Original strand, 31060 - 31102
Alignment:
Q  446 tttttgacaaaaacaaaacaatattcattcattcaaattgata 488  Q
    ||||| ||||||| ||||| |||||||||||||||||||||||    
T  31060 ttttttacaaaaataaaacgatattcattcattcaaattgata 31102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 489
Target Start/End: Original strand, 57881 - 57918
Alignment:
Q  452 acaaaaacaaaacaatattcattcattcaaattgatag 489  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  57881 acaaaaacaaaacgatattcattcatttaaattgatag 57918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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