View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18521_high_29 (Length: 243)

Name: NF18521_high_29
Description: NF18521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18521_high_29
NF18521_high_29
[»] chr8 (51 HSPs)
chr8 (1-237)||(24069268-24069504)
chr8 (1-237)||(7770720-7770955)
chr8 (1-237)||(7796630-7796865)
chr8 (1-237)||(7815911-7816146)
chr8 (1-228)||(39515257-39515480)
chr8 (1-206)||(34617048-34617253)
chr8 (1-153)||(13366956-13367108)
chr8 (4-148)||(35943969-35944113)
chr8 (1-153)||(8095404-8095556)
chr8 (1-137)||(36070236-36070372)
chr8 (1-153)||(37276149-37276301)
chr8 (1-116)||(19913550-19913665)
chr8 (1-80)||(37472461-37472540)
chr8 (1-139)||(20308663-20308801)
chr8 (1-139)||(21095296-21095434)
chr8 (1-153)||(2421199-2421351)
chr8 (1-52)||(38591014-38591065)
chr8 (1-120)||(39546616-39546735)
chr8 (2-153)||(44606198-44606349)
chr8 (8-138)||(7486142-7486272)
chr8 (1-58)||(31625385-31625442)
chr8 (1-69)||(29738349-29738417)
chr8 (1-52)||(43275808-43275859)
chr8 (43-153)||(21961923-21962033)
chr8 (63-153)||(45384360-45384449)
chr8 (12-113)||(8395064-8395165)
chr8 (1-66)||(29739636-29739701)
chr8 (1-58)||(37274945-37275002)
chr8 (40-120)||(39142-39222)
chr8 (1-92)||(16363779-16363870)
chr8 (4-59)||(43277921-43277976)
chr8 (10-92)||(31871462-31871544)
chr8 (8-129)||(117113-117234)
chr8 (43-140)||(13363497-13363594)
chr8 (44-153)||(21267233-21267342)
chr8 (1-138)||(39220737-39220874)
chr8 (1-70)||(41522677-41522746)
chr8 (61-153)||(39325740-39325832)
chr8 (1-64)||(19914901-19914964)
chr8 (43-153)||(44103201-44103312)
chr8 (4-58)||(3237478-3237532)
chr8 (5-59)||(8096545-8096599)
chr8 (1-47)||(38589878-38589924)
chr8 (1-58)||(24068388-24068445)
chr8 (80-153)||(27059122-27059195)
chr8 (1-58)||(31623964-31624021)
chr8 (1-38)||(41867937-41867974)
chr8 (1-58)||(45385795-45385852)
chr8 (64-117)||(45395091-45395144)
chr8 (101-153)||(13513578-13513630)
chr8 (101-153)||(13603111-13603163)
[»] chr4 (58 HSPs)
chr4 (1-237)||(26392949-26393185)
chr4 (1-237)||(3533431-3533666)
chr4 (1-237)||(56000345-56000581)
chr4 (4-224)||(56296254-56296474)
chr4 (4-200)||(29663703-29663899)
chr4 (1-141)||(11114898-11115038)
chr4 (6-153)||(6140266-6140413)
chr4 (1-148)||(34438464-34438610)
chr4 (1-148)||(44159143-44159289)
chr4 (1-162)||(38370340-38370502)
chr4 (1-153)||(43419282-43419433)
chr4 (1-66)||(28103479-28103544)
chr4 (1-140)||(17319100-17319239)
chr4 (1-140)||(50530561-50530700)
chr4 (1-67)||(11113800-11113866)
chr4 (4-153)||(15787013-15787162)
chr4 (1-66)||(31711150-31711215)
chr4 (1-162)||(38418914-38419075)
chr4 (8-140)||(35787861-35787993)
chr4 (1-52)||(15787509-15787560)
chr4 (46-153)||(38555182-38555289)
chr4 (1-86)||(31712479-31712564)
chr4 (1-58)||(33377365-33377422)
chr4 (63-154)||(1188966-1189057)
chr4 (78-153)||(52633600-52633674)
chr4 (6-91)||(86866-86951)
chr4 (1-58)||(1273434-1273491)
chr4 (64-153)||(2162733-2162822)
chr4 (1-50)||(5687233-5687282)
chr4 (1-58)||(21104311-21104368)
chr4 (1-50)||(27408821-27408870)
chr4 (21-86)||(28102154-28102219)
chr4 (1-86)||(52660187-52660272)
chr4 (1-58)||(53400243-53400300)
chr4 (4-52)||(55953859-55953907)
chr4 (63-154)||(44503581-44503672)
chr4 (1-55)||(50531760-50531814)
chr4 (1-50)||(5688646-5688695)
chr4 (1-58)||(33376276-33376333)
chr4 (1-58)||(37560300-37560357)
chr4 (1-58)||(38417611-38417668)
chr4 (1-58)||(44128335-44128392)
chr4 (1-85)||(11094584-11094668)
chr4 (64-148)||(11438476-11438560)
chr4 (73-153)||(13533165-13533244)
chr4 (6-58)||(26788585-26788637)
chr4 (1-153)||(48207625-48207775)
chr4 (1-52)||(27410690-27410740)
chr4 (1-52)||(55952883-55952934)
chr4 (198-228)||(29664716-29664746)
chr4 (8-50)||(34439669-34439711)
chr4 (1-58)||(15446671-15446728)
chr4 (64-153)||(28657022-28657110)
chr4 (9-50)||(44126664-44126705)
chr4 (1-58)||(46796027-46796084)
chr4 (1-145)||(15445494-15445637)
chr4 (63-99)||(40445488-40445524)
chr4 (101-153)||(53401389-53401440)
[»] chr3 (46 HSPs)
chr3 (1-225)||(48254723-48254946)
chr3 (1-237)||(43346268-43346505)
chr3 (1-196)||(21127983-21128178)
chr3 (1-153)||(12062290-12062442)
chr3 (1-148)||(51400273-51400420)
chr3 (1-153)||(23559877-23560029)
chr3 (1-145)||(48867344-48867488)
chr3 (1-153)||(7821892-7822044)
chr3 (1-153)||(17350008-17350160)
chr3 (5-153)||(25583176-25583323)
chr3 (4-148)||(26798817-26798961)
chr3 (73-148)||(5123255-5123329)
chr3 (4-153)||(8371281-8371430)
chr3 (1-153)||(53808376-53808528)
chr3 (1-153)||(11219488-11219640)
chr3 (1-153)||(39133075-39133227)
chr3 (63-153)||(35633347-35633436)
chr3 (1-58)||(47855339-47855396)
chr3 (1-58)||(49122003-49122060)
chr3 (1-58)||(54653967-54654024)
chr3 (4-58)||(19253003-19253057)
chr3 (2-52)||(42633893-42633943)
chr3 (1-66)||(11220651-11220716)
chr3 (1-58)||(29536772-29536829)
chr3 (1-50)||(32980461-32980510)
chr3 (1-58)||(41386188-41386245)
chr3 (1-58)||(42632764-42632821)
chr3 (10-50)||(2124096-2124136)
chr3 (73-153)||(21074183-21074263)
chr3 (73-153)||(55423526-55423605)
chr3 (1-52)||(10987660-10987711)
chr3 (1-52)||(12060716-12060767)
chr3 (64-135)||(21515533-21515603)
chr3 (73-136)||(46495627-46495690)
chr3 (196-239)||(48254679-48254722)
chr3 (1-52)||(54752674-54752725)
chr3 (43-153)||(34902900-34903010)
chr3 (4-58)||(41387434-41387488)
chr3 (1-39)||(51401371-51401409)
chr3 (1-130)||(35174311-35174440)
chr3 (1-58)||(47808107-47808164)
chr3 (1-50)||(51825630-51825679)
chr3 (4-48)||(13077962-13078006)
chr3 (10-58)||(29537143-29537191)
chr3 (73-153)||(31282442-31282521)
chr3 (6-58)||(43103297-43103349)
[»] chr7 (49 HSPs)
chr7 (1-237)||(45719673-45719909)
chr7 (1-120)||(46458652-46458771)
chr7 (1-153)||(26406183-26406335)
chr7 (43-160)||(8661783-8661900)
chr7 (43-136)||(8661924-8662017)
chr7 (1-153)||(33459449-33459601)
chr7 (1-66)||(24873590-24873655)
chr7 (8-153)||(35484217-35484361)
chr7 (1-153)||(131905-132057)
chr7 (6-86)||(24872053-24872133)
chr7 (72-203)||(28325201-28325333)
chr7 (1-52)||(19278411-19278462)
chr7 (1-140)||(25154855-25154994)
chr7 (26-140)||(14108990-14109104)
chr7 (26-140)||(14418947-14419061)
chr7 (4-58)||(36702951-36703005)
chr7 (72-153)||(7346043-7346123)
chr7 (1-58)||(19279613-19279670)
chr7 (1-58)||(22746321-22746378)
chr7 (1-66)||(25153716-25153781)
chr7 (1-58)||(46674935-46674992)
chr7 (4-153)||(48755455-48755603)
chr7 (5-89)||(43930381-43930465)
chr7 (1-136)||(41516267-41516402)
chr7 (4-86)||(4857262-4857344)
chr7 (1-83)||(13286970-13287052)
chr7 (4-50)||(35127871-35127917)
chr7 (1-91)||(38406076-38406166)
chr7 (1-46)||(7347233-7347278)
chr7 (1-50)||(22060521-22060570)
chr7 (5-46)||(22061808-22061849)
chr7 (1-50)||(22744804-22744853)
chr7 (1-50)||(43006443-43006492)
chr7 (1-46)||(43007662-43007707)
chr7 (1-50)||(46457128-46457177)
chr7 (73-153)||(9662141-9662220)
chr7 (2-58)||(13446659-13446715)
chr7 (1-137)||(40930476-40930612)
chr7 (61-120)||(17287192-17287251)
chr7 (45-119)||(18668865-18668939)
chr7 (44-153)||(24494957-24495066)
chr7 (4-57)||(36702838-36702891)
chr7 (1-58)||(40926520-40926577)
chr7 (1-46)||(43935243-43935288)
chr7 (1-58)||(47163211-47163268)
chr7 (1-58)||(48754054-48754111)
chr7 (1-29)||(10257416-10257444)
chr7 (72-120)||(34598856-34598903)
chr7 (8-52)||(35128198-35128242)
[»] chr5 (35 HSPs)
chr5 (1-216)||(15856592-15856806)
chr5 (1-153)||(12830845-12830996)
chr5 (1-153)||(12862825-12862976)
chr5 (1-153)||(40058076-40058228)
chr5 (1-120)||(19525227-19525346)
chr5 (1-153)||(223284-223436)
chr5 (1-120)||(5383000-5383119)
chr5 (64-153)||(20539249-20539338)
chr5 (12-153)||(22819424-22819564)
chr5 (1-66)||(12936095-12936160)
chr5 (1-153)||(2167421-2167572)
chr5 (2-153)||(32734190-32734341)
chr5 (1-120)||(42510172-42510291)
chr5 (1-51)||(22819557-22819607)
chr5 (1-66)||(12950253-12950318)
chr5 (1-69)||(12933809-12933877)
chr5 (1-69)||(12947970-12948038)
chr5 (73-148)||(10977155-10977229)
chr5 (1-58)||(15613563-15613620)
chr5 (1-50)||(19827149-19827198)
chr5 (1-58)||(42980710-42980767)
chr5 (8-116)||(38471354-38471462)
chr5 (1-58)||(5384347-5384404)
chr5 (1-50)||(15857627-15857676)
chr5 (1-50)||(18678034-18678083)
chr5 (1-58)||(24761722-24761779)
chr5 (1-58)||(38473556-38473613)
chr5 (1-58)||(42979506-42979563)
chr5 (4-51)||(1273150-1273197)
chr5 (1-52)||(15614967-15615018)
chr5 (1-52)||(26404217-26404268)
chr5 (3-89)||(5977043-5977129)
chr5 (64-153)||(32757949-32758039)
chr5 (1-58)||(10085846-10085903)
chr5 (10-50)||(32735488-32735528)
[»] chr1 (42 HSPs)
chr1 (1-120)||(13930614-13930733)
chr1 (1-120)||(14071143-14071261)
chr1 (1-137)||(21277052-21277188)
chr1 (43-203)||(51299383-51299543)
chr1 (1-137)||(51726766-51726902)
chr1 (4-120)||(14169680-14169796)
chr1 (1-136)||(13642480-13642615)
chr1 (1-136)||(19466129-19466263)
chr1 (1-148)||(26056058-26056205)
chr1 (1-148)||(36509869-36510015)
chr1 (1-109)||(2972958-2973066)
chr1 (1-58)||(3979314-3979371)
chr1 (1-120)||(8092656-8092775)
chr1 (43-153)||(23082032-23082142)
chr1 (1-47)||(47411460-47411506)
chr1 (1-91)||(49141464-49141554)
chr1 (1-50)||(13641315-13641364)
chr1 (1-58)||(25787165-25787222)
chr1 (1-58)||(47136688-47136745)
chr1 (1-137)||(9633833-9633969)
chr1 (1-52)||(25786026-25786077)
chr1 (1-52)||(42248312-42248363)
chr1 (43-153)||(22766726-22766836)
chr1 (45-119)||(29001062-29001136)
chr1 (63-153)||(42246011-42246100)
chr1 (1-58)||(3978102-3978159)
chr1 (73-118)||(11897768-11897813)
chr1 (1-50)||(36511340-36511389)
chr1 (4-69)||(40811256-40811321)
chr1 (1-50)||(47411042-47411091)
chr1 (73-140)||(34258628-34258695)
chr1 (49-160)||(38280939-38281049)
chr1 (4-58)||(14390319-14390373)
chr1 (76-150)||(51300166-51300240)
chr1 (1-58)||(13929353-13929410)
chr1 (1-50)||(16217498-16217547)
chr1 (1-50)||(16218487-16218536)
chr1 (1-58)||(20953346-20953403)
chr1 (1-86)||(40109419-40109504)
chr1 (73-153)||(16757427-16757507)
chr1 (1-49)||(22167837-22167885)
chr1 (1-153)||(52742882-52743034)
[»] scaffold0003 (1 HSPs)
scaffold0003 (4-153)||(47131-47280)
[»] chr6 (23 HSPs)
chr6 (4-153)||(27440081-27440230)
chr6 (1-120)||(293579-293698)
chr6 (1-66)||(31740265-31740330)
chr6 (1-120)||(14328713-14328832)
chr6 (1-120)||(14421723-14421842)
chr6 (1-136)||(22298662-22298797)
chr6 (1-92)||(31738421-31738512)
chr6 (46-153)||(12773173-12773280)
chr6 (1-58)||(8412317-8412374)
chr6 (1-140)||(9927664-9927801)
chr6 (1-58)||(8411144-8411201)
chr6 (1-50)||(22299912-22299961)
chr6 (85-153)||(24757027-24757095)
chr6 (63-134)||(136750-136821)
chr6 (1-52)||(5311337-5311388)
chr6 (72-138)||(16268670-16268736)
chr6 (1-140)||(18139406-18139545)
chr6 (5-58)||(14326215-14326268)
chr6 (5-58)||(14419225-14419278)
chr6 (1-58)||(33807747-33807804)
chr6 (80-148)||(7312951-7313019)
chr6 (63-119)||(30231601-30231657)
chr6 (1-45)||(34084148-34084192)
[»] chr2 (36 HSPs)
chr2 (1-151)||(28109777-28109927)
chr2 (1-120)||(10367297-10367416)
chr2 (1-120)||(12959644-12959763)
chr2 (1-86)||(7037024-7037109)
chr2 (8-153)||(15850566-15850710)
chr2 (1-70)||(23177732-23177801)
chr2 (1-70)||(23588989-23589058)
chr2 (1-153)||(14509267-14509419)
chr2 (1-153)||(35799570-35799722)
chr2 (1-120)||(37868979-37869098)
chr2 (3-86)||(32614445-32614528)
chr2 (1-139)||(25570790-25570928)
chr2 (1-136)||(7983618-7983753)
chr2 (1-148)||(12852944-12853091)
chr2 (4-118)||(4829526-4829640)
chr2 (1-58)||(2581861-2581918)
chr2 (63-148)||(9472747-9472831)
chr2 (64-197)||(2277327-2277461)
chr2 (4-86)||(7490168-7490250)
chr2 (42-120)||(11575425-11575503)
chr2 (1-50)||(1624985-1625034)
chr2 (1-66)||(12958474-12958539)
chr2 (1-46)||(14510522-14510567)
chr2 (1-58)||(35801046-35801103)
chr2 (1-54)||(42246649-42246702)
chr2 (63-131)||(26204676-26204744)
chr2 (101-153)||(34467667-34467719)
chr2 (72-147)||(12095408-12095483)
chr2 (1-51)||(6706984-6707034)
chr2 (43-153)||(14714592-14714702)
chr2 (73-119)||(21664935-21664981)
chr2 (64-153)||(34147260-34147350)
chr2 (4-58)||(42027254-42027308)
chr2 (1-66)||(10368378-10368443)
chr2 (44-153)||(26205114-26205223)
chr2 (108-208)||(34513401-34513501)
[»] scaffold1974 (1 HSPs)
scaffold1974 (1-153)||(534-686)
[»] scaffold1878 (1 HSPs)
scaffold1878 (1-153)||(588-740)
[»] scaffold0290 (1 HSPs)
scaffold0290 (1-153)||(9384-9536)
[»] scaffold0122 (1 HSPs)
scaffold0122 (17-153)||(16019-16155)
[»] scaffold0015 (1 HSPs)
scaffold0015 (43-153)||(207704-207814)
[»] scaffold2127 (1 HSPs)
scaffold2127 (1-58)||(516-573)
[»] scaffold0178 (1 HSPs)
scaffold0178 (1-58)||(2266-2323)
[»] scaffold0128 (1 HSPs)
scaffold0128 (64-148)||(22104-22188)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-58)||(4219-4276)
[»] scaffold0098 (1 HSPs)
scaffold0098 (12-153)||(40977-41118)
[»] scaffold0086 (1 HSPs)
scaffold0086 (73-138)||(46667-46732)
[»] scaffold0084 (1 HSPs)
scaffold0084 (4-153)||(13110-13259)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-66)||(96218-96283)
[»] scaffold0007 (1 HSPs)
scaffold0007 (4-50)||(145878-145924)


Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 24069504 - 24069268
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  24069504 aagtgtctcaatttggtcccataactcttctgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaacattatag 24069405  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatattttagttaaaaagaggatcgtcggattgtgcatgtctattctatcttata 200  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24069404 gtggtccaccatagaccttactaagttttttaattttaaccatttgatattttagttaaaaagaggatcgtccgattgtgcatgtctattctatcttata 24069305  T
Q  201 gtgtaccatttattaactaatttttcctatattcttc 237  Q
    |||||||||||||||||||||||||||| ||||||||    
T  24069304 gtgtaccatttattaactaatttttcctctattcttc 24069268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 7770955 - 7770720
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| ||||||||||| |||||||||||||||||| | |||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| |||    
T  7770955 aagtgtttcaatttggtctcataactcttatgccgtt-atcattttggtcattttcgtctgtttttaacactaaatgtctaaggtggaccaacattatag 7770857  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatattttagttaaaaagaggatcgtcggattgtgcatgtctattctatcttata 200  Q
    ||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7770856 gtggtcctccatagaccttactaagttttttaattttaaccatttgatattttagttaaaaagaggatcgttggattgtgcatgtctattctatcttata 7770757  T
Q  201 gtgtaccatttattaactaatttttcctatattcttc 237  Q
    ||||||||||||||||||||||||||||  |||||||    
T  7770756 gtgtaccatttattaactaatttttcctccattcttc 7770720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 7796865 - 7796630
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||| |||||||||| ||||||| | |||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| |||    
T  7796865 aagtgtctcaatttggtctcataactcttctgccgtt-atcattttggtcattttcgtctgtttttaacactaaatgtctaaggtggaccaacattatag 7796767  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatattttagttaaaaagaggatcgtcggattgtgcatgtctattctatcttata 200  Q
    ||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7796766 gtggtcctccatagaccttactaagttttttaattttaaccatttgatattttagttaaaaagaggatcgttggattgtgcatgtctattctatcttata 7796667  T
Q  201 gtgtaccatttattaactaatttttcctatattcttc 237  Q
    ||||||||||||||||||||||||||||  |||||||    
T  7796666 gtgtaccatttattaactaatttttcctccattcttc 7796630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 7816146 - 7815911
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||| ||||| |||| ||||||| | |||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| |||    
T  7816146 aagtgtctcaatttggtctcataattcttctgccgtt-atcattttggtcattttcgtctgtttttaacactaaatgtctaaggtggaccaacattatag 7816048  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatattttagttaaaaagaggatcgtcggattgtgcatgtctattctatcttata 200  Q
    ||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7816047 gtggtcctccatagaccttactaagttttttaattttaaccatttgatattttagttaaaaagaggatcgttggattgtgcatgtctattctatcttata 7815948  T
Q  201 gtgtaccatttattaactaatttttcctatattcttc 237  Q
    ||||||||||||||||||||||||||||  |||||||    
T  7815947 gtgtaccatttattaactaatttttcctccattcttc 7815911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 39515257 - 39515480
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||| |||||||||| |||| |||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||| ||| |||    
T  39515257 aagtgtctcaatttggtctcataactcttttgccatttacctttttggtcatttccgtctatttttaacactaaatgtctaaggtggaccaacattatag 39515356  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatattttagttaaaaagaggatcgtcggattgtgcatgtctattctatcttata 200  Q
    |||||| | |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    | |||||    
T  39515357 gtggtccatcatagaccttactaagttttataattttaaccatttgatattttagttaaaaagaggatcgttggattgtgcatgtctat----tattata 39515452  T
Q  201 gtgtaccatttattaactaatttttcct 228  Q
    ||||||||||||||||||||||||||||    
T  39515453 gtgtaccatttattaactaatttttcct 39515480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 34617253 - 34617048
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| ||||||| |||||||| ||||| | ||||||| |||||||||| |||||||| ||||||||| |||||||| ||||||||||||| |||  ||    
T  34617253 aagtgtgtcaatttagtcccatagctcttcttccgtttatcattttggtcatttccgtcagtttttaaccctaaatgtataaggtggaccaacattacag 34617154  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatattttagttaaaaagaggatcgtcggattgtgcatgtctattctatcttata 200  Q
    |||||| ||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||     
T  34617153 gtggtccaccgtagaccttactaaattttttaattttaaccatttgatattttagttaaaaagaggatcgttggattctgcatgtctattctatcttatc 34617054  T
Q  201 gtgtac 206  Q
    ||||||    
T  34617053 gtgtac 34617048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 13367108 - 13366956
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| | ||||||||||||||| |||| |||||||||| ||||||||||| |||||  |||||||||  ||||||||||||||| |||||  || |||    
T  13367108 aagtgttttaatttggtcccataaatcttctgccgtttactattttggtcctctccgttagtttttaaccttaaatgtctaaggtgaaccaactttatag 13367009  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||| ||||||||||||| |||   ||||| |||||||  |||||||||||    
T  13367008 gtggtccaccatagaccttattaaaccttttatttttaaccgtttgatatttt 13366956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 35943969 - 35944113
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtg 103  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||||| | |||||  |||||||||  ||||||||||||||| |||||  || ||||||    
T  35943969 tgtctcaatttggtcccataaatcttatgcagtttactattttggtcatctccgttagtttttaactttaaatgtctaaggtgaaccaactttataggtg 35944068  T
Q  104 gtctaccatagaccttactaagttttttaattttaactatttgat 148  Q
     || |||||||| |||| ||| | ||||| |||||||| ||||||    
T  35944069 atccaccatagatcttattaaatcttttatttttaactgtttgat 35944113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 8095404 - 8095556
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||||||| |||||| || ||||||| |||||||||||||||||  ||||||||   ||||||||||||||| |||||  || |||    
T  8095404 aagtgtctcaatttggtcccattactcttttgtcgtttactattttggtcctttccgttagtttttaatcttaaatgtctaaggtgaaccaactttatag 8095503  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    ||| |  |||||| |||||| ||| | || ||  |||||| ||||||| ||||    
T  8095504 gtgatgcaccatataccttattaaatcttgtatctttaaccatttgatttttt 8095556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 36070236 - 36070372
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    ||||||||||||||| |||||||| |||| |||||||||| |||||||||||  ||||  || ||| ||  ||||||||||||||| |||||  || |||    
T  36070236 aagtgtctcaatttgatcccataaatcttctgccgtttactattttggtcctccccgttagtctttgaccttaaatgtctaaggtgaaccaactttatag 36070335  T
Q  101 gtggtctaccatagaccttactaagttttttaatttt 137  Q
    |||||| ||||||||||||| ||| | ||||| ||||    
T  36070336 gtggtccaccatagaccttattaaatattttattttt 36070372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 37276301 - 37276149
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||||||||| |||| |||||||||  || |||||||| || ||  ||||||||||  ||| |||||||||| ||||   ||  ||    
T  37276301 aagtgtctcaatttggtcccataaatcttttgccgtttattatattggtcctctctgttagtttttaacatcaaaagtctaaggtgaaccatatttaaag 37276202  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||  || ||||||| || ||| ||||||||||||||| ||||||| ||||    
T  37276201 gtggttcactatagaccatattaaattttttaattttaaccatttgatttttt 37276149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 19913550 - 19913665
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| ||||||||||||||||| |||| ||| ||||| |||||||||||| |||||  |||||||||  ||||| ||||||||| |||||  || |||    
T  19913550 aagtgtttcaatttggtcccataagtcttctgcggtttatcattttggtcctctccgttagtttttaaccttaaatttctaaggtgaaccaactttatag 19913649  T
Q  101 gtggtctaccatagac 116  Q
     ||||| |||||||||    
T  19913650 atggtccaccatagac 19913665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37472461 - 37472540
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtct 80  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||||||||||| | | ||||||||  |||||||||    
T  37472461 aagtgtctcaatttggtcccataagtcttttgtcgtttaccattttggtcctttccatttatttttaaccttaaatgtct 37472540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 20308663 - 20308801
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||| |||||||||| || ||||||| ||||||||| ||||| |   ||||||||  ||||||||||||||| |||||  || |||    
T  20308663 aagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttccattaatttttaaccttaaatgtctaaggtgaaccaactttatag 20308762  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaa 139  Q
     | |||  |||||||||||| ||| | ||||| ||||||    
T  20308763 atagtccgccatagaccttattaaatcttttatttttaa 20308801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 21095296 - 21095434
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||| |||||||||| || ||||||| ||||||||| ||||| |   ||||||||  ||||||||||||||| |||||  || |||    
T  21095296 aagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttccattaatttttaaccttaaatgtctaaggtgaaccaactttatag 21095395  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaa 139  Q
     | |||  |||||||||||| ||| | ||||| ||||||    
T  21095396 atagtccgccatagaccttattaaatcttttatttttaa 21095434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 2421351 - 2421199
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| |||||||||||||| || |||| |||||||||  ||||||||||| |  ||  |||||||||  ||||||||||||||| |||||  || |||    
T  2421351 aagtgtttcaatttggtcccagaaatcttctgccgtttattattttggtcctctttgttagtttttaaccttaaatgtctaaggtgaaccaactttatag 2421252  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
     ||||| | ||||||||||| ||| | ||||| |||||||  |||||| ||||    
T  2421251 atggtccatcatagaccttattaaatcttttatttttaaccgtttgatctttt 2421199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 38591065 - 38591014
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcct 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  38591065 aagtgtctcaatttggtcccataaatcttatgccgtttactattttggtcct 38591014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 39546735 - 39546616
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||||||||| | |||||||||||||| |||||||| | |||||  ||||||||||  |||||| |||| || ||||   ||  ||    
T  39546735 aagtgtctcaatttggtcccataaatattatgccgtttaccgttttggtcatctccgttagtttttaacatcaaatgtttaagatgaaccatgtttaaag 39546636  T
Q  101 gtggtctaccatagacctta 120  Q
    |||||| ||||| |||||||    
T  39546635 gtggtccaccatggacctta 39546616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 44606198 - 44606349
Alignment:
Q  2 agtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtagg 101  Q
    ||||| ||||||||||||||||| |||| | | |||||  |||||| |||| ||| |  |||||||||  ||||||||||||||| |||||  || ||||    
T  44606198 agtgtttcaatttggtcccataaatcttcttctgtttattattttgatcctctccattagtttttaaccttaaatgtctaaggtgaaccaactttatagg 44606297  T
Q  102 tggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    ||||| ||||||||||||  ||| | ||||| |||||||  |||||| ||||    
T  44606298 tggtccaccatagaccttgttaaatcttttatttttaaccgtttgatctttt 44606349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 7486142 - 7486272
Alignment:
Q  8 tcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtct 107  Q
    ||||||||||||||||| |||| ||| |||||| ||||||||||| |||||  ||||||||||  |||||||||| ||| ||||   ||  | || |||     
T  7486142 tcaatttggtcccataaatcttttgctgtttactattttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatgtttaaatgttgtcc 7486241  T
Q  108 accatagaccttactaagttttttaatttta 138  Q
    ||||||||||||| ||| ||||| |||||||    
T  7486242 accatagaccttattaaatttttaaatttta 7486272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 31625442 - 31625385
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||| |||||    
T  31625442 aagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcctctccgt 31625385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 29738349 - 29738417
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaac 69  Q
    |||||||||||||| ||| ||||| |||| ||||||||||| |||||||||| ||||| ||||||||||    
T  29738349 aagtgtctcaatttagtctcataagtcttctgccgtttacctttttggtcctctccgtttgtttttaac 29738417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43275808 - 43275859
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcct 52  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||||||||    
T  43275808 aagtgtctcaatttagtcccataactcttatgccgtttattattttggtcct 43275859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 153
Target Start/End: Original strand, 21961923 - 21962033
Alignment:
Q  43 ttttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaacta 142  Q
    |||||||||| |||||  ||||||||||  |||||||| ||||| ||||   ||  |||||||| ||||||  ||||||||| ||||||||||||||| |    
T  21961923 ttttggtcctctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccaccatatgccttactaaattttttaattttaacca 21962022  T
Q  143 tttgatatttt 153  Q
    |||||| ||||    
T  21962023 tttgatttttt 21962033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 45384360 - 45384449
Alignment:
Q  63 ttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||||  ||||| ||||||||| | ||| |||| ||||||||||||||||||| || ||| |||||||||||||||| || ||||||||    
T  45384360 ttttaaccataaatatctaaggtgtaacaacattgcaggtggtctaccatagacc-tattaatttttttaattttaactgttcgatatttt 45384449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 8395064 - 8395165
Alignment:
Q  12 tttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctacca 111  Q
    ||||||||||||| |||| | |||||||||||||||||||| |||||  |||||||||  ||||||  |||  || |||||  |||||||||||| ||||    
T  8395064 tttggtcccataattcttcttccgtttaccattttggtcctctccgttagtttttaaccttaaatggttaaaatgaaccaactttgtaggtggtccacca 8395163  T
Q  112 ta 113  Q
    ||    
T  8395164 ta 8395165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29739701 - 29739636
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgttttt 66  Q
    |||||||||||||||||||||||| | || | |||||||||||||||||| | ||||| |||||||    
T  29739701 aagtgtctcaatttggtcccataaattttcttccgtttaccattttggtcatgtccgtttgttttt 29739636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37274945 - 37275002
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||||||||| |||||||| |||| |||||||||| ||||||||||| |||||    
T  37274945 aagtgtctcaatttgttcccataaatcttctgccgtttactattttggtcctctccgt 37275002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 39222 - 39142
Alignment:
Q  40 ccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagacctta 120  Q
    ||||||||||||| || ||  ||||||||| |||||| ||||  ||||| |||||||||| |||||||| |||||||||||    
T  39222 ccattttggtcctctcggttagtttttaactctaaatatctacagtggatcaatattgtatgtggtctatcatagacctta 39142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 16363870 - 16363779
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaa 92  Q
    |||| |||||||||| |||||||| || | ||| |||||| ||||||||||| |||||  ||| |||||  ||||||||||||||| |||||    
T  16363870 aagtatctcaatttgatcccataaatcgtctgctgtttactattttggtcctctccgttagttattaactttaaatgtctaaggtgaaccaa 16363779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 43277976 - 43277921
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtc 59  Q
    ||||||||||||||||| ||| ||||||||||||||| ||||||||| | ||||||    
T  43277976 tgtctcaatttggtcccgtaaatcttatgccgtttactattttggtcatgtccgtc 43277921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 31871462 - 31871544
Alignment:
Q  10 aatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaa 92  Q
    ||||||||||||| | |||| || ||||||  |||||||||||||| ||  |||||||||  |||| ||||||||||||||||    
T  31871462 aatttggtcccatgaatcttctgtcgtttattattttggtcctttctgttagtttttaaccttaaacgtctaaggtggaccaa 31871544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 117113 - 117234
Alignment:
Q  8 tcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtct 107  Q
    |||||||| |||||||| |||| || ||||||   |||||||||| |||||  ||||||||||  ||||||||||||||   ||   ||  ||||||||     
T  117113 tcaatttgatcccataaatcttctgtcgtttattgttttggtcctctccgttagtttttaacatcaaatgtctaaggtgagtcatgtttaaaggtggtcc 117212  T
Q  108 accatagaccttactaagtttt 129  Q
    ||||||||||||||||| ||||    
T  117213 accatagaccttactaaatttt 117234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 13363594 - 13363497
Alignment:
Q  43 ttttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaac 140  Q
    |||||||||| |||||  ||||||||||| |||||||||| ||| ||||   ||  |||||||  ||||| ||||||| ||| |||||||||||||||    
T  13363594 ttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtgcaccatggaccttagtaaattttttaattttaac 13363497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 153
Target Start/End: Original strand, 21267233 - 21267342
Alignment:
Q  44 tttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactat 143  Q
    ||||||||| |||||  ||||||||||  |||| ||||||||||||||  |||  |||||||| |||||| |||| | ||| ||||| |||||||||  |    
T  21267233 tttggtcctctccgttagtttttaacatcaaatatctaaggtggaccatgattcaaggtggtccaccatatacctaattaaatttttaaattttaacctt 21267332  T
Q  144 ttgatatttt 153  Q
    ||||| ||||    
T  21267333 ttgatttttt 21267342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 39220737 - 39220874
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| |||||||| | || ||| |||| |||||||||| ||||| ||  | || ||  |||||||||  ||||||||||||||| | |||||||  |     
T  39220737 aagtgtttcaatttgattccttaagtcttctgccgtttactattttcgttatctctgttagtttttaaccttaaatgtctaaggtgaaacaatattaaaa 39220836  T
Q  101 gtggtctaccatagaccttactaagttttttaatttta 138  Q
    || ||||||||||||||||| ||| ||| | |||||||    
T  39220837 gtagtctaccatagaccttattaattttatgaatttta 39220874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41522746 - 41522677
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaaca 70  Q
    |||||| |||||||||||| |||| |||| ||||||||||  |||| ||||||||||||  |||||||||    
T  41522746 aagtgtgtcaatttggtcctataagtcttctgccgtttactgttttagtcctttccgtcaatttttaaca 41522677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 153
Target Start/End: Complemental strand, 39325832 - 39325740
Alignment:
Q  61 gtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    ||||||||||  |||||||||||||| || |   ||  |||||||||| ||||  ||||||||| ||||||||||||||| ||||||| ||||    
T  39325832 gtttttaacatcaaatgtctaaggtgaactatgtttaaaggtggtctatcatatgccttactaaattttttaattttaaccatttgatttttt 39325740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 19914964 - 19914901
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgttt 64  Q
    |||||||||||||||  ||||||| |||| | |||||||||||||||||| | ||||| |||||    
T  19914964 aagtgtctcaatttgtacccataaatcttctaccgtttaccattttggtcatatccgtttgttt 19914901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 44103312 - 44103201
Alignment:
Q  43 ttttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaa-gttttttaattttaact 141  Q
    |||||||||| |||||  ||||||||||  |||||||||||||| ||||   ||  |||||||| ||||||  ||||| |||  |||||||||||||||     
T  44103312 ttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatatgccttattaattttttttaattttaacc 44103213  T
Q  142 atttgatatttt 153  Q
    ||||||| ||||    
T  44103212 atttgatttttt 44103201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 3237478 - 3237532
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||||||||||||||| | || |||||||||| |||||| || |||||||    
T  3237478 tgtctcaatttggtcccataaatattctgccgtttacaattttgatcatttccgt 3237532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 8096599 - 8096545
Alignment:
Q  5 gtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtc 59  Q
    |||| ||||||||| |||||||||| | |||||||| ||||||||||| ||||||    
T  8096599 gtcttaatttggtctcataactcttttaccgtttactattttggtcctctccgtc 8096545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38589878 - 38589924
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttg 47  Q
    ||||| |||||||||||||||||| ||||||| ||||||| ||||||    
T  38589878 aagtggctcaatttggtcccataaatcttatgtcgtttactattttg 38589924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 24068388 - 24068445
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||||||| ||||   |||||||| | ||||||||| |||||    
T  24068388 aagtgtctcaatttggtcccataagtcttcctccgtttactaatttggtcctctccgt 24068445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 27059122 - 27059195
Alignment:
Q  80 taaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||| ||||||||||||||  |||| ||||| ||||||| ||| |||  ||||||||||| |||||| ||||    
T  27059122 taaggtagaccaatattgtagaaggtccaccatggaccttattaattttgataattttaactctttgatctttt 27059195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 31623964 - 31624021
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||| ||||||||||||||||| ||||||| ||||||  ||||| ||||| |||||    
T  31623964 aagtgtttcaatttggtcccataaatcttatgtcgtttattattttagtcctctccgt 31624021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 41867974 - 41867937
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgttt 38  Q
    |||||||||||||||||||||||| | |||||||||||    
T  41867974 aagtgtctcaatttggtcccataaattttatgccgttt 41867937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 45385852 - 45385795
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||| |||||||| ||| |||| ||||||| ||||||||||||| ||||| |||||    
T  45385852 aagtgtttcaatttgatcctataaatcttatgtcgtttaccattttagtcctctccgt 45385795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 45395091 - 45395144
Alignment:
Q  64 tttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagacc 117  Q
    |||||| | |||| |||| |||||||||||||||||||||||| | ||||||||    
T  45395091 tttaactccaaatatctatggtggaccaatattgtaggtggtccatcatagacc 45395144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 13513578 - 13513630
Alignment:
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||| |||||| |||||| ||| ||||||||||||||| ||||||| ||||    
T  13513578 gtggtccaccatataccttattaatttttttaattttaaccatttgatttttt 13513630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 13603111 - 13603163
Alignment:
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||| |||||| |||||| ||| ||||||||||||||| ||||||| ||||    
T  13603111 gtggtccaccatataccttattaatttttttaattttaaccatttgatttttt 13603163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 26393185 - 26392949
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||| |  |||||||||||||||||||||||||||||||||| ||||| ||| |||    
T  26393185 aagtgtctcaatttggtcccataactcttctgtcgtttaccattttggacacttccgtctgtttttaacactaaatgtctaaggtgaaccaacattatag 26393086  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatattttagttaaaaagaggatcgtcggattgtgcatgtctattctatcttata 200  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26393085 gtggtccaccatagaccttactaagttttttaattttaaccatttgatattttagttaaaaagaggatcgttggattgtgcatgtctattctatcttata 26392986  T
Q  201 gtgtaccatttattaactaatttttcctatattcttc 237  Q
    ||||||||||||||||||||||||||||  |||||||    
T  26392985 gtgtaccatttattaactaatttttcctccattcttc 26392949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 3533666 - 3533431
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    ||||||||||||||||||| ||||||||| | | ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||| |||    
T  3533666 aagtgtctcaatttggtccgataactcttctactgtttaccattttggtcctttccgtcagtttttaacactaaatgtctaaggtcgaccaacattatag 3533567  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatattttagttaaaaagaggatcgtcggattgtgcatgtctattctatcttata 200  Q
    | |||| ||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||     
T  3533566 gcggtccaccatagaccttactaagttttttaattttaaccatttgatattttgattaaaaagaggatcgttggattgtgcatgtctattctatcttatg 3533467  T
Q  201 gtgtaccatttattaactaatttttcctatattcttc 237  Q
    ||||||||||||  ||||||||||||||  |||||||    
T  3533466 gtgtaccattta-caactaatttttcctccattcttc 3533431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 56000345 - 56000581
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||| |||| ||||||||| |||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||| |||    
T  56000345 aagtgtctcaatttagtcctataactcttctgccgtttaccattttggtcttttccatcagtttttaacactaaatgtctaaggtggaccaacattatag 56000444  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatattttagttaaaaagaggatcgtcggattgtgcatgtctattctatcttata 200  Q
    |||||| ||| ||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| |||||||| |||||||||||||||||||    
T  56000445 gtggtccaccgtagaccttactaagttttttaattttaaccatttgatattttgattaaaaagaggatcgttggattgtgtatgtctattctatcttata 56000544  T
Q  201 gtgtaccatttattaactaatttttcctatattcttc 237  Q
    || || |||||| |||||||||||||||  |||||||    
T  56000545 gtatatcatttactaactaatttttcctccattcttc 56000581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 4 - 224
Target Start/End: Original strand, 56296254 - 56296474
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtg 103  Q
    ||||| ||||||||||||||| |||| || ||||||||||||||||  ||||||| |||||||||| |||||||||||||||||||||| ||  ||||||    
T  56296254 tgtcttaatttggtcccataattcttttgtcgtttaccattttggtaatttccgtttgtttttaaccctaaatgtctaaggtggaccaacatcataggtg 56296353  T
Q  104 gtctaccatagaccttactaagttttttaattttaactatttgatattttagttaaaaagaggatcgtcggattgtgcatgtctattctatcttatagtg 203  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||| ||    
T  56296354 gtctaccatagaccttactaagttttttaattttaaccatttgatattttagataaaaagaggatcgttagattgtgcatgtctattctatcttatactg 56296453  T
Q  204 taccatttattaactaatttt 224  Q
    |||||||||||||||||||||    
T  56296454 taccatttattaactaatttt 56296474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 29663703 - 29663899
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtg 103  Q
    |||||||||||||||||||||||||| ||||||||||||||||| || ||||||| |  |||||||| ||||||||||||||| ||||| ||| ||||||    
T  29663703 tgtctcaatttggtcccataactcttctgccgtttaccattttgatcttttccgtttaattttaacattaaatgtctaaggtgaaccaacattataggtg 29663802  T
Q  104 gtctaccatagaccttactaagttttttaattttaactatttgatattttagttaaaaagaggatcgtcggattgtgcatgtctattctatcttata 200  Q
    ||| |||||| ||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  29663803 gtccaccataaaccttactaagatttttaattttaaccacttgatattttagttaaaaagaggatcgtcggattgtacatgcctattctatcttata 29663899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 11115038 - 11114898
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||| |||||||||||||||||||||||| || ||||||||||||||| ||| |||||  |||||||||  |||||||||||| || |||||  ||||||    
T  11115038 aagtatctcaatttggtcccataactcttctgtcgtttaccattttggacctctccgttagtttttaaccttaaatgtctaagctgaaccaactttgtag 11114939  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaact 141  Q
    |||||||||||||||| ||| ||| | ||||||||||||||    
T  11114938 gtggtctaccatagactttattaaatgttttaattttaact 11114898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 153
Target Start/End: Complemental strand, 6140413 - 6140266
Alignment:
Q  6 tctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggt 105  Q
    |||||||||||| ||||||||||| || ||||||| ||||||||| |||||||  |||||||||  ||||| ||||||||| |||||  || ||||| ||    
T  6140413 tctcaatttggttccataactcttctgtcgtttactattttggtcatttccgttagtttttaaccttaaatatctaaggtgaaccaactttataggtagt 6140314  T
Q  106 ctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    | ||||||||||||| ||| | ||||| |||||||  |||||| ||||    
T  6140313 ccaccatagaccttattaaatcttttatttttaacagtttgatctttt 6140266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 34438464 - 34438610
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||| || || ||  |||||||||   ||||||||| ||||||| || ||| |||    
T  34438464 aagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctctgttagtttttaacctcaaatgtctatggtggactaacattatag 34438563  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgat 148  Q
     | ||| ||||||||||||| ||| ||||||||||| ||| |||||||    
T  34438564 atagtccaccatagaccttattaa-ttttttaatttcaaccatttgat 34438610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 44159143 - 44159289
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| |||||||||| ||| ||||||| |||||||||  ||||||||| | |||||  ||||||||  |||||| ||||||||| | ||||||| |||    
T  44159143 aagtgtttcaatttggttccacaactcttctgccgtttattattttggtcatctccgttagtttttaatcctaaatatctaaggtgaaacaatattatag 44159242  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgat 148  Q
    |||||| |||||||| |||| || | ||||||||||||||| ||||||    
T  44159243 gtggtccaccatagatcttaata-gatttttaattttaactctttgat 44159289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 38370340 - 38370502
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacact-aaatgtctaaggtggaccaatattgta 99  Q
    |||||| ||||||||||| |||||||||| || ||||||||||||||||| | |||||  |||||||||  | ||||| |||||||| |||||  |||||    
T  38370340 aagtgtatcaatttggtctcataactcttctgtcgtttaccattttggtcatctccgttagtttttaaccttaaaatgactaaggtgaaccaactttgta 38370439  T
Q  100 ggtggtctaccatagaccttactaagttttttaattttaactatttgatattttagttaaaaa 162  Q
    ||||||| |||||||| ||||  || |  ||||||||||||  |||||||||||  |||||||    
T  38370440 ggtggtccaccatagatcttataaattcatttaattttaaccctttgatattttttttaaaaa 38370502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 43419433 - 43419282
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||||| |||||||| |||||||  | |||||||||  || |||  |||||||||  ||||||| ||||||| ||||| ||| |||    
T  43419433 aagtgtctcaatttggtcccttaactcttctgccgttacctattttggtctatttcgttagtttttaaccataaatgtataaggtgaaccaacattatag 43419334  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||| |||||||| |||| | || ||||||||||||||  |||||| ||||    
T  43419333 gtggtccaccatagatcttaat-agatttttaattttaaccctttgatctttt 43419282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 28103544 - 28103479
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgttttt 66  Q
    ||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||| |||||||    
T  28103544 aagtgtctcaatttggtcccataagacttctgccgtttaccattttggtcctttccgtttgttttt 28103479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 17319100 - 17319239
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| |||||||||| |||||| |||| || ||||||| ||||||||| |  ||||  |||||||||  ||||||||||||||| |||||  |  |||    
T  17319100 aagtgtttcaatttggttccataaatcttctggcgtttactattttggtcttcaccgttagtttttaaccttaaatgtctaaggtgaaccaacttcttag 17319199  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaac 140  Q
    |||||||| |||| || ||| ||| |||||||||||||||    
T  17319200 gtggtctatcataaactttattaaattttttaattttaac 17319239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 50530561 - 50530700
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||  |||||||||||||||| |  ||||||| ||||||||| |||| ||   ||||||||  |||| |||||||||| |||||  || |||    
T  50530561 aagtgtctcaaaatggtcccataactcttctatcgtttactattttggtcatttctgttaatttttaaccttaaaagtctaaggtgaaccaactttatag 50530660  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaac 140  Q
    || ||| ||||||||||||| ||| ||||||| |||||||    
T  50530661 gtagtccaccatagaccttattaaattttttatttttaac 50530700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11113800 - 11113866
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgttttta 67  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||  |||||||    
T  11113800 aagtgtctcaatttggtctcataactcttctgccgtttaccattttggtcatttccgttagttttta 11113866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 153
Target Start/End: Original strand, 15787013 - 15787162
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggacc-aatattgtaggt 102  Q
    ||||||||||||||||||||||| || ||||||||| |||| || |||| |||||   ||||||||  ||||||||||||||| ||| ||  ||||||||    
T  15787013 tgtctcaatttggtcccataacttttctgccgtttatcattatgatcctctccgttaatttttaaccttaaatgtctaaggtgcaccaaactttgtaggt 15787112  T
Q  103 ggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    ||||||||||  || ||| ||| | |||| |||||||| ||||||| ||||    
T  15787113 ggtctaccatgaactttattaaatgtttt-attttaaccatttgatctttt 15787162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 31711150 - 31711215
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgttttt 66  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||||| |||||||    
T  31711150 aagtgtctcaatttggtctcataagtcttatgtcgtttaccattttgatcctttccgtttgttttt 31711215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 38419075 - 38418914
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| ||||||||||| ||||| |||| ||||||||||  |||| ||| | |||||  |||||||||| |||| || |||| || ||||   || |||    
T  38419075 aagtgtgtcaatttggtctcataagtcttctgccgtttactgttttagtcatctccgttagtttttaacattaaacgtttaagatgaaccatatttatag 38418976  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatattttagttaaaaa 162  Q
    |||||| ||||||  ||||||||| |||||| |||||||| ||||||| ||||  |||||||    
T  38418975 gtggtccaccatatgccttactaaatttttttattttaaccatttgattttttctttaaaaa 38418914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 35787861 - 35787993
Alignment:
Q  8 tcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtct 107  Q
    ||||||||||||||||| |||| || |||||||| |||||||||| |||||  ||||||||||  |||||||||||||  | ||   ||  ||||||||     
T  35787861 tcaatttggtcccataaatcttctgtcgtttaccgttttggtcctctccgttagtttttaacatcaaatgtctaaggtaaatcatgtttaaaggtggtcc 35787960  T
Q  108 accatagaccttactaagttttttaattttaac 140  Q
    ||||||||| ||| ||| ||||| |||||||||    
T  35787961 accatagactttattaaatttttaaattttaac 35787993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15787560 - 15787509
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcct 52  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  15787560 aagtgtctcaatttggtcccataacttttttgccgtttaccattttggtcct 15787509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 153
Target Start/End: Complemental strand, 38555289 - 38555182
Alignment:
Q  46 tggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactattt 145  Q
    ||||| |||||||  ||||||||   ||||||||||||||| |||||  |||||||||||||||||||||| ||| ||| ||||||||||| |||  |||    
T  38555289 tggtcatttccgttagtttttaatcttaaatgtctaaggtgaaccaactttgtaggtggtctaccatagactttattaaattttttaatttaaaccgttt 38555190  T
Q  146 gatatttt 153  Q
    ||| ||||    
T  38555189 gatctttt 38555182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 31712564 - 31712479
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtg 86  Q
    |||||| |||||||| |||||||| |||| | |||||||||||||||||| ||||||| | ||||||||  ||||| |||||||||    
T  31712564 aagtgtttcaatttgatcccataagtcttcttccgtttaccattttggtcatttccgtttatttttaaccttaaatatctaaggtg 31712479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33377422 - 33377365
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||| |||||    
T  33377422 aagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcctctccgt 33377365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 1188966 - 1189057
Alignment:
Q  63 ttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttta 154  Q
    ||||||| ||||||||||| |||| ||||| ||||||||||||| ||| ||||||||| ||| ||  ||||||| ||| ||||||| |||||    
T  1188966 ttttaaccctaaatgtctatggtgaaccaacattgtaggtggtccaccgtagaccttaataatttgcttaatttaaaccatttgatttttta 1189057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 52633674 - 52633600
Alignment:
Q  78 tctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||||| || |||||||| |||||||||||||||||||||| ||| |||||| |||||||| ||||||| ||||    
T  52633674 tctaaggtagatcaatattgaaggtggtctaccatagacctta-taaatttttttattttaacaatttgatctttt 52633600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 86866 - 86951
Alignment:
Q  6 tctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggacca 91  Q
    ||||||||||||||||||| | || ||||||||||  |||||||| | |||||  ||||||||||  |||||||||||||| ||||    
T  86866 tctcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaacca 86951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1273491 - 1273434
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||||||| ||||||| ||||| | ||||||||||| |||||    
T  1273491 aagtgtctcaatttggtcccataagtcttatgtcgtttgctattttggtcctctccgt 1273434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 2162733 - 2162822
Alignment:
Q  64 tttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||| |||||| | |||||| |||||| ||| ||||||||| ||||||||||||| ||| ||||| |||||||||  |||||| ||||    
T  2162733 tttaaccctaaatatgtaaggttgaccaacattttaggtggtccaccatagaccttattaattttttcaattttaacactttgatctttt 2162822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5687233 - 5687282
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  5687233 aagtgtctcaatttggtcccataaatcttttgccgtttactattttggtc 5687282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21104368 - 21104311
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||| ||||  |||| || |||||||||||||||||||||||||    
T  21104368 aagtgtctcaatttggtctcatatgtcttctgtcgtttaccattttggtcctttccgt 21104311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27408821 - 27408870
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||    
T  27408821 aagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtc 27408870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 28102154 - 28102219
Alignment:
Q  21 ataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtg 86  Q
    |||| |||| |||||||||||||||||||| ||||||| | ||||||||  |||||||||||||||    
T  28102154 ataagtcttctgccgtttaccattttggtcatttccgtttatttttaaccttaaatgtctaaggtg 28102219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 52660272 - 52660187
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtg 86  Q
    |||| ||| |||| |||||||||| |||| ||||||||||||||||| || |||| || ||||||||||  ||||||||| |||||    
T  52660272 aagtatcttaattcggtcccataaatcttctgccgtttaccattttgatcatttctgtttgtttttaaccttaaatgtcttaggtg 52660187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 53400243 - 53400300
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||| ||||| |||||    
T  53400243 aagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctctccgt 53400300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 55953907 - 55953859
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcct 52  Q
    ||||||||||||||||| ||| ||||||||||||||| |||||||||||    
T  55953907 tgtctcaatttggtcccgtaaatcttatgccgtttactattttggtcct 55953859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 154
Target Start/End: Complemental strand, 44503672 - 44503581
Alignment:
Q  63 ttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttta 154  Q
    ||||||| ||||||||||| |||| ||||| ||||||| ||||| ||| ||||||||| ||| ||  ||||||| ||| ||||||| |||||    
T  44503672 ttttaaccctaaatgtctatggtgaaccaacattgtagatggtccaccgtagaccttaataatttgcttaatttaaaccatttgatttttta 44503581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 50531814 - 50531760
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttc 55  Q
    ||||||||||||||||||||||||||||| || ||||||| ||||| ||| ||||    
T  50531814 aagtgtctcaatttggtcccataactcttttgtcgtttactattttagtcatttc 50531760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5688695 - 5688646
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    ||||||||||||||||| |||||| ||||||| ||||||| |||||||||    
T  5688695 aagtgtctcaatttggttccataaatcttatgtcgtttactattttggtc 5688646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33376276 - 33376333
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||||||| |||| || ||||||| ||||| ||||| |||||    
T  33376276 aagtgtctcaatttggtcccataaatcttctgtcgtttactattttagtcctctccgt 33376333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37560357 - 37560300
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||||||| ||||| | ||||||| || |||||||| |||||    
T  37560357 aagtgtctcaatttggtcccataaatcttacgacgtttactatcttggtcctctccgt 37560300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38417611 - 38417668
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||| ||||||||||||||||| ||||||| ||||||| |||| |||||| |||||    
T  38417611 aagtgtgtcaatttggtcccataaatcttatgtcgtttactatttcggtcctctccgt 38417668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 44128392 - 44128335
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||| ||||  ||| ||||||||||||||| ||||||||||| |||||    
T  44128392 aagtgtctcaatttagtcctttaaatcttatgccgtttactattttggtcctctccgt 44128335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 11094584 - 11094668
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggt 85  Q
    |||||||| |||||||||| |||| | || ||||||||||  |||||||||| | |||  ||||||||||  |||||||||||||    
T  11094584 aagtgtcttaatttggtcctataaattttctgccgtttactgttttggtcctcttcgttagtttttaacatcaaatgtctaaggt 11094668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 148
Target Start/End: Complemental strand, 11438560 - 11438476
Alignment:
Q  64 tttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgat 148  Q
    |||||| | ||||||||| |||||||||| | ||||||||||| |||||| ||| || ||| || |||||||| ||| |||||||    
T  11438560 tttaaccccaaatgtctacggtggaccaacagtgtaggtggtccaccataaaccctattaatttctttaatttaaaccatttgat 11438476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 13533244 - 13533165
Alignment:
Q  73 aaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    ||||||||| |||||||||| ||| ||| | ||| ||||||||||||| ||| ||||| ||||||||| ||||||| ||||    
T  13533244 aaatgtctatggtggaccaacattatagatagtccaccatagaccttattaa-tttttcaattttaaccatttgatctttt 13533165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 26788585 - 26788637
Alignment:
Q  6 tctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||| ||||||||| |||| |||||||||| ||||||||||| |||||    
T  26788585 tctcaatttcgtcccataaatcttctgccgtttactattttggtcctctccgt 26788637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 48207775 - 48207625
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    ||||||||||||||||||  ||||||||| | |||||||| ||| ||||||  || ||   ||||||||  ||||||||||||||| |||||  || ||     
T  48207775 aagtgtctcaatttggtcatataactcttctaccgtttacaattgtggtcccctctgttattttttaaccttaaatgtctaaggtgaaccaa-cttataa 48207677  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    | | |||||||||||  ||| ||| |||||||||||||||  |||||| ||||    
T  48207676 g-gatctaccatagattttattaaattttttaattttaaccgtttgatctttt 48207625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 27410740 - 27410690
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcct 52  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||||||||    
T  27410740 aagtgtctcaatttggtcc-ataaatcttcttccgtttaccattttggtcct 27410690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 55952883 - 55952934
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcct 52  Q
    |||||| ||||||||||| ||||||||||||| ||||||  |||||||||||    
T  55952883 aagtgtttcaatttggtctcataactcttatgtcgtttattattttggtcct 55952934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 29664716 - 29664746
Alignment:
Q  198 atagtgtaccatttattaactaatttttcct 228  Q
    |||||||||||||||||||||||||||||||    
T  29664716 atagtgtaccatttattaactaatttttcct 29664746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 34439711 - 34439669
Alignment:
Q  8 tcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    ||||||||||||||||| |||| |||||||||| |||||||||    
T  34439711 tcaatttggtcccataaatcttctgccgtttactattttggtc 34439669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15446728 - 15446671
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||| ||||||||||||||||| | || | |||||||| ||||||||||| |||||    
T  15446728 aagtgtttcaatttggtcccataaattttctaccgtttactattttggtcctctccgt 15446671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 28657110 - 28657022
Alignment:
Q  64 tttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||| | |||||||| |||||||||||  ||||||||| || ||| ||||||||| ||| ||||||||||| | || |||||| ||||    
T  28657110 tttaaccccaaatgtcttaggtggaccaaccttgtaggtgatccaccgtagaccttattaa-ttttttaatttcatctttttgatctttt 28657022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 44126664 - 44126705
Alignment:
Q  9 caatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    |||||||||||| ||| ||||||||||||||| |||||||||    
T  44126664 caatttggtcccttaaatcttatgccgtttactattttggtc 44126705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46796084 - 46796027
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||||||| ||||   |||||||| ||| ||||||| |||||    
T  46796084 aagtgtctcaatttggtcccataagtcttcctccgtttactattgtggtcctctccgt 46796027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 15445494 - 15445637
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||| | ||  |||| |||||||  |  |||||||||| |||||    |||||||  ||||||||| | ||| | ||  ||||  |    
T  15445494 aagtgtctcaatttggtctcttatgtcttttgccgttatcttttttggtcctatccgttacattttaaccataaatgtcttatgtgtaacagcattgctg 15445593  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactattt 145  Q
    ||||||||||||||| |||| ||| |||||||||||||| |||||    
T  15445594 gtggtctaccataga-cttattaaattttttaattttaattattt 15445637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 40445488 - 40445524
Alignment:
Q  63 ttttaacactaaatgtctaaggtggaccaatattgta 99  Q
    ||||||| | |||||||||||||||||||||||||||    
T  40445488 ttttaactcaaaatgtctaaggtggaccaatattgta 40445524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 53401440 - 53401389
Alignment:
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||||||||||||||| | ||| |||||||||||||||| |||||| ||||    
T  53401440 gtggtctaccatagacct-attaaattttttaattttaactgtttgatctttt 53401389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 48254946 - 48254723
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||| ||  |||||||||  |||||||| ||||||||||||||||||||| ||| |||    
T  48254946 aagtgtctca-tttggtcacataactcttctgccgtttaccattttagttttttccgtctaattttaacattaaatgtctaaggtggaccaacattatag 48254848  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatattttagttaaaaagaggatcgtcggattgtgcatgtctattctatcttata 200  Q
    |||||| |||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  48254847 gtggtccaccataaaccttactaagttttttaattttaaccacttgatattttagttaaaaagaggatcgtcggattgtgcatgcctattctatcttata 48254748  T
Q  201 gtgtaccatttattaactaattttt 225  Q
    |||||||||||||||||||||||||    
T  48254747 gtgtaccatttattaactaattttt 48254723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 43346505 - 43346268
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| ||||||||||| |||||||||| || |||||| |||||||||| ||| |||||||||||||| |||||||||||||||||||||| ||| |||    
T  43346505 aagtgtgtcaatttggtctcataactcttctgtcgtttatcattttggtcattttcgtctgtttttaaccctaaatgtctaaggtggaccaacattatag 43346406  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatattttagttaaaaagaggatcgtcggattgtgcatgtctattctatcttata 200  Q
    |||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||| || | |||||||||||| ||| |||||||||    
T  43346405 gtggtccaccatagaccttactaaattttttaattttaaccatttaatattttagttaaaaagaggattgttgaattgtgcatgtccattatatcttata 43346306  T
Q  201 gtgtaccatttattaa-ctaatttttcctatattcttc 237  Q
    ||||||||||||||||  |||||||||||| |||||||    
T  43346305 gtgtaccatttattaatttaatttttcctacattcttc 43346268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 21127983 - 21128178
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||| |||    
T  21127983 aagtgtgtcaatttggtcccataactcttctgccgtttaccattttggtcatttccgtctgtttttaaccctaaatgtctaaggtggaccaacattatag 21128082  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatattttagttaaaaagaggatcgtcggattgtgcatgtctattctatct 196  Q
    |||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||| || | |||||||||||| ||| |||||    
T  21128083 gtggtccaccatagaccttacaaagttttttaattttaaccatttgatattttagttaaaaagatgattgttgaattgtgcatgtccattatatct 21128178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 12062442 - 12062290
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||||||| |||||| ||| |||||| ||||||||| ||||| |  |||||||||  ||||||||||||||| |||||  || |||    
T  12062442 aagtgtctcaatttggtcccattactcttttgctgtttactattttggtcatttccattagtttttaaccttaaatgtctaaggtgaaccaactttatag 12062343  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    ||| || |||||| |||||| ||| | || || ||||||| ||||||| ||||    
T  12062342 gtgatccaccatataccttattaaatcttgtatttttaaccatttgatttttt 12062290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 51400273 - 51400420
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||| ||||||||| | ||  ||||| ||||||||||||||||||||| ||||||||||| ||||||||| ||||| | |||| || | |    
T  51400273 aagtgtctcaatttagtcccataaattttcagccgtataccattttggtcctttccgtttgtttttaacattaaatgtcttaggtgaatcaattttattg 51400372  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgat 148  Q
    ||| ||  ||||| | |||||||| | ||||| |||||||| ||||||    
T  51400373 gtgatcctccataaatcttactaaatcttttatttttaactgtttgat 51400420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 23559877 - 23560029
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    ||||||||||||||| |||||||| |||| || ||||||| ||||||||||| |||||  |||||||||  ||| |||||||| || |||||  || |||    
T  23559877 aagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctctccgttagtttttaaccttaattgtctaagatgaaccaactttatag 23559976  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||| |||||||| |||| ||| | ||||| |||||| | |||||| ||||    
T  23559977 gtggtccaccatagatcttattaaatcttttatttttaattgtttgatctttt 23560029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 48867488 - 48867344
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| ||||||||||||||| | ||||    ||||||| | | |||||||||| ||  |||||||||  ||||||||||||||| |||||  ||||||    
T  48867488 aagtgtgtcaatttggtcccattagtctttctacgtttactaatgtggtcctttctgttagtttttaaccttaaatgtctaaggtgaaccaactttgtag 48867389  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactattt 145  Q
    |||||||||||||||| ||| |||  ||| |||||||||| ||||    
T  48867388 gtggtctaccatagactttattaaaatttgtaattttaaccattt 48867344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 7822044 - 7821892
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||||| ||  |||| |||||||  |  ||||||| || |||||    |||||||  ||||||||||||||| | ||| |||| ||    
T  7822044 aagtgtctcaatttggtcccttatgtcttttgccgttacctcttttggtactatccgttacattttaaccataaatgtctaaggtgtaacaacattgcag 7821945  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    ||||||||||||||||||    || |||||||||||||||| |||||| ||||    
T  7821944 gtggtctaccatagacctattaaatttttttaattttaactgtttgatctttt 7821892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 17350160 - 17350008
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||||| ||  |||| | | |||  |  |||||||||| |||||  ||||||||||  |||||||||||||| ||||   ||  ||    
T  17350160 aagtgtctcaatttggtcccttatgtcttctcctgttacctcttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaag 17350061  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||| ||||||  ||||||||| ||||||||||||||| ||||||| ||||    
T  17350060 gtggtccaccatatgccttactaaattttttaattttaaccatttgatttttt 17350008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 25583176 - 25583323
Alignment:
Q  5 gtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtgg 104  Q
    |||||||||||||||||||| |||| |||||||||| ||||||||||| || ||   ||||||||  |||||||||||||  || | |||||  |||||     
T  25583176 gtctcaatttggtcccataagtcttctgccgtttactattttggtcctctctgttaatttttaaccttaaatgtctaagg-cgaactatattaaaggtgc 25583274  T
Q  105 tctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    || ||||||| |||||  || |  ||||||||||||| |||||||||||    
T  25583275 tccaccataggccttataaattcatttaattttaactttttgatatttt 25583323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 26798961 - 26798817
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtg 103  Q
    ||||||||||||||||||||| ||||   |||||||||||||||||||| |||||  |||||||||  ||||||  ||| | | |||||  |||||||||    
T  26798961 tgtctcaatttggtcccataattcttcctccgtttaccattttggtcctctccgttagtttttaaccttaaatggttaaagcgaaccaactttgtaggtg 26798862  T
Q  104 gtctaccatagaccttactaagttttttaattttaactatttgat 148  Q
    ||| |||||| || ||| |||    ||||||||||||| ||||||    
T  26798861 gtccaccatacactttattaaaaaatttaattttaactgtttgat 26798817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 5123329 - 5123255
Alignment:
Q  73 aaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgat 148  Q
    |||||| |||| |||||||| |||||| |||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  5123329 aaatgtttaagatggaccaacattgtatgtggtctaccatagaccttattaa-ttttttaattttaaccatttgat 5123255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 153
Target Start/End: Original strand, 8371281 - 8371430
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtg 103  Q
    |||||||||||||| |||||| |||| ||| |||||| ||||||||||| |||||  ||||||||||  |||| ||||| | | |||    ||  |||||    
T  8371281 tgtctcaatttggttccataaatcttctgcagtttactattttggtcctctccgttagtttttaacatcaaatatctaaagcgaaccgtacttagaggtg 8371380  T
Q  104 gtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    ||| ||||| ||||||| ||| |||||||||||||||  |||||| ||||    
T  8371381 gtccaccatggaccttagtaaattttttaattttaaccctttgatttttt 8371430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 53808376 - 53808528
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatat-tgta 99  Q
    |||||||||||| ||||||||||| ||||||| ||||||| ||||||||| | ||| |  ||||||||||  |||| ||||||||| | | |||| |  |    
T  53808376 aagtgtctcaatctggtcccataaatcttatgtcgtttactattttggtcatctccattagtttttaacatcaaatttctaaggtgaatc-atatctaaa 53808474  T
Q  100 ggtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    ||||||| |||||| |||||| ||| ||||| |||||||||  |||||| ||||    
T  53808475 ggtggtccaccataaaccttattaaatttttaaattttaaccctttgatttttt 53808528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 11219488 - 11219640
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||| ||| | |||| |||||||||| ||||||||| | |||||  | ||||||||  |||  ||||||||| ||||   ||  ||    
T  11219488 aagtgtctcaatttggtctcatgagtcttctgccgtttactattttggtcatctccgttagattttaacatcaaaattctaaggtgaaccatatttaaag 11219587  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||  |||||||| | || ||| ||||||||||||||| ||||||| ||||    
T  11219588 gtggttcaccatagatcgtattaaattttttaattttaaccatttgatttttt 11219640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 39133075 - 39133227
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||||| ||  |||| |  ||||  |  |||||||||| || ||  ||||||||||  |||||||||||||| ||||   ||  ||    
T  39133075 aagtgtctcaatttggtcccttatgtcttctctcgttacctcttttggtcctctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaag 39133174  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||| ||||||  ||||||||| ||||||||||||||| ||||||| ||||    
T  39133175 gtggtccaccatatgccttactaaattttttaattttaaccatttgatttttt 39133227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 35633347 - 35633436
Alignment:
Q  63 ttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||||  ||||||||||||||| | ||| |||| ||||||||||||||||||| || ||| ||||| |||||||| |||| ||||||||    
T  35633347 ttttaaccataaatgtctaaggtgtaacaacattgcaggtggtctaccatagacc-tattaaatttttaaattttaattattcgatatttt 35633436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 47855396 - 47855339
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||||||||||||| |||| |||| |||||||||| ||||||||||| |||||    
T  47855396 aagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcctctccgt 47855339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 49122060 - 49122003
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||| ||||| | || |||||||||||||||||||| |||||||    
T  49122060 aagtgtctcaatttggtctcataagttttctgccgtttaccattttggtcttttccgt 49122003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 54654024 - 54653967
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||||||| |||| || ||||||| ||||||||||| |||||    
T  54654024 aagtgtctcaatttggtcccataattcttctgtcgtttactattttggtcctctccgt 54653967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 19253057 - 19253003
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||| |||||||| | || |||||||||||||||||||||| |||||    
T  19253057 tgtctcaatttgatcccataaatattctgccgtttaccattttggtcctgtccgt 19253003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 42633943 - 42633893
Alignment:
Q  2 agtgtctcaatttggtcccataactcttatgccgtttaccattttggtcct 52  Q
    ||||||||||||||||||||||| ||||||| ||||||  |||||||||||    
T  42633943 agtgtctcaatttggtcccataaatcttatgtcgtttattattttggtcct 42633893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 11220716 - 11220651
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgttttt 66  Q
    ||||||||||||||||||| |||| |||| || ||||||| ||||||||||  ||||| |||||||    
T  11220716 aagtgtctcaatttggtcctataaatcttctgtcgtttactattttggtcccctccgtttgttttt 11220651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29536772 - 29536829
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||||||| |||| |  ||||||| ||||||||||| |||||    
T  29536772 aagtgtctcaatttggtcccataaatcttctttcgtttactattttggtcctctccgt 29536829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32980510 - 32980461
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    ||||||||||||||||||| |||| |||| |||||||||| |||||||||    
T  32980510 aagtgtctcaatttggtcctataaatcttctgccgtttactattttggtc 32980461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41386188 - 41386245
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| |||||    
T  41386188 aagtgtctcaatttggttccataaatcttacgacgtttactattttggtcctctccgt 41386245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42632764 - 42632821
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||||||||| |||||||| ||||||| ||||||| ||||| ||||| |||||    
T  42632764 aagtgtctcaatttgatcccataaatcttatgtcgtttactattttagtcctctccgt 42632821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 2124096 - 2124136
Alignment:
Q  10 aatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  2124096 aatttggtcccataaatcttatgccgtttactattttggtc 2124136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 21074263 - 21074183
Alignment:
Q  73 aaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||| || |||||||||| ||| ||| | ||| ||||||||||||| ||| ||||| |||||||||  |||||||||||    
T  21074263 aaatgtatatggtggaccaacattatagatagtccaccatagaccttattaattttttcaattttaaccctttgatatttt 21074183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 55423526 - 55423605
Alignment:
Q  73 aaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||||| |||||||||||  |||||||||||| ||| ||||||||| ||| ||||||||||| | || |||||| ||||    
T  55423526 aaatgtcttaggtggaccaaccttgtaggtggtccaccgtagaccttattaa-ttttttaatttcatctttttgatctttt 55423605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10987711 - 10987660
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcct 52  Q
    |||||||||||||||||||||||| | |||||||||||   |||||||||||    
T  10987711 aagtgtctcaatttggtcccataaattttatgccgttttttattttggtcct 10987660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12060716 - 12060767
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcct 52  Q
    |||||||||||||||| | ||||||| || |||||||||| |||||||||||    
T  12060716 aagtgtctcaatttggcctcataactattttgccgtttactattttggtcct 12060767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 135
Target Start/End: Complemental strand, 21515603 - 21515533
Alignment:
Q  64 tttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaatt 135  Q
    |||||| | |||||| | ||||||| ||||||||||||||||| |||||| |||||| ||| ||||||||||    
T  21515603 tttaactccaaatgtattaggtggatcaatattgtaggtggtccaccatataccttattaa-ttttttaatt 21515533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 136
Target Start/End: Original strand, 46495627 - 46495690
Alignment:
Q  73 aaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattt 136  Q
    |||||| | ||||| ||||| ||||||||||||| | ||||||||||| ||| |||||||||||    
T  46495627 aaatgtattaggtgaaccaacattgtaggtggtccatcatagaccttattaatttttttaattt 46495690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 48254722 - 48254679
Alignment:
Q  196 ttatagtgtaccatttattaactaatttttcctatattcttcga 239  Q
    ||||||||||| |||||||||||||||||||||  |||||||||    
T  48254722 ttatagtgtacaatttattaactaatttttcctccattcttcga 48254679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 54752674 - 54752725
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcct 52  Q
    |||||||||||||||||||  ||  ||||||||||||||| |||||||||||    
T  54752674 aagtgtctcaatttggtcctgtatatcttatgccgtttactattttggtcct 54752725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 34903010 - 34902900
Alignment:
Q  43 ttttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaacta 142  Q
    |||||||| | |||||  ||||||||||| |||||||||| ||| ||||   ||  |||||||  ||||| ||||||| ||| |||||||||||||||      
T  34903010 ttttggtcatctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtgcaccatggaccttagtaaattttttaattttaacct 34902911  T
Q  143 tttgatatttt 153  Q
    |||||| ||||    
T  34902910 tttgatttttt 34902900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 41387488 - 41387434
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||||  ||||  |||||||| ||||||||||| |||||    
T  41387488 tgtctcaatttggtcccataaaccttacaccgtttactattttggtcctctccgt 41387434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 51401409 - 51401371
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgttta 39  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  51401409 aagtgtctcaatttggtcccataaatcttctgccgttta 51401371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 35174440 - 35174311
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| ||||  |||||||||||||||| |  ||||||| ||||||||| |||| ||   ||||||||  |||| |||||||||| |||||  || |||    
T  35174440 aagtgtttcaaaatggtcccataactcttctatcgtttactattttggtcatttctgttaatttttaaccttaaaagtctaaggtgaaccaactttatag 35174341  T
Q  101 gtggtctaccatagaccttactaagttttt 130  Q
    || ||| || | |||||||| ||| |||||    
T  35174340 gtagtccacgagagaccttattaaattttt 35174311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 47808164 - 47808107
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||| ||||| |||| || ||||| | ||||||||||| |||||    
T  47808164 aagtgtctcaatttggtctcataaatcttctgtcgtttgctattttggtcctctccgt 47808107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 51825679 - 51825630
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    |||||| ||||||||||||||||| |||| || ||||||| |||||||||    
T  51825679 aagtgtttcaatttggtcccataaatcttctgtcgtttactattttggtc 51825630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 13078006 - 13077962
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttgg 48  Q
    ||||| ||||||||||||||| ||||||| ||||||| |||||||    
T  13078006 tgtcttaatttggtcccataaatcttatgtcgtttactattttgg 13077962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 29537191 - 29537143
Alignment:
Q  10 aatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||| ||||||||| |||| |||||||||| ||||||||||| |||||    
T  29537191 aatttcgtcccataaatcttctgccgtttacaattttggtcctctccgt 29537143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 31282521 - 31282442
Alignment:
Q  73 aaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||| ||| |||||||||||  |||||||||||| ||| ||||||||| ||| ||||||||||| | || |||||| ||||    
T  31282521 aaatatcttaggtggaccaaccttgtaggtggtccaccgtagaccttattaa-ttttttaatttcatctttttgatctttt 31282442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 43103349 - 43103297
Alignment:
Q  6 tctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||||||  ||||| | || |||||||||| |||||||||||||||||    
T  43103349 tctcaatttggtttcataaattttctgccgtttactattttggtcctttccgt 43103297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 145; Significance: 2e-76; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 45719673 - 45719909
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||| ||||||||| |||||||||| ||  |||||||||||||||  ||| |||| |||||||||||||||||||||||||||||||| ||| |||    
T  45719673 aagtgtctaaatttggtctcataactcttctgttgtttaccattttggtttttttcgtcagtttttaacactaaatgtctaaggtggaccaacattatag 45719772  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatattttagttaaaaagaggatcgtcggattgtgcatgtctattctatcttata 200  Q
    ||| || |||||| |||||||||||||||||||||||||| | ||||||||||  |||||||||||||||| |||||||||||||||||||||||||||     
T  45719773 gtgctccaccataaaccttactaagttttttaattttaaccaattgatattttgattaaaaagaggatcgttggattgtgcatgtctattctatcttatg 45719872  T
Q  201 gtgtaccatttattaactaatttttcctatattcttc 237  Q
    |||||||||||| |||||||||||||||  |||||||    
T  45719873 gtgtaccatttactaactaatttttcctccattcttc 45719909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 46458771 - 46458652
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||||||||| |||| | |||||||||||||||||||| ||||| ||||||||||  ||||||||||||||| |||||  || |||    
T  46458771 aagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtcctctccgtttgtttttaaccttaaatgtctaaggtgaaccaactttatag 46458672  T
Q  101 gtggtctaccatagacctta 120  Q
    || ||| |||||||||||||    
T  46458671 gtagtccaccatagacctta 46458652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 26406183 - 26406335
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    ||||||||||||||| || |||||||||| ||||||||| |||||||||| | |||||   ||||||||  ||||||||||||||| |||||  ||||||    
T  26406183 aagtgtctcaatttgatctcataactcttctgccgtttaacattttggtcatctccgttattttttaaccttaaatgtctaaggtgaaccaactttgtag 26406282  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||| ||||||||  |||  || |  ||||||||||||  |||||||||||    
T  26406283 gtggtccaccatagatattataaattcatttaattttaaccctttgatatttt 26406335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 160
Target Start/End: Original strand, 8661783 - 8661900
Alignment:
Q  43 ttttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaacta 142  Q
    ||||||||| | ||||| ||||||||| |||||||||||||||| | ||| ||||||||||||| |||||| |||||| ||| ||||||||||| |||      
T  8661783 ttttggtccctcccgtcagtttttaaccctaaatgtctaaggtgaatcaaaattgtaggtggtccaccatataccttaataaattttttaatttaaacat 8661882  T
Q  143 tttgatattttagttaaa 160  Q
    |||||| ||||| |||||    
T  8661883 tttgatcttttatttaaa 8661900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 8661924 - 8662017
Alignment:
Q  43 ttttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattt 136  Q
    ||||||||| ||||||| ||||||||| |||||||| ||||||||| ||| ||||||||||||| |||||| |||||| ||| |||||||||||    
T  8661924 ttttggtcccttccgtcagtttttaaccctaaatgtttaaggtggatcaaaattgtaggtggtccaccatataccttaataaattttttaattt 8662017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 33459601 - 33459449
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||||||||| ||||   |||||||| | | ||||| |||| ||  |||||||||  ||| ||||||||||| |||||  ||||||    
T  33459601 aagtgtctcaatttggtcccataagtcttcctccgtttactaatgtggtcttttctgttagtttttaaccttaactgtctaaggtgaaccaactttgtag 33459502  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||||||||| ||| ||| |||  ||| ||||||||||  |||||||||||    
T  33459501 gtggtctaccatggactttattaaaatttgtaattttaaccgtttgatatttt 33459449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 24873655 - 24873590
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgttttt 66  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| |||||||    
T  24873655 aagtgtctcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgtttgttttt 24873590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 35484361 - 35484217
Alignment:
Q  8 tcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtct 107  Q
    ||||||| |||||||||||||| |||| ||  | ||||||||||  | |||  ||||||||| |||||||||||||||| ||||| ||| |||||||||     
T  35484361 tcaatttagtcccataactcttctgccattacctattttggtccacttcgttagtttttaaccctaaatgtctaaggtgaaccaacattataggtggtcc 35484262  T
Q  108 accatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||||| |||| | || ||||||||||||||  |||||| ||||    
T  35484261 accatagatcttaat-agatttttaattttaaccctttgatctttt 35484217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 132057 - 131905
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| || |||||||||||||| ||||   |||||||| | | || || | |||||  |||||||||  ||||||||||||||| |||||  |||||     
T  132057 aagtgtgtcgatttggtcccataagtcttcctccgtttactaatgtgatcatctccgttagtttttaaccttaaatgtctaaggtgaaccaactttgtaa 131958  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||| |||||||| || ||| ||| |||||||||||||||  |||||| ||||    
T  131957 gtggactaccataaactttattaaattttttaattttaaccgtttgatctttt 131905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 24872053 - 24872133
Alignment:
Q  6 tctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtg 86  Q
    |||| |||||||| ||||| |||| | ||||||||||||||| |||||||||| ||||||||||  |||||||||| ||||    
T  24872053 tctctatttggtctcataagtctttttccgtttaccattttgatcctttccgtttgtttttaaccttaaatgtctatggtg 24872133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 28325201 - 28325333
Alignment:
Q  72 taaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgat-attttagttaaaaagaggatcg 170  Q
    |||||||||||||||||||||  |||||||||||||||||||||| ||| |||  |||| ||||| |||  ||||||  ||||  || ||| |||||||     
T  28325201 taaatgtctaaggtggaccaactttgtaggtggtctaccatagactttattaaaattttaaatttaaaccgtttgatcttttttatttaaaggaggatca 28325300  T
Q  171 tcggattgtgcatgtctattctatcttatagtg 203  Q
    | |||||| ||| ||||||| ||||||| ||||    
T  28325301 ttggattgcgcaagtctattttatcttacagtg 28325333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19278411 - 19278462
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcct 52  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||||    
T  19278411 aagtgtctcaatttggtcccataattcttctgccgtttactattttggtcct 19278462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 25154994 - 25154855
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    ||||||||||||||  || ||||| |||| | | ||||| |||||||||| | ||||| ||||||||||  ||||||||||||||| |||||  || ||     
T  25154994 aagtgtctcaatttaatctcataaatcttcttctgtttatcattttggtcatctccgtttgtttttaaccttaaatgtctaaggtgaaccaactttataa 25154895  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaac 140  Q
    |||||| |||||| | |||| ||| | ||||| |||||||    
T  25154894 gtggtccaccataaaacttattaaatcttttatttttaac 25154855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 14109104 - 14108990
Alignment:
Q  26 tcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaag 125  Q
    |||| ||||||||||| |||| ||||| |||||  ||||||||||  |||||||||||||| ||||   ||  |||||||| ||||||||||||| |||     
T  14109104 tcttttgccgtttaccgttttagtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttattaaa 14109005  T
Q  126 ttttttaattttaac 140  Q
     |||| |||||||||    
T  14109004 attttaaattttaac 14108990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 14419061 - 14418947
Alignment:
Q  26 tcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaag 125  Q
    |||| ||||||||||| |||| ||||| |||||  ||||||||||  |||||||||||||| ||||   ||  |||||||| ||||||||||||| |||     
T  14419061 tcttttgccgtttaccgttttagtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttattaaa 14418962  T
Q  126 ttttttaattttaac 140  Q
     |||| |||||||||    
T  14418961 attttaaattttaac 14418947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 36703005 - 36702951
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||||||||||||||| | || |||||||||| |||||||||||||||||    
T  36703005 tgtctcaatttggtcccataaatattctgccgtttactattttggtcctttccgt 36702951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 7346043 - 7346123
Alignment:
Q  72 taaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    ||||||||||||||| | ||  |||| ||||||||||||||||||| || ||| |||||||||||||||| |||||| ||||    
T  7346043 taaatgtctaaggtgtaacagcattgcaggtggtctaccatagacc-tattaaattttttaattttaactgtttgatctttt 7346123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19279670 - 19279613
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||||||| | || || ||||||| |||||||||||||||||    
T  19279670 aagtgtctcaatttggtcccataaattttttgtcgtttactattttggtcctttccgt 19279613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 22746378 - 22746321
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||| |||| |||||    
T  22746378 aagtgtctcaatttggtcccataaatcttgtgccgtttactattttgatcctctccgt 22746321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25153716 - 25153781
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgttttt 66  Q
    |||||||||||||||||||||||| |||| | ||||||||| |||||||| | ||||| |||||||    
T  25153716 aagtgtctcaatttggtcccataaatcttcttccgtttaccgttttggtcttgtccgtgtgttttt 25153781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46674992 - 46674935
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||| |||||||||||||| |||| |||||||||| ||||||||||| |||||    
T  46674992 aagtgtctcgatttggtcccataaatcttttgccgtttactattttggtcctctccgt 46674935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 153
Target Start/End: Complemental strand, 48755603 - 48755455
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtg 103  Q
    |||||||||||| |||| ||  | || |||||||  | ||||||||||| |||||    |||||||  ||||| ||||||||| | ||| |||| |||||    
T  48755603 tgtctcaatttgatcccttatgttttttgccgttacctattttggtcctatccgttacattttaaccataaatatctaaggtgtaacaacattgcaggtg 48755504  T
Q  104 gtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||||||||| | || ||| |||||||||||||||| || ||||||||    
T  48755503 gtctaccatagatc-tattaaattttttaattttaactgttcgatatttt 48755455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 43930381 - 43930465
Alignment:
Q  5 gtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggac 89  Q
    ||||||||||||||| |||| |||| || ||||||| ||||||||||| || ||   ||||||||  ||||||||||||||||||    
T  43930381 gtctcaatttggtcctataaatcttctgtcgtttactattttggtcctctctgttaatttttaaccttaaatgtctaaggtggac 43930465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 41516402 - 41516267
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||| ||||||||||||||| | || | |||||||  | | ||||| |||| ||  ||||||||   |||||||||||||||||| ||  ||||||    
T  41516402 aagtgtcttaatttggtcccataagtattcttccgtttagtaatgtggtcatttctgttagtttttaatcttaaatgtctaaggtggactaactttgtag 41516303  T
Q  101 gtggtctaccatagaccttactaagttttttaattt 136  Q
    ||| | |||||||||| ||| ||| ||||| |||||    
T  41516302 gtgttataccatagactttattaaatttttaaattt 41516267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 4857262 - 4857344
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtg 86  Q
    |||||| ||||||||||| || |||| ||||||||||  |||| ||||| |||||  ||||||||||  ||||||||||||||    
T  4857262 tgtctcgatttggtcccacaaatcttctgccgtttactgttttagtcctctccgttagtttttaacatcaaatgtctaaggtg 4857344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 13287052 - 13286970
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaag 83  Q
    |||||| ||||||||||||| ||  |||||||| |||||| ||||||||||| | |||  |||||||||  ||||||||||||    
T  13287052 aagtgtttcaatttggtcccttatgtcttatgctgtttactattttggtcctcttcgttagtttttaaccttaaatgtctaag 13286970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 35127871 - 35127917
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  35127871 tgtctcaattttgtcccataaatcttatgccgtttactattttggtc 35127917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 38406076 - 38406166
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggacca 91  Q
    |||||||||||  |||| |||||| |||| || |||||||  ||||||||||||||||   |||||||||  |||||||||||||| ||||    
T  38406076 aagtgtctcaaactggttccataaatcttctgacgtttactgttttggtcctttccgttaatttttaacatcaaatgtctaaggtgaacca 38406166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7347278 - 7347233
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccatttt 46  Q
    ||||||||||||||||||| |||| ||||||| |||||||||||||    
T  7347278 aagtgtctcaatttggtcctataaatcttatgtcgtttaccatttt 7347233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22060521 - 22060570
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    ||||||||||||||||| ||| || ||||||||||||||| |||||||||    
T  22060521 aagtgtctcaatttggttccacaagtcttatgccgtttactattttggtc 22060570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 22061849 - 22061808
Alignment:
Q  5 gtctcaatttggtcccataactcttatgccgtttaccatttt 46  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  22061849 gtctcaatttggtcccataaatcttatgccgtttactatttt 22061808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22744804 - 22744853
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    |||||| |||||||||||| |||| ||||||||||||||| |||||||||    
T  22744804 aagtgtttcaatttggtcctataaatcttatgccgtttactattttggtc 22744853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43006443 - 43006492
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    |||||||||||||||||||| ||| ||||||||||||| | |||||||||    
T  43006443 aagtgtctcaatttggtcccctaagtcttatgccgtttgctattttggtc 43006492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 43007707 - 43007662
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccatttt 46  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||||    
T  43007707 aagtgtctcaatttggtcccataagtcttatgtcgtttactatttt 43007662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 46457128 - 46457177
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    |||||||||||||||||||||||| |||| | || |||||||||||||||    
T  46457128 aagtgtctcaatttggtcccataaatcttcttccatttaccattttggtc 46457177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 9662220 - 9662141
Alignment:
Q  73 aaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    ||||||||| |||||||||| ||| ||| | ||| ||||||||||||| ||| ||||| ||||||||| ||||||| ||||    
T  9662220 aaatgtctatggtggaccaacattatagatagtccaccatagaccttattaa-tttttcaattttaaccatttgatctttt 9662141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 13446715 - 13446659
Alignment:
Q  2 agtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||||||||||||||||| |||| |||||||||  || |||||||| |||||    
T  13446715 agtgtctcaatttggtcccataaatcttctgccgtttattatattggtcctctccgt 13446659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 40930476 - 40930612
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| ||||||||||||||||| |||| ||  ||||||| |||| ||||| ||  |  ||||||||||  |||| ||||||||||||||  |||  ||    
T  40930476 aagtgtttcaatttggtcccataaatcttttgatgtttaccgttttagtcctctctattagtttttaacatcaaatatctaaggtggaccatgattcaag 40930575  T
Q  101 gtggtctaccatagaccttactaagttttttaatttt 137  Q
    ||| ||  ||||| |||||| ||| ||||| ||||||    
T  40930576 gtgatcccccatataccttattaaatttttaaatttt 40930612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 120
Target Start/End: Original strand, 17287192 - 17287251
Alignment:
Q  61 gtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagacctta 120  Q
    ||||||||| |||||| ||||  ||||| |||||||||| |||||||| |||||||||||    
T  17287192 gtttttaactctaaatatctacagtggatcaatattgtatgtggtctatcatagacctta 17287251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 18668865 - 18668939
Alignment:
Q  45 ttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagacctt 119  Q
    ||||||||||||||   ||||||||  ||||| ||||| || |||||||||| || |||||| ||||||||||||    
T  18668865 ttggtcctttccgttaatttttaaccataaatatctaaagtagaccaatattatatgtggtccaccatagacctt 18668939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 24495066 - 24494957
Alignment:
Q  44 tttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactat 143  Q
    ||||||||| |||||  ||||||||||  |||||||||| ||| ||||   ||  | |||||| ||||||  ||||| ||| ||||||||||||||| ||    
T  24495066 tttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaaagtggtccaccatatgccttattaatttttttaattttaaccat 24494967  T
Q  144 ttgatatttt 153  Q
    ||||| ||||    
T  24494966 ttgatttttt 24494957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 36702838 - 36702891
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccg 57  Q
    ||||||||||||||||||||| | || |||||||||| |||||| || ||||||    
T  36702838 tgtctcaatttggtcccataaatattctgccgtttactattttgatcatttccg 36702891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40926577 - 40926520
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||||||||||||| |||| | || | ||||||||| |||||||||| |||||    
T  40926577 aagtgtctcaatttggtcctataaattttctaccgtttaccgttttggtcctctccgt 40926520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43935243 - 43935288
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccatttt 46  Q
    |||||||||||||||||| ||||| |||| |||||||||| |||||    
T  43935243 aagtgtctcaatttggtctcataaatcttctgccgtttactatttt 43935288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 47163211 - 47163268
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||| || ||||||||||||||| |||| | |||||||| ||||||||||| |||||    
T  47163211 aagtgccttaatttggtcccataaatctttttccgtttactattttggtcctctccgt 47163268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 48754054 - 48754111
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||| ||||||| |||| |||| ||||||| ||||||||||||| ||||| |||||    
T  48754054 aagtgtttcaatttagtcctataaatcttatgtcgtttaccattttagtcctctccgt 48754111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 10257444 - 10257416
Alignment:
Q  1 aagtgtctcaatttggtcccataactctt 29  Q
    |||||||||||||||||||||||||||||    
T  10257444 aagtgtctcaatttggtcccataactctt 10257416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 34598856 - 34598903
Alignment:
Q  72 taaatgtctaaggtggaccaatattgtaggtggtctaccatagacctta 120  Q
    ||||||||||||||||||||| ||| ||||||||| |||||| ||||||    
T  34598856 taaatgtctaaggtggaccaagatt-taggtggtccaccataaacctta 34598903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 35128242 - 35128198
Alignment:
Q  8 tcaatttggtcccataactcttatgccgtttaccattttggtcct 52  Q
    |||||||||||| |||| ||||||| ||||||| |||||||||||    
T  35128242 tcaatttggtcctataaatcttatgtcgtttactattttggtcct 35128198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 3e-66; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 15856592 - 15856806
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| |||||||| ||| ||||||||| |||||||||||||||||||| ||| ||| |||||||||| |||||||||||||||||||||| ||| |||    
T  15856592 aagtgtatcaatttgatcc-ataactcttctgccgtttaccattttggtcattttcgtttgtttttaaccctaaatgtctaaggtggaccaacattatag 15856690  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatattttagttaaaaagaggatcgtcggattgtgcatgtctattctatcttata 200  Q
    |||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| || | ||||| ||||||  || |||||||||    
T  15856691 gtggtccaccatagaccttactaagttttttaattttaatcatttgatattttagttaaaaagaggattgttgaattgtacatgtcctttatatcttata 15856790  T
Q  201 gtgtaccatttattaa 216  Q
    ||||| ||||||||||    
T  15856791 gtgtatcatttattaa 15856806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 12830996 - 12830845
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    ||||||||||||||||||| ||||||||| ||| |||||| ||||||||||| |||||   |||||||| |||||| ||| ||||| ||||| ||| |||    
T  12830996 aagtgtctcaatttggtcctataactcttctgctgtttactattttggtcctctccgttaatttttaaccctaaatatcttaggtgaaccaacattatag 12830897  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||| ||||||||||||| | ||  |||||||||||||| |||||| ||||    
T  12830896 gtggtccaccatagaccttaat-agacttttaattttaactctttgatctttt 12830845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 12862976 - 12862825
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    ||||||||||||||||||| ||||||||| ||| |||||| ||||||||||| |||||   |||||||| |||||| ||| ||||| ||||| ||| |||    
T  12862976 aagtgtctcaatttggtcctataactcttctgctgtttactattttggtcctctccgttaatttttaaccctaaatatcttaggtgaaccaacattatag 12862877  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||| ||||||||||||| | ||  |||||||||||||| |||||| ||||    
T  12862876 gtggtccaccatagaccttaat-agacttttaattttaactctttgatctttt 12862825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 40058076 - 40058228
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| |||| |||||| |||||||||| |||||||||||||||||||| | |||||  ||||||||   ||||||||||||||| |||||  || ||     
T  40058076 aagtgtttcaaattggtctcataactcttctgccgtttaccattttggtcatctccgttagtttttaatcttaaatgtctaaggtgaaccaactttataa 40058175  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    || ||| ||||||||||||| ||| | ||||| |||||||| |||||| ||||    
T  40058176 gtagtccaccatagaccttattaaatcttttatttttaactgtttgatctttt 40058228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 19525346 - 19525227
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    ||||||||| |||||||| ||||| |||| |||||||||||||||||||||| ||||| ||||||||||  ||||| |||| |||| |||||  || ||     
T  19525346 aagtgtctccatttggtcacataagtcttctgccgtttaccattttggtcctctccgtttgtttttaaccttaaatttctatggtgaaccaactttatat 19525247  T
Q  101 gtggtctaccatagacctta 120  Q
    |||||| |||||||||||||    
T  19525246 gtggtccaccatagacctta 19525227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 223284 - 223436
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| | ||||||||||||||| ||||   |||||||| | | ||||||||||| |  ||||||||   ||||||||||||||| |||||  ||||||    
T  223284 aagtgtattaatttggtcccataagtcttcctccgtttactaatgtggtcctttccattagtttttaatcttaaatgtctaaggtgaaccaactttgtag 223383  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||||||||||||| ||| ||| ||||||||||| |||  |||||| ||||    
T  223384 gtggtctaccatagactttattaaattttttaatttaaaccgtttgatctttt 223436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 5383000 - 5383119
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||||||||| ||||  | ||||||| |||||| |||| |||||  |||||||||  ||||||||||||||| | |||  || |||    
T  5383000 aagtgtctcaatttggtcccataaatctttggtcgtttactattttgatcctctccgttagtttttaaccttaaatgtctaaggtgaatcaactttatag 5383099  T
Q  101 gtggtctaccatagacctta 120  Q
    |||||| |||||||||||||    
T  5383100 gtggtccaccatagacctta 5383119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 20539338 - 20539249
Alignment:
Q  64 tttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||||| |||| | ||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| |||  |||||| ||||    
T  20539338 tttaacaccaaatatataaggtggaccaatattgtaggtggtctatcatagaccttattaatttttttaatttaaaccgtttgatctttt 20539249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 22819564 - 22819424
Alignment:
Q  12 tttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctacca 111  Q
    |||||||||||||||||| |||||||||| ||||||||| | |||||  ||||||||| ||| || ||||||||| ||||| ||  ||||||||| || |    
T  22819564 tttggtcccataactcttctgccgtttactattttggtcatctccgttagtttttaaccctatatatctaaggtgaaccaacatgataggtggtccacta 22819465  T
Q  112 tagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||| |||| | || ||||||||||||||  |||||| ||||    
T  22819464 tagatcttaat-agatttttaattttaaccctttgatctttt 22819424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12936160 - 12936095
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgttttt 66  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||||| ||||||| |||||||    
T  12936160 aagtgtctcaatttggtccaataagtcttatgctgtttaccattttggtcatttccgtttgttttt 12936095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 2167572 - 2167421
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| ||||||||||||||||| |||| |||||||||  |||||||| || || ||  |||||||||  ||||||||||||||| |||||  || |||    
T  2167572 aagtgtttcaatttggtcccataaatcttctgccgtttattattttggt-ctctctgttagtttttaaccttaaatgtctaaggtgaaccaactttatag 2167474  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
     ||||| ||||||||||||| ||| | ||||| | |||||  |||||| ||||    
T  2167473 atggtccaccatagaccttattaaatcttttattattaaccgtttgatttttt 2167421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 32734190 - 32734341
Alignment:
Q  2 agtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtagg 101  Q
    ||||||| |||||||||||||||||||| || ||||||| ||||||||| |||||||  ||||||||   ||||| ||||||||| || |   |  |||     
T  32734190 agtgtcttaatttggtcccataactcttctgtcgtttactattttggtcatttccgttagtttttaatcttaaatatctaaggtgaacaaccttaataga 32734289  T
Q  102 tggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    | ||| ||||||||||||| ||| | ||||| |||||||  |||||||||||    
T  32734290 tagtccaccatagaccttattaaatcttttatttttaacagtttgatatttt 32734341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 42510172 - 42510291
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||| || |||||  |||||||||   ||||||||| |||| || || ||| | |    
T  42510172 aagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctccgttagtttttaacctcaaatgtctatggtgcactaacattattg 42510271  T
Q  101 gtggtctaccatagacctta 120  Q
     | ||| |||||||||||||    
T  42510272 atagtccaccatagacctta 42510291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22819607 - 22819557
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcc 51  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  22819607 aagtgtctcaatttggtcccataactcttctgccgtttactattttggtcc 22819557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12950318 - 12950253
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgttttt 66  Q
    ||||||||||||||||||| |||| |||||||  |||||||||||||||| ||||||| |||||||    
T  12950318 aagtgtctcaatttggtccaataagtcttatgatgtttaccattttggtcatttccgtttgttttt 12950253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12933809 - 12933877
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaac 69  Q
    ||||||||||||||| || ||||| |||| ||||||||||||||| |||||||||||| | ||||||||    
T  12933809 aagtgtctcaatttgatctcataagtcttctgccgtttaccatttcggtcctttccgtttatttttaac 12933877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12947970 - 12948038
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaac 69  Q
    ||||||||||||||| || ||||| ||||||| |||||||||||| |||||||||||| | ||||||||    
T  12947970 aagtgtctcaatttgatctcataagtcttatgtcgtttaccatttcggtcctttccgtttatttttaac 12948038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 10977155 - 10977229
Alignment:
Q  73 aaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgat 148  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||| || ||| ||||||||||||| | |||||||    
T  10977155 aaatgtctaagatggaccaacattgtatgtggtctaccatagaccatattaa-ttttttaattttatccatttgat 10977229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15613563 - 15613620
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||||||| |||| | |||||||| ||||||||||| |||||    
T  15613563 aagtgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgt 15613620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19827198 - 19827149
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||    
T  19827198 aagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtc 19827149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42980767 - 42980710
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||| ||||  |||| |||| |||||||||||||||||||||||    
T  42980767 aagtgtctcaatttggtctcatatatcttctgccatttaccattttggtcctttccgt 42980710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 38471354 - 38471462
Alignment:
Q  8 tcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtct 107  Q
    |||||||||| |||||| |||| | |||||||| |||||||| || || ||   ||||||||  ||||||| ||||||| |||||  || ||||||||||    
T  38471354 tcaatttggttccataaatcttcttccgtttactattttggttctctctgttaatttttaaccttaaatgtttaaggtgaaccaactttataggtggtct 38471453  T
Q  108 accatagac 116  Q
    |||||||||    
T  38471454 accatagac 38471462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5384404 - 5384347
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||||||| ||||   |||||||| ||||||||||| |||||    
T  5384404 aagtgtctcaatttggtcccataaatcttcgtccgtttactattttggtcctctccgt 5384347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15857676 - 15857627
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    |||||| |||||||| |||||||| ||||||| |||||||||||||||||    
T  15857676 aagtgtttcaatttgttcccataaatcttatgtcgtttaccattttggtc 15857627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18678034 - 18678083
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    |||||||||||||||||||||||| |||| || |||||||| ||||||||    
T  18678034 aagtgtctcaatttggtcccataaatcttctgtcgtttaccgttttggtc 18678083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24761779 - 24761722
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||||||||| || |||||||| | ||||||||||||||||| |||| |||||    
T  24761779 aagtgtctcaatttgatctcataactcgtctgccgtttaccattttgttcctctccgt 24761722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38473613 - 38473556
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||| ||||||||||||||| |||| || ||||||| ||||||||| |||||||    
T  38473613 aagtgtcttaatttggtcccataaatcttctgtcgtttactattttggtcatttccgt 38473556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42979506 - 42979563
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||| |||||||||||| |||| |||| |||||||||| ||||||||||| |||||    
T  42979506 aagtgtttcaatttggtccaataattcttctgccgtttactattttggtcctctccgt 42979563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 1273150 - 1273197
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcc 51  Q
    ||||||||||||||||||||| |||| ||| |||||| ||||||||||    
T  1273150 tgtctcaatttggtcccataaatcttctgcagtttacaattttggtcc 1273197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15615018 - 15614967
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcct 52  Q
    ||||||||||||||||| |||||| | || |||||||||| |||||||||||    
T  15615018 aagtgtctcaatttggttccataaattttctgccgtttactattttggtcct 15614967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 26404268 - 26404217
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcct 52  Q
    ||||||||||||||| |||||||| ||||||| | ||||| |||||||||||    
T  26404268 aagtgtctcaatttgatcccataaatcttatgtcatttactattttggtcct 26404217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 5977129 - 5977043
Alignment:
Q  3 gtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggac 89  Q
    |||||||||||||||||||||| | ||   |||||||| | | |||||||||| ||  ||||||||   ||||||||||||||||||    
T  5977129 gtgtctcaatttggtcccataagtattcatccgtttactaatgtggtcctttctgttagtttttaatcttaaatgtctaaggtggac 5977043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 32757949 - 32758039
Alignment:
Q  64 tttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagtttttt-aattttaactatttgatatttt 153  Q
    |||||| | ||||||||| |||||||||| || |||| | ||| ||||||||||||| ||| |||||| |||||||||  |||||| ||||    
T  32757949 tttaaccccaaatgtctatggtggaccaacatggtagatagtccaccatagaccttattaatttttttcaattttaaccctttgatctttt 32758039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10085903 - 10085846
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||| ||||||||||||||||| |||| |||  ||||| ||||||||||| |||||    
T  10085903 aagtgtttcaatttggtcccataaatcttctgctatttactattttggtcctctccgt 10085846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 32735528 - 32735488
Alignment:
Q  10 aatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    |||||||||||||||||||| |||||||||  |||||||||    
T  32735528 aatttggtcccataactcttctgccgtttattattttggtc 32735488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 13930733 - 13930614
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||  ||||||||||  ||| | |||  || ||     
T  13930733 aagtgtctcaatttggtcccataagtcttatgtcgtttaccattttggtcctttccgtttgtttttaaccttaaatgtctattgtgaaacaactttatat 13930634  T
Q  101 gtggtctaccatagacctta 120  Q
    ||||||||||||||||||||    
T  13930633 gtggtctaccatagacctta 13930614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 14071261 - 14071143
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||||||||||||| ||||||||||  ||||||||||  ||| | |||| || ||     
T  14071261 aagtgtctcaatttggtcccataagtcttctgtcgtttaccattttggtcctttccgtttgtttttaaccttaaatgtctattgtgaaacaat-ttatat 14071163  T
Q  101 gtggtctaccatagacctta 120  Q
    ||||||||||||||||||||    
T  14071162 gtggtctaccatagacctta 14071143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 21277052 - 21277188
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||| ||||||||||||||||||| |||| |||||||||| |||||| |||| ||| |  |||||| ||  ||||||||||||||| |||||  || |||    
T  21277052 aagtatctcaatttggtcccataaatcttctgccgtttactattttgatcctctccattagtttttgaccttaaatgtctaaggtgaaccaactttatag 21277151  T
Q  101 gtggtctaccatagaccttactaagttttttaatttt 137  Q
    |||||| ||||||||||||| ||| | ||||| ||||    
T  21277152 gtggtccaccatagaccttattaaatcttttattttt 21277188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 203
Target Start/End: Original strand, 51299383 - 51299543
Alignment:
Q  43 ttttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaacta 142  Q
    ||||||||| ||||||| ||||||||| |||||| | |||||| |||||| ||||||||||||| |||||||||||||  ||  |||||||||| |||      
T  51299383 ttttggtcccttccgtcagtttttaaccctaaatatttaaggtagaccaacattgtaggtggtccaccatagaccttataaaactttttaatttaaaccc 51299482  T
Q  143 tttgatattttagttaaaaagaggatcgtcggattgtgcatgtctattctatcttatagtg 203  Q
    |||||| ||||| |||||| ||| ||| | ||||  |||  ||||||| ||||||| ||||    
T  51299483 tttgatcttttatttaaaatgagaatcattggatcatgctggtctattgtatcttacagtg 51299543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 51726902 - 51726766
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    ||||||||||||||||| |||||| |||| || ||||||| ||||| |||||  ||||  |||||||||  ||||||||||||||| |||||  || |||    
T  51726902 aagtgtctcaatttggttccataaatcttctgtcgtttactattttagtcctcaccgttagtttttaaccttaaatgtctaaggtgaaccaactttatag 51726803  T
Q  101 gtggtctaccatagaccttactaagttttttaatttt 137  Q
    |||||| ||||||||||||| ||| | ||||| ||||    
T  51726802 gtggtccaccatagaccttattaaatcttttattttt 51726766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 14169680 - 14169796
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtg 103  Q
    ||||||||||||||||||||| |||| || ||||||| ||||||||| | || ||  |||||||||  ||||||||||||||| |||||  || ||||||    
T  14169680 tgtctcaatttggtcccataaatcttttgtcgtttactattttggtcttatctgttagtttttaaccttaaatgtctaaggtgaaccaactttataggtg 14169779  T
Q  104 gtctaccatagacctta 120  Q
    | | |||||||||||||    
T  14169780 gcccaccatagacctta 14169796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 13642615 - 13642480
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||| |||| |||||||||| || |||||||||  |||||||||  ||||||  |||||||||  |||||||||||||||||| ||  ||  ||    
T  13642615 aagtgtctcagtttgatcccataactattctgccgtttataattttggtctcttccgttagtttttaaccttaaatgtctaaggtggacgaactttacag 13642516  T
Q  101 gtggtctaccatagaccttactaagttttttaattt 136  Q
    ||||||||||||| || ||| |||  ||||||||||    
T  13642515 gtggtctaccataaactttattaaaatttttaattt 13642480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 19466263 - 19466129
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||||||||| |||| || ||||||| ||| |||| || |||||  |||||||||   ||||||||| ||||||| || ||| |||    
T  19466263 aagtgtctcaatttggtcccataaatcttctgtcgtttactattgtggttctctccgttagtttttaacctcaaatgtctatggtggactaacattatag 19466164  T
Q  101 gtggtctaccatagaccttactaagttttttaattt 136  Q
     | ||| ||||||||||||| ||| |||||||||||    
T  19466163 atagtccaccatagaccttattaa-ttttttaattt 19466129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 26056205 - 26056058
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||||||||| |||| || ||||||| ||||||||||| |||||  | ||||||||  ||| |||||| ||| ||||   ||  ||    
T  26056205 aagtgtctcaatttggtcccataaatcttttgtcgtttactattttggtcctctccgttagattttaacatcaaaagtctaaagtgaaccatatttaaag 26056106  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgat 148  Q
    |||||  ||||||| || || ||| ||||||||||||||| |||||||    
T  26056105 gtggttcaccataggccgtattaaattttttaattttaaccatttgat 26056058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 36509869 - 36510015
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| |||||||||| |||||| |||| |||||||||| |||||||| || |||||  |||||||||   ||||||||| ||||||| || ||| |||    
T  36509869 aagtgtttcaatttggttccataaatcttctgccgtttactattttggttctctccgttagtttttaacctcaaatgtctatggtggactaacattatag 36509968  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgat 148  Q
     |  || ||||||||||||| ||| ||||||||||||| | |||||||    
T  36509969 atattccaccatagaccttattaa-ttttttaattttagccatttgat 36510015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 2973066 - 2972958
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    ||||||||||||||||||| |||| |||||  |||||||| | | |||||||||| ||  |||||||||  ||||||||||||||| |||||  ||||||    
T  2973066 aagtgtctcaatttggtcctataagtcttaccccgtttactagtgtggtcctttctgttagtttttaactttaaatgtctaaggtgtaccaactttgtag 2972967  T
Q  101 gtggtctac 109  Q
     ||||||||    
T  2972966 atggtctac 2972958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3979371 - 3979314
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||| |||||    
T  3979371 aagtgtctcaatttggtcccataattcttctgccgtttactattttggtcctctccgt 3979314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 8092656 - 8092775
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| |||||||||| |||||| ||||   ||||||||   |||||||||||||||  || ||||||  ||||| ||||||||| |||||  || |||    
T  8092656 aagtgtatcaatttggttccataaatcttcctccgtttactgatttggtcctttccgttagtatttaaccttaaatatctaaggtgaaccaactttatag 8092755  T
Q  101 gtggtctaccatagacctta 120  Q
    |||||| |||||||||||||    
T  8092756 gtggtccaccatagacctta 8092775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 23082142 - 23082032
Alignment:
Q  43 ttttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaacta 142  Q
    ||||||||||||||||  ||||||||||| |||| ||||| ||| ||||   ||  |||||||| ||||| ||||||| ||| |||||||||||||||      
T  23082142 ttttggtcctttccgttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtccaccatggaccttaataaattttttaattttaacat 23082043  T
Q  143 tttgatatttt 153  Q
    |||||| ||||    
T  23082042 tttgatttttt 23082032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 47411506 - 47411460
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttg 47  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  47411506 aagtgtctcaatttggtcccataaatcttatgccgtttactattttg 47411460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 49141554 - 49141464
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggacca 91  Q
    |||||| |||| |||||||||||| | || |||||||||||||||| ||| | |||||  ||||||||||  |||||||||||||| ||||    
T  49141554 aagtgtttcaaattggtcccataatttttctgccgtttaccattttagtcatctccgttagtttttaacatcaaatgtctaaggtgaacca 49141464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13641315 - 13641364
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  13641315 aagtgtctcaatttggtcccataaatcttctgccgtttactattttggtc 13641364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25787222 - 25787165
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||| ||||| ||||||||| ||||| ||||||||||| |||||    
T  25787222 aagtgtctcaatttggtctcataaatcttatgccatttactattttggtcctctccgt 25787165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 47136745 - 47136688
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||  ||||| ||||||||||||||| ||||||||||| |||||    
T  47136745 aagtgtctcaatttggtgtcataaatcttatgccgtttactattttggtcctctccgt 47136688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 9633833 - 9633969
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||   |||| ||||   ||||||||  ||||| |||| |||||  ||||||||||  |||||||||||||| ||||   ||  ||    
T  9633833 aagtgtctcaatttggttatataaatcttcaaccgtttacagttttgatcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaag 9633932  T
Q  101 gtggtctaccatagaccttactaagttttttaatttt 137  Q
    |||||| ||||||||||||| ||| ||||| ||||||    
T  9633933 gtggtccaccatagaccttattaaatttttaaatttt 9633969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25786026 - 25786077
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcct 52  Q
    |||||||||||||||||||||||| ||||||| ||||||  |||||||||||    
T  25786026 aagtgtctcaatttggtcccataaatcttatgtcgtttattattttggtcct 25786077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 42248363 - 42248312
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcct 52  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||| |||||    
T  42248363 aagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcct 42248312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 22766836 - 22766726
Alignment:
Q  43 ttttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaacta 142  Q
    ||||||||||||||||  ||||||||||| |||| ||||| ||| ||||   ||  |||||||| ||||| ||||||  ||| |||||||||||||||      
T  22766836 ttttggtcctttccgttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtccaccatggaccttcataaattttttaattttaacct 22766737  T
Q  143 tttgatatttt 153  Q
    |||||| ||||    
T  22766736 tttgatttttt 22766726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 29001136 - 29001062
Alignment:
Q  45 ttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagacctt 119  Q
    ||||||||||||||   ||||||||  ||||| ||||| ||||||||||||| || |||||| ||||||||||||    
T  29001136 ttggtcctttccgttaatttttaaccataaatatctaaagtggaccaatattatatgtggtccaccatagacctt 29001062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 42246011 - 42246100
Alignment:
Q  63 ttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||||  |||||||| |||||| | ||| |||| ||||||| ||||||||||| || ||| |||||||||||||||| || ||||||||    
T  42246011 ttttaaccataaatgtccaaggtgtaacaacattgcaggtggtttaccatagacc-tattaaattttttaattttaactgttcgatatttt 42246100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3978102 - 3978159
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||||||||| |||||||| |||| || ||||||| ||||||||||| |||||    
T  3978102 aagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctctccgt 3978159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 11897768 - 11897813
Alignment:
Q  73 aaatgtctaaggtggaccaatattgtaggtggtctaccatagacct 118  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||    
T  11897768 aaatgtctaaggtgaaccaatattataggtggtctaccataaacct 11897813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36511389 - 36511340
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    |||||||||||||||||||||||| |||| || ||||||| |||||||||    
T  36511389 aagtgtctcaatttggtcccataaatcttctgtcgtttactattttggtc 36511340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 40811256 - 40811321
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaac 69  Q
    |||||||||||| ||||||||||||| |||||||||  ||||||||| | |||||  |||||||||    
T  40811256 tgtctcaatttgatcccataactcttttgccgtttattattttggtcatctccgttagtttttaac 40811321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 47411042 - 47411091
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    |||||||||||||||||| ||||| ||||||| ||||||| |||||||||    
T  47411042 aagtgtctcaatttggtctcataaatcttatgtcgtttactattttggtc 47411091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 34258695 - 34258628
Alignment:
Q  73 aaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaac 140  Q
    |||| ||||||||||||||| |||||| | |||| |||||| |||||| ||| || ||||||||||||    
T  34258695 aaatatctaaggtggaccaacattgtatgcggtccaccataaaccttattaatttatttaattttaac 34258628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 160
Target Start/End: Original strand, 38280939 - 38281049
Alignment:
Q  49 tcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgat 148  Q
    |||| |||||| |||||||||  ||||||||||||||| |||||   |||| |||||||| | ||||| ||| ||| |||||| ||||||||  ||||||    
T  38280939 tcctctccgtcagtttttaactttaaatgtctaaggtgaaccaactctgtaagtggtcta-cgtagactttattaattttttttattttaaccgtttgat 38281037  T
Q  149 attttagttaaa 160  Q
     ||||| |||||    
T  38281038 cttttatttaaa 38281049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 14390319 - 14390373
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||| |||||| |||| |  ||||||||||||||||||| |||||    
T  14390319 tgtctcaatttggttccataaatcttctttcgtttaccattttggtcctctccgt 14390373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 51300240 - 51300166
Alignment:
Q  76 tgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatat 150  Q
    |||| |||||||||||| |||  | |||||| ||||||||||||| ||| ||| | ||||||||| |||||||||    
T  51300240 tgtcaaaggtggaccaacattaaaagtggtccaccatagaccttattaattttatgaattttaaccatttgatat 51300166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13929353 - 13929410
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||| ||| |||| | ||||||| ||| |||||||| |||||    
T  13929353 aagtgtctcaatttggtcccgtaaatcttcttccgtttatcatcttggtcctgtccgt 13929410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16217498 - 16217547
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    ||||||||||||||||||| |||| ||||||| | ||||| |||||||||    
T  16217498 aagtgtctcaatttggtcctataaatcttatgtcatttactattttggtc 16217547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16218536 - 16218487
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    |||| ||||||||||||||||||| ||||||| ||||||  |||||||||    
T  16218536 aagtatctcaatttggtcccataaatcttatgtcgtttaatattttggtc 16218487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 20953346 - 20953403
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||||||||||||| |||| ||||| | | ||||||||||| ||||| |||||    
T  20953346 aagtgtctcaatttggtcctataaatcttaagtcatttaccattttagtcctctccgt 20953403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 40109419 - 40109504
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtg 86  Q
    |||||| ||||||||||||||||| ||||   |||||||| | | |||||||||| ||  ||||||||   |||||||||||||||    
T  40109419 aagtgtgtcaatttggtcccataaatcttcatccgtttactaatgtggtcctttctgttagtttttaatcttaaatgtctaaggtg 40109504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 16757507 - 16757427
Alignment:
Q  73 aaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    ||||||||||| |||||||| ||| || |||||| | ||||||||||| ||| ||  ||| ||| |||| |||||||||||    
T  16757507 aaatgtctaagatggaccaacattataagtggtccatcatagaccttattaaattgcttagtttaaactgtttgatatttt 16757427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22167837 - 22167885
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggt 49  Q
    |||||| ||||||||||||||||| |||| |||||||||  ||||||||    
T  22167837 aagtgtttcaatttggtcccataaatcttctgccgtttattattttggt 22167885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 52743034 - 52742882
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    ||||||||||| |||||||| ||  | ||||| |||||||  || ||||||| |||||  ||||||||||  |||||| ||||||| ||||   ||  ||    
T  52743034 aagtgtctcaaattggtcccttaggttttatgtcgtttactgttatggtcctctccgttagtttttaacatcaaatgtttaaggtgaaccatgtttaaag 52742935  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||  ||||||||||| | ||  ||||| |||||||||  |||||| ||||    
T  52742934 gtggtacaccatagacctaattacatttttaaattttaaccttttgatttttt 52742882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 153
Target Start/End: Original strand, 47131 - 47280
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtg 103  Q
    ||||||||||||||||||||| |||| | |||||||| ||||||||||| |||||   ||||||||  ||||||||||||||| |  ||  |||||||||    
T  47131 tgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgttaatttttaactttaaatgtctaaggtgaattaactttgtaggtg 47230  T
Q  104 gtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||||||| || ||| ||| |||||||||||||||  |||||| ||||    
T  47231 gtctaccataaactttattaaattttttaattttaaccgtttgatctttt 47280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 153
Target Start/End: Complemental strand, 27440230 - 27440081
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtg 103  Q
    ||||||||||||||||||||| |||| | |||||||| ||||||||||| |||||   ||||||||  ||||||||||||||| |  ||  |||||||||    
T  27440230 tgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgttaatttttaactttaaatgtctaaggtgaattaactttgtaggtg 27440131  T
Q  104 gtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||||||| || ||| ||| |||||||||||||||  |||||| ||||    
T  27440130 gtctaccataaactttattaaattttttaattttaaccgtttgatctttt 27440081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 293698 - 293579
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| ||||||||||| ||||| |||| || ||||||||||||||||||| ||||| | ||||||||  ||||||||||||||| |||||  || |||    
T  293698 aagtgtttcaatttggtctcataagtcttctgtcgtttaccattttggtcctctccgtttatttttaaccttaaatgtctaaggtgaaccaactttatag 293599  T
Q  101 gtggtctaccatagacctta 120  Q
    |||||| |||||||||||||    
T  293598 gtggtccaccatagacctta 293579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31740330 - 31740265
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgttttt 66  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||    
T  31740330 aagtgtctcaatttggtcccataaatcttatgccgtttaccattttggtcctatccgtttgttttt 31740265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 14328832 - 14328713
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||| ||||||||| ||||| |||| || ||||||| ||||||||||| |||||   ||||||||  ||||||||||||||| |||||  || |||    
T  14328832 aagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctccgttactttttaaccttaaatgtctaaggtgaaccaactttatag 14328733  T
Q  101 gtggtctaccatagacctta 120  Q
    |||||| |||||||||||||    
T  14328732 gtggtccaccatagacctta 14328713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 14421842 - 14421723
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||| ||||||||| ||||| |||| || ||||||| ||||||||||| |||||   ||||||||  ||||||||||||||| |||||  || |||    
T  14421842 aagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctccgttactttttaaccttaaatgtctaaggtgaaccaactttatag 14421743  T
Q  101 gtggtctaccatagacctta 120  Q
    |||||| |||||||||||||    
T  14421742 gtggtccaccatagacctta 14421723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 22298662 - 22298797
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||| |||| |||||||||| || |||||||||  |||||||||  ||||||  |||||||||  |||||||||||||||||| ||  ||  ||    
T  22298662 aagtgtctcagtttgatcccataactattctgccgtttataattttggtctcttccgttagtttttaaccttaaatgtctaaggtggacgaactttacag 22298761  T
Q  101 gtggtctaccatagaccttactaagttttttaattt 136  Q
    ||||||||||||| || ||| |||  ||||||||||    
T  22298762 gtggtctaccataaactttattaaaatttttaattt 22298797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 31738421 - 31738512
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaa 92  Q
    |||||| ||||||||||||||||| |||| ||| |||||||||||||||||| |||||  |||||||||  ||||||||||| ||| |||||    
T  31738421 aagtgtttcaatttggtcccataagtcttctgcggtttaccattttggtcctctccgttagtttttaaccttaaatgtctaatgtgaaccaa 31738512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 153
Target Start/End: Original strand, 12773173 - 12773280
Alignment:
Q  46 tggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactattt 145  Q
    |||||||||||||| |||||||||  ||||||||||||||||| ||| |||||||   ||| ||||||||||||||| | ||||| ||||| ||| |||     
T  12773173 tggtcctttccgtcagtttttaaccttaaatgtctaaggtggatcaacattgtagactgtccaccatagaccttacttattttttaaatttgaaccatta 12773272  T
Q  146 gatatttt 153  Q
    ||| ||||    
T  12773273 gatctttt 12773280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8412374 - 8412317
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||| |||||    
T  8412374 aagtgtctcaatttggtcccataaatcttgtgccgtttactattttggtcctctccgt 8412317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 9927664 - 9927801
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    ||||||||||||||||||||||||  |||    ||||||| ||||||||| | |||||   ||||||||  |||||||||||| || |||||  ||||||    
T  9927664 aagtgtctcaatttggtcccataaa-cttcaatcgtttactattttggtcatctccgttaatttttaaccttaaatgtctaagatgaaccaactttgtag 9927762  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaac 140  Q
    ||||||||||| |||| ||| ||  |||||||||||||||    
T  9927763 gtggtctacca-agactttattacattttttaattttaac 9927801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8411144 - 8411201
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||||||||||||  |||| ||||||||||||||| ||||||||||| |||||    
T  8411144 aagtgtctcaatttggtcttataaatcttatgccgtttactattttggtcctctccgt 8411201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22299961 - 22299912
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  22299961 aagtgtctcaatttggtcccataaatcttctgccgtttactattttggtc 22299912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 24757027 - 24757095
Alignment:
Q  85 tggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||| ||| ||||||||||||||||| ||||||||| ||| | ||||||||||||| ||||||| ||||    
T  24757027 tggagcaacattgtaggtggtctaccttagaccttattaattcttttaattttaacaatttgatctttt 24757095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 134
Target Start/End: Original strand, 136750 - 136821
Alignment:
Q  63 ttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaat 134  Q
    ||||||||  |||||||||||||||||| | || ||| |||||||||||||||||||| ||| || ||||||    
T  136750 ttttaacatcaaatgtctaaggtggaccgacatggtaagtggtctaccatagaccttattaatttatttaat 136821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 5311337 - 5311388
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcct 52  Q
    ||||||||||||||||||| |||| ||||||| ||||||| |||||||||||    
T  5311337 aagtgtctcaatttggtcctataaatcttatgtcgtttactattttggtcct 5311388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 16268670 - 16268736
Alignment:
Q  72 taaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaatttta 138  Q
    ||||||||||| ||| |||||  ||||| |||||||||||||||| ||| ||| |||||||||||||    
T  16268670 taaatgtctaacgtgaaccaactttgtatgtggtctaccatagactttattaaattttttaatttta 16268736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 18139545 - 18139406
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    ||||||||||| |||||||| ||  |||| |||||||||   |||||||||| ||| |  ||||||||||  |||||||||||||| ||||   ||  ||    
T  18139545 aagtgtctcaaattggtcccttatatcttctgccgtttattgttttggtcctctccattagtttttaacatcaaatgtctaaggtgaaccatgtttaaag 18139446  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaac 140  Q
     || || ||||||||| ||| ||| ||||| |||||||||    
T  18139445 atgatccaccatagacattattaaatttttaaattttaac 18139406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 14326215 - 14326268
Alignment:
Q  5 gtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||| |||| |  ||||||| ||| |||||||||||||    
T  14326215 gtctcaatttggtcccataattcttctatcgtttactattgtggtcctttccgt 14326268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 14419225 - 14419278
Alignment:
Q  5 gtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||| |||| |  ||||||| ||| |||||||||||||    
T  14419225 gtctcaatttggtcccataattcttctatcgtttactattgtggtcctttccgt 14419278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33807747 - 33807804
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||||||||| | |||||| | || ||||||||||| |||||||||| |||||    
T  33807747 aagtgtctcaatttgatgccataaattttctgccgtttaccgttttggtcctctccgt 33807804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 7313019 - 7312951
Alignment:
Q  80 taaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgat 148  Q
    ||||||||||||| ||| || |||||| ||||||| | ||| ||| ||||||||||| |||| ||||||    
T  7313019 taaggtggaccaacattatatgtggtccaccataggctttaataatttttttaatttaaactgtttgat 7312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 30231601 - 30231657
Alignment:
Q  63 ttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagacctt 119  Q
    ||||||||  |||||||||||||| ||||| || ||| |||||| ||||||||||||    
T  30231601 ttttaacatcaaatgtctaaggtgaaccaacatggtaagtggtccaccatagacctt 30231657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34084192 - 34084148
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattt 45  Q
    |||||||||||||||||| ||||| |||| || ||||||||||||    
T  34084192 aagtgtctcaatttggtctcataaatcttctgtcgtttaccattt 34084148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 28109927 - 28109777
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||| ||||||||||||||||||||| || ||  |||||||||||||||||| |||||   ||||||||  ||||||||||||||| |||||  ||||||    
T  28109927 aagtatctcaatttggtcccataacttttctgtagtttaccattttggtcctctccgttattttttaaccttaaatgtctaaggtgaaccaactttgtag 28109828  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatt 151  Q
    |||||| ||||| || ||||  || |  ||||||||||||  |||||||||    
T  28109827 gtggtccaccatggatcttataaattcatttaattttaaccctttgatatt 28109777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 10367297 - 10367416
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||| ||| ||||| |||| ||||||||||| |||| ||| | ||||| ||||||||||  ||||||||||||||| |||||  || |||    
T  10367297 aagtgtctcaatttagtctcataagtcttctgccgtttacctttttagtcgtctccgtttgtttttaaccttaaatgtctaaggtgaaccaactttatag 10367396  T
Q  101 gtggtctaccatagacctta 120  Q
    |||||| || ||||||||||    
T  10367397 gtggtccacaatagacctta 10367416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 12959763 - 12959644
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||| |||| |||| |||| ||||||||||| ||||| |||| ||||| ||| ||||||  ||||||||||||||| |||||  || |||    
T  12959763 aagtgtctcaatttagtccgataaatcttctgccgtttacctttttgatcctctccgtttgtctttaaccttaaatgtctaaggtgaaccaactttatag 12959664  T
Q  101 gtggtctaccatagacctta 120  Q
    |||||| || ||||||||||    
T  12959663 gtggtccacaatagacctta 12959644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 7037024 - 7037109
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtg 86  Q
    |||||| ||||||||||||||||| |||| |||||||||||||||||||| ||||||| | ||||||||  ||||| |||||||||    
T  7037024 aagtgtttcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgtttatttttaaccttaaatatctaaggtg 7037109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 15850710 - 15850566
Alignment:
Q  8 tcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtct 107  Q
    ||||||||||| |||||||||| ||| |||  | ||||||||||  | |||  ||||||||| |||||||||||||||| ||||| ||| |||||||||     
T  15850710 tcaatttggtctcataactcttctgctgttacctattttggtccacttcgttagtttttaaccctaaatgtctaaggtgaaccaacattataggtggtcc 15850611  T
Q  108 accatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||||| |||| | || ||||||||||||||  |||||| ||||    
T  15850610 accatagatcttaat-agatttttaattttaaccctttgatctttt 15850566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23177732 - 23177801
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaaca 70  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||  ||||||||||    
T  23177732 aagtgtctcaatttggtcccataaatcttctgccgtttaccattttggtcctctccgttagtttttaaca 23177801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23588989 - 23589058
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaaca 70  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||  ||||||||||    
T  23588989 aagtgtctcaatttggtcccataaatcttctgccgtttaccattttggtcctctccgttagtttttaaca 23589058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 14509267 - 14509419
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| | |||| |||||||||| |||| || ||||||| ||||||||||| |||||   ||||||||  ||||||||||||||  |||||  || |||    
T  14509267 aagtgttttaattcggtcccataaatcttctgtcgtttactattttggtcctctccgttaatttttaaccttaaatgtctaaggtaaaccaactttatag 14509366  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||| ||||||||||||| |||   ||||| |||||||  |||||||||||    
T  14509367 gtggtccaccatagaccttattaaaccttttatttttaaccgtttgatatttt 14509419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 35799570 - 35799722
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||| ||||||| || | |||||||||  ||||||||| |||||  | |||||||  ||||||||||||||| | |||  || ||     
T  35799570 aagtgtctcaatttggtctcataacttttcttccgtttacctctttggtcctctccgttagcttttaaccttaaatgtctaaggtgaatcaactttataa 35799669  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||||||||||||| ||| ||| | || ||||||||||  |||||| ||||    
T  35799670 gtggtctaccatagactttattaaatgttataattttaaccgtttgatctttt 35799722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 37869098 - 37868979
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||| ||| ||||| |||| || |||||||| |||||||| | ||||| ||||||||||  |||||||||||||||  ||||  || |||    
T  37869098 aagtgtctcaatttagtctcataagtcttctgtcgtttacctttttggtcttctccgtttgtttttaaccttaaatgtctaaggtgagccaactttatag 37868999  T
Q  101 gtggtctaccatagacctta 120  Q
    |||||| || ||||||||||    
T  37868998 gtggtccacaatagacctta 37868979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 32614445 - 32614528
Alignment:
Q  3 gtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtg 86  Q
    |||| ||||||| || |||||||||||||| ||||||||||||| ||||| ||||| ||||||||||  || ||||||||||||    
T  32614445 gtgtttcaatttagttccataactcttatgtcgtttaccattttagtcctctccgtttgtttttaaccttatatgtctaaggtg 32614528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 25570928 - 25570790
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| |||||||| | |||||| ||||   || ||||| ||||| |||||||||||  ||||||||   ||||||||||||||| |||||  || |||    
T  25570928 aagtgtttcaatttgattccataagtcttcctccatttactattttagtcctttccgttagtttttaaacttaaatgtctaaggtgaaccaactttatag 25570829  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaa 139  Q
    |||||| ||||||||||||| ||| | ||||| ||||||    
T  25570828 gtggtccaccatagaccttattaaatattttatttttaa 25570790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 7983753 - 7983618
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||| |||||||||||| |||| |||| | ||||||||  |||| ||||||| ||||  |||||||||  |||||||||||||| ||||   ||  ||    
T  7983753 aagtgtgtcaatttggtcctataagtcttctaccgtttactgttttagtccttttcgtcaatttttaacatcaaatgtctaaggtgaaccatgtttaaag 7983654  T
Q  101 gtggtctaccatagaccttactaagttttttaattt 136  Q
    |||||| |||||||| |||| ||| ||||| |||||    
T  7983653 gtggtccaccatagatcttattaaatttttaaattt 7983618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 12852944 - 12853091
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||||||||||||| |||| |  ||||||| ||||||||| | |||||  | ||||||||  |||  ||||||||| ||||   ||  ||    
T  12852944 aagtgtctcaatttggtcccataaatcttctatcgtttactattttggtcatctccgttagattttaacatcaaaaatctaaggtgaaccatatttaaag 12853043  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgat 148  Q
    |||||  |||||||||| || ||| ||||| ||||||||| |||||||    
T  12853044 gtggttcaccatagaccgtattaaatttttgaattttaaccatttgat 12853091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 4829526 - 4829640
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtg 103  Q
    |||||||||||| || ||||| ||||||| ||||||| ||||||||||| || ||  || ||||||  ||||| ||||||||  |||||  || ||||||    
T  4829526 tgtctcaatttgatctcataaatcttatgtcgtttactattttggtcctctctgttagtgtttaaccttaaatatctaaggtaaaccaactttataggtg 4829625  T
Q  104 gtctaccatagacct 118  Q
    ||| |||||||||||    
T  4829626 gtccaccatagacct 4829640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2581861 - 2581918
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||||||||| ||||| ||||||||| || |||||||| |||||    
T  2581861 aagtgtctcaatttggtcccataaatcttacgccgtttactatcttggtcctctccgt 2581918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 9472747 - 9472831
Alignment:
Q  63 ttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgat 148  Q
    ||||||| | |||| |||||| |||||||| |||||| ||||||||||||||||| || ||| ||||||||||||| | |||||||    
T  9472747 ttttaactccaaatatctaagatggaccaacattgtatgtggtctaccatagaccatattaa-ttttttaattttatccatttgat 9472831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 197
Target Start/End: Complemental strand, 2277461 - 2277327
Alignment:
Q  64 tttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgatattttagttaa-aaa 162  Q
    |||||| | ||||||||| |||||||||| || |||| | ||| ||||||||||||| ||| ||||| |||||||||  |||||| ||||  |||| |||    
T  2277461 tttaaccccaaatgtctatggtggaccaacatggtagatagtccaccatagaccttattaattttttcaattttaaccctttgatcttttttttaagaaa 2277362  T
Q  163 gaggatcgtcggattgtgcatgtctattctatctt 197  Q
     | |||||| ||||  |||| ||||||| ||||||    
T  2277361 aatgatcgtaggatcatgcaagtctattgtatctt 2277327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 7490250 - 7490168
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtg 86  Q
    ||||||||||||||||||||| |||| |   |||||| ||||||||| | |||||  |||||||||  |||||||||||||||    
T  7490250 tgtctcaatttggtcccataaatcttttattgtttactattttggtcttatccgttagtttttaaccttaaatgtctaaggtg 7490168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 11575503 - 11575425
Alignment:
Q  42 attttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagacctta 120  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||| | |||  || |||||| || |||||| ||||||    
T  11575503 attttggtcctttccgtttgtttttaaccttaaatgtctaaggtgaatcaactttataggtgatccaccataaacctta 11575425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1625034 - 1624985
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    ||||||||||||||||||| |||| ||||||||| ||||| |||||||||    
T  1625034 aagtgtctcaatttggtcctataaatcttatgccatttactattttggtc 1624985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12958474 - 12958539
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgttttt 66  Q
    |||||||||||||||||||||||| | || | || |||| |||||||||| ||||||| |||||||    
T  12958474 aagtgtctcaatttggtcccataaattttcttccatttatcattttggtcatttccgtttgttttt 12958539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14510567 - 14510522
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccatttt 46  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||||    
T  14510567 aagtgtctcaatttggtcctataactcttctgccgtttactatttt 14510522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35801103 - 35801046
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||| ||||||||||||| |||||||| |||| ||||||| ||||||||| |||||    
T  35801103 aagtgtttcaatttggtcccctaactcttctgccatttaccactttggtcctctccgt 35801046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 42246649 - 42246702
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtccttt 54  Q
    |||||| |||||||| ||||||||||||| | |||||||| |||||||||||||    
T  42246649 aagtgtttcaatttgatcccataactcttttaccgtttactattttggtccttt 42246702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 26204744 - 26204676
Alignment:
Q  63 ttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagtttttt 131  Q
    |||||||| ||||||||||| ||||||||||||  ||||||||| |||| |||| | | ||||||||||    
T  26204744 ttttaacattaaatgtctaaagtggaccaatatgataggtggtccaccaaagacttcattaagtttttt 26204676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 34467667 - 34467719
Alignment:
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    |||||| |||||| |||||| ||||||||||||||| |||| |||||||||||    
T  34467667 gtggtccaccataaaccttattaagttttttaatttaaactgtttgatatttt 34467719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 147
Target Start/End: Original strand, 12095408 - 12095483
Alignment:
Q  72 taaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttga 147  Q
    ||||||| ||| ||||| |||||||||| || ||| | | ||||||||| ||| |||||||||||||||| |||||    
T  12095408 taaatgtgtaaagtggatcaatattgtacgttgtccatcgtagaccttattaaattttttaattttaactgtttga 12095483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6706984 - 6707034
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcc 51  Q
    ||||||||||||||||| |||||| |||| | |||||||| ||||||||||    
T  6706984 aagtgtctcaatttggttccataaatcttcttccgtttactattttggtcc 6707034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 153
Target Start/End: Original strand, 14714592 - 14714702
Alignment:
Q  43 ttttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaacta 142  Q
    |||||||||| |||||  ||||||||||  |||||||||||||| ||||   ||  |||||||| ||||||  ||||| ||| ||||||||||  ||| |    
T  14714592 ttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatacgccttattaatttttttaattgcaacca 14714691  T
Q  143 tttgatatttt 153  Q
    |||||| ||||    
T  14714692 tttgatttttt 14714702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 21664935 - 21664981
Alignment:
Q  73 aaatgtctaaggtggaccaatattgtaggtggtctaccatagacctt 119  Q
    ||||||||| |||||||||| ||||||||||||| | ||||||||||    
T  21664935 aaatgtctatggtggaccaacattgtaggtggtcaatcatagacctt 21664981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 34147260 - 34147350
Alignment:
Q  64 tttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagtttttt-aattttaactatttgatatttt 153  Q
    |||||| | ||||||||| |||||||||| || |||| | ||| ||||||||||||| ||| |||||| |||||||||  |||||| ||||    
T  34147260 tttaaccccaaatgtctatggtggaccaacatggtagatagtccaccatagaccttattaatttttttcaattttaaccctttgatctttt 34147350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 42027254 - 42027308
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||||||||||||||| | || ||| |||||| | |||||||||||||||    
T  42027254 tgtctcaatttggtcccataaattttctgctgtttactactttggtcctttccgt 42027308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10368443 - 10368378
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgttttt 66  Q
    ||||||||||||||| |||||||| | || | ||||||| |||||||||| | ||||| |||||||    
T  10368443 aagtgtctcaatttgatcccataaattttcttccgtttatcattttggtcatgtccgtttgttttt 10368378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 153
Target Start/End: Original strand, 26205114 - 26205223
Alignment:
Q  44 tttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactat 143  Q
    ||||||||| |||||  ||||||||||  |||||||||||||| ||||   ||  | |||||| ||||||  ||||| ||| ||||| ||||||||| ||    
T  26205114 tttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatacttaaaagtggtccaccatatgccttattaattttttaaattttaaccat 26205213  T
Q  144 ttgatatttt 153  Q
    ||||| ||||    
T  26205214 ttgatttttt 26205223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 208
Target Start/End: Complemental strand, 34513501 - 34513401
Alignment:
Q  108 accatagaccttactaagttttttaattttaactatttgatattttagttaaaaagaggatcgtcggattgtgcatgtctattctatcttatagtgtacc 207  Q
    ||||||||||||| ||| ||||||||||| |||  |||||| | ||  ||||||||| |||| | ||||| ||| |||||||| || ||||  |||||||    
T  34513501 accatagaccttattaatttttttaatttaaaccgtttgatctgttttttaaaaagatgatcattggattatgcgtgtctattgtaacttacggtgtacc 34513402  T
Q  208 a 208  Q
    |    
T  34513401 a 34513401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 686 - 534
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||||| | |||||  ||||||||||  |||  ||||||||| ||||   ||  ||    
T  686 aagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaag 587  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
     ||||  ||| |||| |||| ||| |||| |||||||||| ||||||| ||||    
T  586 atggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 588 - 740
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||||| | |||||  ||||||||||  |||  ||||||||| ||||   ||  ||    
T  588 aagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaag 687  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
     ||||  ||| |||| |||| ||| |||| |||||||||| ||||||| ||||    
T  688 atggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 9536 - 9384
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtag 100  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||||| | |||||  ||||||||||  |||  ||||||||| ||||   ||  ||    
T  9536 aagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaag 9437  T
Q  101 gtggtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
     ||||  ||| |||| |||| ||| |||| |||||||||| ||||||| ||||    
T  9436 atggttcaccgtagatcttattaaattttctaattttaaccatttgatttttt 9384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 16019 - 16155
Alignment:
Q  17 tcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagac 116  Q
    ||||||||  |||||||||||||| ||||| ||||| |||||  |||||||||  |||||||||||| || |||||  || ||| ||||| |||||||||    
T  16019 tcccataaaccttatgccgtttactattttagtcctctccgttagtttttaaccttaaatgtctaagatgaaccaactttatagatggtccaccatagac 16118  T
Q  117 cttactaagttttttaattttaactatttgatatttt 153  Q
    |||| |||   ||||| |||||||  |||||||||||    
T  16119 cttattaaaccttttatttttaaccgtttgatatttt 16155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 207814 - 207704
Alignment:
Q  43 ttttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaacta 142  Q
    |||||||||| |||||  ||||||||||  |||||||| ||||| ||||   ||  |||||||| ||||||  ||||||||| ||||||||||||||| |    
T  207814 ttttggtcctctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccaccatatgccttactaaattttttaattttaacca 207715  T
Q  143 tttgatatttt 153  Q
    |||||| ||||    
T  207714 tttgatttttt 207704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 573 - 516
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||||||||||||||  ||||| ||||||||||||||| ||||||||||| |||||    
T  573 aagtgtctcaatttggtgtcataaatcttatgccgtttactattttggtcctctccgt 516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2323 - 2266
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    |||||| |||||||||||||||||||||| | | |||||| |||||||||||||||||    
T  2323 aagtgtttcaatttggtcccataactcttctactgtttactattttggtcctttccgt 2266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 22104 - 22188
Alignment:
Q  64 tttaacactaaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaattttaactatttgat 148  Q
    |||||| | ||||| ||| |||||||||| ||||||||||||| |||||||||| || ||| || |||||||| ||| |||||||    
T  22104 tttaacccaaaatgcctatggtggaccaacattgtaggtggtccaccatagaccctattaatttctttaatttaaaccatttgat 22188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4276 - 4219
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgt 58  Q
    ||||||||||||||| || |||||||| | ||||||||||||||||| |||| |||||    
T  4276 aagtgtctcaatttgatctcataactcgtctgccgtttaccattttgttcctctccgt 4219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 40977 - 41118
Alignment:
Q  12 tttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtggtctacca 111  Q
    ||||||| ||||| |||| || |||||||  |||| || || || ||  ||||||||||  |||||||||||||| ||||   ||  |||||||| ||||    
T  40977 tttggtctcataagtcttctgtcgtttactgttttagttctctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccacca 41076  T
Q  112 tagaccttactaagttttttaattttaactatttgatatttt 153  Q
    ||  ||||||||| |||||| |||||||| ||||||| ||||    
T  41077 tatgccttactaaatttttttattttaaccatttgatttttt 41118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 46667 - 46732
Alignment:
Q  73 aaatgtctaaggtggaccaatattgtaggtggtctaccatagaccttactaagttttttaatttta 138  Q
    |||||||| ||||||| ||||||||||||||||| ||  ||||||||| ||| || ||||||||||    
T  46667 aaatgtcttaggtggatcaatattgtaggtggtccactgtagaccttattaatttatttaatttta 46732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 153
Target Start/End: Complemental strand, 13259 - 13110
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgtttttaacactaaatgtctaaggtggaccaatattgtaggtg 103  Q
    ||||||||||| |||||||||||||| | |||||  |  |||||||||| ||| |  | ||||||||  |||||||||||||| ||||   ||  || ||    
T  13259 tgtctcaatttcgtcccataactcttcttccgttacctcttttggtcctatccattaggttttaacatcaaatgtctaaggtgaaccatatttaaagatg 13160  T
Q  104 gtctaccatagaccttactaagttttttaattttaactatttgatatttt 153  Q
    ||| |||||| ||| ||||||  |||||||| ||||| ||||||| ||||    
T  13159 gtccaccatataccctactaaaatttttaatcttaaccatttgatttttt 13110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 96218 - 96283
Alignment:
Q  1 aagtgtctcaatttggtcccataactcttatgccgtttaccattttggtcctttccgtctgttttt 66  Q
    ||||||||||||||| ||| |||| |||| | |||||||||||||||||| | ||||| |||||||    
T  96218 aagtgtctcaatttgatccgataaatcttcttccgtttaccattttggtcatgtccgtgtgttttt 96283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 145924 - 145878
Alignment:
Q  4 tgtctcaatttggtcccataactcttatgccgtttaccattttggtc 50  Q
    ||||| |||||||||| |||| ||||||||||||||| |||||||||    
T  145924 tgtcttaatttggtccaataaatcttatgccgtttactattttggtc 145878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University