View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18521_high_32 (Length: 237)

Name: NF18521_high_32
Description: NF18521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18521_high_32
NF18521_high_32
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-221)||(26332-26552)
[»] chr5 (36 HSPs)
chr5 (1-74)||(7613717-7613790)
chr5 (1-66)||(25814374-25814439)
chr5 (1-68)||(20189902-20189969)
chr5 (1-74)||(6610847-6610920)
chr5 (1-74)||(6735382-6735455)
chr5 (5-74)||(33988214-33988283)
chr5 (24-74)||(8369721-8369771)
chr5 (1-75)||(25344762-25344836)
chr5 (1-74)||(4475256-4475329)
chr5 (1-74)||(11099502-11099575)
chr5 (25-74)||(35646114-35646163)
chr5 (21-74)||(42575663-42575716)
chr5 (25-69)||(13135787-13135831)
chr5 (1-61)||(35334564-35334624)
chr5 (1-61)||(39183665-39183725)
chr5 (24-74)||(16283612-16283662)
chr5 (1-74)||(3725196-3725269)
chr5 (1-74)||(8692843-8692916)
chr5 (1-74)||(15254775-15254848)
chr5 (1-74)||(36446712-36446785)
chr5 (21-58)||(39008158-39008195)
chr5 (24-68)||(24231043-24231087)
chr5 (1-56)||(5357860-5357915)
chr5 (1-56)||(19889576-19889631)
chr5 (21-68)||(22582903-22582949)
chr5 (21-56)||(25111191-25111226)
chr5 (21-56)||(25170282-25170317)
chr5 (1-56)||(31956740-31956795)
chr5 (24-58)||(17242995-17243029)
chr5 (23-56)||(4044520-4044553)
chr5 (19-56)||(16954893-16954930)
chr5 (25-74)||(26330282-26330331)
chr5 (1-54)||(34534932-34534985)
chr5 (25-74)||(36469119-36469168)
chr5 (24-61)||(42211366-42211403)
chr5 (4-68)||(35585647-35585711)
[»] chr4 (41 HSPs)
chr4 (1-69)||(39979790-39979858)
chr4 (1-74)||(48740530-48740603)
chr4 (4-74)||(44020786-44020856)
chr4 (1-74)||(51572252-51572325)
chr4 (23-74)||(49812261-49812312)
chr4 (20-74)||(9093786-9093840)
chr4 (1-74)||(18849783-18849856)
chr4 (1-74)||(29644365-29644438)
chr4 (1-74)||(42544219-42544292)
chr4 (1-74)||(51527429-51527501)
chr4 (1-57)||(38977001-38977057)
chr4 (1-61)||(41710181-41710241)
chr4 (1-68)||(1825278-1825345)
chr4 (24-74)||(54729508-54729558)
chr4 (1-74)||(4360432-4360505)
chr4 (1-74)||(22872412-22872485)
chr4 (1-61)||(42024238-42024298)
chr4 (21-56)||(25149481-25149516)
chr4 (24-74)||(27977180-27977230)
chr4 (21-58)||(1796282-1796319)
chr4 (1-74)||(3686021-3686094)
chr4 (1-74)||(16493321-16493393)
chr4 (1-74)||(41436491-41436564)
chr4 (21-61)||(33047522-33047562)
chr4 (10-74)||(50328095-50328159)
chr4 (27-74)||(8065569-8065616)
chr4 (1-68)||(38160182-38160249)
chr4 (1-68)||(41203747-41203814)
chr4 (1-56)||(42132823-42132878)
chr4 (24-75)||(43335046-43335097)
chr4 (1-52)||(49401666-49401717)
chr4 (24-58)||(17237076-17237110)
chr4 (21-75)||(43421330-43421384)
chr4 (23-56)||(29550769-29550802)
chr4 (24-56)||(3505755-3505787)
chr4 (1-61)||(26799253-26799313)
chr4 (24-56)||(32949891-32949923)
chr4 (30-74)||(35909597-35909641)
chr4 (24-56)||(39052943-39052975)
chr4 (24-56)||(48400673-48400705)
chr4 (25-57)||(49306621-49306653)
[»] chr8 (34 HSPs)
chr8 (1-75)||(12653697-12653771)
chr8 (4-74)||(38252462-38252532)
chr8 (1-74)||(2349360-2349433)
chr8 (19-75)||(22324978-22325034)
chr8 (1-74)||(44790446-44790519)
chr8 (1-67)||(34133137-34133203)
chr8 (1-61)||(29615808-29615868)
chr8 (23-74)||(5392081-5392132)
chr8 (1-56)||(34287121-34287176)
chr8 (1-68)||(45425495-45425562)
chr8 (25-75)||(31410631-31410681)
chr8 (1-75)||(42412406-42412480)
chr8 (1-74)||(5962497-5962570)
chr8 (1-66)||(32967309-32967374)
chr8 (21-74)||(33190933-33190986)
chr8 (24-68)||(39171576-39171620)
chr8 (1-68)||(32241454-32241521)
chr8 (4-57)||(138740-138793)
chr8 (24-61)||(28802800-28802837)
chr8 (3-59)||(3384546-3384602)
chr8 (25-61)||(42558618-42558654)
chr8 (1-56)||(886490-886545)
chr8 (1-56)||(2797050-2797105)
chr8 (1-56)||(10728964-10729019)
chr8 (1-56)||(14117472-14117527)
chr8 (24-74)||(139055-139105)
chr8 (28-74)||(12958005-12958051)
chr8 (21-74)||(7042782-7042835)
chr8 (16-74)||(29730920-29730980)
chr8 (23-56)||(41726553-41726586)
chr8 (24-56)||(325158-325190)
chr8 (24-56)||(5878268-5878300)
chr8 (24-56)||(11637173-11637205)
chr8 (24-56)||(39998196-39998228)
[»] chr6 (14 HSPs)
chr6 (1-74)||(15081433-15081506)
chr6 (1-74)||(31265789-31265862)
chr6 (3-74)||(7301104-7301175)
chr6 (1-66)||(9755179-9755244)
chr6 (1-74)||(30063973-30064046)
chr6 (1-74)||(3604624-3604697)
chr6 (25-74)||(34915837-34915886)
chr6 (1-49)||(2657911-2657959)
chr6 (1-56)||(33921511-33921566)
chr6 (24-74)||(4238454-4238504)
chr6 (24-74)||(14312672-14312722)
chr6 (1-75)||(33109383-33109457)
chr6 (25-74)||(3874074-3874123)
chr6 (23-56)||(33017986-33018019)
[»] chr3 (32 HSPs)
chr3 (1-74)||(45392100-45392173)
chr3 (1-74)||(32827328-32827401)
chr3 (4-68)||(48744272-48744336)
chr3 (1-61)||(37041910-37041970)
chr3 (1-61)||(54493918-54493978)
chr3 (27-74)||(33994693-33994740)
chr3 (24-75)||(53876459-53876510)
chr3 (19-74)||(54782991-54783046)
chr3 (24-74)||(10855027-10855077)
chr3 (1-74)||(41031582-41031658)
chr3 (21-74)||(54122248-54122301)
chr3 (24-69)||(54458338-54458383)
chr3 (1-61)||(15280615-15280675)
chr3 (21-68)||(43639546-43639593)
chr3 (24-74)||(22202413-22202463)
chr3 (21-74)||(9017831-9017884)
chr3 (1-66)||(14756146-14756211)
chr3 (21-74)||(21296527-21296580)
chr3 (1-74)||(32023125-32023198)
chr3 (26-74)||(17777018-17777066)
chr3 (26-74)||(19078319-19078367)
chr3 (1-68)||(2868584-2868651)
chr3 (23-74)||(26134727-26134778)
chr3 (25-56)||(30261543-30261574)
chr3 (24-59)||(49003303-49003338)
chr3 (1-56)||(54845558-54845613)
chr3 (23-61)||(46786018-46786056)
chr3 (24-74)||(52325210-52325260)
chr3 (23-56)||(1334823-1334856)
chr3 (1-66)||(11529143-11529208)
chr3 (1-69)||(36097684-36097752)
chr3 (24-56)||(41287295-41287327)
[»] chr1 (35 HSPs)
chr1 (1-74)||(5442350-5442423)
chr1 (1-61)||(48242628-48242688)
chr1 (1-61)||(49494201-49494261)
chr1 (1-74)||(50267463-50267536)
chr1 (12-75)||(51848718-51848781)
chr1 (21-74)||(52830439-52830492)
chr1 (32-75)||(6787288-6787331)
chr1 (1-68)||(26755986-26756053)
chr1 (2-56)||(5563025-5563079)
chr1 (1-66)||(19532952-19533017)
chr1 (1-74)||(28277063-28277136)
chr1 (1-74)||(36467220-36467293)
chr1 (24-68)||(7785305-7785349)
chr1 (1-61)||(28839349-28839409)
chr1 (1-61)||(51749221-51749281)
chr1 (23-61)||(3555593-3555631)
chr1 (25-66)||(948620-948661)
chr1 (3-56)||(27391359-27391412)
chr1 (25-74)||(36784348-36784397)
chr1 (1-61)||(43895857-43895917)
chr1 (23-74)||(13500754-13500805)
chr1 (1-56)||(36232832-36232887)
chr1 (23-61)||(32348250-32348288)
chr1 (3-61)||(46880428-46880485)
chr1 (23-56)||(12267674-12267707)
chr1 (3-56)||(16040089-16040142)
chr1 (1-74)||(17342838-17342911)
chr1 (25-70)||(21304418-21304463)
chr1 (1-74)||(27831856-27831929)
chr1 (23-56)||(37281040-37281073)
chr1 (24-68)||(32587798-32587842)
chr1 (1-69)||(38664411-38664479)
chr1 (25-69)||(42926168-42926212)
chr1 (25-61)||(45889286-45889322)
chr1 (25-61)||(46496052-46496088)
[»] chr7 (43 HSPs)
chr7 (9-65)||(48981674-48981730)
chr7 (1-74)||(5724731-5724804)
chr7 (1-74)||(18235200-18235273)
chr7 (9-74)||(21387504-21387569)
chr7 (1-74)||(30463026-30463099)
chr7 (1-74)||(37490642-37490715)
chr7 (12-61)||(49100539-49100588)
chr7 (1-68)||(23703926-23703993)
chr7 (1-74)||(36117671-36117745)
chr7 (21-74)||(7425902-7425955)
chr7 (1-74)||(31581467-31581540)
chr7 (1-61)||(29257557-29257617)
chr7 (9-74)||(47454022-47454087)
chr7 (1-61)||(2846713-2846773)
chr7 (1-56)||(28333181-28333236)
chr7 (1-59)||(34963850-34963908)
chr7 (1-75)||(46095443-46095517)
chr7 (1-74)||(3667901-3667974)
chr7 (1-74)||(27337897-27337970)
chr7 (1-74)||(29434604-29434677)
chr7 (21-74)||(38181898-38181951)
chr7 (1-74)||(46288455-46288528)
chr7 (25-68)||(2842082-2842125)
chr7 (1-56)||(10355777-10355832)
chr7 (21-56)||(18731469-18731504)
chr7 (24-63)||(34001894-34001933)
chr7 (1-56)||(34064225-34064280)
chr7 (10-61)||(40803663-40803714)
chr7 (19-61)||(37157198-37157240)
chr7 (1-74)||(17266037-17266110)
chr7 (25-74)||(23186167-23186216)
chr7 (23-56)||(32776015-32776048)
chr7 (1-74)||(33584573-33584646)
chr7 (23-56)||(38589766-38589799)
chr7 (1-74)||(40590849-40590922)
chr7 (23-56)||(45218200-45218233)
chr7 (24-56)||(2849288-2849320)
chr7 (25-61)||(7456621-7456657)
chr7 (23-74)||(11616593-11616645)
chr7 (30-74)||(23058858-23058902)
chr7 (24-56)||(24288456-24288488)
chr7 (24-56)||(37496439-37496471)
chr7 (1-37)||(45890898-45890934)
[»] chr2 (32 HSPs)
chr2 (1-75)||(435101-435175)
chr2 (1-74)||(30757592-30757665)
chr2 (1-74)||(43077750-43077823)
chr2 (1-74)||(28108399-28108472)
chr2 (24-74)||(5211982-5212032)
chr2 (24-74)||(23684992-23685042)
chr2 (19-68)||(7650005-7650054)
chr2 (1-74)||(18181237-18181310)
chr2 (1-74)||(24775832-24775905)
chr2 (21-66)||(44534515-44534560)
chr2 (21-68)||(3100430-3100477)
chr2 (1-74)||(13375213-13375287)
chr2 (1-59)||(41436089-41436147)
chr2 (21-74)||(1908518-1908571)
chr2 (21-74)||(2756704-2756757)
chr2 (1-74)||(28526974-28527047)
chr2 (21-74)||(28572238-28572291)
chr2 (23-68)||(28925878-28925923)
chr2 (1-66)||(39095641-39095706)
chr2 (1-56)||(4794583-4794638)
chr2 (1-56)||(37529113-37529168)
chr2 (24-74)||(2882018-2882068)
chr2 (21-55)||(6685706-6685740)
chr2 (23-56)||(9724910-9724943)
chr2 (25-74)||(11726746-11726795)
chr2 (24-57)||(13538310-13538343)
chr2 (1-54)||(16864978-16865031)
chr2 (24-61)||(28301467-28301504)
chr2 (1-74)||(37028768-37028841)
chr2 (24-61)||(37247921-37247958)
chr2 (24-52)||(7213508-7213536)
chr2 (1-61)||(8031751-8031811)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-68)||(14466-14533)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-74)||(8897-8970)
[»] scaffold0034 (1 HSPs)
scaffold0034 (24-74)||(98858-98908)
[»] scaffold0028 (1 HSPs)
scaffold0028 (24-61)||(26646-26683)
[»] scaffold0006 (1 HSPs)
scaffold0006 (21-74)||(229853-229906)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-56)||(171236-171291)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-56)||(230266-230321)
[»] scaffold0003 (1 HSPs)
scaffold0003 (2-56)||(352503-352557)
[»] scaffold0086 (1 HSPs)
scaffold0086 (24-56)||(5851-5883)


Alignment Details
Target: scaffold0045 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 26332 - 26552
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaatatgtagaagagccaattcgtattggaa 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26332 attaatattacttttatcatttccaattcaatatattccactttacatttatgatagtggataatgcactaatatgtagaagagccaattcgtattggaa 26431  T
Q  101 aatgtgtggtgaacatccaagcaccccaataacacaatgtgagaaaaagaaagagacgaatatgatagatgtgatagacctccataatctccctccttcg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26432 aatgtgtggtgaacatccaagcaccccaataacacaatgtgagaaaaagaaagagacgaatatgatagatgtgatagacctccataatctccctccttcg 26531  T
Q  201 agaactcaaaatagacacttt 221  Q
     ||||||||||||||||||||    
T  26532 tgaactcaaaatagacacttt 26552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7613717 - 7613790
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  7613717 attaatattacttttatcatttccaattcaatatatttcactttacatttatgatagtggagaatgcaccaata 7613790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25814374 - 25814439
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatg 66  Q
    |||||||||||| | || ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25814374 attaatattactctcatcatttccaattcaatatatttcactttacatttatgatagtggataatg 25814439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20189902 - 20189969
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgca 68  Q
    |||||||||||||| || |||  ||||||||||||||||||||||||||||||||| |||| ||||||    
T  20189902 attaatattactttcatcattctcaattcaatatattccactttacatttatgataatggagaatgca 20189969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 6610847 - 6610920
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| || | | | ||||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  6610847 attaatattactttcatcactccgaattcaatatatttcactttacatttatgatagtggagaatgcaccaata 6610920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6735455 - 6735382
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| || | ||| |||| ||||||||||||||| |||||||||||||||| ||||||| ||||    
T  6735455 attaatattactttcatcacttcaaatttaatatattccactttgcatttatgatagtggagaatgcacaaata 6735382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 33988214 - 33988283
Alignment:
Q  5 atattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||| || | | ||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  33988214 atattactttcattactcccaattcaatatattccactttacatttatgatagtggagaatacaccaata 33988283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 8369771 - 8369721
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  8369771 caattcaatatattccactttgcatttatgatagtggagaatgcaccaata 8369721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 25344836 - 25344762
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaatat 75  Q
    ||||||| |||||| || |||  ||||||||||||||| ||||||||||||||||| |||  |||||||||||||    
T  25344836 attaatactactttcatcattctcaattcaatatattctactttacatttatgataatggtgaatgcactaatat 25344762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4475256 - 4475329
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| ||||||||| ||||||||||||| || ||||||||| ||||||||||| |||  ||||||| ||||    
T  4475256 attaatactacttttatcatttccaattcaacattttccactttgcatttatgataatggtgaatgcaccaata 4475329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11099575 - 11099502
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| |||||| || | | ||||||||||||||||||||||  ||||||||||||||| ||||||| ||||    
T  11099575 attaatactactttcatcactcccaattcaatatattccactttgtatttatgatagtggagaatgcaccaata 11099502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 35646163 - 35646114
Alignment:
Q  25 aattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  35646163 aattcaatatattccactttgcatttatgatagtggagaatgcaccaata 35646114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 42575716 - 42575663
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||||||||||||| |||||||||||||||| ||| ||| ||||    
T  42575716 ttccaattcaatatattccactttgcatttatgatagtggagaatacaccaata 42575663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 13135787 - 13135831
Alignment:
Q  25 aattcaatatattccactttacatttatgatagtggataatgcac 69  Q
    |||||||||||||||||||| |||||||||||||||| |||||||    
T  13135787 aattcaatatattccactttgcatttatgatagtggagaatgcac 13135831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 35334624 - 35334564
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    ||||||| |||||| || | | |||||||||||||||||||||| ||||||||||||||||    
T  35334624 attaatactactttcatcactcccaattcaatatattccactttgcatttatgatagtgga 35334564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39183725 - 39183665
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    |||||||||||||| || | |  ||||||||||||||||||||| ||||||||||||||||    
T  39183725 attaatattactttcatcactctcaattcaatatattccactttgcatttatgatagtgga 39183665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 16283662 - 16283612
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||| ||||    
T  16283662 caattcaatatattccactttgcatttatgatagttgagaatgcaccaata 16283612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3725196 - 3725269
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| || | |  |||||| |||||||||||| | |||||||||||||||| ||||||| ||||    
T  3725196 attaatattactttcatcactcacaattcgatatattccactatgcatttatgatagtggagaatgcaccaata 3725269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8692916 - 8692843
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| |  | |||||||| |||||||| || ||| |||||||||||||||| ||||||| ||||    
T  8692916 attaatattactttcacaacttccaatttaatatatttcattttgcatttatgatagtggagaatgcaccaata 8692843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15254775 - 15254848
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| || | || ||||||||||||||| | ||| |||| ||||||| ||| ||||||||||||    
T  15254775 attaatattactttcatcactttcaattcaatatattctaatttgcattaatgatagcggagaatgcactaata 15254848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36446785 - 36446712
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| |||||| || | || ||||||||||||||  ||||| |||||||||||||||| ||||||| ||||    
T  36446785 attaatactactttcatcactttcaattcaatatattatactttgcatttatgatagtggagaatgcacaaata 36446712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 39008158 - 39008195
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagt 58  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  39008158 ttccaattcaatatatttcactttacatttatgatagt 39008195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 24231043 - 24231087
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgca 68  Q
    ||||||||||||||||||||| |||||||| ||||||| ||||||    
T  24231043 caattcaatatattccactttccatttatggtagtggagaatgca 24231087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5357915 - 5357860
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||| |  | ||||||| |||||||||| |||||||||||||||||    
T  5357915 attaatattactttcaccacttccaatacaatatattctactttacatttatgata 5357860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19889631 - 19889576
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||| |  | || ||||||||||||||| |||||||||||||||||    
T  19889631 attaatattactttcaccactttcaattcaatatattctactttacatttatgata 19889576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 22582949 - 22582903
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtggataatgca 68  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  22582949 ttccaattcaatat-ttccactttgcatttatgatagtggagaatgca 22582903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 25111226 - 25111191
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||||||| |||||||||||||||||    
T  25111226 ttccaattcaatatattctactttacatttatgata 25111191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 25170317 - 25170282
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||||||| |||||||||||||||||    
T  25170317 ttccaattcaatatattctactttacatttatgata 25170282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31956740 - 31956795
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    ||||||||||||||||| | |  ||| ||||||||||| |||||||||||||||||    
T  31956740 attaatattacttttatcactctcaactcaatatattcaactttacatttatgata 31956795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 17243029 - 17242995
Alignment:
Q  24 caattcaatatattccactttacatttatgatagt 58  Q
    ||||||||||||||||||||| |||||||||||||    
T  17243029 caattcaatatattccactttgcatttatgatagt 17242995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 4044553 - 4044520
Alignment:
Q  23 ccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||||| |||||||||||||||||    
T  4044553 ccaattcaatatattctactttacatttatgata 4044520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 16954893 - 16954930
Alignment:
Q  19 atttccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||||||||| | |||||||||||||||    
T  16954893 atttccaattcaatatattctattttacatttatgata 16954930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 26330282 - 26330331
Alignment:
Q  25 aattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||||||||| ||||||||||| |||  |||| |||||||    
T  26330282 aattcaatatattccactttgcatttatgataatggtaaatgaactaata 26330331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34534932 - 34534985
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatga 54  Q
    ||||||||||||||||| |||  ||||||||||||||  |||||| ||||||||    
T  34534932 attaatattacttttatcattctcaattcaatatattatactttatatttatga 34534985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 36469168 - 36469119
Alignment:
Q  25 aattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||  ||||| |||||||||||||||| ||||||| ||||    
T  36469168 aattcaatatattatactttgcatttatgatagtggagaatgcaccaata 36469119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 42211366 - 42211403
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtgga 61  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  42211366 caattcaatatatttcactttgcatttatgatagtgga 42211403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 35585711 - 35585647
Alignment:
Q  4 aatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgca 68  Q
    ||||||||||| || | |  |||||||||||||| ||||||   |||||||||||||||||||||    
T  35585711 aatattactttcatcactctcaattcaatatatttcactttgtctttatgatagtggataatgca 35585647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 39979790 - 39979858
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcac 69  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39979790 attaatattactttcatcatttccaattcaatatattccactttacatttatgatagtggagaatgcac 39979858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 48740530 - 48740603
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  48740530 attaatattacttttatcatttttaattcaatatattccactttacatttatgatagtggagaatgcaccaata 48740603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 44020856 - 44020786
Alignment:
Q  4 aatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||| |||||| || ||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  44020856 aatactactttcatcatttctaattcaatatgttccactttacatttatgatagtggataatgcaccaata 44020786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 51572325 - 51572252
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| ||||||||| | ||||||||||||||||| |||||||||||||||||||| || ||||||| ||||    
T  51572325 attaatactacttttatcacttccaattcaatatattacactttacatttatgatagtagaaaatgcaccaata 51572252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 49812261 - 49812312
Alignment:
Q  23 ccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  49812261 ccaatacaatatattccactttacatttatgatagtggataatgcaccaata 49812312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 9093840 - 9093786
Alignment:
Q  20 tttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||    
T  9093840 tttccaatttaatatattccactttacatttatgatagtggagaatgcacaaata 9093786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18849856 - 18849783
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| |  | ||||||||||||||||| |||||| |||||||||||||||| ||||||| ||||    
T  18849856 attaatattactttcacaacttccaattcaatatatttcactttgcatttatgatagtggagaatgcaccaata 18849783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29644365 - 29644438
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| |||||| || |||  ||||||||||||||| ||||||||||||||||||| || ||||||||||||    
T  29644365 attaatactactttcatcattctcaattcaatatattctactttacatttatgatagtagagaatgcactaata 29644438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42544219 - 42544292
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||| | |  ||||||||||||||||||||| |||||||||||||||| |||  |||||||    
T  42544219 attaatattacttttatcactcacaattcaatatattccactttgcatttatgatagtggagaatagactaata 42544292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 51527429 - 51527501
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||| ||| || |||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  51527429 attaatatta-tttcatcattttcaattcaatatatttcactttacatttatgatagtggagaatgcaccaata 51527501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 38977001 - 38977057
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatag 57  Q
    ||||||| |||||| || |||| ||||||||||||||||||||||||||||||||||    
T  38977001 attaatactactttcatcattttcaattcaatatattccactttacatttatgatag 38977057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41710241 - 41710181
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    |||||||||||||| || | | |||||||||||||||||||||| ||||||||||||||||    
T  41710241 attaatattactttcatcactcccaattcaatatattccactttgcatttatgatagtgga 41710181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1825345 - 1825278
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgca 68  Q
    |||||||||| ||| || |||| ||||||||||||||||||||||||||||||| ||| || ||||||    
T  1825345 attaatattattttcatcattttcaattcaatatattccactttacatttatgaaagttgagaatgca 1825278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 54729558 - 54729508
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||||||| |||||||||||||||| ||| ||||||||    
T  54729558 caattcaatatattccactttgcatttatgatagtggagaatacactaata 54729508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4360505 - 4360432
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| |||||| || |||  ||||||||||||||||||||| |||||||| ||||||| ||||||| ||||    
T  4360505 attaatactactttcatcattcacaattcaatatattccactttgcatttatgctagtggagaatgcaccaata 4360432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22872485 - 22872412
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| || | |  ||||||||||||||||||||| ||||||||||| |||| ||||||| ||||    
T  22872485 attaatattactttcatcactctcaattcaatatattccactttgcatttatgataatggagaatgcaccaata 22872412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42024298 - 42024238
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    ||||||| |||||| || | |||||||||||||||||||||||| ||||||| ||||||||    
T  42024298 attaatactactttcatcacttccaattcaatatattccactttgcatttataatagtgga 42024238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 25149481 - 25149516
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgata 56  Q
    ||||||||||||||||||||||||||||||||||||    
T  25149481 ttccaattcaatatattccactttacatttatgata 25149516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 27977180 - 27977230
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||||||| ||||||| |||||||| ||||||| ||||    
T  27977180 caattcaatatattccactttgcatttataatagtggagaatgcaccaata 27977230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 1796319 - 1796282
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagt 58  Q
    |||||||||||||||||||||||| |||||||||||||    
T  1796319 ttccaattcaatatattccactttgcatttatgatagt 1796282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3686021 - 3686094
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| || | |  ||||||||||||||| ||||| ||||||| |||||||| ||||||| ||||    
T  3686021 attaatattactttcatcactctcaattcaatatattcaactttgcatttataatagtggagaatgcaccaata 3686094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 16493393 - 16493321
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| || | |||||||||||||||||||||||| || |||||||||  || ||||||| ||||    
T  16493393 attaatattactttcataacttccaattcaatatattccactttgca-ttatgatagctgagaatgcacaaata 16493321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 41436491 - 41436564
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| |||||| || |||  |||||||| |||||| ||||| |||||||||||||||| ||||||| ||||    
T  41436491 attaatactactttcatcattcgcaattcaaaatattctactttgcatttatgatagtggagaatgcaccaata 41436564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 33047522 - 33047562
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtgga 61  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  33047522 ttccaattcaatatattccactttgtatttatgatagtgga 33047562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 50328159 - 50328095
Alignment:
Q  10 acttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||| |||  |||||||||||||| |||||| |||||||||||||||  ||||||| ||||    
T  50328159 acttttatcattctcaattcaatatatttcactttgcatttatgatagtggtgaatgcaccaata 50328095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 8065569 - 8065616
Alignment:
Q  27 ttcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||| ||||||||||||||||||||| || ||||||| ||||    
T  8065569 ttcaatatataccactttacatttatgatagtagagaatgcaccaata 8065616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 38160249 - 38160182
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgca 68  Q
    ||||||||||||||||| | |  |||||||||||||| ||||||  |||||||||| |||| ||||||    
T  38160249 attaatattacttttatcactctcaattcaatatatttcactttgtatttatgataatggagaatgca 38160182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 41203747 - 41203814
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgca 68  Q
    ||||||| ||||||||| | || |||||||||||||||||||||  ||||||| ||||| | ||||||    
T  41203747 attaatactacttttatcactttcaattcaatatattccactttgtatttatggtagtgaagaatgca 41203814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42132823 - 42132878
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||| |  | |||||||||||||||||| ||||| |||||||||||    
T  42132823 attaatattactttcaccacttccaattcaatatattctactttgcatttatgata 42132878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 43335097 - 43335046
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgcactaatat 75  Q
    ||||||||||||||||||||| ||||||  ||| |||| |||||||||||||    
T  43335097 caattcaatatattccactttccatttaaaataatggagaatgcactaatat 43335046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 49401666 - 49401717
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttat 52  Q
    |||||||  ||||| || |||||||||||||||||||| |||||||||||||    
T  49401666 attaataccactttcataatttccaattcaatatattctactttacatttat 49401717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 58
Target Start/End: Original strand, 17237076 - 17237110
Alignment:
Q  24 caattcaatatattccactttacatttatgatagt 58  Q
    ||||||||||||||||||||| |||||||||||||    
T  17237076 caattcaatatattccactttgcatttatgatagt 17237110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 43421330 - 43421384
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtggataatgcactaatat 75  Q
    ||||||||||||||||| || ||| |||||||||||||||| |||| || |||||    
T  43421330 ttccaattcaatatatttcattttgcatttatgatagtggagaatgtaccaatat 43421384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 29550802 - 29550769
Alignment:
Q  23 ccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||||| |||||||||||||||||    
T  29550802 ccaattcaatatattctactttacatttatgata 29550769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 3505755 - 3505787
Alignment:
Q  24 caattcaatatattccactttacatttatgata 56  Q
    ||||||||||||||| |||||||||||||||||    
T  3505755 caattcaatatattctactttacatttatgata 3505787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26799313 - 26799253
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    ||||||| |||||| || |||  ||||||||||||||| | ||| ||||||||||||||||    
T  26799313 attaatagtactttcatcattctcaattcaatatattctattttgcatttatgatagtgga 26799253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 32949923 - 32949891
Alignment:
Q  24 caattcaatatattccactttacatttatgata 56  Q
    ||||||||||||||| |||||||||||||||||    
T  32949923 caattcaatatattctactttacatttatgata 32949891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 35909641 - 35909597
Alignment:
Q  30 aatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||| |||||||||||||| |||||||| ||||||| ||||    
T  35909641 aatatatttcactttacatttataatagtggaaaatgcaccaata 35909597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 39052975 - 39052943
Alignment:
Q  24 caattcaatatattccactttacatttatgata 56  Q
    ||||||||||||||| |||||||||||||||||    
T  39052975 caattcaatatattctactttacatttatgata 39052943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 48400705 - 48400673
Alignment:
Q  24 caattcaatatattccactttacatttatgata 56  Q
    ||||||||||||||| |||||||||||||||||    
T  48400705 caattcaatatattctactttacatttatgata 48400673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 49306621 - 49306653
Alignment:
Q  25 aattcaatatattccactttacatttatgatag 57  Q
    |||||||||||||||||||| ||||||||||||    
T  49306621 aattcaatatattccactttgcatttatgatag 49306653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 12653697 - 12653771
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaatat 75  Q
    |||||||||||||| || |||  ||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  12653697 attaatattactttcatcattctcaattcaatatattccactttacatttataatagtggataatgcaccaatat 12653771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 38252532 - 38252462
Alignment:
Q  4 aatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||| |||||| || |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  38252532 aatactactttcatcatttccaattcaatatattccactttacatttatgacagtggagaatgcactaata 38252462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2349360 - 2349433
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| |  |||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||    
T  2349360 attaatattactttcaacatttccaattcaatatattccaatttacatttatgatagtggagaatgcacaaata 2349433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 22325034 - 22324978
Alignment:
Q  19 atttccaattcaatatattccactttacatttatgatagtggataatgcactaatat 75  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22325034 attttcaattcaatatattccactttacatttatgatagtggaaaatgcactaatat 22324978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 44790519 - 44790446
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| |||||| |  ||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  44790519 attaatactactttcaccattcccaattcaatatattccactttacatttatgatagtggagaatgcaccaata 44790446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 34133137 - 34133203
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgc 67  Q
    |||||||||||||| || || |||||||||||||||| || |||||||||||||||||||| |||||    
T  34133137 attaatattactttcatcatatccaattcaatatatttcattttacatttatgatagtggagaatgc 34133203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 29615808 - 29615868
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    ||||||| |||||| || ||| |||||||||||||||||||||||||||||||| ||||||    
T  29615808 attaatactactttcatcattcccaattcaatatattccactttacatttatgacagtgga 29615868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 5392081 - 5392132
Alignment:
Q  23 ccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  5392081 ccaattcaatatattccactttgcatttatgatagtggagaatgcaccaata 5392132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34287176 - 34287121
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||| || ||||| ||||||||||||||||||||||||||| ||||    
T  34287176 attaatattactttcatcatttctaattcaatatattccactttacatttacgata 34287121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 45425495 - 45425562
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgca 68  Q
    |||||||||||||| || ||| | |||| ||||||||||||||| |||||||||||||||| ||||||    
T  45425495 attaatattactttcatcattcctaatttaatatattccactttgcatttatgatagtggaaaatgca 45425562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 31410681 - 31410631
Alignment:
Q  25 aattcaatatattccactttacatttatgatagtggataatgcactaatat 75  Q
    |||||||||||||||||||| |||||||||||||| ||||||||| |||||    
T  31410681 aattcaatatattccactttgcatttatgatagtgtataatgcaccaatat 31410631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 42412480 - 42412406
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaatat 75  Q
    ||||||| |||||| || | | |||||||||||||||||||||| ||||||||||| |||| ||||||| |||||    
T  42412480 attaatactactttcatcactcccaattcaatatattccactttgcatttatgataatggagaatgcaccaatat 42412406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5962570 - 5962497
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||| ||| || | | |||||||||||||||||||||| ||||||| |||||||| ||||||| ||||    
T  5962570 attaatattaatttcatcactcccaattcaatatattccactttgcatttataatagtggagaatgcaccaata 5962497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 32967374 - 32967309
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatg 66  Q
    ||||||| |||||| || |||  |||||||||||||||||||||| ||||||||||||||| ||||    
T  32967374 attaatactactttcatcattctcaattcaatatattccactttaaatttatgatagtggagaatg 32967309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 33190986 - 33190933
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||||||||||| | |||||||||||||||| |||||| |||||    
T  33190986 ttccaattcaatatattccactatgcatttatgatagtggagaatgcattaata 33190933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 39171576 - 39171620
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgca 68  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  39171576 caattcaatatattccactttgcatttatgatagtagataatgca 39171620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 32241521 - 32241454
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgca 68  Q
    |||||||||||||| |  | |||||||||| ||||||||||||| |||||||||||||| | ||||||    
T  32241521 attaatattactttcacaacttccaattcattatattccactttgcatttatgatagtgaagaatgca 32241454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 138793 - 138740
Alignment:
Q  4 aatattacttttatgatttccaattcaatatattccactttacatttatgatag 57  Q
    ||||||||||| || ||| | |||||||||||||||||||| ||||||||||||    
T  138793 aatattactttcatcattactaattcaatatattccactttgcatttatgatag 138740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 28802800 - 28802837
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtgga 61  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  28802800 caattcaatatattccactttgcatttatgatagtgga 28802837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 3384546 - 3384602
Alignment:
Q  3 taatattacttttatgatttccaattcaatatattccactttacatttatgatagtg 59  Q
    |||||||||||| || | || ||||||||||||||| ||||| ||||||||||||||    
T  3384546 taatattactttcatcactttcaattcaatatattcaactttgcatttatgatagtg 3384602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 42558654 - 42558618
Alignment:
Q  25 aattcaatatattccactttacatttatgatagtgga 61  Q
    |||||||||||||||||||| ||||||||||||||||    
T  42558654 aattcaatatattccactttgcatttatgatagtgga 42558618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 886545 - 886490
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    ||||||||||||||||| |||  |||||| |||||||| ||||| |||||||||||    
T  886545 attaatattacttttatcattctcaattcgatatattctactttgcatttatgata 886490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2797050 - 2797105
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||| || | | |||||||||||||||| ||||| |||||||||||    
T  2797050 attaatattactttcattactcccaattcaatatattctactttgcatttatgata 2797105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10729019 - 10728964
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    ||||||| |||||| || | | |||||||||||||||||||||| |||||||||||    
T  10729019 attaatactactttaatcactcccaattcaatatattccactttgcatttatgata 10728964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14117472 - 14117527
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||| |  | || ||||||||||||||| |||||||||||||||||    
T  14117472 attaatattactttcacaactttcaattcaatatattcaactttacatttatgata 14117527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 139055 - 139105
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| ||||||||||||| |||||||||||| ||| ||||||| ||||    
T  139055 caattcattatattccactttgcatttatgatagcggaaaatgcaccaata 139105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 12958051 - 12958005
Alignment:
Q  28 tcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||||||  |||||||||||| || ||||||||||||    
T  12958051 tcaatatattccactttgtatttatgatagttgagaatgcactaata 12958005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 7042782 - 7042835
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||  |||||||||||||||||||||||||| | || ||||||| ||||    
T  7042782 ttccaattttatatattccactttacatttatgataatagagaatgcaccaata 7042835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 29730980 - 29730920
Alignment:
Q  16 atgatttccaattcaatatat--tccactttacatttatgatagtggataatgcactaata 74  Q
    |||| ||||||||||||||||  || ||||| |||||||||||||||| ||||||| ||||    
T  29730980 atgagttccaattcaatatatattctactttgcatttatgatagtggagaatgcaccaata 29730920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 41726553 - 41726586
Alignment:
Q  23 ccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||||| |||||||||||||||||    
T  41726553 ccaattcaatatattctactttacatttatgata 41726586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 325190 - 325158
Alignment:
Q  24 caattcaatatattccactttacatttatgata 56  Q
    |||||||||||||||||||||| ||||||||||    
T  325190 caattcaatatattccactttatatttatgata 325158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 5878300 - 5878268
Alignment:
Q  24 caattcaatatattccactttacatttatgata 56  Q
    ||||||||||||||| |||||||||||||||||    
T  5878300 caattcaatatattctactttacatttatgata 5878268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 11637173 - 11637205
Alignment:
Q  24 caattcaatatattccactttacatttatgata 56  Q
    ||||||||||||||| |||||||||||||||||    
T  11637173 caattcaatatattctactttacatttatgata 11637205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 39998196 - 39998228
Alignment:
Q  24 caattcaatatattccactttacatttatgata 56  Q
    ||||||||||||||| |||||||||||||||||    
T  39998196 caattcaatatattctactttacatttatgata 39998228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 9e-20; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15081433 - 15081506
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| |||||| || |||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||    
T  15081433 attaatactactttcataatttccaattcaatatattccactttacgtttatgatagtggagaatgcacaaata 15081506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 31265789 - 31265862
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| |  | ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  31265789 attaatattactttcacaacttccaattcaatatattccactttacatttatgatagtggagaatgcaccaata 31265862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 7301175 - 7301104
Alignment:
Q  3 taatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||| || |||| ||||||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  7301175 taatattactttcatcattttcaattcaatatattccactttacatttatgataatggagaatgcacaaata 7301104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9755244 - 9755179
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatg 66  Q
    |||||||||| ||| || |||| ||||||||||||||| ||| |||||||||||||||||| ||||    
T  9755244 attaatattattttcatcattttcaattcaatatattctactctacatttatgatagtggagaatg 9755179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30064046 - 30063973
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| || | | |||||||||||||||||||||| ||||||| |||||||| ||| ||| ||||    
T  30064046 attaatattactttcatcactcccaattcaatatattccactttgcatttataatagtggagaatacacaaata 30063973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3604697 - 3604624
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| |  | |||||||||||||||||||||||| ||||||  ||| |||| ||||||| ||||    
T  3604697 attaatattactttcacaacttccaattcaatatattccactttgcatttacaataatggagaatgcaccaata 3604624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 34915886 - 34915837
Alignment:
Q  25 aattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||||||||| ||||||||||| |||| ||||||| ||||    
T  34915886 aattcaatatattccactttgcatttatgataatggagaatgcaccaata 34915837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2657911 - 2657959
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatt 49  Q
    |||||||||||||| || | ||||||||||||||||| |||||||||||    
T  2657911 attaatattactttcatcacttccaattcaatatatttcactttacatt 2657959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33921566 - 33921511
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    ||||||| ||||||||  | | |||||||||||||||| |||||||||||||||||    
T  33921566 attaatactacttttacaactcccaattcaatatattctactttacatttatgata 33921511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 4238454 - 4238504
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||| ||| ||||||||||||||||||||| | ||||||| ||||    
T  4238454 caattcaatagatttcactttacatttatgatagtgaagaatgcaccaata 4238504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 14312722 - 14312672
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||| ||| |||||||||||||||||| |||| ||||||| ||||    
T  14312722 caattcaatacatttcactttacatttatgataatggagaatgcaccaata 14312672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 33109383 - 33109457
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaatat 75  Q
    ||||||| |||||| || |||  |||||||||||||| || |||||||| | ||||||||| ||||||| |||||    
T  33109383 attaatactactttcatcattctcaattcaatatatttcattttacattaacgatagtggagaatgcacaaatat 33109457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 3874123 - 3874074
Alignment:
Q  25 aattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| |||||||||||||||||  | ||||||||| ||||    
T  3874123 aattcaatatattcaactttacatttatgataaagaataatgcaccaata 3874074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 33018019 - 33017986
Alignment:
Q  23 ccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||||| |||||||||||||||||    
T  33018019 ccaattcaatatattctactttacatttatgata 33017986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 9e-20; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45392100 - 45392173
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| || ||||||||||||||||||| ||||||||||||| |||||| |||||||||| ||||    
T  45392100 attaatattactttcatcatttccaattcaatatatttcactttacatttacgatagtagataatgcaccaata 45392173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 32827401 - 32827328
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| |||||| || ||||| ||||||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  32827401 attaatactactttcatcatttctaattcaatatatttcactttacatttatgatagtggagaatgcaccaata 32827328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 48744272 - 48744336
Alignment:
Q  4 aatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgca 68  Q
    ||||||||||| || |||| |||||||||||||| ||||||||||||||||||||||| ||||||    
T  48744272 aatattactttcatcattttcaattcaatatatttcactttacatttatgatagtggagaatgca 48744336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37041970 - 37041910
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    ||||||| |||||| || ||||||||||||||||||| ||||||| |||||||||||||||    
T  37041970 attaatactactttcatcatttccaattcaatatatttcactttatatttatgatagtgga 37041910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 54493918 - 54493978
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    ||||||| |||||| || |||||||||| |||||||| |||||||||||||||||||||||    
T  54493918 attaatactactttcatcatttccaatttaatatatttcactttacatttatgatagtgga 54493978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 33994693 - 33994740
Alignment:
Q  27 ttcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  33994693 ttcaatatattccactttacatttatgatagtggagaatgcaccaata 33994740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 53876510 - 53876459
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgcactaatat 75  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| |||||    
T  53876510 caattcaatatatttcactttacatttatgatagtggaaaatgcacaaatat 53876459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 54782991 - 54783046
Alignment:
Q  19 atttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||||| ||||||||||||||||||| | ||||||||| ||||    
T  54782991 atttccaattcaatatatttcactttacatttatgatagcgcataatgcaccaata 54783046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 10855027 - 10855077
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  10855027 caattcaatatattccactttgcatttatgagagtggataatgcaccaata 10855077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 41031582 - 41031658
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacat---ttatgatagtggataatgcactaata 74  Q
    ||||||| |||||| || ||||||||||||||||||| ||||||||||   ||||||||||||| ||||||| ||||    
T  41031582 attaatactactttcatcatttccaattcaatatatttcactttacatttattatgatagtggaaaatgcaccaata 41031658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 54122301 - 54122248
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||||| ||||    
T  54122301 ttccaattcaatatatttcactttgcatttatgatagtggagaatgcaccaata 54122248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 54458383 - 54458338
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgcac 69  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||    
T  54458383 caattcaatatattccactttacatttatgataatggagaatgcac 54458338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15280615 - 15280675
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    ||||||| |||||| || | | |||||||||||||||||||||| ||||||||||||||||    
T  15280615 attaatactactttcatcactcccaattcaatatattccactttccatttatgatagtgga 15280675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 43639593 - 43639546
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtggataatgca 68  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  43639593 ttccaattcaatatatttcactttgcatttatgatagtggaaaatgca 43639546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 22202463 - 22202413
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||| ||||||||| ||||| |||||||||||||||||||||||| ||||    
T  22202463 caatttaatatattcaactttgcatttatgatagtggataatgcaccaata 22202413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 9017831 - 9017884
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||| |||||| ||||||| |||||||| ||||||| ||||    
T  9017831 ttccaattcaatatatttcactttgcatttataatagtggagaatgcaccaata 9017884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 14756211 - 14756146
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatg 66  Q
    ||||||| || |||||| |||| ||||| ||||||||| ||||| |||||||||||||||| ||||    
T  14756211 attaatactatttttatcattttcaatttaatatattctactttgcatttatgatagtggagaatg 14756146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 21296580 - 21296527
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||||||| ||||| |||||||||||||| | ||||||| ||||    
T  21296580 ttccaattcaatatattctactttgcatttatgatagtgaaaaatgcaccaata 21296527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 32023198 - 32023125
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| || | |  ||||||||||||||| ||||| ||||||| |||||||| ||||||| ||||    
T  32023198 attaatattactttcatcactctcaattcaatatattcaactttgcatttataatagtggagaatgcaccaata 32023125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 17777066 - 17777018
Alignment:
Q  26 attcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||| ||||    
T  17777066 attcaatatattccactttgcatttatggtagtggagaatgcacaaata 17777018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 19078367 - 19078319
Alignment:
Q  26 attcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||| ||||    
T  19078367 attcaatatattccactttgcatttatggtagtggagaatgcacaaata 19078319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2868584 - 2868651
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgca 68  Q
    |||||||||||||| || | | ||||||| || ||||||||||| ||||||||| |||||| ||||||    
T  2868584 attaatattactttcatcactcccaattcgatttattccactttgcatttatgacagtggagaatgca 2868651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 26134778 - 26134727
Alignment:
Q  23 ccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||| |||||| |||||||||||||||| |||  |||||||    
T  26134778 ccaattcaatatatttcactttgcatttatgatagtggagaatagactaata 26134727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Complemental strand, 30261574 - 30261543
Alignment:
Q  25 aattcaatatattccactttacatttatgata 56  Q
    ||||||||||||||||||||||||||||||||    
T  30261574 aattcaatatattccactttacatttatgata 30261543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 49003303 - 49003338
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtg 59  Q
    |||||||||||||||||| |||||||||||||||||    
T  49003303 caattcaatatattccaccttacatttatgatagtg 49003338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 54845613 - 54845558
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    ||||||| |||||| || | ||| |||||||||||||||||||| |||||||||||    
T  54845613 attaatactactttcattacttctaattcaatatattccactttgcatttatgata 54845558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 46786056 - 46786018
Alignment:
Q  23 ccaattcaatatattccactttacatttatgatagtgga 61  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  46786056 ccaattcaatatatttcactttgcatttatgatagtgga 46786018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 52325210 - 52325260
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||||||| |||||||||||| | | ||||||| ||||    
T  52325210 caattcaatatattccactttgcatttatgatagcgtagaatgcaccaata 52325260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 1334856 - 1334823
Alignment:
Q  23 ccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||||| |||||||||||||||||    
T  1334856 ccaattcaatatattctactttacatttatgata 1334823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 11529208 - 11529143
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatg 66  Q
    ||||||||||||||||| | |   |||| ||||||||||||||| ||||||||||| |||| ||||    
T  11529208 attaatattacttttatcactcataatttaatatattccactttgcatttatgatattggagaatg 11529143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 36097752 - 36097684
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcac 69  Q
    |||||||||||||| || | |  ||||||||||||||||||||| ||||| | | |||||| |||||||    
T  36097752 attaatattactttcatcactctcaattcaatatattccactttgcatttctaacagtggagaatgcac 36097684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 41287295 - 41287327
Alignment:
Q  24 caattcaatatattccactttacatttatgata 56  Q
    ||||||||||||||| |||||||||||||||||    
T  41287295 caattcaatatattctactttacatttatgata 41287327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 9e-20; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 5442350 - 5442423
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| |  | |||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  5442350 attaatattactttcacaacttccaattcaatatattccactttgcatttatgatagtggagaatgcactaata 5442423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 48242688 - 48242628
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||    
T  48242688 attaatattacttttatcattctcaattcaatatattccactttacatttatgatagtgga 48242628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 49494261 - 49494201
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    |||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||    
T  49494261 attaatattactttcatcatttctaattcaatatattccactttacatttatgatagtgga 49494201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 50267536 - 50267463
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| || ||| ||||||||||||||| |||||||||||||||||| |||| ||||||| ||||    
T  50267536 attaatattactttcatcattcccaattcaatatatttcactttacatttatgataatggagaatgcaccaata 50267463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 51848781 - 51848718
Alignment:
Q  12 ttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaatat 75  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||| ||| ||| |||||    
T  51848781 ttttatcatttccaattcaatatattccactttatatttatgatagtggagaatacaccaatat 51848718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 52830492 - 52830439
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||| ||||    
T  52830492 ttccaattgaatatattccactttacatttatgatagtggaaaatgcaccaata 52830439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 6787288 - 6787331
Alignment:
Q  32 tatattccactttacatttatgatagtggataatgcactaatat 75  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  6787288 tatattccactttacatttatgatagtggataatgtactaatat 6787331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 26755986 - 26756053
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgca 68  Q
    ||||||| |||||| || |||| |||||||||||||| ||||||| ||||||||||||||| ||||||    
T  26755986 attaatactactttcatcattttcaattcaatatattacactttatatttatgatagtggagaatgca 26756053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 5563025 - 5563079
Alignment:
Q  2 ttaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    |||||| |||||| || |||||||||||||||| |||||||||||||||||||||    
T  5563025 ttaatactactttcatcatttccaattcaatatgttccactttacatttatgata 5563079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19533017 - 19532952
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatg 66  Q
    ||||||| |||||| || |||| || ||||||||||| ||||||||||||||||||||||| ||||    
T  19533017 attaatactactttcatcatttacagttcaatatatttcactttacatttatgatagtggagaatg 19532952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28277136 - 28277063
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||  ||||| || |||| |||||||||||||| |||||||||||||||||| |||| ||||||| ||||    
T  28277136 attaataccactttcatcattttcaattcaatatatttcactttacatttatgatactggagaatgcaccaata 28277063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36467293 - 36467220
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| || ||| || ||||||||||||||||||| |||||||||||||| |||||||| ||| ||| ||||    
T  36467293 attaatactattttcatcatttccaattcaatatatttcactttacatttatcatagtggagaatccaccaata 36467220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 7785349 - 7785305
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgca 68  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||    
T  7785349 caattcaatatatttcactttacatttatgatagtggagaatgca 7785305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28839349 - 28839409
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    ||||||| |||||| || | | |||||||||||||||||||||| ||||||||||||||||    
T  28839349 attaatactactttcatcactcccaattcaatatattccactttgcatttatgatagtgga 28839409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 51749281 - 51749221
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    |||||||||||||| || | | |||||||||||||||||||||| ||||||||||| ||||    
T  51749281 attaatattactttcatcactcccaattcaatatattccactttgcatttatgataatgga 51749221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 3555631 - 3555593
Alignment:
Q  23 ccaattcaatatattccactttacatttatgatagtgga 61  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  3555631 ccaattcaatatattccactttgcatttatgatagtgga 3555593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 948661 - 948620
Alignment:
Q  25 aattcaatatattccactttacatttatgatagtggataatg 66  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  948661 aattcaatatattccactttgcatttatgatagtggagaatg 948620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 27391359 - 27391412
Alignment:
Q  3 taatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||| |  |||| ||||||||||||||||||||| |||||||||||    
T  27391359 taatattactttcaccattttcaattcaatatattccactttgcatttatgata 27391412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 36784348 - 36784397
Alignment:
Q  25 aattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||| |||||| |||||||||||||||| ||||||| ||||    
T  36784348 aattcaatatatttcactttgcatttatgatagtggaaaatgcacaaata 36784397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43895857 - 43895917
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    |||||||||| |||||| | |  ||||||||||||||| ||||| ||||||||||||||||    
T  43895857 attaatattatttttattactctcaattcaatatattcaactttgcatttatgatagtgga 43895917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 13500805 - 13500754
Alignment:
Q  23 ccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||| ||||||||| |||||||||||||| | ||||||| ||||    
T  13500805 ccaattcaatattttccactttgcatttatgatagtgaagaatgcaccaata 13500754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36232887 - 36232832
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    ||||||| |||||| |  |||||||||||||||||||| |||||| ||||||||||    
T  36232887 attaatactactttcaccatttccaattcaatatattctactttatatttatgata 36232832  T

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Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 32348250 - 32348288
Alignment:
Q  23 ccaattcaatatattccactttacatttatgatagtgga 61  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  32348250 ccaattcaatatattccactttgcatttgtgatagtgga 32348288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 46880428 - 46880485
Alignment:
Q  3 taatattacttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    |||||||||||| || || || |||| ||||||||| ||||||||||||||||||||||    
T  46880428 taatattactttcatcatctc-aatttaatatattcaactttacatttatgatagtgga 46880485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 12267707 - 12267674
Alignment:
Q  23 ccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||||| |||||||||||||||||    
T  12267707 ccaattcaatatattctactttacatttatgata 12267674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 16040089 - 16040142
Alignment:
Q  3 taatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||| |  | ||||||| |||||||||| |||||||||||||||||    
T  16040089 taatattactttcaccacttccaatacaatatattctactttacatttatgata 16040142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17342838 - 17342911
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| ||||||||| | |  |||||||||||||| ||||||  |||||||||| |||| ||||||| ||||    
T  17342838 attaatactacttttatcactctcaattcaatatatttcactttgtatttatgataatggagaatgcaccaata 17342911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 21304418 - 21304463
Alignment:
Q  25 aattcaatatattccactttacatttatgatagtggataatgcact 70  Q
    ||||||||||||| |||||| ||||||||||||| || ||||||||    
T  21304418 aattcaatatatttcactttgcatttatgatagtcgagaatgcact 21304463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 27831856 - 27831929
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| |||||| || | | |||||||||||| ||||||||| ||||||||||| |||  ||||||| ||||    
T  27831856 attaatactactttcatcactcccaattcaatatcttccactttgcatttatgataatggtgaatgcaccaata 27831929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 37281073 - 37281040
Alignment:
Q  23 ccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||||| |||||||||||||||||    
T  37281073 ccaattcaatatattctactttacatttatgata 37281040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 32587798 - 32587842
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgca 68  Q
    |||||||||||||| |||||| ||||||||||| |||| ||||||    
T  32587798 caattcaatatatttcactttgcatttatgataatggaaaatgca 32587842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 38664411 - 38664479
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcac 69  Q
    ||||||| |||||| || ||| | |||||||||||||| | ||| ||||||||||||| || |||||||    
T  38664411 attaatactactttcatcattcctaattcaatatattcaattttgcatttatgatagtagagaatgcac 38664479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 42926168 - 42926212
Alignment:
Q  25 aattcaatatattccactttacatttatgatagtggataatgcac 69  Q
    ||||||||||||| || ||| |||||||||||||||| |||||||    
T  42926168 aattcaatatatttcattttgcatttatgatagtggagaatgcac 42926212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 45889322 - 45889286
Alignment:
Q  25 aattcaatatattccactttacatttatgatagtgga 61  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  45889322 aattcaatatattccactttgcatttatgataatgga 45889286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 46496052 - 46496088
Alignment:
Q  25 aattcaatatattccactttacatttatgatagtgga 61  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  46496052 aattcaatatattccactttgcatttatgataatgga 46496088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 48981674 - 48981730
Alignment:
Q  9 tacttttatgatttccaattcaatatattccactttacatttatgatagtggataat 65  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  48981674 tacttttatcatttccaatttaatatattccactttacatttatgatagtggataat 48981730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5724804 - 5724731
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| ||||||  | ||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  5724804 attaatactactttcttcatttctaattcaatatatttcactttacatttatgatagtggagaatgcactaata 5724731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18235200 - 18235273
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||| ||| || ||||||||||  ||||||||||||||||||||||||||||||| ||||||| ||||    
T  18235200 attaatattattttcatcatttccaatttcatatattccactttacatttatgatagtggagaatgcaccaata 18235273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 21387569 - 21387504
Alignment:
Q  9 tacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||| || |||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  21387569 tactttcatcattttcaattcaatatattccactttacatttatgatagtggagaatgcaccaata 21387504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 30463026 - 30463099
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| || |||| ||||||||||||||||| |||||||||||||| ||||| ||||||| ||||    
T  30463026 attaatattactttcatcattttcaattcaatatattccattttacatttatgattgtggagaatgcaccaata 30463099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37490715 - 37490642
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||| | |  ||||||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  37490715 attaatattacttttatcactatcaattcaatatattccactttgcatttatgatagtggagaatgcaccaata 37490642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 49100588 - 49100539
Alignment:
Q  12 ttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  49100588 ttttatcatttccaattcaatatattccactttacatttatgatagtgga 49100539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23703926 - 23703993
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgca 68  Q
    ||||||| ||||||||| |||| |||||||||||||| || |||||||||||||||||||| ||||||    
T  23703926 attaatactacttttatcattttcaattcaatatatttcattttacatttatgatagtggagaatgca 23703993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36117671 - 36117745
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatg-atagtggataatgcactaata 74  Q
    |||||||| ||||| || |||| |||||||||||||||||||||||||||||| |||||||| ||||||| ||||    
T  36117671 attaatatcactttcatcattttcaattcaatatattccactttacatttatgaatagtggagaatgcacaaata 36117745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 7425955 - 7425902
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  7425955 ttccaattcaatatattccactttgcatttatgatagtggagaatgcaccaata 7425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 31581540 - 31581467
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| |||||| || |||| ||||||||||||||||| ||||||||||||||| |||| ||||||| ||||    
T  31581540 attaatactactttcatcattttcaattcaatatattccattttacatttatgatattggagaatgcaccaata 31581467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 29257557 - 29257617
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    |||||||||||||| || | | |||||||||||||||||||||| ||||||||||||||||    
T  29257557 attaatattactttcatcactcccaattcaatatattccactttgcatttatgatagtgga 29257617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 47454022 - 47454087
Alignment:
Q  9 tacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||| || |||| ||| |||||||||| ||||||||||||||||||||||| ||||||| ||||    
T  47454022 tactttcatcatttacaaatcaatatatttcactttacatttatgatagtggagaatgcaccaata 47454087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2846773 - 2846713
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    ||||||| |||||| || | ||||||||||||||||||||||||  |||||||||||||||    
T  2846773 attaatactactttcatcaattccaattcaatatattccactttgaatttatgatagtgga 2846713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28333181 - 28333236
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||| || | | |||||||||||||||| |||||||||||||||||    
T  28333181 attaatattactttcatcactcccaattcaatatattctactttacatttatgata 28333236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34963908 - 34963850
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtg 59  Q
    |||||||||||||| || |||  ||||| |||||||| |||||||||||||||||||||    
T  34963908 attaatattactttcatcattctcaattaaatatatttcactttacatttatgatagtg 34963850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 46095517 - 46095443
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaatat 75  Q
    ||||||| ||||||||| | |  |||||||||||||| |||||| ||||||||||||| || ||||||| |||||    
T  46095517 attaatactacttttatcactctcaattcaatatatttcactttgcatttatgatagtagagaatgcacaaatat 46095443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3667974 - 3667901
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| || | |  ||||||||||||||| |||||||||||||||||    ||||||||||||||    
T  3667974 attaatattactttcatcactctcaattcaatatattctactttacatttatgataagaaataatgcactaata 3667901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27337970 - 27337897
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||  | | |||||||||||||||  |||||||||||||||||  | ||||||||| ||||    
T  27337970 attaatattacttttaccactcccaattcaatatattatactttacatttatgataaagaataatgcaccaata 27337897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29434677 - 29434604
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| |||||| || |||  ||||||||||||||||||||| ||||||||| |||||| ||| ||| ||||    
T  29434677 attaatactactttcatcattcacaattcaatatattccactttgcatttatgaaagtggagaatccaccaata 29434604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 38181951 - 38181898
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||||||| | ||| |||||||||||||||| ||||||| ||||    
T  38181951 ttccaattcaatatattctattttgcatttatgatagtggaaaatgcaccaata 38181898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 46288528 - 46288455
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| |||||| || | || ||||||||||||||||||||| |||| |||||||| || |||||| |||||    
T  46288528 attaatactactttcataactttcaattcaatatattccactttgcattaatgatagtcgagaatgcattaata 46288455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 2842125 - 2842082
Alignment:
Q  25 aattcaatatattccactttacatttatgatagtggataatgca 68  Q
    ||||||||||||| |||||| |||||||||||||||| ||||||    
T  2842125 aattcaatatatttcactttgcatttatgatagtggagaatgca 2842082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10355832 - 10355777
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    ||||||||||||||||  |||  ||||||||||||||| ||||| |||||||||||    
T  10355832 attaatattacttttaccattctcaattcaatatattctactttgcatttatgata 10355777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 18731469 - 18731504
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||||||| |||||||||||||||||    
T  18731469 ttccaattcaatatattctactttacatttatgata 18731504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 34001933 - 34001894
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggata 63  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  34001933 caattcaatatattccactttgcatttatgataatggata 34001894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34064225 - 34064280
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||| || | |  ||||||||||||||| |||||||||||||||||    
T  34064225 attaatattactttcatcactctcaattcaatatattctactttacatttatgata 34064280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 40803714 - 40803663
Alignment:
Q  10 acttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    |||||||| ||| ||||||||||||| | || ||||||||||||||||||||    
T  40803714 acttttatcattcccaattcaatataattcattttacatttatgatagtgga 40803663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 37157198 - 37157240
Alignment:
Q  19 atttccaattcaatatattccactttacatttatgatagtgga 61  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||    
T  37157198 attttcaatttaatatattctactttacatttatgatagtgga 37157240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17266037 - 17266110
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||| ||| || | | ||||||| ||||||| |||||| |||||||||||||| | ||||||| ||||    
T  17266037 attaatattattttcatcactcccaattcgatatatttcactttgcatttatgatagtgaagaatgcaccaata 17266110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 23186216 - 23186167
Alignment:
Q  25 aattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| |||||  ||||||||||||||| ||||||| ||||    
T  23186216 aattcaatatattctactttgtatttatgatagtggagaatgcaccaata 23186167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 32776015 - 32776048
Alignment:
Q  23 ccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||||| |||||||||||||||||    
T  32776015 ccaattcaatatattctactttacatttatgata 32776048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 33584573 - 33584646
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| |||||| || | | |||||||||||||||||| ||| ||||||||||| |||| ||| ||| ||||    
T  33584573 attaatactactttcatcactcccaattcaatatattccattttgcatttatgatactggagaatacaccaata 33584646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 38589766 - 38589799
Alignment:
Q  23 ccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||||| |||||||||||||||||    
T  38589766 ccaattcaatatattctactttacatttatgata 38589799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 40590922 - 40590849
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| ||||||||| |||  || |||||||||||| |||||  ||||||||||| ||| ||||||| ||||    
T  40590922 attaatactacttttattattctcatttcaatatattctactttgtatttatgatagcggaaaatgcaccaata 40590849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 45218233 - 45218200
Alignment:
Q  23 ccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||||| |||||||||||||||||    
T  45218233 ccaattcaatatattctactttacatttatgata 45218200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 2849288 - 2849320
Alignment:
Q  24 caattcaatatattccactttacatttatgata 56  Q
    ||||||||||||||| |||||||||||||||||    
T  2849288 caattcaatatattctactttacatttatgata 2849320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 7456657 - 7456621
Alignment:
Q  25 aattcaatatattccactttacatttatgatagtgga 61  Q
    |||| |||||||||||||||| |||||||||||||||    
T  7456657 aatttaatatattccactttatatttatgatagtgga 7456621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 11616593 - 11616645
Alignment:
Q  23 ccaattcaat-atattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||| |||||||||||| ||| |||||||||||| ||||||| ||||    
T  11616593 ccaattcaattatattccactttgcatatatgatagtggagaatgcaccaata 11616645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 23058858 - 23058902
Alignment:
Q  30 aatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||| |||||| |||||||||||||||| ||||||| ||||    
T  23058858 aatatatttcactttgcatttatgatagtggagaatgcaccaata 23058902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 24288456 - 24288488
Alignment:
Q  24 caattcaatatattccactttacatttatgata 56  Q
    ||||||||||||||| |||||||||||||||||    
T  24288456 caattcaatatattctactttacatttatgata 24288488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 37496471 - 37496439
Alignment:
Q  24 caattcaatatattccactttacatttatgata 56  Q
    ||||||||||||||| |||||||||||||||||    
T  37496471 caattcaatatattctactttacatttatgata 37496439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 45890934 - 45890898
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatatt 37  Q
    |||||||||||||| || |||||||||||||||||||    
T  45890934 attaatattactttcatcatttccaattcaatatatt 45890898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 435175 - 435101
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaatat 75  Q
    ||||||| |||||| || |||  |||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  435175 attaatactactttcatcattctcaattcaatatatttcactttacatttatgatagtggagaatgcactaatat 435101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30757665 - 30757592
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| |||||| || ||| |||||||||||||||||| |||||||||||||||||||| |||||| |||||    
T  30757665 attaatactactttcatcattcccaattcaatatattccaatttacatttatgatagtggaaaatgcattaata 30757592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43077823 - 43077750
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| || |||| |||||||||||||| |||||||||||||||| |||||| ||||||| ||||    
T  43077823 attaatattactttcatcattttcaattcaatatatttcactttacatttatgacagtggaaaatgcaccaata 43077750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28108472 - 28108399
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| |||||| || |||  ||||||||||||||||||||||||| |||||||||||| ||||||| ||||    
T  28108472 attaatactactttcatcattctcaattcaatatattccactttacatgtatgatagtggagaatgcaccaata 28108399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 5212032 - 5211982
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||| ||||    
T  5212032 caattcaatatattccactttgcatttatgatagttgataatgcacaaata 5211982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 23684992 - 23685042
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||||||||    
T  23684992 caattcaatatatttcactttgcatttatgatagtggagaatgcactaata 23685042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 7650054 - 7650005
Alignment:
Q  19 atttccaattcaatatattccactttacatttatgatagtggataatgca 68  Q
    |||| ||||||||||||||||||||| |||||||||||||||| ||||||    
T  7650054 attttcaattcaatatattccactttgcatttatgatagtggagaatgca 7650005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18181310 - 18181237
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| |||||| || ||| ||||||||| |||||| ||||| |||||||||||||||| ||||||| ||||    
T  18181310 attaatactactttcattattcccaattcaaaatattctactttgcatttatgatagtggagaatgcaccaata 18181237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 24775905 - 24775832
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||| |||||| || ||||  ||||||||||||| ||||||||||||||||||||||| ||| ||| ||||    
T  24775905 attaatactactttcatcatttttaattcaatatatttcactttacatttatgatagtggagaatacaccaata 24775832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 44534560 - 44534515
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtggataatg 66  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||    
T  44534560 ttccaattcaatatattccactttgcatttatgatagtggagaatg 44534515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 3100430 - 3100477
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtggataatgca 68  Q
    |||||||| ||||||||||||||| |||||||||||||||| ||||||    
T  3100430 ttccaatttaatatattccactttgcatttatgatagtggagaatgca 3100477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13375287 - 13375213
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattc-cactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||| ||| || |||  ||||||||||||||  ||||||||||||||||||||||| ||||||| ||||    
T  13375287 attaatattattttcatcattctcaattcaatatattttcactttacatttatgatagtggagaatgcaccaata 13375213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41436089 - 41436147
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtg 59  Q
    ||||||| |||||| || |||  ||||||||||||||||||||| ||||||||||||||    
T  41436089 attaatactactttcatcattctcaattcaatatattccactttgcatttatgatagtg 41436147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 1908571 - 1908518
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||||||| |||||||||||||||||  | | ||||||||||||    
T  1908571 ttccaattcaatatattctactttacatttatgataaagaagaatgcactaata 1908518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 2756704 - 2756757
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||| ||||||||| ||||||||||||||||| |||  ||||||||||||    
T  2756704 ttccaatttaatatattctactttacatttatgataatggtaaatgcactaata 2756757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28526974 - 28527047
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| |  | ||||||||||||||| |||||||||||| |||| ||||| | ||||||| ||||    
T  28526974 attaatattactttcacaacttccaattcaatatagtccactttacatatatggtagtgaagaatgcacgaata 28527047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 28572238 - 28572291
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    ||||||||||||||||| || ||| |||||||||||||||| ||||||| ||||    
T  28572238 ttccaattcaatatatttcattttgcatttatgatagtggagaatgcaccaata 28572291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 28925923 - 28925878
Alignment:
Q  23 ccaattcaatatattccactttacatttatgatagtggataatgca 68  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  28925923 ccaattcaatatatttcactttacaattatgatagtggagaatgca 28925878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39095641 - 39095706
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatg 66  Q
    |||||||||||||| || | |  ||||||||||||||||||||| ||||||||||| |||| ||||    
T  39095641 attaatattactttcatcactgacaattcaatatattccactttgcatttatgataatggagaatg 39095706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4794583 - 4794638
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    ||||||| |||||| || | || ||||||||||||||||||||| |||||||||||    
T  4794583 attaatactactttcatcactttcaattcaatatattccactttgcatttatgata 4794638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37529168 - 37529113
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||| |  | |||||||||||| ||||| |||||||||||||||||    
T  37529168 attaatattactttcaccacttccaattcaatttattctactttacatttatgata 37529113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 2882018 - 2882068
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||| ||||||||| |||||| |||||||||||||||| ||||||| ||||    
T  2882018 caatacaatatatttcactttgcatttatgatagtggagaatgcaccaata 2882068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 6685740 - 6685706
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgat 55  Q
    |||||||||||||||||| ||||||||||||||||    
T  6685740 ttccaattcaatatattctactttacatttatgat 6685706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 9724910 - 9724943
Alignment:
Q  23 ccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||||| |||||||||||||||||    
T  9724910 ccaattcaatatattctactttacatttatgata 9724943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 11726795 - 11726746
Alignment:
Q  25 aattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| ||||| || ||||||||||||| |||||| |||||    
T  11726795 aattcaatatattctactttgcaattatgatagtggagaatgcattaata 11726746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 13538343 - 13538310
Alignment:
Q  24 caattcaatatattccactttacatttatgatag 57  Q
    ||||||||||| ||||||||||||||||||||||    
T  13538343 caattcaatatcttccactttacatttatgatag 13538310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16865031 - 16864978
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatga 54  Q
    |||||||| ||||| || |||  |||||||||||||| ||||||||||||||||    
T  16865031 attaatatcactttcatcattcacaattcaatatatttcactttacatttatga 16864978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 28301467 - 28301504
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtgga 61  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  28301467 caattcaatatatttcactttgcatttatgatagtgga 28301504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 37028768 - 37028841
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| || | || || ||||  ||||| |||||||||||||||||| |||||||| ||| ||||    
T  37028768 attaatattactttcatcactttcagttcataatatttcactttacatttatgataatggataatacaccaata 37028841  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 37247958 - 37247921
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtgga 61  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  37247958 caattcaatatatttcactttgcatttatgatagtgga 37247921  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 52
Target Start/End: Original strand, 7213508 - 7213536
Alignment:
Q  24 caattcaatatattccactttacatttat 52  Q
    |||||||||||||||||||||||||||||    
T  7213508 caattcaatatattccactttacatttat 7213536  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8031751 - 8031811
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtgga 61  Q
    ||||||| ||||||||| |||  ||||||||||||||  ||||| ||||||||||| ||||    
T  8031751 attaatactacttttatcattcacaattcaatatatttaactttgcatttatgataatgga 8031811  T

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Target: scaffold0058 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 14466 - 14533
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgca 68  Q
    ||||||| |||||| || |||| ||||||||||||||||||||||||||||||| |||||| ||||||    
T  14466 attaatactactttcatcattttcaattcaatatattccactttacatttatgacagtggagaatgca 14533  T

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Target: scaffold0221 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8897 - 8970
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||| || |||  ||||||||||||||||||||| ||||||| |||||||| ||||||| ||||    
T  8897 attaatattactttcatcattctcaattcaatatattccactttgcatttataatagtggagaatgcaccaata 8970  T

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Target: scaffold0034 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 98858 - 98908
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||||||||||| |||||| || ||||||||||||| ||||    
T  98858 caattcaatatattccactttatatttattatggtggataatgcaccaata 98908  T

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Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 26646 - 26683
Alignment:
Q  24 caattcaatatattccactttacatttatgatagtgga 61  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  26646 caattcaatatattccactttgcatttatgatagtgga 26683  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 229853 - 229906
Alignment:
Q  21 ttccaattcaatatattccactttacatttatgatagtggataatgcactaata 74  Q
    |||||||||||||||| ||||||| ||||||||||| |||| ||||||| ||||    
T  229853 ttccaattcaatatataccactttgcatttatgataatggagaatgcaccaata 229906  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 171236 - 171291
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||| || | | | |||||||||||||| |||||||||||||||||    
T  171236 attaatattactttcatcactcctaattcaatatattctactttacatttatgata 171291  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 230266 - 230321
Alignment:
Q  1 attaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    |||||||||||||| |  | |||||||||||||||||||| ||| |||||||||||    
T  230266 attaatattactttcacaacttccaattcaatatattccattttgcatttatgata 230321  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 352557 - 352503
Alignment:
Q  2 ttaatattacttttatgatttccaattcaatatattccactttacatttatgata 56  Q
    ||||||||||||| |  | | |||||||||||||||| |||||||||||||||||    
T  352557 ttaatattactttcactactcccaattcaatatattctactttacatttatgata 352503  T

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Target: scaffold0086 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 5851 - 5883
Alignment:
Q  24 caattcaatatattccactttacatttatgata 56  Q
    ||||||||||||||| |||||||||||||||||    
T  5851 caattcaatatattctactttacatttatgata 5883  T

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