View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18521_low_16 (Length: 352)
Name: NF18521_low_16
Description: NF18521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18521_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 16 - 267
Target Start/End: Complemental strand, 37134562 - 37134310
Alignment:
| Q |
16 |
ataatttacaacattgcttttatatgttaatttttactnnnnnnn-caaaagtacgttaacttgttagtatttgatcatgtgagaattgaactcaaaacc |
114 |
Q |
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| T |
37134562 |
ataatttacaacattgcttttatatgttaatttttactcaaaaaaacaaaagtacgttaacttgttagtatttgatcatgtaagaattgaactcaaaacc |
37134463 |
T |
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| Q |
115 |
atccttatcattgtattccttaactctctaacctcagtcatcaaggtaaccttatattcacccttatcattccattccttaactctttaaccacggtcat |
214 |
Q |
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||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
37134462 |
atctttatcattgtattccttaactctctaacctcggtcatcaagttaaccttatattcacccttatcattccattccttaactctttaaccatggtcat |
37134363 |
T |
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| Q |
215 |
caagtttaccttatatcttttgatttatgtcattaattattaataacttgcat |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37134362 |
caagtttaccttatatcttttgatttatgtcattaattattaataacttgcat |
37134310 |
T |
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