View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18521_low_18 (Length: 335)

Name: NF18521_low_18
Description: NF18521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18521_low_18
NF18521_low_18
[»] chr7 (40 HSPs)
chr7 (19-156)||(222886-223023)
chr7 (29-131)||(5776533-5776635)
chr7 (26-131)||(42071587-42071692)
chr7 (21-126)||(49035038-49035143)
chr7 (26-131)||(666184-666289)
chr7 (26-131)||(36926476-36926581)
chr7 (26-131)||(3931316-3931422)
chr7 (26-131)||(37333764-37333870)
chr7 (42-131)||(388498-388587)
chr7 (26-131)||(26215784-26215889)
chr7 (26-131)||(43052349-43052454)
chr7 (29-133)||(7539617-7539721)
chr7 (42-131)||(15433700-15433789)
chr7 (62-131)||(28950273-28950342)
chr7 (26-133)||(7443896-7444003)
chr7 (24-156)||(8390080-8390213)
chr7 (62-132)||(18740826-18740896)
chr7 (26-124)||(22074628-22074726)
chr7 (33-133)||(8110833-8110933)
chr7 (42-112)||(5795493-5795563)
chr7 (56-133)||(27232374-27232451)
chr7 (71-127)||(18250618-18250674)
chr7 (62-133)||(3941780-3941851)
chr7 (82-133)||(45174737-45174788)
chr7 (77-131)||(35544137-35544191)
chr7 (26-126)||(45054860-45054960)
chr7 (272-320)||(222711-222761)
chr7 (26-137)||(10618088-10618199)
chr7 (26-132)||(17025964-17026071)
chr7 (63-130)||(20400276-20400343)
chr7 (62-133)||(37106250-37106321)
chr7 (272-320)||(44422451-44422501)
chr7 (18-127)||(41449206-41449315)
chr7 (70-126)||(11596405-11596461)
chr7 (61-127)||(33899577-33899644)
chr7 (86-133)||(37402002-37402049)
chr7 (61-124)||(46574231-46574294)
chr7 (18-127)||(23236754-23236863)
chr7 (56-133)||(17608125-17608202)
chr7 (69-126)||(26719252-26719309)
[»] chr4 (34 HSPs)
chr4 (18-156)||(22183822-22183960)
chr4 (18-156)||(43386593-43386731)
chr4 (18-140)||(52813058-52813180)
chr4 (18-126)||(28266717-28266825)
chr4 (26-131)||(19850199-19850304)
chr4 (26-131)||(49820445-49820550)
chr4 (26-131)||(21436374-21436479)
chr4 (24-133)||(36543359-36543468)
chr4 (26-131)||(48977071-48977176)
chr4 (26-131)||(50605522-50605627)
chr4 (26-131)||(53369129-53369234)
chr4 (18-126)||(51409087-51409195)
chr4 (26-131)||(9469494-9469599)
chr4 (42-131)||(44792761-44792850)
chr4 (56-133)||(36156876-36156953)
chr4 (56-131)||(45674389-45674464)
chr4 (29-133)||(4275508-4275612)
chr4 (21-94)||(79822-79894)
chr4 (272-320)||(22184076-22184126)
chr4 (62-133)||(54742188-54742259)
chr4 (37-112)||(55892665-55892740)
chr4 (57-131)||(43812644-43812718)
chr4 (82-131)||(48731976-48732025)
chr4 (62-130)||(6874920-6874988)
chr4 (62-134)||(32398342-32398414)
chr4 (37-108)||(12790149-12790220)
chr4 (26-124)||(46945150-46945248)
chr4 (77-133)||(48340212-48340268)
chr4 (272-320)||(43386856-43386906)
chr4 (77-127)||(44377723-44377773)
chr4 (62-111)||(24009418-24009467)
chr4 (287-320)||(52813179-52813212)
chr4 (71-127)||(48151709-48151765)
chr4 (70-126)||(52705704-52705760)
[»] chr2 (22 HSPs)
chr2 (18-156)||(44741239-44741377)
chr2 (26-131)||(41958614-41958719)
chr2 (26-131)||(36538144-36538249)
chr2 (26-131)||(12139433-12139538)
chr2 (26-126)||(20986131-20986231)
chr2 (26-126)||(27633209-27633309)
chr2 (42-131)||(33164532-33164621)
chr2 (42-126)||(33830961-33831045)
chr2 (18-156)||(3409792-3409930)
chr2 (26-131)||(26435834-26435939)
chr2 (26-127)||(40458399-40458500)
chr2 (57-133)||(38410204-38410280)
chr2 (56-133)||(30711548-30711625)
chr2 (62-133)||(34116719-34116790)
chr2 (57-133)||(39689653-39689729)
chr2 (62-133)||(20204354-20204425)
chr2 (72-131)||(34064242-34064301)
chr2 (29-108)||(39801191-39801270)
chr2 (26-126)||(2647573-2647673)
chr2 (62-133)||(33475725-33475796)
chr2 (26-124)||(40675232-40675330)
chr2 (272-320)||(44741065-44741115)
[»] chr3 (28 HSPs)
chr3 (16-148)||(52198833-52198965)
chr3 (18-156)||(38644168-38644305)
chr3 (26-131)||(32688626-32688731)
chr3 (26-133)||(39471045-39471152)
chr3 (21-90)||(15823189-15823258)
chr3 (62-133)||(33439209-33439280)
chr3 (29-133)||(39943698-39943802)
chr3 (56-131)||(23206905-23206980)
chr3 (29-126)||(33895986-33896083)
chr3 (56-133)||(54394019-54394096)
chr3 (31-131)||(46294205-46294305)
chr3 (62-126)||(54432864-54432928)
chr3 (56-119)||(45714200-45714263)
chr3 (38-131)||(41609381-41609472)
chr3 (26-127)||(7521712-7521813)
chr3 (26-132)||(12710126-12710233)
chr3 (28-99)||(30740801-30740872)
chr3 (62-133)||(45994893-45994964)
chr3 (26-132)||(25252941-25253047)
chr3 (26-126)||(5418110-5418210)
chr3 (82-126)||(20661798-20661842)
chr3 (62-133)||(7834162-7834233)
chr3 (272-320)||(38643996-38644046)
chr3 (62-129)||(53530127-53530194)
chr3 (63-156)||(8086876-8086970)
chr3 (286-320)||(52198969-52199003)
chr3 (71-156)||(9505794-9505879)
chr3 (62-127)||(26050104-26050169)
[»] chr8 (8 HSPs)
chr8 (21-129)||(22563320-22563428)
chr8 (26-111)||(11161145-11161230)
chr8 (18-131)||(23180808-23180921)
chr8 (61-133)||(33280606-33280678)
chr8 (26-126)||(43966949-43967049)
chr8 (43-116)||(1091164-1091236)
chr8 (82-131)||(453061-453110)
chr8 (26-91)||(22930858-22930922)
[»] chr6 (16 HSPs)
chr6 (71-156)||(6998659-6998744)
chr6 (18-156)||(472885-473023)
chr6 (26-131)||(10346279-10346384)
chr6 (18-130)||(25181134-25181246)
chr6 (26-126)||(18961912-18962012)
chr6 (26-133)||(7957121-7957228)
chr6 (56-133)||(10962388-10962465)
chr6 (26-127)||(12428110-12428211)
chr6 (55-131)||(27925486-27925562)
chr6 (77-155)||(4441968-4442046)
chr6 (28-133)||(3082297-3082402)
chr6 (26-126)||(22295423-22295523)
chr6 (26-133)||(7436767-7436873)
chr6 (18-54)||(6998635-6998671)
chr6 (62-130)||(17493302-17493370)
chr6 (26-126)||(33109899-33109999)
[»] chr5 (30 HSPs)
chr5 (21-126)||(1224626-1224731)
chr5 (26-131)||(27905547-27905652)
chr5 (26-131)||(18879687-18879792)
chr5 (19-126)||(5385062-5385169)
chr5 (26-133)||(32157351-32157458)
chr5 (37-131)||(22921509-22921603)
chr5 (42-131)||(29322134-29322223)
chr5 (26-119)||(39408786-39408879)
chr5 (43-131)||(38523225-38523313)
chr5 (26-119)||(39407048-39407141)
chr5 (62-133)||(2675404-2675474)
chr5 (56-133)||(15932034-15932111)
chr5 (26-119)||(26299513-26299606)
chr5 (26-119)||(34720043-34720136)
chr5 (62-133)||(20191200-20191271)
chr5 (26-119)||(27450970-27451063)
chr5 (29-133)||(43385868-43385973)
chr5 (26-126)||(41782761-41782861)
chr5 (62-124)||(31620065-31620127)
chr5 (26-119)||(1840958-1841050)
chr5 (26-119)||(26297972-26298065)
chr5 (31-119)||(34724019-34724107)
chr5 (26-133)||(10493441-10493548)
chr5 (26-108)||(19715840-19715921)
chr5 (33-126)||(4983938-4984031)
chr5 (82-133)||(20188473-20188524)
chr5 (26-75)||(3805397-3805446)
chr5 (70-126)||(14501327-14501383)
chr5 (26-126)||(26217490-26217590)
chr5 (71-127)||(27195535-27195591)
[»] chr1 (31 HSPs)
chr1 (26-124)||(37441788-37441886)
chr1 (26-131)||(36418587-36418692)
chr1 (26-120)||(32179400-32179494)
chr1 (56-131)||(24470494-24470569)
chr1 (34-126)||(21681595-21681687)
chr1 (26-132)||(24575367-24575473)
chr1 (43-133)||(15662374-15662464)
chr1 (56-133)||(14578997-14579074)
chr1 (56-133)||(14770829-14770906)
chr1 (25-156)||(31868955-31869088)
chr1 (62-131)||(35309107-35309176)
chr1 (62-119)||(38061570-38061627)
chr1 (33-126)||(45654340-45654433)
chr1 (26-126)||(43090005-43090105)
chr1 (77-133)||(46265574-46265630)
chr1 (62-133)||(42916732-42916803)
chr1 (26-123)||(29678080-29678177)
chr1 (56-133)||(35810207-35810283)
chr1 (62-130)||(7595823-7595891)
chr1 (26-126)||(13645689-13645789)
chr1 (30-102)||(48575733-48575805)
chr1 (26-132)||(5205076-5205183)
chr1 (62-133)||(15014107-15014178)
chr1 (18-133)||(23916190-23916304)
chr1 (78-124)||(47603424-47603470)
chr1 (29-133)||(7994816-7994919)
chr1 (26-126)||(15257819-15257919)
chr1 (77-132)||(28005824-28005879)
chr1 (62-133)||(42936600-42936671)
chr1 (26-126)||(7955716-7955816)
chr1 (56-133)||(40002417-40002494)
[»] scaffold0316 (1 HSPs)
scaffold0316 (26-131)||(18777-18882)
[»] scaffold0224 (1 HSPs)
scaffold0224 (62-133)||(7926-7997)
[»] scaffold0658 (1 HSPs)
scaffold0658 (82-131)||(6372-6421)
[»] scaffold0043 (1 HSPs)
scaffold0043 (82-126)||(16614-16658)
[»] scaffold0444 (1 HSPs)
scaffold0444 (77-127)||(1385-1435)


Alignment Details
Target: chr7 (Bit Score: 118; Significance: 4e-60; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 223023 - 222886
Alignment:
Q  19 aatttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgt 118  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  223023 aatttgctcggctcgaaactcgactcgagttcgacacgaactcttttttcagctcgaatttgactcgtttaaaattcacgaacagttcggttcggctcgt 222924  T
Q  119 taggttcaattcgttgctcgagaaatataattcaaaag 156  Q
    |||||||||||||||||||||| |||||||||||||||    
T  222923 taggttcaattcgttgctcgagtaatataattcaaaag 222886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 5776635 - 5776533
Alignment:
Q  29 gctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaat 128  Q
    |||||||||||| ||||| |||||| |||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||| |    
T  5776635 gctcgaaactcggctcgagttcgacaagaactattttttcagctcgagttcggctcgtttaaaattcacgaacaattcggttcggctcgttaggttcagt 5776536  T
Q  129 tcg 131  Q
    |||    
T  5776535 tcg 5776533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 42071587 - 42071692
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||||| ||||||  ||||| |||||||||||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||    
T  42071587 tcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagttcggttcgactcgttaggttc 42071686  T
Q  126 aattcg 131  Q
    | ||||    
T  42071687 agttcg 42071692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 49035143 - 49035038
Alignment:
Q  21 tttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgtta 120  Q
    |||||||||||||||||||||||||| || |||  |||||||||||| ||||||| |||||||| |||||  ||||||||||||||| ||||||||||||    
T  49035143 tttgctcggctcgaaactcgactcgagtttgacacgaactctttttttagctcgagttcgactcttttaaggttcacgaacagttcgattcggctcgtta 49035044  T
Q  121 ggttca 126  Q
    ||||||    
T  49035043 ggttca 49035038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 666289 - 666184
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||||| ||||||   |||| |||||||||||| | |||| |||||||||| |||||||||||||||||||||||||||||||||    
T  666289 tcggctcgaaactcggctcgagttcgacacaaactattttttcagctcaagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggttc 666190  T
Q  126 aattcg 131  Q
    | ||||    
T  666189 agttcg 666184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 36926476 - 36926581
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||||| ||||||  ||||| |||||||| ||||| |||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  36926476 tcggctcgaaactcggctcgagttcgacacgaactattttttcatctcgagttcggctcatttaaaattcacgaacagttcgattcggctcgttaggttc 36926575  T
Q  126 aattcg 131  Q
    | ||||    
T  36926576 agttcg 36926581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 3931422 - 3931316
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactctttttt-cagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggtt 124  Q
    ||||||||||||||| ||||| ||||||  ||||| |||||| |||||||| |||  |||||||||| ||||||||||||||||||||||||||||||||    
T  3931422 tcggctcgaaactcggctcgagttcgacacgaactatttttttcagctcgagttcagctcgtttaaagttcacgaacagttcggttcggctcgttaggtt 3931323  T
Q  125 caattcg 131  Q
    || ||||    
T  3931322 cagttcg 3931316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 37333764 - 37333870
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactctttt-ttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggtt 124  Q
    ||||||||||||||| ||||| |||||   ||||| |||| |||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||    
T  37333764 tcggctcgaaactcggctcgagttcgatatgaactatttttttcagctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggtt 37333863  T
Q  125 caattcg 131  Q
    || ||||    
T  37333864 cagttcg 37333870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 388498 - 388587
Alignment:
Q  42 ctcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    ||||| ||||||  ||||| |||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  388498 ctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggttcagttcg 388587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 26215784 - 26215889
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||||| ||||||  ||||| |||||||| ||||| |||| |||||||||| |||||||||||||||||| | ||||||||||||    
T  26215784 tcggctcgaaactcggctcgagttcgacacgaactattttttcaactcgagttcggctcgtttaaagttcacgaacagttcggtttgactcgttaggttc 26215883  T
Q  126 aattcg 131  Q
    | ||||    
T  26215884 agttcg 26215889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 43052349 - 43052454
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||| | ||||| ||||||  ||||| |||||||||||||| |||| ||| |||||| |||||||||||||| ||||||||||||||||||    
T  43052349 tcggctcgaaacttggctcgagttcgacacgaactattttttcagctcgagttcggctcatttaaagttcacgaacagttcagttcggctcgttaggttc 43052448  T
Q  126 aattcg 131  Q
    | ||||    
T  43052449 agttcg 43052454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 7539721 - 7539617
Alignment:
Q  29 gctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaat 128  Q
    |||||||||||| ||||| ||||||| ||| | |||||||||||||| |||| |||||||||| || |||||||||||||||| ||||| |||||||| |    
T  7539721 gctcgaaactcggctcgagttcgactcgaatttttttttcagctcgagttcggctcgtttaaagtttacgaacagttcggttcagctcgataggttcagt 7539622  T
Q  129 tcgtt 133  Q
    |||||    
T  7539621 tcgtt 7539617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 15433700 - 15433789
Alignment:
Q  42 ctcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    ||||| ||||||  ||||| |||||||||||||| |||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  15433700 ctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcatgaacagttcggttcggctcgttaggttcagttcg 15433789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 28950342 - 28950273
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||| ||||    
T  28950342 ttttttcagctcgagttcggctcgtttaaagttcacgaacagttcggttcagctcgttaggttcagttcg 28950273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 7443896 - 7444003
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    |||| |||||||||| ||||| ||||||   |||| |||||||||||||| |||  |||||||||  |||||||||||||||||| |||| |||||||||    
T  7443896 tcggttcgaaactcggctcgagttcgacacaaactattttttcagctcgagttcagctcgtttaatgttcacgaacagttcggtttggcttgttaggttc 7443995  T
Q  126 aattcgtt 133  Q
    | ||||||    
T  7443996 agttcgtt 7444003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 8390213 - 8390080
Alignment:
Q  24 gctcggctcgaaactcgactcgaattcgactagaactcttttt-tcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttagg 122  Q
    |||| ||||||||||| |||||||||||| || ||  |||||| | ||||||| || | |||||||||  ||||||||||  ||||||||||||||||||    
T  8390213 gctcagctcgaaactcaactcgaattcga-tacaaacctttttcttagctcgagtttggctcgtttaatgttcacgaacaactcggttcggctcgttagg 8390115  T
Q  123 ttcaattcg-ttgctcgagaaatataattcaaaag 156  Q
    ||||| ||| ||||||||| || ||||||||||||    
T  8390114 ttcaactcgtttgctcgagtaacataattcaaaag 8390080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 18740896 - 18740826
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgt 132  Q
    |||||| | ||||| ||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||    
T  18740896 ttttttaaactcgagttcgactcgtttaaagttcacgaacaactcggttcggctcgttaggttcaattcgt 18740826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 22074628 - 22074726
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggtt 124  Q
    ||||||||||||||||||||| |||||   ||||| |||||   |||| |||||| |||||||||||||||||||||  |||||||| |||||||||||    
T  22074628 tcggctcgaaactcgactcgagttcgatatgaactttttttatggctcaaattcggctcgtttaaaattcacgaacaactcggttcgactcgttaggtt 22074726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 8110833 - 8110933
Alignment:
Q  33 gaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgt 132  Q
    |||||||| ||||| ||||||  |||||||||||||||||||| |||  |||||||||| ||||| ||||||||| |||| ||| ||||||| | |||||    
T  8110833 gaaactcggctcgagttcgacacgaactcttttttcagctcgagttcagctcgtttaaagttcacaaacagttcgattcgactcattaggtttagttcgt 8110932  T
Q  133 t 133  Q
    |    
T  8110933 t 8110933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 5795563 - 5795493
Alignment:
Q  42 ctcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcg 112  Q
    ||||| ||||||  ||||| |||||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  5795563 ctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagttcggttcg 5795493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 27232451 - 27232374
Alignment:
Q  56 gaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    ||||| ||||||| |||| | |||| |||||||||| |||||||||| || |||||||||| ||||||||||||||||    
T  27232451 gaacttttttttcggctcaagttcggctcgtttaaagttcacgaacaatttggttcggctcattaggttcaattcgtt 27232374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 18250674 - 18250618
Alignment:
Q  71 ctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaa 127  Q
    ||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||||    
T  18250674 ctcgagttcggctcgtttaaagttcacgaacagttcggttcgactcgttaggttcaa 18250618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 3941780 - 3941851
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||||||||  ||| |||| |||||||||| ||||||||||||| |||||||||| ||||||||| ||||||    
T  3941780 ttttttcagtccgagttcggctcgtttaaagttcacgaacagtttggttcggctcattaggttcatttcgtt 3941851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 45174737 - 45174788
Alignment:
Q  82 ctcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| ||||||    
T  45174737 ctcgtttaaagttcacgaacaattcggttcggctcgttaggttcagttcgtt 45174788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 35544191 - 35544137
Alignment:
Q  77 ttcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    |||| |||||||||| ||||||||||| |||||| ||||||||||||||||||||    
T  35544191 ttcggctcgtttaaagttcacgaacagctcggtttggctcgttaggttcaattcg 35544137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 45054860 - 45054960
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    |||||| |||||||||||||| ||| |   ||||  ||||||  |||||| |||| |||||||||| ||||||| ||  |||||||||||||||||||||    
T  45054860 tcggcttgaaactcgactcgagttcaaaacgaacctttttttgggctcgagttcggctcgtttaaagttcacgagcaactcggttcggctcgttaggttc 45054959  T
Q  126 a 126  Q
    |    
T  45054960 a 45054960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 222761 - 222711
Alignment:
Q  272 gtagtagtaacaact--agtgcaatccatataaattctcaaatgcacttct 320  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  222761 gtagtagtaacaactgtagtgcaatccatatagattctcaaatgcacttct 222711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 10618088 - 10618199
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    |||| |||||||||||||||| | |||   ||||  |||||| | || || |||| |||||||||| ||||||||||  || ||||| ||||||||||||    
T  10618088 tcggttcgaaactcgactcgagtgcgatatgaaccttttttttaacttgagttcggctcgtttaaagttcacgaacaactcagttcgcctcgttaggttc 10618187  T
Q  126 aattcgttgctc 137  Q
    || |||||||||    
T  10618188 aactcgttgctc 10618199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 17026071 - 17025964
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaa-ctcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggtt 124  Q
    ||||||||||||||||||||| || ||   ||| || |||||| | ||||| |||| |||||||||| ||| ||||||  |||||||| |||||||||||    
T  17026071 tcggctcgaaactcgactcgagtttgaaacgaatctttttttttaactcgagttcggctcgtttaaagttcgcgaacaactcggttcgactcgttaggtt 17025972  T
Q  125 caattcgt 132  Q
    ||| ||||    
T  17025971 caactcgt 17025964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 20400276 - 20400343
Alignment:
Q  63 tttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattc 130  Q
    ||||| ||||||| || | |||||||||| |||||||| ||||||||| | |||||||||||||||||    
T  20400276 ttttttagctcgagtttggctcgtttaaagttcacgaatagttcggtttgactcgttaggttcaattc 20400343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 37106250 - 37106321
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||||||||||  | |||| ||| |||||| ||||||||||||| |||||||||| ||||||| ||||||||    
T  37106250 ttttttcagcttaagttcggctcatttaaagttcacgaacagtttggttcggctcattaggttaaattcgtt 37106321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 44422501 - 44422451
Alignment:
Q  272 gtagtagtaacaact--agtgcaatccatataaattctcaaatgcacttct 320  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  44422501 gtagtagtaacaactgtagtgcaatccatatagattctcaaatgcacttct 44422451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 41449206 - 41449315
Alignment:
Q  18 gaatttgctcggctcgaaactcgactcgaattcgactagaactcttttttc-agctcgaattcgactcgtttaaaattcacgaacagttcggttcggctc 116  Q
    ||||| ||||||||||||| ||||||||||||||| || ||  |||||||| ||||||| |||  |||||||||| |||||||||   |||||||  |||    
T  41449206 gaattggctcggctcgaaattcgactcgaattcga-tacaaaccttttttctagctcgagttcagctcgtttaaagttcacgaactactcggttcaactc 41449304  T
Q  117 gttaggttcaa 127  Q
    ||||| |||||    
T  41449305 gttagattcaa 41449315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 11596461 - 11596405
Alignment:
Q  70 gctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttca 126  Q
    |||||| |||| |||||||||| ||||||| ||  ||||||||||||||||||||||    
T  11596461 gctcgatttcggctcgtttaaagttcacgagcaactcggttcggctcgttaggttca 11596405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 33899644 - 33899577
Alignment:
Q  61 cttttttc-agctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaa 127  Q
    |||||||| ||||||| |||| |||||||||| |||||||||   |||||||| ||||||||||||||    
T  33899644 cttttttctagctcgagttcggctcgtttaaagttcacgaaccactcggttcgactcgttaggttcaa 33899577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 37402049 - 37402002
Alignment:
Q  86 tttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||||| ||||||||||||| |||||| ||| ||||||||||||||||    
T  37402049 tttaaagttcacgaacagtttggttcgactcattaggttcaattcgtt 37402002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 46574294 - 46574231
Alignment:
Q  61 cttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggtt 124  Q
    ||||||| | ||||| |||| |||||||||| ||| ||||||  ||||||||||||||||||||    
T  46574294 ctttttttaactcgagttcggctcgtttaaagttcgcgaacaactcggttcggctcgttaggtt 46574231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 23236863 - 23236754
Alignment:
Q  18 gaatttgctcggctcgaaactcgactcgaattcgactagaactcttttttc-agctcgaattcgactcgtttaaaattcacgaacagttcggttcggctc 116  Q
    ||||| ||||||||||||||||||||| ||||| |   |||| |||||||| |||| || |||| |||||||||| |||||||||   |||||||  ||     
T  23236863 gaattagctcggctcgaaactcgactcaaattcaatacgaac-cttttttctagcttgagttcggctcgtttaaagttcacgaactactcggttcatctt 23236765  T
Q  117 gttaggttcaa 127  Q
    |||||||||||    
T  23236764 gttaggttcaa 23236754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 17608125 - 17608202
Alignment:
Q  56 gaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    ||||| |||||  |||||||||||| |||| ||||| ||||||||||||| | |||  ||| ||||||||| ||||||    
T  17608125 gaactttttttctagctcgaattcggctcgcttaaagttcacgaacagtttgattcaactcattaggttcatttcgtt 17608202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 26719252 - 26719309
Alignment:
Q  69 agctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttca 126  Q
    ||||||| |||| |||||||||| |||||||||   |||||||| |||||||||||||    
T  26719252 agctcgagttcggctcgtttaaagttcacgaaccactcggttcgactcgttaggttca 26719309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 5e-56; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 22183822 - 22183960
Alignment:
Q  18 gaatttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcg 117  Q
    ||||||||||||||| ||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||    
T  22183822 gaatttgctcggctcaaaactcgactcgagttcgacacgaactcttttttcagctcgaatttgactcgtttaaagttcacgaacagttcggttccgctcg 22183921  T
Q  118 ttaggttcaattcgttgctcgagaaatataattcaaaag 156  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22183922 ttaggttcaattcgttgctcgagaaatataattcaaaag 22183960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 43386593 - 43386731
Alignment:
Q  18 gaatttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcg 117  Q
    |||||||||||||| |||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  43386593 gaatttgctcggcttgaaactcgactcgagttcgacacgaactcttttttcagctcgaattcgactcgtttaaagttcacgaacagttcggttcgactcg 43386692  T
Q  118 ttaggttcaattcgttgctcgagaaatataattcaaaag 156  Q
    |||||||||||| |||||| ||| |||||||||||||||    
T  43386693 ttaggttcaatttgttgcttgagtaatataattcaaaag 43386731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 52813058 - 52813180
Alignment:
Q  18 gaatttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcg 117  Q
    |||||||||||||| |||||||||||||| ||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||    
T  52813058 gaatttgctcggcttgaaactcgactcgagttcgacacgaactcttttttcagctcgaattcgcctcgtttaaagttcacgaacagttcggttcgactcg 52813157  T
Q  118 ttaggttcaattcgttgctcgag 140  Q
    || |||||||||||||| |||||    
T  52813158 ttcggttcaattcgttgatcgag 52813180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 28266825 - 28266717
Alignment:
Q  18 gaatttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcg 117  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||    
T  28266825 gaatttgctcggctcgaaactcgactcgagttcgacacgaactctttttttagctcgagttcgactcgtttaaagttcacgaacagttcggttcgactcg 28266726  T
Q  118 ttaggttca 126  Q
    |||||||||    
T  28266725 ttaggttca 28266717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 19850199 - 19850304
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||||| ||||||  ||||| |||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||    
T  19850199 tcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggttc 19850298  T
Q  126 aattcg 131  Q
    | ||||    
T  19850299 agttcg 19850304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 49820445 - 49820550
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||||||||| ||||||  ||||| |||||||||||||| |||| |||||||||| |||||||||||||| ||||||||||||||||||    
T  49820445 tcggctcgaaactcgactcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagttcagttcggctcgttaggttc 49820544  T
Q  126 aattcg 131  Q
    | ||||    
T  49820545 agttcg 49820550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 21436374 - 21436479
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||||||||||||  | ||| |||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  21436374 tcggctcgaaactcggctcgaattcgacacggactattttttcagctcgagttcggctcgtttaaagttcacgaacagttcggtttggctcgttaggttc 21436473  T
Q  126 aattcg 131  Q
    | ||||    
T  21436474 agttcg 21436479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 36543359 - 36543468
Alignment:
Q  24 gctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggt 123  Q
    ||||| ||||||||||| ||||| ||||||   |||| |||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||    
T  36543359 gctcgactcgaaactcggctcgagttcgacacaaactattttttcagctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggt 36543458  T
Q  124 tcaattcgtt 133  Q
    ||| ||||||    
T  36543459 tcagttcgtt 36543468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 48977071 - 48977176
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||||| ||||||  ||||| |||||||||||||| |||| ||||||||||||||||||||| || |||||||||||||||||||    
T  48977071 tcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaaattcacgaacaatttggttcggctcgttaggttc 48977170  T
Q  126 aattcg 131  Q
    | ||||    
T  48977171 agttcg 48977176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 50605522 - 50605627
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||||| ||||||  ||||| |||||||||||||| |||| || ||||||| |||||||||||||||||||||||||||||||||    
T  50605522 tcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagttcggcttgtttaaagttcacgaacagttcggttcggctcgttaggttc 50605621  T
Q  126 aattcg 131  Q
    | ||||    
T  50605622 agttcg 50605627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 53369129 - 53369234
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||||| ||||||  ||||| |||||||||||||| |||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  53369129 tcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaactgttcggttcggctcgttaggttc 53369228  T
Q  126 aattcg 131  Q
    | ||||    
T  53369229 agttcg 53369234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 51409195 - 51409087
Alignment:
Q  18 gaatttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcg 117  Q
    ||||||| |||||||||||||||| |||| ||||||  ||||| |||||| ||||||| ||||||||||||||| |||||| ||||||||| ||||||||    
T  51409195 gaatttgttcggctcgaaactcgattcgagttcgacacgaactatttttttagctcgagttcgactcgtttaaagttcacgtacagttcggctcggctcg 51409096  T
Q  118 ttaggttca 126  Q
    |||||||||    
T  51409095 ttaggttca 51409087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 9469494 - 9469599
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||||| ||||||  ||||| |||||||||||||| ||||  ||||||||| ||||||||||||||| |||||||||||||||||    
T  9469494 tcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagttcggatcgtttaaagttcacgaacagttcgattcggctcgttaggttc 9469593  T
Q  126 aattcg 131  Q
    | ||||    
T  9469594 agttcg 9469599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 44792850 - 44792761
Alignment:
Q  42 ctcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    ||||| ||||||  ||||| |||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  44792850 ctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggttcagttcg 44792761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 36156953 - 36156876
Alignment:
Q  56 gaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    ||||| |||||||||||| | ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  36156953 gaacttttttttcagctcaagttcgactcgtttaaagttcacgaacagtttggttcggctcattaggttcaattcgtt 36156876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 45674389 - 45674464
Alignment:
Q  56 gaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    ||||| |||||||||||||| |||| |||||||||| |||||||| ||||||||||||||||||||||||| ||||    
T  45674389 gaactattttttcagctcgagttcggctcgtttaaagttcacgaatagttcggttcggctcgttaggttcagttcg 45674464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 4275612 - 4275508
Alignment:
Q  29 gctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaat 128  Q
    |||||||||||| ||||| ||||||   |||| ||||||||||| |  ||||||||||||||| |||||||| ||||||||| |||||||| |||||| |    
T  4275612 gctcgaaactcggctcgagttcgacacaaactattttttcagcttgggttcgactcgtttaaagttcacgaatagttcggtttggctcgttgggttcagt 4275513  T
Q  129 tcgtt 133  Q
    |||||    
T  4275512 tcgtt 4275508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 79822 - 79894
Alignment:
Q  21 tttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaatt 94  Q
    ||||||||| |||||||||||||||| ||||||  ||||||||||||||||||| |||||||||| | ||||||    
T  79822 tttgctcggttcgaaactcgactcgagttcgacacgaactcttttttcagctcg-attcgactcgataaaaatt 79894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 22184076 - 22184126
Alignment:
Q  272 gtagtagtaacaacta--gtgcaatccatataaattctcaaatgcacttct 320  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  22184076 gtagtagtaacaactatagtgcaatccatataaattctcaaatgcacttct 22184126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 54742188 - 54742259
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||||||||||||| ||||  ||||||||| ||||||||||||| |||||| ||| | ||||||||||||||    
T  54742188 ttttttcagctcgagttcggttcgtttaaagttcacgaacagtttggttcgactcatcaggttcaattcgtt 54742259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 112
Target Start/End: Complemental strand, 55892740 - 55892665
Alignment:
Q  37 ctcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcg 112  Q
    |||||||||| ||||||  ||||| |||||| ||||||| ||||||||||||||| | |||| |||||||||||||    
T  55892740 ctcgactcgagttcgacacgaactatttttttagctcgagttcgactcgtttaaagtacacgtacagttcggttcg 55892665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 43812718 - 43812644
Alignment:
Q  57 aactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    |||| |||||||| ||| | |||| |||||||||| ||||||||||||| |||||||||| ||||||||| ||||    
T  43812718 aacttttttttcatctcaagttcggctcgtttaaagttcacgaacagtttggttcggctcattaggttcatttcg 43812644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 48732025 - 48731976
Alignment:
Q  82 ctcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| ||||    
T  48732025 ctcgtttaagattcacgaacagttcggttcggcttgttaggttcagttcg 48731976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 6874988 - 6874920
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattc 130  Q
    |||||||||||||| ||||||||| ||||| ||||| ||||||| |||||||||| ||  |||||||||    
T  6874988 ttttttcagctcgagttcgactcgcttaaagttcacaaacagtttggttcggctcattgagttcaattc 6874920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 134
Target Start/End: Complemental strand, 32398414 - 32398342
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgttg 134  Q
    |||||||||||| | |||| |||||||| | ||||||||||||| ||||||| || ||||||||| |||||||    
T  32398414 ttttttcagctcaagttcggctcgtttagagttcacgaacagtttggttcggttcattaggttcatttcgttg 32398342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 12790220 - 12790149
Alignment:
Q  37 ctcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcgg 108  Q
    |||| ||||| ||||||  ||||| |||||||| ||||| |||| |||||||||| ||||||||||||||||    
T  12790220 ctcggctcgagttcgacacgaactattttttcaactcgagttcggctcgtttaaagttcacgaacagttcgg 12790149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 46945248 - 46945150
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggtt 124  Q
    ||||||||||||||||||||| || ||    |||  |||||| | |||||||||| |||||||||||||   |||||  ||||||||||||||||||||    
T  46945248 tcggctcgaaactcgactcgagtttgaaacaaaccttttttttaactcgaattcggctcgtttaaaatttgtgaacaactcggttcggctcgttaggtt 46945150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 48340268 - 48340212
Alignment:
Q  77 ttcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    ||||||||||||||| ||||| ||||||| |||||| ||| |||| |||||||||||    
T  48340268 ttcgactcgtttaaagttcacaaacagtttggttcgactcattagattcaattcgtt 48340212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 43386856 - 43386906
Alignment:
Q  272 gtagtagtaacaact--agtgcaatccatataaattctcaaatgcacttct 320  Q
    |||||||||||||||  | ||||||||||||| ||||||||||||||||||    
T  43386856 gtagtagtaacaactgcactgcaatccatatagattctcaaatgcacttct 43386906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 44377723 - 44377773
Alignment:
Q  77 ttcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaa 127  Q
    |||| |||||||||| ||||||||||  | |||||||||||||||||||||    
T  44377723 ttcggctcgtttaaagttcacgaacaacttggttcggctcgttaggttcaa 44377773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 24009467 - 24009418
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttc 111  Q
    |||||| ||||||| |||  |||||||||| |||||||||||||||||||    
T  24009467 tttttttagctcgagttctgctcgtttaaagttcacgaacagttcggttc 24009418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 320
Target Start/End: Original strand, 52813179 - 52813212
Alignment:
Q  287 agtgcaatccatataaattctcaaatgcacttct 320  Q
    ||||||||||||||| ||||||||||||||||||    
T  52813179 agtgcaatccatatagattctcaaatgcacttct 52813212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 48151765 - 48151709
Alignment:
Q  71 ctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaa 127  Q
    ||||| ||||||||||||||| |||||||||   ||||||| ||| |||||||||||    
T  48151765 ctcgagttcgactcgtttaaagttcacgaactactcggttcagcttgttaggttcaa 48151709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 52705704 - 52705760
Alignment:
Q  70 gctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttca 126  Q
    |||||| |||| |||||||||| || |||| ||  ||||||||||||||||||||||    
T  52705704 gctcgagttcggctcgtttaaagtttacgagcaactcggttcggctcgttaggttca 52705760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 1e-53; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 44741377 - 44741239
Alignment:
Q  18 gaatttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcg 117  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||||||||||||| ||||||||||||||||| |||||||||||||||||| | ||||    
T  44741377 gaatttgctcggctcgaaactcgactcgagttcgacacgaactcttttttcagctcaaattcgactcgtttaaagttcacgaacagttcggtttgactcg 44741278  T
Q  118 ttaggttcaattcgttgctcgagaaatataattcaaaag 156  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  44741277 ttaggttcaattcgttgctcgagtaatataattcaaaag 44741239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 41958614 - 41958719
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||||| ||||||  ||||| |||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||    
T  41958614 tcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggttc 41958713  T
Q  126 aattcg 131  Q
    | ||||    
T  41958714 agttcg 41958719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 36538144 - 36538249
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||||| ||||||  ||||| |||||||||||||| || | |||||||||| |||||||||||||||||||||||||||||||||    
T  36538144 tcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagtttggctcgtttaaagttcacgaacagttcggttcggctcgttaggttc 36538243  T
Q  126 aattcg 131  Q
    | ||||    
T  36538244 agttcg 36538249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 12139433 - 12139538
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||||| ||||||  ||||| |||||||||||||| |||| |||||||||| ||||||||| ||||||||| |||||||| ||||    
T  12139433 tcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaactgttcggttcagctcgttaagttc 12139532  T
Q  126 aattcg 131  Q
    | ||||    
T  12139533 agttcg 12139538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 20986131 - 20986231
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| || || ||||||  ||||| |||||||||||||| |||| |||||||||| |||||||||||||| ||||||||||||| ||||    
T  20986131 tcggctcgaaactcggcttgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagttctgttcggctcgttaagttc 20986230  T
Q  126 a 126  Q
    |    
T  20986231 a 20986231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 27633209 - 27633309
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||| | ||| ||   |||| |||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||    
T  27633209 tcggctcgaaactcggctcaagttcaacacaaactattttttcagctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggttc 27633308  T
Q  126 a 126  Q
    |    
T  27633309 a 27633309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 33164621 - 33164532
Alignment:
Q  42 ctcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    ||||| ||||||  ||||| |||||||||||| | |||| |||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  33164621 ctcgagttcgacacgaactattttttcagctccagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggttcagttcg 33164532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 33830961 - 33831045
Alignment:
Q  42 ctcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttca 126  Q
    ||||| ||||||  ||||| |||||||||||||| |||| |||||||||| |||||||||| |||||||||||||||||||||||    
T  33830961 ctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacaattcggttcggctcgttaggttca 33831045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 3409930 - 3409792
Alignment:
Q  18 gaatttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcg 117  Q
    ||||| |||||||| |||||||||||||| |||||   ||||  |||||| | ||||| |||| |||||||||| |||||||||   |||||||   |||    
T  3409930 gaattagctcggcttgaaactcgactcgagttcgatacgaaccttttttttaactcgagttcggctcgtttaaagttcacgaactactcggttcaaatcg 3409831  T
Q  118 ttaggttcaattcgttgctcgagaaatataattcaaaag 156  Q
    |||||||||| |||||||||||| || ||||||||||||    
T  3409830 ttaggttcaactcgttgctcgagtaacataattcaaaag 3409792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 26435834 - 26435939
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    |||| ||||||||||  |||| ||||||  ||| | |||||||| ||||| ||||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  26435834 tcggttcgaaactcggttcgagttcgacacgaaatattttttcaactcgagttcgacttgtttaaagttcacgaacaattcggttcggctcgttaggttc 26435933  T
Q  126 aattcg 131  Q
    | ||||    
T  26435934 agttcg 26435939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 40458399 - 40458500
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||| ||||||||||||| |||||   ||||  |||||||| ||||| |||| |||||||||||||||||| || ||||||||| ||||||||||||    
T  40458399 tcggctcaaaactcgactcgagttcgaaacgaacatttttttcaactcgagttcggctcgtttaaaattcacgagcaattcggttcgactcgttaggttc 40458498  T
Q  126 aa 127  Q
    ||    
T  40458499 aa 40458500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 38410280 - 38410204
Alignment:
Q  57 aactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||| |||||||||||||| || | |||||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  38410280 aacttttttttcagctcgagttaggctcgtttaaagttcacgaacagtttggttcggctcattaggttcaattcgtt 38410204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 30711548 - 30711625
Alignment:
Q  56 gaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    ||||| |||||||||||| | |||| |||||||||| ||||||||||||| |||||||||| ||||||| ||||||||    
T  30711548 gaacttttttttcagctcaagttcggctcgtttaaagttcacgaacagtttggttcggctcattaggtttaattcgtt 30711625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 34116790 - 34116719
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||||||||||| | || | |||||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  34116790 ttttttcagctcaagtttggctcgtttaaagttcacgaacagtttggttcggctcattaggttcaattcgtt 34116719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 39689653 - 39689729
Alignment:
Q  57 aactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||| |||||||||||| | |||| ||| |||||| ||||||| ||||| |||||||||| ||||||||||||||||    
T  39689653 aactattttttcagctcaagttcggctcctttaaagttcacgatcagtttggttcggctcattaggttcaattcgtt 39689729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 20204425 - 20204354
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    ||||||||| |||| |||| |||||||||| ||||||||||||| |||||| ||| |||| |||||||||||    
T  20204425 ttttttcagttcgagttcggctcgtttaaagttcacgaacagtttggttcgactcattagattcaattcgtt 20204354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 34064242 - 34064301
Alignment:
Q  72 tcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    |||| |||| |||||||||| ||||||||||||||||||||| |||||||||||| ||||    
T  34064242 tcgagttcggctcgtttaaagttcacgaacagttcggttcggttcgttaggttcagttcg 34064301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 39801191 - 39801270
Alignment:
Q  29 gctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcgg 108  Q
    |||||||| ||| ||||| ||||||  |||||||||||||||||||| |||  ||||||||| |||||| ||||||||||    
T  39801191 gctcgaaattcggctcgagttcgacacgaactcttttttcagctcgagttcagctcgtttaagattcacaaacagttcgg 39801270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 2647673 - 2647573
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||||||||| ||| |    |||  ||||||  |||||| |||| |||||||||| ||||||| ||  |||||||||||||||||||||    
T  2647673 tcggctcgaaactcgactcgagttcaaaaccaacctttttttgggctcgagttcggctcgtttaaagttcacgagcaactcggttcggctcgttaggttc 2647574  T
Q  126 a 126  Q
    |    
T  2647573 a 2647573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 33475725 - 33475796
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||||||||||||| |||| |||||||||| || |||||||||| | ||||| |  ||||||||||||||||    
T  33475725 ttttttcagctcgagttcggctcgtttaaagtttacgaacagtttgattcggtttattaggttcaattcgtt 33475796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 40675232 - 40675330
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggtt 124  Q
    ||||||||||||||||||||| |||||   ||||  |||||| | ||| |||| | |||||||||| ||||| ||||  ||||||||||||| ||||||    
T  40675232 tcggctcgaaactcgactcgagttcgatacgaaccatttttttaactcaaatttggctcgtttaaagttcacaaacaactcggttcggctcgataggtt 40675330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 44741115 - 44741065
Alignment:
Q  272 gtagtagtaacaact--agtgcaatccatataaattctcaaatgcacttct 320  Q
    |||| ||||||||||  ||||||||||||||| ||||||||||||||||||    
T  44741115 gtagcagtaacaactgtagtgcaatccatatagattctcaaatgcacttct 44741065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 52198833 - 52198965
Alignment:
Q  16 atgaatttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggct 115  Q
    |||||| |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||| ||||| ||||||| |||||||||    
T  52198833 atgaatctgctcggctcgaaactcgactcgagttcgacacgaactcttttttcagctcgaatttgactcgtttaaagttcacaaacagtttggttcggct 52198932  T
Q  116 cgttaggttcaattcgttgctcgagaaatataa 148  Q
    ||||||||||||||||||||||||| |||||||    
T  52198933 cgttaggttcaattcgttgctcgagtaatataa 52198965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 38644305 - 38644168
Alignment:
Q  18 gaatttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcg 117  Q
    ||||||| ||||||| ||||||||||||| ||||||  ||||| |||||||||||||||||||||| ||||||| |||||||| ||||||||||| ||||    
T  38644305 gaatttgttcggctcaaaactcgactcgagttcgacacgaact-ttttttcagctcgaattcgacttgtttaaagttcacgaatagttcggttcgactcg 38644207  T
Q  118 ttaggttcaattcgttgctcgagaaatataattcaaaag 156  Q
    ||||||||||||||||||||||| | || ||||||||||    
T  38644206 ttaggttcaattcgttgctcgagtagtaaaattcaaaag 38644168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 32688626 - 32688731
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||  ||||| || |||  ||||| |||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||    
T  32688626 tcggctcgaaactcagctcgagtttgacatgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggttc 32688725  T
Q  126 aattcg 131  Q
    | ||||    
T  32688726 agttcg 32688731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 39471152 - 39471045
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||||| ||||||  ||||| |||||||||||||| |||  |||||||||| ||||||||||||||| ||||||||||||||||     
T  39471152 tcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagttcagctcgtttaaagttcacgaacagttcgattcggctcgttaggttt 39471053  T
Q  126 aattcgtt 133  Q
    | ||||||    
T  39471052 agttcgtt 39471045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 15823258 - 15823189
Alignment:
Q  21 tttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaa 90  Q
    |||||||||||||||||||||||||| ||||||  |||||||||||||||||||| ||||||||||||||    
T  15823258 tttgctcggctcgaaactcgactcgagttcgacatgaactcttttttcagctcgagttcgactcgtttaa 15823189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 33439280 - 33439209
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||||||||||| | ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  33439280 ttttttcagctcaagttcgactcgtttaaagttcacgaacagtttggttcggctcattaggttcaattcgtt 33439209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 39943802 - 39943698
Alignment:
Q  29 gctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaat 128  Q
    |||||||||||| ||||| || |||  ||||| ||||||||||| || |||| || ||||||| |||||| ||||||| |||||||||| |||||||| |    
T  39943802 gctcgaaactcggctcgagtttgacacgaacttttttttcagcttgagttcggcttgtttaaagttcacgtacagttcagttcggctcgataggttcatt 39943703  T
Q  129 tcgtt 133  Q
    |||||    
T  39943702 tcgtt 39943698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 23206980 - 23206905
Alignment:
Q  56 gaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    ||||| || ||| ||||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||| ||||    
T  23206980 gaactattatttgagctcgagttcggctcgtttaaagttcacgaacagttcggttcgactcgttaggttcagttcg 23206905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 33895986 - 33896083
Alignment:
Q  29 gctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttca 126  Q
    |||| ||||||||||||| ||||||  ||||  |||||| |||||||||||| |||||||||| ||||||||||| ||| |||| || | ||||||||    
T  33895986 gctccaaactcgactcgagttcgacacgaaccttttttttagctcgaattcggctcgtttaaagttcacgaacagctcgattcgacttgataggttca 33896083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 54394096 - 54394019
Alignment:
Q  56 gaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    ||||| ||||| |||||| | |||| |||||||||| |||||||||||||  ||||||||| ||||||||||||||||    
T  54394096 gaactttttttccagctcaagttcggctcgtttaaagttcacgaacagtttagttcggctcattaggttcaattcgtt 54394019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 131
Target Start/End: Complemental strand, 46294305 - 46294205
Alignment:
Q  31 tcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattc 130  Q
    ||||||||||||||||  | |||  |||||||||||| ||||||| |||  |||||||||  ||| ||||||||||||||||  |||||||||||| |||    
T  46294305 tcgaaactcgactcgagattgacacgaactctttttttagctcgagttcagctcgtttaaggttcgcgaacagttcggttcgattcgttaggttcagttc 46294206  T
Q  131 g 131  Q
    |    
T  46294205 g 46294205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 54432928 - 54432864
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttca 126  Q
    |||||| ||||||| |||| |||||||||||||||||||||  |||||||| |||||||||||||    
T  54432928 tttttttagctcgagttcggctcgtttaaaattcacgaacaactcggttcgactcgttaggttca 54432864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 45714200 - 45714263
Alignment:
Q  56 gaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgtt 119  Q
    ||||| |||||||||||| | ||||||||||||||| ||||||||||||| ||||| |||||||    
T  45714200 gaacttttttttcagctcaagttcgactcgtttaaagttcacgaacagtttggttcagctcgtt 45714263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 41609381 - 41609472
Alignment:
Q  38 tcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    ||||||||| ||||||  ||||| |||||||||||||| |||| ||||||| ||  ||||||||  |||||||||||| |||||||||| ||||    
T  41609381 tcgactcgagttcgacacgaactattttttcagctcgagttcggctcgtttgaaggtcacgaac--ttcggttcggcttgttaggttcagttcg 41609472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 7521813 - 7521712
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||||||||| |||||   |||   |||||| | ||| | || |||| ||||||||||||||||||| |||||| | ||||||||||||    
T  7521813 tcggctcgaaactcgactcgagttcgaaacgaatcttttttttaactcaagtttgacttgtttaaaattcacgaacagctcggtttgactcgttaggttc 7521714  T
Q  126 aa 127  Q
    ||    
T  7521713 aa 7521712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 12710126 - 12710233
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttc--agctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggt 123  Q
    ||||||||||||||||||||| || ||   |||| ||||||||  | ||||| |||| |||||||||| ||| ||||||  |||||||||||||||||||    
T  12710126 tcggctcgaaactcgactcgagtttgaaacgaac-cttttttcttaactcgagttcggctcgtttaaagttcgcgaacaactcggttcggctcgttaggt 12710224  T
Q  124 tcaattcgt 132  Q
    |||| ||||    
T  12710225 tcaactcgt 12710233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 30740801 - 30740872
Alignment:
Q  28 ggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacga 99  Q
    ||||||||||||||||||| ||||||  ||||  |||||| ||||||| |||| |||||||||| |||||||    
T  30740801 ggctcgaaactcgactcgagttcgacacgaaccttttttttagctcgagttcggctcgtttaaagttcacga 30740872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 45994893 - 45994964
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||||||||||| | |||| |||||||||| ||||| ||||||| |||||||||| ||  ||||||||||||    
T  45994893 ttttttcagctcaagttcggctcgtttaaagttcacaaacagtttggttcggctcattgagttcaattcgtt 45994964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 25252941 - 25253047
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||| ||||||||||||| ||| |   ||||| ||| || ||||||| |||| |||||||||| ||||||||||| |||  ||| ||| ||||||||    
T  25252941 tcggctcaaaactcgactcgagttcaatacgaactttttgttaagctcgagttcggctcgtttaaagttcacgaacagctcgactcgactcattaggttc 25253040  T
Q  126 aattcgt 132  Q
    || ||||    
T  25253041 aactcgt 25253047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 5418110 - 5418210
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||||||||| ||| |   ||||  ||||||  |||||| |||  |||||||||| ||||||| ||  ||||||||||||||||| |||    
T  5418110 tcggctcgaaactcgactcgagttcaaaacgaacctttttttgggctcgatttcagctcgtttaaagttcacgagcaactcggttcggctcgttagattc 5418209  T
Q  126 a 126  Q
    |    
T  5418210 a 5418210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 20661798 - 20661842
Alignment:
Q  82 ctcgtttaaaattcacgaacagttcggttcggctcgttaggttca 126  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||    
T  20661798 ctcgtttaaagttcacgaacaactcggttcggctcgttaggttca 20661842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 7834162 - 7834233
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||||| ||||||| |||  ||| |||||| |||||||||||||||||||  ||| |||||||||| |||||    
T  7834162 tttttttagctcgagttcagctcatttaaagttcacgaacagttcggttcaactcattaggttcaactcgtt 7834233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 38644046 - 38643996
Alignment:
Q  272 gtagtagtaacaact--agtgcaatccatataaattctcaaatgcacttct 320  Q
    |||||||||||||||  |||||||| |||||| ||||||||||||||||||    
T  38644046 gtagtagtaacaactgaagtgcaattcatatagattctcaaatgcacttct 38643996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 53530194 - 53530127
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaatt 129  Q
    |||||||||||| | |||| |||||||||| ||||||||||||| ||||| |||| |||  |||||||    
T  53530194 ttttttcagctcaagttcggctcgtttaaagttcacgaacagtttggttcagctcattaaattcaatt 53530127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 156
Target Start/End: Complemental strand, 8086970 - 8086876
Alignment:
Q  63 tttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattc-gttgctcgagaaatataattcaaaag 156  Q
    |||||||||||||| |||||||| ||  | ||| | ||||  |||||||||||||||||||||| ||| |||||||||  || |||||| |||||    
T  8086970 tttttcagctcgaactcgactcggttcgagttcgcaaacaactcggttcggctcgttaggttcagttcagttgctcgaataacataatttaaaag 8086876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 52198969 - 52199003
Alignment:
Q  286 tagtgcaatccatataaattctcaaatgcacttct 320  Q
    |||||||||||||||| ||||||||||||||||||    
T  52198969 tagtgcaatccatatagattctcaaatgcacttct 52199003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 9505879 - 9505794
Alignment:
Q  71 ctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgttgctcgagaaatataattcaaaag 156  Q
    |||||||||  |||||||||| ||||||||||  ||| |||||||| |||  ||||| || |||||| || || ||||||||||||    
T  9505879 ctcgaattcagctcgtttaaagttcacgaacaactcgattcggctcattatattcaactcattgctcaagtaacataattcaaaag 9505794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 26050169 - 26050104
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaa 127  Q
    |||||| | ||||| |||| |||||||||| ||| ||||||  |||||||||||||||| ||||||    
T  26050169 tttttttaactcgagttcggctcgtttaaagttcgcgaacaactcggttcggctcgttaagttcaa 26050104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 22563320 - 22563428
Alignment:
Q  21 tttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgtta 120  Q
    |||||||||||||||||||||||||| ||| ||  |||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||||    
T  22563320 tttgctcggctcgaaactcgactcgagttcaacacgaactcttttttcagctcgagttcgactcgtttaaggttcacgaacagttcggttcggttcgtta 22563419  T
Q  121 ggttcaatt 129  Q
    |||||||||    
T  22563420 ggttcaatt 22563428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 11161145 - 11161230
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttc 111  Q
    |||||||||| |||| ||||| |||| |  ||||| |||||||||||||| |||  |||||||||| |||||||||||||||||||    
T  11161145 tcggctcgaacctcggctcgagttcgccacgaactattttttcagctcgagttcagctcgtttaaagttcacgaacagttcggttc 11161230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 23180808 - 23180921
Alignment:
Q  18 gaatttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcg 117  Q
    ||||||| |||| ||||| ||||  |||| || |||  ||||| |||||||| ||| | ||||||||||||||| || |||||||||| ||||||||||     
T  23180808 gaatttgttcggttcgaacctcggttcgagtttgacaggaacttttttttcatctcaagttcgactcgtttaaagtttacgaacagtttggttcggctca 23180907  T
Q  118 ttaggttcaattcg 131  Q
    ||||||||| ||||    
T  23180908 ttaggttcatttcg 23180921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 33280678 - 33280606
Alignment:
Q  61 cttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    ||||||||||||| | |||||||| |||||| |||||||||| || |||||||||| ||||||||| ||||||    
T  33280678 cttttttcagctcaagttcgactcatttaaagttcacgaacaatttggttcggctcattaggttcagttcgtt 33280606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 43966949 - 43967049
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||||||||| ||| |   ||| | ||||||  |||||| |||| |||||||||| ||||||| ||  |||||||||||||||||||||    
T  43966949 tcggctcgaaactcgactcgagttcaaaacgaatttttttttgggctcgagttcggctcgtttaaagttcacgagcaactcggttcggctcgttaggttc 43967048  T
Q  126 a 126  Q
    |    
T  43967049 a 43967049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 1091164 - 1091236
Alignment:
Q  43 tcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctc 116  Q
    |||| ||||||  |||||||||||| || | || ||||||||||||||| |||||||||||||| |||||||||    
T  1091164 tcgagttcgacacgaactctttttt-agtttgagttcgactcgtttaaagttcacgaacagttcagttcggctc 1091236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 453061 - 453110
Alignment:
Q  82 ctcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    |||||||||| ||||||||||||| ||||||| || ||||||||| ||||    
T  453061 ctcgtttaaagttcacgaacagtttggttcggttcattaggttcagttcg 453110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 22930922 - 22930858
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaa 91  Q
    ||||||||||||||| ||||| ||||||   |||| |||||||||||||| ||| |||||||||||    
T  22930922 tcggctcgaaactcggctcgagttcgacacaaactattttttcagctcgagttc-actcgtttaaa 22930858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 6e-34; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 6998659 - 6998744
Alignment:
Q  71 ctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgttgctcgagaaatataattcaaaag 156  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6998659 ctcgagttcgactcgtttaaagttcacgaacagttcggttcggctcgttaggttcaattcgttgctcgagtaatataattcaaaag 6998744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 472885 - 473023
Alignment:
Q  18 gaatttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcg 117  Q
    |||||||||| | | |||||||||||| | ||||||  |||||||||||||||||||| ||||||||||||||| ||||||||||||| | ||| |||||    
T  472885 gaatttgctcagtttgaaactcgactcaagttcgacacgaactcttttttcagctcgagttcgactcgtttaaagttcacgaacagtttgattcagctcg 472984  T
Q  118 ttaggttcaattcgttgctcgagaaatataattcaaaag 156  Q
    ||| |||||| |||||||| ||  |||||||||||||||    
T  472985 ttaagttcaactcgttgcttgattaatataattcaaaag 473023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 10346279 - 10346384
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||||| ||||||  ||||| |||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||    
T  10346279 tcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggttc 10346378  T
Q  126 aattcg 131  Q
    | ||||    
T  10346379 agttcg 10346384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 25181246 - 25181134
Alignment:
Q  18 gaatttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcg 117  Q
    |||||||||| |||||||||||  || || ||||||  |||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  25181246 gaatttgctcagctcgaaactcagcttgagttcgacacgaactcttttttaagctcgagttcgactcgtttaaaattcacaaacagttcgattcggctcg 25181147  T
Q  118 ttaggttcaattc 130  Q
    |||| ||||||||    
T  25181146 ttagtttcaattc 25181134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 18961912 - 18962012
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||||| ||||||   |||| |||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  18961912 tcggctcgaaactcggctcgagttcgacacaaactattttttcagcccgagttcgactcgtttaaagttcacgaacagttcggttcggctcgctaggttc 18962011  T
Q  126 a 126  Q
    |    
T  18962012 a 18962012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 7957121 - 7957228
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||||| ||| ||  ||||| |||||||||||||| |||  |||||||||| ||||||||||||||||||||||||||||||||     
T  7957121 tcggctcgaaactcggctcgagttcaacacgaactattttttcagctcgagttcagctcgtttaaagttcacgaacagttcggttcggctcgttaggttt 7957220  T
Q  126 aattcgtt 133  Q
    | ||||||    
T  7957221 agttcgtt 7957228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 10962465 - 10962388
Alignment:
Q  56 gaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    ||||| |||||||||||  | |||| |||||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  10962465 gaacttttttttcagcttaagttcggctcgtttaaagttcacgaacagtttggttcggctcattaggttcaattcgtt 10962388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 12428110 - 12428211
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||||||||| |||||   ||||| ||| || ||||||| ||||||||||||||| || ||||||||||||  ||| ||| ||||||||    
T  12428110 tcggctcgaaactcgactcgagttcgatacgaactttttgttaagctcgagttcgactcgtttaaagtttacgaacagttcgactcgactcattaggttc 12428209  T
Q  126 aa 127  Q
    ||    
T  12428210 aa 12428211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 27925486 - 27925562
Alignment:
Q  55 agaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    |||||| |||||||| ||| | |||| |||||||||||||||||||||||| |||||||||| ||||||||| ||||    
T  27925486 agaacttttttttcatctcaagttcggctcgtttaaaattcacgaacagtttggttcggctcattaggttcatttcg 27925562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 4442046 - 4441968
Alignment:
Q  77 ttcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgttgctcgagaaatataattcaaaa 155  Q
    ||||||||||||||| | ||||||||  |||||||||||||||| |||||| ||||||||| |  || |||||||||||    
T  4442046 ttcgactcgtttaaagtgcacgaacaactcggttcggctcgttaagttcaactcgttgctcaaataacataattcaaaa 4441968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 3082402 - 3082297
Alignment:
Q  28 ggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaa 127  Q
    |||||||||||||||| || |||||   ||||  |||||||| ||||| |||||||||||| || ||||||| ||  || ||||| ||||||||||||||    
T  3082402 ggctcgaaactcgactagagttcgaaacgaacctttttttcaactcgagttcgactcgttttaagttcacgagcaactcagttcgactcgttaggttcaa 3082303  T
Q  128 ttcgtt 133  Q
     |||||    
T  3082302 ctcgtt 3082297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 22295423 - 22295523
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||||||||| |||||    |||| ||||| | |||||| |||| ||| |||||||||||||| ||  ||||||| ||||||||| |||    
T  22295423 tcggctcgaaactcgactcgagttcgaaacaaactttttttccggctcgagttcggctcatttaaaattcacgagcaactcggttcagctcgttagattc 22295522  T
Q  126 a 126  Q
    |    
T  22295523 a 22295523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 7436767 - 7436873
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    |||||||||||||| |||||| || ||   |||| ||||||||| ||||| |||| |||||||||| ||||||| ||  | ||||| |||||||||||||    
T  7436767 tcggctcgaaactccactcgagtttgaaacgaac-cttttttcaactcgagttcggctcgtttaaagttcacgagcaacttggttcagctcgttaggttc 7436865  T
Q  126 aattcgtt 133  Q
    || |||||    
T  7436866 aactcgtt 7436873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 6998635 - 6998671
Alignment:
Q  18 gaatttgctcggctcgaaactcgactcgaattcgact 54  Q
    ||||||||||||||||||||||||||||| |||||||    
T  6998635 gaatttgctcggctcgaaactcgactcgagttcgact 6998671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 17493370 - 17493302
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattc 130  Q
    |||||||||||| | |||| ||| |||||| |||||| | |||| ||||| |||| |||||||||||||    
T  17493370 ttttttcagctcaagttcggctcatttaaagttcacggatagtttggttcagctcattaggttcaattc 17493302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 33109899 - 33109999
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||||||||| ||| |   ||||  ||||||  |||||| |||| |||||||||| |||| || ||  ||| || ||||||||||||||    
T  33109899 tcggctcgaaactcgactcgagttcaaaacgaacctttttttgggctcgagttcggctcgtttaaagttcatgagcaactcgatttggctcgttaggttc 33109998  T
Q  126 a 126  Q
    |    
T  33109999 a 33109999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 1224626 - 1224731
Alignment:
Q  21 tttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgtta 120  Q
    |||||||| ||||||||||||||||| ||||||  ||||||||| ||| |||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  1224626 tttgctcgactcgaaactcgactcgagttcgacacgaactctttattccgctcgagttcgactcgtttaaggttcacgaacagttcggttcggctcgtta 1224725  T
Q  121 ggttca 126  Q
    ||||||    
T  1224726 ggttca 1224731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 27905547 - 27905652
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||| ||||||||| ||||| ||||||  ||||| |||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  27905547 tcggcacgaaactcggctcgagttcgacacgaactattttttcagcccgaattcggctcgtttaaagttcacgaacagttcggttcggctcgttaggttc 27905646  T
Q  126 aattcg 131  Q
    | ||||    
T  27905647 agttcg 27905652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 18879687 - 18879792
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||| | ||||| ||||||  ||||| |||||||||||||| |||| ||| |||||| |||||||||||||||||||||||||||||||||    
T  18879687 tcggctcgaaacttggctcgagttcgacacgaactattttttcagctcgagttcggctcatttaaagttcacgaacagttcggttcggctcgttaggttc 18879786  T
Q  126 aattcg 131  Q
    | ||||    
T  18879787 agttcg 18879792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 5385169 - 5385062
Alignment:
Q  19 aatttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgt 118  Q
    |||||| ||||||||||||| ||||||| ||| ||  |||||||||||| ||||||| ||||||||||||||| |||||||||| ||||||||||||| |    
T  5385169 aatttgttcggctcgaaacttgactcgagttcaacacgaactctttttttagctcgagttcgactcgtttaaagttcacgaacaattcggttcggctcat 5385070  T
Q  119 taggttca 126  Q
    ||| ||||    
T  5385069 tagattca 5385062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 32157458 - 32157351
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||| | ||||| ||||||  ||||| |||||||||||||| |||| |||||||||| ||||||| ||||||||||||||||||||| |||    
T  32157458 tcggctcgaaacttggctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaccagttcggttcggctcgttagattc 32157359  T
Q  126 aattcgtt 133  Q
    | ||||||    
T  32157358 agttcgtt 32157351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 22921509 - 22921603
Alignment:
Q  37 ctcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    |||| ||||||||||||  ||||| |||||||| ||||| |||| |||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  22921509 ctcggctcgaattcgacacgaactattttttcatctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggttcagttcg 22921603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 29322134 - 29322223
Alignment:
Q  42 ctcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    ||||| ||||||  ||||| |||||||||||||| |||| |||||||||| ||||||||| |||||||||||||||||||||||| ||||    
T  29322134 ctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaactgttcggttcggctcgttaggttcagttcg 29322223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 39408786 - 39408879
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgtt 119  Q
    ||||||||||||||||||||| |||||   ||||| |||||| ||||||| |||| |||||||||| ||||||||||||||||||| |||||||    
T  39408786 tcggctcgaaactcgactcgagttcgaagcgaacttttttttaagctcgagttcggctcgtttaaagttcacgaacagttcggttcagctcgtt 39408879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 38523313 - 38523225
Alignment:
Q  43 tcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    |||| ||||||  ||||| |||||||||||||| |||| |||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  38523313 tcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagtttggttcggctcgttaggttcagttcg 38523225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 39407048 - 39407141
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgtt 119  Q
    |||| |||||||||||||||| |||||   ||||| |||||| ||||||| |||| |||||||||| ||||||||||||||||||| |||||||    
T  39407048 tcggttcgaaactcgactcgagttcgaagtgaacttttttttaagctcgagttcggctcgtttaaagttcacgaacagttcggttcagctcgtt 39407141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 2675404 - 2675474
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| || ||||||| ||||||||||||||||    
T  2675404 ttttttcagctcgagttcgactcgtttaaagttcacgaacagtttgg-tcggctcattaggttcaattcgtt 2675474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 15932034 - 15932111
Alignment:
Q  56 gaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||||||||||||  ||||| ||||  ||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  15932034 gaactcttttttcgactcgagttcggttcgtttaaagttcacgaacagttcggttcggctcgataggttcagttcgtt 15932111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 26299513 - 26299606
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgtt 119  Q
    ||||||||||||||||||||| |||||   ||||  |||||| | ||||| |||| |||||||||| ||||||||||||||||||| |||||||    
T  26299513 tcggctcgaaactcgactcgagttcgaagtgaacctttttttaaactcgagttcggctcgtttaaagttcacgaacagttcggttcagctcgtt 26299606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 34720136 - 34720043
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgtt 119  Q
    |||| |||||||||||||||| |||||   ||||| |||||| ||||||| |||  |||||||||| ||||||||||||||||||| |||||||    
T  34720136 tcggttcgaaactcgactcgagttcgaagcgaacttttttttaagctcgagttcagctcgtttaaagttcacgaacagttcggttcagctcgtt 34720043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 20191271 - 20191200
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||||||||||| | |||| |||||||||| ||||| ||||||| |||||||||| ||||||||||||||||    
T  20191271 ttttttcagctcaagttcggctcgtttaaagttcacaaacagtttggttcggctcattaggttcaattcgtt 20191200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 27451063 - 27450970
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgtt 119  Q
    |||||||||||||| |||||| |||||   ||||  |||||| | ||||| |||| |||||||||| ||||||||||||||||||| |||||||    
T  27451063 tcggctcgaaactcaactcgagttcgaagcgaacatttttttaaactcgagttcggctcgtttaaagttcacgaacagttcggttcagctcgtt 27450970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 43385868 - 43385973
Alignment:
Q  29 gctcgaaactcgactcgaattcgactagaactctttt-ttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaa 127  Q
    |||||||||||| ||||| ||||||   |||| |||| ||||||| || |||| |||||||||| |||||||| ||||| |||||||||| ||||||||     
T  43385868 gctcgaaactcggctcgagttcgacacaaactttttttttcagcttgagttcggctcgtttaaagttcacgaatagttcagttcggctcgataggttcag 43385967  T
Q  128 ttcgtt 133  Q
    ||||||    
T  43385968 ttcgtt 43385973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 41782761 - 41782861
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||||||||| ||| |   ||||  ||||||  |||||| |||| |||||||||| ||||||| ||  |||||||||||||||||||||    
T  41782761 tcggctcgaaactcgactcgagttcaaaacgaacctttttttgggctcgagttcggctcgtttaaagttcacgagcaactcggttcggctcgttaggttc 41782860  T
Q  126 a 126  Q
    |    
T  41782861 a 41782861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 31620065 - 31620127
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggtt 124  Q
    |||||||| ||| | ||||||||||||||  |||||||||| |||||||||||||||||||||    
T  31620065 ttttttcaactcaagttcgactcgtttaaggttcacgaacaattcggttcggctcgttaggtt 31620127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 1841050 - 1840958
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgtt 119  Q
    ||||||||||||||||||||| |||||   |||| ||||||| | ||||| |||| |||||||||| ||||||||||  || ||||||||||||    
T  1841050 tcggctcgaaactcgactcgagttcgatacgaaccctttttttaactcgagttcggctcgtttaaagttcacgaacaactc-gttcggctcgtt 1840958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 26297972 - 26298065
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgtt 119  Q
    |||||||||||||||| |||| |||||   ||||  |||||| | ||||| |||| |||||||||| |||||||| |||||||||| |||||||    
T  26297972 tcggctcgaaactcgattcgagttcgaagcgaacctttttttaaactcgagttcggctcgtttaaagttcacgaatagttcggttcagctcgtt 26298065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 34724107 - 34724019
Alignment:
Q  31 tcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgtt 119  Q
    |||||||||||||||| |||||   ||||  |||||| ||||||| |||  |||||||| | ||||||||||||||||||| |||||||    
T  34724107 tcgaaactcgactcgagttcgaagcgaacctttttttaagctcgagttcagctcgtttagagttcacgaacagttcggttcagctcgtt 34724019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 10493441 - 10493548
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||||||||| |||||   ||||  |||||||| ||| | |||| |||||||||| ||||||| ||  ||| |||| ||| ||||||||    
T  10493441 tcggctcgaaactcgactcgagttcgaaacgaacctttttttcaactcaagttcggctcgtttaaagttcacgagcaactcgattcgactcattaggttc 10493540  T
Q  126 aattcgtt 133  Q
    || |||||    
T  10493541 aactcgtt 10493548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 19715840 - 19715921
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcgg 108  Q
    ||||||||||||||||||||| |||||   |||| ||||||| | ||||| |||| |||||||||| |||||||| |||||||    
T  19715840 tcggctcgaaactcgactcgagttcgaagcgaac-cttttttaaactcgagttcggctcgtttaaagttcacgaatagttcgg 19715921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 4984031 - 4983938
Alignment:
Q  33 gaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttca 126  Q
    |||||||||||||| ||| |   ||||  ||||||  |||||| |||| |||||||||| ||||||| ||  ||||||||||||||||||||||    
T  4984031 gaaactcgactcgagttcaaaacgaacctttttttgggctcgagttcggctcgtttaaagttcacgagcaactcggttcggctcgttaggttca 4983938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 20188473 - 20188524
Alignment:
Q  82 ctcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||||||||| ||||||||||||| |||||||||| ||| |||| |||||||    
T  20188473 ctcgtttaaagttcacgaacagtttggttcggctcattaagttcgattcgtt 20188524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 3805446 - 3805397
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcga 75  Q
    ||||||||||||||| ||||| ||||||  ||||| ||||||||||||||    
T  3805446 tcggctcgaaactcggctcgagttcgacacgaactattttttcagctcga 3805397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 14501383 - 14501327
Alignment:
Q  70 gctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttca 126  Q
    |||||| |||| |||||||||| ||||||| ||  |||||||||||||||| |||||    
T  14501383 gctcgagttcggctcgtttaaagttcacgagcaactcggttcggctcgttaagttca 14501327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 26217490 - 26217590
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||||||||| ||| |   ||||  ||||||  |||| | |||| |||||||||| |||||||  |  ||||||||| |||||||||||    
T  26217490 tcggctcgaaactcgactcgagttcaaaacgaacctttttttgggctccagttcggctcgtttaaagttcacgagaaactcggttcggttcgttaggttc 26217589  T
Q  126 a 126  Q
    |    
T  26217590 a 26217590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 27195535 - 27195591
Alignment:
Q  71 ctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaa 127  Q
    ||||| |||| |||||||||| ||||||||||| |||||| |  |||||||||||||    
T  27195535 ctcgagttcggctcgtttaaagttcacgaacagctcggtttgattcgttaggttcaa 27195591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 37441886 - 37441788
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggtt 124  Q
    ||||||||||||||| ||||| ||||||  ||||| |||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||    
T  37441886 tcggctcgaaactcggctcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggtt 37441788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 36418587 - 36418692
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||| ||||| ||||||  ||| | |||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||||||    
T  36418587 tcggctcgaaactcggctcgagttcgacacgaattattttttcagctcgagttcggttcgtttaaagttcacgaacagttcggttcggctcgttaggttc 36418686  T
Q  126 aattcg 131  Q
    | ||||    
T  36418687 agttcg 36418692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 32179400 - 32179494
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgtta 120  Q
    ||||||||||||||| || || || |||  ||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  32179400 tcggctcgaaactcggcttgagtttgacacgaactattttttcagctcgagttcggctcgtttaaaattcacgaacagttcggttcggctcgtta 32179494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 24470569 - 24470494
Alignment:
Q  56 gaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    ||||| |||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  24470569 gaactattttttcagctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcgttaggttcagttcg 24470494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 21681687 - 21681595
Alignment:
Q  34 aaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttca 126  Q
    ||||||| ||||| ||||||  ||||| |||||||||||||  ||| |||||||||||||||| ||| |||||||||||||||||||||||||    
T  21681687 aaactcggctcgagttcgacacgaactattttttcagctcgggttcaactcgtttaaaattcatgaatagttcggttcggctcgttaggttca 21681595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 24575367 - 24575473
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||||||||| || ||   ||||| |||||| | ||||| |||| |||||||||| ||||||||||  |||||||||||||||||||||    
T  24575367 tcggctcgaaactcgactcgagtttgaaacgaactttttttttaactcgagttcggctcgtttaaagttcacgaacaactcggttcggctcgttaggttc 24575466  T
Q  126 aattcgt 132  Q
    || ||||    
T  24575467 aactcgt 24575473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 15662374 - 15662464
Alignment:
Q  43 tcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    ||||||| |||  ||||| ||||||||||||   |||| |||||||||| ||||||||||||| |||||| ||| ||||||||||||||||    
T  15662374 tcgaatttgacacgaacttttttttcagctcatgttcggctcgtttaaagttcacgaacagtttggttcgactcattaggttcaattcgtt 15662464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 14579074 - 14578997
Alignment:
Q  56 gaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    ||||| |||||| || || | |||| |||||||||||||||||||||||| |||||| ||| ||||||||||||||||    
T  14579074 gaacttttttttgagttcaagttcggctcgtttaaaattcacgaacagtttggttcgactcattaggttcaattcgtt 14578997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 14770906 - 14770829
Alignment:
Q  56 gaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    ||||| |||||||||| ||| |||| |||||||||| ||||  ||||||| |||||||||||||||||||| ||||||    
T  14770906 gaacttttttttcagcccgagttcggctcgtttaaagttcagaaacagtttggttcggctcgttaggttcatttcgtt 14770829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 156
Target Start/End: Original strand, 31868955 - 31869088
Alignment:
Q  25 ctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttagg-t 123  Q
    |||||||||||||||||||||| |||||    |||  |||||| | ||||  |||| |||||||||| ||||||||||  ||||||||||||||| || |    
T  31868955 ctcggctcgaaactcgactcgagttcgatacaaaccattttttaaactcgggttcggctcgtttaaagttcacgaacatctcggttcggctcgttgggtt 31869054  T
Q  124 tcaattc-gttgctcgagaaatataattcaaaag 156  Q
    |||||||  ||||||||| || ||||||||||||    
T  31869055 tcaattcatttgctcgagtaacataattcaaaag 31869088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 35309107 - 35309176
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    |||||||||||||| |||| ||| |||||| || ||||||||||| ||||||||||||||||||| ||||    
T  35309107 ttttttcagctcgagttcggctcatttaaagtttacgaacagttccgttcggctcgttaggttcagttcg 35309176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 38061627 - 38061570
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgtt 119  Q
    |||||| ||||||| |||| |||||||||||||||||||||||||||||| |||||||    
T  38061627 ttttttaagctcgagttcggctcgtttaaaattcacgaacagttcggttcagctcgtt 38061570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 45654433 - 45654340
Alignment:
Q  33 gaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttca 126  Q
    |||| ||| ||||| ||||||  ||| | |||||||||||||  ||||||||||||||| || | ||| |||||||||||||||||||||||||    
T  45654433 gaaattcggctcgagttcgacacgaattattttttcagctcgggttcgactcgtttaaagtttatgaatagttcggttcggctcgttaggttca 45654340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 43090105 - 43090005
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||||||||| ||| |   ||||  ||||||  |||||| |||| |||||||||| ||||||| ||  |||||||||||||||||||||    
T  43090105 tcggctcgaaactcgactcgagttcaaaacgaacatttttttgggctcgagttcggctcgtttaaagttcacgagcaactcggttcggctcgttaggttc 43090006  T
Q  126 a 126  Q
    |    
T  43090005 a 43090005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 46265630 - 46265574
Alignment:
Q  77 ttcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||| |||||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  46265630 ttcggctcgtttaaagttcacgaacagtttggttcggctcattaggttcaattcgtt 46265574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 42916803 - 42916732
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||||| ||||| | |||| |||| ||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  42916803 tttttttagctcaagttcggctcgcttaaagttcacgaacagtttggttcggctcattaggttcaattcgtt 42916732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 29678177 - 29678080
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggt 123  Q
    ||||||||||||||||||| | |||||   ||||  |||||||| ||||| |||| |||||||||| ||||||| ||  || ||||||||||||||||    
T  29678177 tcggctcgaaactcgactcaagttcgaaacgaacctttttttcatctcgagttcggctcgtttaaagttcacgagcaactctgttcggctcgttaggt 29678080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 35810207 - 35810283
Alignment:
Q  56 gaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    ||||| ||||| |||||| | |||| |||||||||  ||||||||||||| |||||||||| ||||||||||||||||    
T  35810207 gaactttttttccagctcaagttcggctcgtttaag-ttcacgaacagtttggttcggctcattaggttcaattcgtt 35810283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 7595823 - 7595891
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattc 130  Q
    |||||||||||| | |||| |||||||||| |||||| ||| || |||||||||| |||||||||||||    
T  7595823 ttttttcagctcaagttcggctcgtttaaagttcacggacaatttggttcggctcattaggttcaattc 7595891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 13645789 - 13645689
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||||||||||||||||| || ||    |||| ||||| | |||||| |||||||| |||||||||||||| ||  || |||| |||||||||||||    
T  13645789 tcggctcgaaactcgactcgagtttgaaacaaactttttttccggctcgagttcgactcatttaaaattcacgagcaactctgttcagctcgttaggttc 13645690  T
Q  126 a 126  Q
    |    
T  13645689 a 13645689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 48575805 - 48575733
Alignment:
Q  30 ctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaaca 102  Q
    ||||||||||||||| | ||| ||  |||||||||||||||||||| ||| ||||||||||| |||| |||||    
T  48575805 ctcgaaactcgactcaagttcaacacgaactcttttttcagctcgagttcaactcgtttaaagttcatgaaca 48575733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 5205183 - 5205076
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaac-tcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggtt 124  Q
    ||||||||||||||||||||| || ||   |||| | |||||| | ||| | |||||||| |||||| ||| ||||||  ||||||||||||||||||||    
T  5205183 tcggctcgaaactcgactcgagtttgaaacgaacctttttttttacctcaagttcgactcatttaaagttcgcgaacaactcggttcggctcgttaggtt 5205084  T
Q  125 caattcgt 132  Q
    ||| ||||    
T  5205083 caactcgt 5205076  T

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Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 15014107 - 15014178
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||||||| ||||| |||| |||||||||| |||||||||| || |||||||||| |||  |||||||||||    
T  15014107 ttttttcaactcgagttcggctcgtttaaagttcacgaacaatttggttcggctcattatattcaattcgtt 15014178  T

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Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 23916190 - 23916304
Alignment:
Q  18 gaatttgctcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcg 117  Q
    |||||||||||| | ||| ||||  |||| || ||| |||||| ||||| |||||| | |||| |||||||||| | ||||||||||| ||||||| ||     
T  23916190 gaatttgctcggtttgaatctcggttcgagtttgacaagaact-tttttccagctcaagttcggctcgtttaaagtccacgaacagtttggttcggttca 23916288  T
Q  118 ttaggttcaattcgtt 133  Q
    |||| |||||||||||    
T  23916289 ttagattcaattcgtt 23916304  T

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Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 47603470 - 47603424
Alignment:
Q  78 tcgactcgtttaaaattcacgaacagttcggttcggctcgttaggtt 124  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||||||    
T  47603470 tcgactcgtttaaagttcacaaactgttcggttcggctcgttaggtt 47603424  T

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Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 7994816 - 7994919
Alignment:
Q  29 gctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaat 128  Q
    |||||||||||||||||| |||||   |||| ||||||| ||| ||| |||  ||||| |||| || ||||| |||||| |||| ||||||||||||||     
T  7994816 gctcgaaactcgactcgagttcgaaacgaac-ctttttttagcacgagttcagctcgtataaagtttacgaatagttcgattcgactcgttaggttcaac 7994914  T
Q  129 tcgtt 133  Q
    |||||    
T  7994915 tcgtt 7994919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 15257919 - 15257819
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    |||||||||||||||  |||| |||||   ||||  |||||  ||||||| |||| |||||||||| |||||||||   |||||||| ||||||||||||    
T  15257919 tcggctcgaaactcggttcgagttcgaaacgaaccatttttctagctcgagttcggctcgtttaaagttcacgaaccactcggttcgactcgttaggttc 15257820  T
Q  126 a 126  Q
    |    
T  15257819 a 15257819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 28005824 - 28005879
Alignment:
Q  77 ttcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgt 132  Q
    |||| |||||||||| ||| |||||| ||| |||||||||||||||||||| ||||    
T  28005824 ttcggctcgtttaaagttcgcgaacaattcagttcggctcgttaggttcaactcgt 28005879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 42936600 - 42936671
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||||| || |||| |||| |||||||||| ||||||||||||| ||||| | ||  |||||||||||||||    
T  42936600 ttttttaagttcgagttcggctcgtttaaagttcacgaacagtttggttcagttcaataggttcaattcgtt 42936671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 7955716 - 7955816
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttc-agctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggtt 124  Q
    |||||||||||||||  |||| |||||   ||| ||||||||| ||||||| |||| |||||||||| |||||||||   | |||||| |||||||||||    
T  7955716 tcggctcgaaactcggttcgagttcgaaacgaa-tcttttttctagctcgagttcggctcgtttaaagttcacgaaccacttggttcgactcgttaggtt 7955814  T
Q  125 ca 126  Q
    ||    
T  7955815 ca 7955816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 40002417 - 40002494
Alignment:
Q  56 gaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    ||||| ||||| |||||| | ||||||||||||||| |||| ||||| ||  || | |||| ||||||||||||||||    
T  40002417 gaactttttttccagctcaagttcgactcgtttaaagttcatgaacaatttagtgcagctcattaggttcaattcgtt 40002494  T

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Target: scaffold0316 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 18777 - 18882
Alignment:
Q  26 tcggctcgaaactcgactcgaattcgactagaactcttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttc 125  Q
    ||||||| |||||||  |||| ||||||  ||||| |||||||||||||| |||| |||||||||| |||||||||||||||||||||||| ||||||||    
T  18777 tcggctcaaaactcggttcgagttcgacacgaactattttttcagctcgagttcggctcgtttaaagttcacgaacagttcggttcggctcattaggttc 18876  T
Q  126 aattcg 131  Q
    | ||||    
T  18877 agttcg 18882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 7997 - 7926
Alignment:
Q  62 ttttttcagctcgaattcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcgtt 133  Q
    |||||| ||||| | |||| |||| ||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  7997 tttttttagctcaagttcggctcgcttaaagttcacgaacagtttggttcggctcattaggttcaattcgtt 7926  T

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Target: scaffold0658 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0658
Description:

Target: scaffold0658; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 6421 - 6372
Alignment:
Q  82 ctcgtttaaaattcacgaacagttcggttcggctcgttaggttcaattcg 131  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  6421 ctcgtctaaagttcacgaacagttcggttcggctcgttaggttcagttcg 6372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 16614 - 16658
Alignment:
Q  82 ctcgtttaaaattcacgaacagttcggttcggctcgttaggttca 126  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||    
T  16614 ctcgtttaaaattcacgaatagttcagttcggctggttaggttca 16658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 1435 - 1385
Alignment:
Q  77 ttcgactcgtttaaaattcacgaacagttcggttcggctcgttaggttcaa 127  Q
    |||| |||||||||| ||||||||||  | |||||||||||||||||||||    
T  1435 ttcggctcgtttaaagttcacgaacaacttggttcggctcgttaggttcaa 1385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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