View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18521_low_26 (Length: 286)
Name: NF18521_low_26
Description: NF18521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18521_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 31979914 - 31979672
Alignment:
| Q |
1 |
cccttattggcaacaaatggaacctatacagtttcaaacaccacaacaacatcatgttgaagcagcaacaaacacttttcatcctatggttccttgcaat |
100 |
Q |
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| T |
31979914 |
cccttattggcaacaaatggaacctatacagtttcaaacaccacaacaacatcatgttgaagcagcaacaaacacttttcatcctatggttccttgcaat |
31979815 |
T |
|
| Q |
101 |
ggttatgcttctggttttggtgcttcatcttcaactcctcactatgtcttctccaacaatgctgcttcttcttctgcttctcctcagtttgttgatgctt |
200 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
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| T |
31979814 |
ggttatgcttctggttttggtgcttcatcttccactcctcactatgttttctccaacaatgctgcttctgcttctacttctcctcagtttgttgatgctt |
31979715 |
T |
|
| Q |
201 |
ctgaccatgtcaatcttgatctcactcttcacctttgaaaaag |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31979714 |
ctgaccatgtcaatcttgatctcactcttcacctttgaaaaag |
31979672 |
T |
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