View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18521_low_30 (Length: 249)

Name: NF18521_low_30
Description: NF18521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18521_low_30
NF18521_low_30
[»] scaffold0045 (3 HSPs)
scaffold0045 (27-244)||(25927-26145)
scaffold0045 (145-244)||(40638-40737)
scaffold0045 (171-243)||(33172-33244)
[»] scaffold0727 (1 HSPs)
scaffold0727 (66-105)||(835-874)
[»] chr2 (4 HSPs)
chr2 (66-105)||(25926887-25926926)
chr2 (66-104)||(18701551-18701589)
chr2 (66-104)||(41089155-41089193)
chr2 (66-103)||(33641133-33641170)
[»] scaffold0136 (1 HSPs)
scaffold0136 (62-103)||(651-692)
[»] chr4 (4 HSPs)
chr4 (66-103)||(3525887-3525924)
chr4 (66-103)||(21798584-21798621)
chr4 (66-103)||(27579763-27579800)
chr4 (66-103)||(46094259-46094296)
[»] chr3 (4 HSPs)
chr3 (66-103)||(19624029-19624066)
chr3 (62-103)||(25109834-25109875)
chr3 (62-102)||(49523432-49523472)
chr3 (66-103)||(27760290-27760327)
[»] chr1 (7 HSPs)
chr1 (67-101)||(15336873-15336907)
chr1 (66-103)||(5348164-5348201)
chr1 (66-103)||(28410915-28410952)
chr1 (66-103)||(35034314-35034351)
chr1 (66-103)||(42736840-42736877)
chr1 (66-103)||(46136087-46136124)
chr1 (63-103)||(47022085-47022125)
[»] chr8 (2 HSPs)
chr8 (66-103)||(3912499-3912536)
chr8 (66-103)||(27198145-27198182)
[»] chr7 (6 HSPs)
chr7 (66-103)||(3307695-3307732)
chr7 (66-103)||(10688459-10688496)
chr7 (66-103)||(10980615-10980652)
chr7 (66-103)||(13882604-13882641)
chr7 (62-103)||(23371450-23371491)
chr7 (66-103)||(31186669-31186706)
[»] chr6 (3 HSPs)
chr6 (66-103)||(7922318-7922355)
chr6 (66-103)||(31851759-31851796)
chr6 (66-94)||(7054302-7054330)
[»] chr5 (6 HSPs)
chr5 (66-103)||(20577469-20577505)
chr5 (66-103)||(22551766-22551803)
chr5 (66-103)||(31861492-31861529)
chr5 (66-103)||(36993002-36993039)
chr5 (66-103)||(37204999-37205036)
chr5 (66-102)||(16305128-16305164)


Alignment Details
Target: scaffold0045 (Bit Score: 134; Significance: 7e-70; HSPs: 3)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 27 - 244
Target Start/End: Complemental strand, 26145 - 25927
Alignment:
Q  27 caataaattttctaaaaattttacagnnnnnnnnnccataaatgacctatattacagaggataaagacttattaaccttnnnnnnntcatttgacnnnnn 126  Q
    ||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||       |||||||||         
T  26145 caataaattttctaaaaattttacaggaaaaaaaatcataaatgacctatattacagaggataaagacttattaaccttaaaaaaatcatttgacaaaaa 26046  T
Q  127 nn-gaatgggacaagggagtagtaaatttctcaaaaactgcaaccatgtacctttataatcaacttcagtgtcaacttttctgaaagcacaagctgcaat 225  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26045 aaagaatgggacaagggagtagtaaatttctcaaaaactgcaaccatgtacctttataatcaacttcagtgtcaacttttctgaaagcacaagctgcaat 25946  T
Q  226 attggccattcatatcact 244  Q
    ||||||||||| |||||||    
T  25945 attggccattcttatcact 25927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 244
Target Start/End: Complemental strand, 40737 - 40638
Alignment:
Q  145 tagtaaatttctcaaaaactgcaaccatgtacctttataatcaacttcagtgtcaacttttctgaaagcacaagctgcaatattggccattcatatcact 244  Q
    |||||| |||||| ||||||  |||| || |||||||||||| |||||| |  |||||||||||||| || |||  | || ||||||||||| |||||||    
T  40737 tagtaactttctcgaaaactttaaccgtgcacctttataatcgacttcatttacaacttttctgaaaacaaaagacgaaacattggccattcttatcact 40638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 33244 - 33172
Alignment:
Q  171 atgtacctttataatcaacttcagtgtcaacttttctgaaagcacaagctgcaatattggccattcatatcac 243  Q
    |||||||||||||||| |||||| |  || |||| |||||| || |||| |||| ||||||||||| ||||||    
T  33244 atgtacctttataatcgacttcatttgcagctttcctgaaaacaaaagccgcaacattggccattcttatcac 33172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 874 - 835
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacctt 105  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  874 aaatgacctatattacagaggataaagacctattaacctt 835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 25926926 - 25926887
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacctt 105  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  25926926 aaatgacctatattacagaggataaagacctattaacctt 25926887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 18701589 - 18701551
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacct 104  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  18701589 aaatgacctatattacaggggataaagacctattaacct 18701551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 41089193 - 41089155
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacct 104  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  41089193 aaatgacctatattacagaggttaaagacctattaacct 41089155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 33641170 - 33641133
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  33641170 aaatgacctatattacagagggtaaagacctattaacc 33641133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 651 - 692
Alignment:
Q  62 ccataaatgacctatattacagaggataaagacttattaacc 103  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  651 ccataaatgacctatattacagagggtaaagacctattaacc 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 3525887 - 3525924
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  3525887 aaatgacctatattacagagggtaaagacttattaacc 3525924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 21798584 - 21798621
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  21798584 aaatgacctatattacaggggataaagacctattaacc 21798621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 27579763 - 27579800
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  27579763 aaatgacctatattacagagggtaaagacatattaacc 27579800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 46094259 - 46094296
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  46094259 aaatgacctatattacagagggtaaagacctattaacc 46094296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 19624029 - 19624066
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  19624029 aaatgacctatattacagaggataaagacctattaacc 19624066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 25109875 - 25109834
Alignment:
Q  62 ccataaatgacctatattacagaggataaagacttattaacc 103  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  25109875 ccataaatgacctatattacagaagataaagacctattaacc 25109834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 49523472 - 49523432
Alignment:
Q  62 ccataaatgacctatattacagaggataaagacttattaac 102  Q
    |||||| |||||||||||||||||||||||| |||||||||    
T  49523472 ccataagtgacctatattacagaggataaaggcttattaac 49523432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 27760327 - 27760290
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    |||||||||||||||||| || ||||||||||||||||    
T  27760327 aaatgacctatattacagggggtaaagacttattaacc 27760290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000002; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 101
Target Start/End: Original strand, 15336873 - 15336907
Alignment:
Q  67 aatgacctatattacagaggataaagacttattaa 101  Q
    |||||||||||||||||||||||||||| ||||||    
T  15336873 aatgacctatattacagaggataaagacctattaa 15336907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 5348201 - 5348164
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  5348201 aaatgacctatattacagagggtaaagacctattaacc 5348164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 28410952 - 28410915
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  28410952 aaatgacctatattacaggggataaagacctattaacc 28410915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 35034314 - 35034351
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  35034314 aaatgacctatattacaggggataaagacctattaacc 35034351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 42736840 - 42736877
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  42736840 aaatgacctatattacaggggataaagacctattaacc 42736877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 46136124 - 46136087
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    |||||||||||||||||| || ||||||||||||||||    
T  46136124 aaatgacctatattacagggggtaaagacttattaacc 46136087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 47022085 - 47022125
Alignment:
Q  63 cataaatgacctatattacagaggataaagacttattaacc 103  Q
    ||||||||||||||||||||| || ||||||| ||||||||    
T  47022085 cataaatgacctatattacagggggtaaagacctattaacc 47022125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 3912499 - 3912536
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    |||||||||||||||||| || ||||||||||||||||    
T  3912499 aaatgacctatattacagggggtaaagacttattaacc 3912536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 27198182 - 27198145
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  27198182 aaatgacctatattacaggggataaagacctattaacc 27198145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 30; Significance: 0.00000008; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 3307695 - 3307732
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    |||||||||||||||||| || ||||||||||||||||    
T  3307695 aaatgacctatattacagggggtaaagacttattaacc 3307732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 10688496 - 10688459
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  10688496 aaatgacctatattacagagggtaaagacctattaacc 10688459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 10980615 - 10980652
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  10980615 aaatgacctatattacagagggtaaagacctattaacc 10980652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 13882641 - 13882604
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  13882641 aaatgacctatattacagagggtaaagacctattaacc 13882604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 23371491 - 23371450
Alignment:
Q  62 ccataaatgacctatattacagaggataaagacttattaacc 103  Q
    |||||||||||||||||||||| || ||||||| ||||||||    
T  23371491 ccataaatgacctatattacagggggtaaagacctattaacc 23371450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 31186706 - 31186669
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  31186706 aaatgacctatattacagagggtaaagacctattaacc 31186669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 30; Significance: 0.00000008; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 7922355 - 7922318
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  7922355 aaatgacctatattacaggggataaagacctattaacc 7922318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 31851796 - 31851759
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  31851796 aaatgacctatattacaggggataaagacctattaacc 31851759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 94
Target Start/End: Original strand, 7054302 - 7054330
Alignment:
Q  66 aaatgacctatattacagaggataaagac 94  Q
    |||||||||||||||||||||||||||||    
T  7054302 aaatgacctatattacagaggataaagac 7054330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 30; Significance: 0.00000008; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 20577505 - 20577469
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  20577505 aaatgacctatattacagagg-taaagacttattaacc 20577469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 22551766 - 22551803
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  22551766 aaatgacatatattacagagggtaaagacttattaacc 22551803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 31861529 - 31861492
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  31861529 aaatgacctatattacaggggataaagacctattaacc 31861492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 36993002 - 36993039
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  36993002 aaatgacctatattacagagggtaaagacctattaacc 36993039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 37204999 - 37205036
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaacc 103  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  37204999 aaatgacctatattacagagggtaaagacatattaacc 37205036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 16305128 - 16305164
Alignment:
Q  66 aaatgacctatattacagaggataaagacttattaac 102  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  16305128 aaatgacctatattacagagggtaaagacctattaac 16305164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University