View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18522_high_45 (Length: 245)
Name: NF18522_high_45
Description: NF18522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18522_high_45 |
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Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 46872937 - 46873149
Alignment:
| Q |
19 |
caatttccattgattcttccattttctccacacccgaaaacagttctgacggtgtaatagcgccgtctactcctgttatcaagtcaagtgctaaatcaaa |
118 |
Q |
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| T |
46872937 |
caatttccattgattcttccattttctccacacccgaaaacagttctgacggtgtaatagcgccgtctactcctgttatcaagtcaagtgctaaatcaaa |
46873036 |
T |
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| Q |
119 |
tcatgttgttcagagaattgaaagaaagaaaaagggtgaaaagaggtgtttttactctggtttaggtttattgaagatgatgatggttttgggggttctt |
218 |
Q |
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| T |
46873037 |
tcatgttgttcagagaattgaaagaaagaaaaagggtgaaaagaggtgtttttactctggtttaggtttattgaagatgatgatggttttgggggttctt |
46873136 |
T |
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| Q |
219 |
ttgtttgctgatg |
231 |
Q |
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| T |
46873137 |
ttgtttgctgatg |
46873149 |
T |
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