View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18522_low_14 (Length: 412)

Name: NF18522_low_14
Description: NF18522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18522_low_14
NF18522_low_14
[»] chr8 (48 HSPs)
chr8 (18-311)||(44904017-44904310)
chr8 (19-311)||(44897911-44898220)
chr8 (317-394)||(22221388-22221466)
chr8 (317-394)||(22227730-22227808)
chr8 (314-394)||(5513978-5514058)
chr8 (313-395)||(10007786-10007869)
chr8 (318-398)||(10006344-10006425)
chr8 (318-398)||(22220388-22220469)
chr8 (319-398)||(18979140-18979220)
chr8 (309-393)||(24122874-24122958)
chr8 (317-397)||(32207346-32207425)
chr8 (327-398)||(18978029-18978100)
chr8 (317-398)||(12353381-12353461)
chr8 (327-394)||(18970920-18970987)
chr8 (317-394)||(12351920-12351998)
chr8 (321-391)||(29968364-29968434)
chr8 (323-398)||(1824098-1824174)
chr8 (323-398)||(1858543-1858619)
chr8 (317-392)||(1823551-1823627)
chr8 (317-392)||(1857996-1858072)
chr8 (316-399)||(32968454-32968538)
chr8 (267-311)||(44905747-44905791)
chr8 (267-311)||(44948218-44948262)
chr8 (317-394)||(5003121-5003198)
chr8 (321-398)||(11287779-11287857)
chr8 (318-399)||(32973955-32974037)
chr8 (317-398)||(38980064-38980146)
chr8 (317-398)||(39011161-39011243)
chr8 (317-398)||(8388463-8388543)
chr8 (318-383)||(23170034-23170098)
chr8 (318-398)||(38974795-38974876)
chr8 (318-398)||(39005893-39005974)
chr8 (318-393)||(30336526-30336602)
chr8 (335-394)||(24488703-24488762)
chr8 (318-374)||(24483143-24483200)
chr8 (317-397)||(45114537-45114618)
chr8 (316-394)||(5514294-5514372)
chr8 (315-364)||(11288914-11288964)
chr8 (316-373)||(11456636-11456694)
chr8 (317-398)||(43661843-43661925)
chr8 (317-393)||(30335638-30335715)
chr8 (316-393)||(8389714-8389792)
chr8 (318-395)||(11283232-11283310)
chr8 (316-393)||(24123923-24123998)
chr8 (320-393)||(29043400-29043474)
chr8 (316-394)||(30568885-30568963)
chr8 (318-383)||(36249552-36249618)
chr8 (318-370)||(3819489-3819541)
[»] chr5 (32 HSPs)
chr5 (317-398)||(19752911-19752992)
chr5 (316-398)||(16650875-16650958)
chr5 (318-394)||(25056405-25056482)
chr5 (316-398)||(18486922-18487005)
chr5 (316-394)||(25523067-25523146)
chr5 (316-398)||(28538674-28538757)
chr5 (317-395)||(36486511-36486590)
chr5 (315-398)||(19754150-19754235)
chr5 (321-395)||(28539843-28539917)
chr5 (318-394)||(22940646-22940723)
chr5 (314-398)||(25055408-25055493)
chr5 (316-392)||(5777899-5777974)
chr5 (315-394)||(33160310-33160390)
chr5 (307-392)||(5778862-5778948)
chr5 (317-394)||(33158097-33158175)
chr5 (318-398)||(20214196-20214276)
chr5 (315-398)||(40255692-40255776)
chr5 (317-395)||(18485137-18485216)
chr5 (318-394)||(1796054-1796131)
chr5 (315-397)||(25524148-25524232)
chr5 (316-403)||(5730439-5730528)
chr5 (315-394)||(18154491-18154570)
chr5 (316-398)||(20216783-20216866)
chr5 (321-399)||(24332916-24332995)
chr5 (320-398)||(36485302-36485381)
chr5 (308-394)||(21835031-21835117)
chr5 (321-395)||(42195137-42195210)
chr5 (335-398)||(7311608-7311671)
chr5 (338-391)||(34893686-34893739)
chr5 (311-374)||(15204287-15204350)
chr5 (336-393)||(2685763-2685820)
chr5 (321-393)||(2186774-2186846)
[»] chr1 (47 HSPs)
chr1 (314-394)||(14999281-14999361)
chr1 (318-398)||(39699787-39699867)
chr1 (316-398)||(24422798-24422881)
chr1 (317-395)||(52274967-52275046)
chr1 (309-394)||(35594208-35594293)
chr1 (310-394)||(45149995-45150079)
chr1 (317-401)||(45157226-45157310)
chr1 (316-399)||(43058784-43058867)
chr1 (318-398)||(51684366-51684447)
chr1 (318-399)||(39222492-39222575)
chr1 (317-392)||(52827346-52827422)
chr1 (316-398)||(11437219-11437302)
chr1 (317-398)||(11436041-11436123)
chr1 (315-393)||(50680329-50680407)
chr1 (321-393)||(24426100-24426173)
chr1 (316-395)||(23980489-23980569)
chr1 (315-394)||(7674525-7674603)
chr1 (317-394)||(33088641-33088719)
chr1 (318-392)||(41364829-41364903)
chr1 (316-398)||(35595211-35595296)
chr1 (318-394)||(36613928-36614005)
chr1 (318-394)||(45148581-45148657)
chr1 (315-398)||(35067022-35067106)
chr1 (315-394)||(7983047-7983126)
chr1 (316-394)||(43060030-43060109)
chr1 (316-394)||(51685789-51685868)
chr1 (321-398)||(37526897-37526975)
chr1 (317-397)||(39698562-39698643)
chr1 (321-394)||(43378737-43378810)
chr1 (317-392)||(41366156-41366232)
chr1 (321-399)||(39153135-39153214)
chr1 (313-395)||(50681627-50681710)
chr1 (317-390)||(14999983-15000057)
chr1 (317-398)||(44404441-44404523)
chr1 (314-398)||(12390001-12390086)
chr1 (313-398)||(25652710-25652795)
chr1 (316-392)||(52828096-52828173)
chr1 (315-394)||(7675483-7675562)
chr1 (313-393)||(16290088-16290170)
chr1 (331-394)||(39151945-39152008)
chr1 (318-370)||(33739094-33739146)
chr1 (318-393)||(33088068-33088143)
chr1 (316-386)||(52276195-52276266)
chr1 (317-365)||(36612852-36612901)
chr1 (317-363)||(39221357-39221405)
chr1 (321-393)||(45156052-45156125)
chr1 (318-398)||(46066525-46066604)
[»] chr4 (46 HSPs)
chr4 (315-394)||(49308051-49308130)
chr4 (312-398)||(17388231-17388317)
chr4 (316-394)||(26421646-26421724)
chr4 (314-398)||(17382989-17383073)
chr4 (316-394)||(1835126-1835205)
chr4 (318-398)||(1834119-1834200)
chr4 (320-393)||(19750600-19750673)
chr4 (320-393)||(19789133-19789206)
chr4 (316-398)||(1290218-1290301)
chr4 (317-395)||(31599788-31599867)
chr4 (318-394)||(31601009-31601086)
chr4 (316-392)||(5526152-5526228)
chr4 (317-392)||(5525359-5525434)
chr4 (317-392)||(14868889-14868964)
chr4 (317-392)||(14876970-14877045)
chr4 (321-398)||(8758857-8758935)
chr4 (316-394)||(13509383-13509461)
chr4 (316-392)||(25685848-25685925)
chr4 (316-392)||(48780246-48780323)
chr4 (316-398)||(1963194-1963277)
chr4 (317-399)||(3928877-3928960)
chr4 (316-395)||(8757673-8757752)
chr4 (318-392)||(10471414-10471489)
chr4 (318-392)||(25684934-25685009)
chr4 (321-394)||(12129626-12129700)
chr4 (317-392)||(13386558-13386635)
chr4 (317-377)||(10470545-10470606)
chr4 (306-398)||(52491627-52491720)
chr4 (321-398)||(8155741-8155818)
chr4 (316-392)||(13386012-13386090)
chr4 (316-394)||(21177995-21178073)
chr4 (316-394)||(49306773-49306851)
chr4 (316-398)||(55603551-55603633)
chr4 (317-395)||(3927665-3927744)
chr4 (316-393)||(1289095-1289173)
chr4 (321-398)||(35935553-35935631)
chr4 (311-401)||(37728582-37728672)
chr4 (321-398)||(35934347-35934423)
chr4 (318-394)||(50909697-50909774)
chr4 (316-399)||(10448279-10448363)
chr4 (318-395)||(1964464-1964542)
chr4 (315-393)||(50909270-50909348)
chr4 (317-365)||(48781098-48781147)
chr4 (321-393)||(55602379-55602451)
chr4 (328-394)||(21539095-21539162)
chr4 (318-393)||(10447006-10447083)
[»] chr3 (56 HSPs)
chr3 (315-397)||(7268848-7268930)
chr3 (317-398)||(54540810-54540892)
chr3 (306-398)||(47614173-47614266)
chr3 (311-398)||(29931219-29931307)
chr3 (311-398)||(29980373-29980461)
chr3 (316-398)||(7758400-7758483)
chr3 (316-398)||(7267642-7267724)
chr3 (316-394)||(12700173-12700250)
chr3 (315-401)||(19984846-19984933)
chr3 (308-398)||(22776832-22776923)
chr3 (308-398)||(12703520-12703610)
chr3 (317-398)||(24516459-24516541)
chr3 (314-398)||(28262189-28262273)
chr3 (316-398)||(534497-534580)
chr3 (319-398)||(8456479-8456558)
chr3 (317-394)||(29932723-29932800)
chr3 (317-394)||(29981877-29981954)
chr3 (317-394)||(54539754-54539832)
chr3 (316-393)||(5029708-5029785)
chr3 (316-392)||(47609695-47609772)
chr3 (317-398)||(55192015-55192096)
chr3 (316-388)||(11671371-11671443)
chr3 (309-392)||(47610606-47610690)
chr3 (316-392)||(51470481-51470557)
chr3 (315-392)||(5001197-5001275)
chr3 (314-395)||(51038813-51038895)
chr3 (316-375)||(47615591-47615651)
chr3 (318-398)||(51037536-51037616)
chr3 (310-398)||(18442622-18442712)
chr3 (310-398)||(19487696-19487786)
chr3 (316-399)||(19986089-19986175)
chr3 (318-392)||(51469972-51470047)
chr3 (318-391)||(49216247-49216321)
chr3 (317-393)||(46721245-46721322)
chr3 (318-394)||(52840628-52840705)
chr3 (318-393)||(535807-535883)
chr3 (331-395)||(34019168-34019232)
chr3 (318-393)||(46719941-46720017)
chr3 (315-398)||(52276301-52276385)
chr3 (318-398)||(53901408-53901487)
chr3 (318-398)||(18456083-18456165)
chr3 (316-398)||(28263131-28263214)
chr3 (316-398)||(52281567-52281650)
chr3 (308-398)||(53614809-53614900)
chr3 (331-393)||(6170286-6170348)
chr3 (325-371)||(22775783-22775829)
chr3 (317-393)||(52839036-52839113)
chr3 (341-393)||(6249633-6249685)
chr3 (321-395)||(34940210-34940284)
chr3 (321-399)||(54987026-54987103)
chr3 (316-398)||(8875904-8875987)
chr3 (344-393)||(31645000-31645049)
chr3 (318-373)||(8338940-8338996)
chr3 (331-395)||(11670398-11670462)
chr3 (317-373)||(26633360-26633416)
chr3 (321-373)||(34296626-34296678)
[»] chr2 (37 HSPs)
chr2 (309-394)||(36449769-36449855)
chr2 (315-394)||(18797243-18797324)
chr2 (315-398)||(38840513-38840597)
chr2 (318-398)||(18299373-18299454)
chr2 (311-399)||(802610-802698)
chr2 (314-394)||(18300748-18300827)
chr2 (316-395)||(18904365-18904445)
chr2 (317-396)||(22848190-22848270)
chr2 (316-398)||(7899902-7899985)
chr2 (316-398)||(18906007-18906090)
chr2 (316-398)||(36450941-36451023)
chr2 (317-398)||(24475224-24475305)
chr2 (315-398)||(7898688-7898772)
chr2 (316-394)||(18868922-18869001)
chr2 (317-397)||(11257621-11257701)
chr2 (317-393)||(11258836-11258913)
chr2 (318-398)||(41878092-41878175)
chr2 (316-398)||(38839240-38839323)
chr2 (310-383)||(11938823-11938897)
chr2 (317-398)||(22587974-22588055)
chr2 (316-393)||(23869560-23869637)
chr2 (316-393)||(41879237-41879315)
chr2 (337-398)||(32739643-32739704)
chr2 (318-392)||(1034495-1034570)
chr2 (319-398)||(13030293-13030370)
chr2 (321-395)||(8534586-8534660)
chr2 (321-394)||(13567975-13568049)
chr2 (317-375)||(21837298-21837355)
chr2 (313-394)||(24476868-24476948)
chr2 (321-394)||(28617926-28617999)
chr2 (319-370)||(1033212-1033263)
chr2 (316-394)||(16446152-16446231)
chr2 (321-373)||(13830270-13830322)
chr2 (317-395)||(13570580-13570659)
chr2 (345-399)||(810800-810854)
chr2 (312-370)||(21837064-21837121)
chr2 (308-399)||(26545540-26545632)
[»] chr7 (37 HSPs)
chr7 (316-398)||(7501872-7501955)
chr7 (318-398)||(31659622-31659704)
chr7 (317-398)||(7500454-7500535)
chr7 (318-398)||(18371424-18371505)
chr7 (310-392)||(17782579-17782662)
chr7 (323-396)||(14999177-14999249)
chr7 (316-392)||(127335-127411)
chr7 (331-398)||(18372477-18372544)
chr7 (316-398)||(22630472-22630555)
chr7 (316-391)||(34174010-34174085)
chr7 (316-392)||(3227620-3227697)
chr7 (320-392)||(17781663-17781736)
chr7 (316-398)||(42886306-42886389)
chr7 (318-392)||(47525393-47525468)
chr7 (314-395)||(11658375-11658457)
chr7 (319-392)||(3227109-3227182)
chr7 (316-392)||(31949320-31949397)
chr7 (318-394)||(48934927-48935004)
chr7 (309-392)||(31949828-31949912)
chr7 (317-389)||(20163585-20163658)
chr7 (321-392)||(128627-128699)
chr7 (315-394)||(21505413-21505491)
chr7 (325-391)||(47524532-47524599)
chr7 (315-398)||(22629480-22629567)
chr7 (321-398)||(11662571-11662649)
chr7 (317-398)||(47369780-47369862)
chr7 (317-393)||(31661034-31661111)
chr7 (316-399)||(597303-597383)
chr7 (318-396)||(769413-769492)
chr7 (315-375)||(14998005-14998067)
chr7 (341-396)||(43899470-43899525)
chr7 (316-375)||(46483551-46483610)
chr7 (317-398)||(20636841-20636923)
chr7 (317-398)||(39182157-39182238)
chr7 (317-373)||(27869195-27869252)
chr7 (336-393)||(34351511-34351568)
chr7 (308-399)||(34352805-34352897)
[»] chr6 (29 HSPs)
chr6 (316-394)||(16704521-16704600)
chr6 (321-398)||(1829623-1829701)
chr6 (315-398)||(10784589-10784674)
chr6 (313-393)||(27322093-27322173)
chr6 (315-398)||(7316314-7316398)
chr6 (307-392)||(8822819-8822905)
chr6 (317-377)||(3721611-3721672)
chr6 (316-392)||(3722533-3722610)
chr6 (316-392)||(8659263-8659340)
chr6 (316-392)||(8821871-8821948)
chr6 (313-392)||(34834605-34834685)
chr6 (316-398)||(14822358-14822441)
chr6 (318-394)||(7314880-7314956)
chr6 (321-398)||(26575074-26575150)
chr6 (315-392)||(27318312-27318389)
chr6 (317-392)||(8660230-8660305)
chr6 (316-393)||(6842308-6842386)
chr6 (331-393)||(10785938-10786000)
chr6 (315-394)||(27437825-27437905)
chr6 (316-398)||(17496791-17496878)
chr6 (315-398)||(14823595-14823680)
chr6 (316-388)||(26574617-26574690)
chr6 (319-394)||(12382735-12382811)
chr6 (318-398)||(16703570-16703648)
chr6 (318-396)||(3333149-3333227)
chr6 (308-398)||(30495718-30495807)
chr6 (320-375)||(26717127-26717183)
chr6 (308-393)||(3333051-3333137)
chr6 (341-393)||(26949210-26949259)
[»] scaffold0320 (1 HSPs)
scaffold0320 (316-394)||(19486-19565)
[»] scaffold0302 (2 HSPs)
scaffold0302 (316-398)||(17468-17551)
scaffold0302 (318-398)||(18796-18877)
[»] scaffold0294 (2 HSPs)
scaffold0294 (316-394)||(5462-5541)
scaffold0294 (316-393)||(4440-4518)
[»] scaffold0019 (2 HSPs)
scaffold0019 (318-394)||(60090-60167)
scaffold0019 (319-398)||(61479-61559)
[»] scaffold1303 (1 HSPs)
scaffold1303 (315-394)||(1436-1516)
[»] scaffold0632 (1 HSPs)
scaffold0632 (316-395)||(3331-3410)
[»] scaffold0093 (2 HSPs)
scaffold0093 (319-398)||(2485-2564)
scaffold0093 (319-398)||(7108-7187)
[»] scaffold0283 (1 HSPs)
scaffold0283 (267-311)||(4197-4241)
[»] scaffold0186 (2 HSPs)
scaffold0186 (308-390)||(23071-23152)
scaffold0186 (316-389)||(23919-23993)
[»] scaffold0227 (1 HSPs)
scaffold0227 (318-398)||(139-220)
[»] scaffold0112 (1 HSPs)
scaffold0112 (318-398)||(37148-37228)
[»] scaffold0059 (2 HSPs)
scaffold0059 (319-399)||(4749-4829)
scaffold0059 (337-393)||(3695-3751)
[»] scaffold0045 (1 HSPs)
scaffold0045 (318-393)||(49109-49185)
[»] scaffold0003 (1 HSPs)
scaffold0003 (315-394)||(49457-49537)
[»] scaffold2034 (1 HSPs)
scaffold2034 (318-395)||(233-311)
[»] scaffold0586 (1 HSPs)
scaffold0586 (307-398)||(9046-9137)
[»] scaffold0369 (1 HSPs)
scaffold0369 (308-393)||(13183-13267)
[»] scaffold0049 (1 HSPs)
scaffold0049 (308-394)||(7439-7526)


Alignment Details
Target: chr8 (Bit Score: 290; Significance: 1e-162; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 18 - 311
Target Start/End: Original strand, 44904017 - 44904310
Alignment:
Q  18 agtatcgactctacatgtgaatgttcagagcttaaaaaggttacgaatgaagtgaaccttttctgcaccatctcttagcttttttgcggccattgagggc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44904017 agtatcgactctacatgtgaatgttcagagcttaaaaaggttacgaatgaagtgaaccttttctgcaccatctcttagcttttttgcggccattgagggc 44904116  T
Q  118 aggaacgaatatggtaacattatagcactacggttgtttcgatccttgcattccatacacctggaaagccatcattagcaccttgaattcagaagaatct 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44904117 aggaacgaatatggtaacattatagcactacggttgtttcgatccttgcattccatacacctggaaagccatcattagcaccttgaattcagaagaatct 44904216  T
Q  218 ctgcttgattattttatgagtaatcatcttcacagtagcaccacaatggcattttgtaaggcatgattcaaacctcaacttagttgagttataa 311  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44904217 ctgcttgattattttatgattaatcatcttcacagtagcaccacaatggcattttgtaaggcatgattcaaacctcaacttagttgagttataa 44904310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 19 - 311
Target Start/End: Complemental strand, 44898220 - 44897911
Alignment:
Q  19 gtatcgactctacatgtgaatgttcagagcttaaaaaggttacgaatgaagtgaaccttttctgcaccatctcttagcttttttgcggccattgagggca 118  Q
    |||| ||||||||||||||||||| ||| |||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44898220 gtattgactctacatgtgaatgttaagaacttaaagaggttatgaatgaagtgaaccttttctgcagcatctcttagcttttttgcggccattgagggca 44898121  T
Q  119 ggaacgaatatggtaacattatagcactacggttgtttcgatccttgcattccatacacctggaaagccatcattagcaccttg-aattcagaagaatct 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||    
T  44898120 ggaacgaatatggtaacattatagcactacggttgtttcgatccttgcattccataaacctggaaagccatcattagcacttcgaaattcagaagaatct 44898021  T
Q  218 ctgcttg----------------attattttatgagtaatcatcttcacagtagcaccacaatggcattttgtaaggcatgattcaaacctcaacttagt 301  Q
    |||||||                ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44898020 ctgcttgtagcatataacaacttattattttatgagcaatcatcttcacagtagcaccacaatggcattttgtaaggcatgattcaaacgtcaacttagt 44897921  T
Q  302 tgagttataa 311  Q
    ||||||||||    
T  44897920 tgagttataa 44897911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 317 - 394
Target Start/End: Complemental strand, 22221466 - 22221388
Alignment:
Q  317 aggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  22221466 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttg 22221388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 317 - 394
Target Start/End: Complemental strand, 22227808 - 22227730
Alignment:
Q  317 aggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  22227808 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttg 22227730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 314 - 394
Target Start/End: Original strand, 5513978 - 5514058
Alignment:
Q  314 tataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||| ||||||||||||||||    
T  5513978 tataggctaaagtgcacttttaccccctaactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttg 5514058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 395
Target Start/End: Complemental strand, 10007869 - 10007786
Alignment:
Q  313 ttataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||| |||| ||||||||||    
T  10007869 ttataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttgg 10007786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 10006344 - 10006425
Alignment:
Q  318 ggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||| |||||||||||||    
T  10006344 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccc 10006425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 22220388 - 22220469
Alignment:
Q  318 ggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||| |||||||| |||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  22220388 ggctaaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttggccc 22220469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 398
Target Start/End: Complemental strand, 18979220 - 18979140
Alignment:
Q  319 gctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||| |||||||||| | |||||||||||| |||||||| |||||||||||||||||||||||    
T  18979220 gctaaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaattttggccc 18979140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 24122874 - 24122958
Alignment:
Q  309 taaattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||  ||||||||||||||||||||||| |||||||| ||||||    
T  24122874 taaattttaggctaaagtgcatttttcccccctaactttaaaaaatttgcaattttgaccccctaagtacaaaaactataatttt 24122958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 317 - 397
Target Start/End: Complemental strand, 32207425 - 32207346
Alignment:
Q  317 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggcc 397  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||||||| ||||||||| |||||||||||||||||||    
T  32207425 aggctaaagtgcacttt-cccccctaaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaattttggcc 32207346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 327 - 398
Target Start/End: Original strand, 18978029 - 18978100
Alignment:
Q  327 gcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||    
T  18978029 gcacttttcccccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttggccc 18978100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 317 - 398
Target Start/End: Complemental strand, 12353461 - 12353381
Alignment:
Q  317 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||  ||||||| |||||||||||    
T  12353461 aggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagta-caaaactataattttggccc 12353381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 327 - 394
Target Start/End: Original strand, 18970920 - 18970987
Alignment:
Q  327 gcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||| ||||||||||||||||    
T  18970920 gcacttttcccccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttg 18970987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 317 - 394
Target Start/End: Original strand, 12351920 - 12351998
Alignment:
Q  317 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||| ||| ||||||| |||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  12351920 aggctaaagtgcattttcccccccttaactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaattttg 12351998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 29968434 - 29968364
Alignment:
Q  321 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatt 391  Q
    ||||||||||||||||||| ||||||| |||| |||||||||||| ||||||||||| |||||||||||||    
T  29968434 taaagtgcacttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaatt 29968364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 323 - 398
Target Start/End: Complemental strand, 1824174 - 1824098
Alignment:
Q  323 aagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||||  |||||||||| ||||||||||||||||||||    
T  1824174 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccc 1824098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 323 - 398
Target Start/End: Complemental strand, 1858619 - 1858543
Alignment:
Q  323 aagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||||  |||||||||| ||||||||||||||||||||    
T  1858619 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccc 1858543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 1823551 - 1823627
Alignment:
Q  317 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    ||||||||||| |||||| |||||| |||||| |||| |||||||||||||||| ||||||| ||||||||||||||    
T  1823551 aggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattt 1823627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 1857996 - 1858072
Alignment:
Q  317 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    ||||||||||| |||||| |||||| |||||| |||| |||||||||||||||| ||||||| ||||||||||||||    
T  1857996 aggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattt 1858072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 316 - 399
Target Start/End: Original strand, 32968454 - 32968538
Alignment:
Q  316 taggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 399  Q
    ||||||||||||||||||||||| ||||||||||||||  |||| |||||| ||||| | |||| ||||| ||||||||||||||    
T  32968454 taggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccct 32968538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 311
Target Start/End: Original strand, 44905747 - 44905791
Alignment:
Q  267 cattttgtaaggcatgattcaaacctcaacttagttgagttataa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  44905747 cattttgtaaggcatgattcaaacctcaacttagttgagttataa 44905791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 44948262 - 44948218
Alignment:
Q  267 cattttgtaaggcatgattcaaacctcaacttagttgagttataa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  44948262 cattttgtaaggcatgattcaaacctcaacttagttgagttataa 44948218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 394
Target Start/End: Complemental strand, 5003198 - 5003121
Alignment:
Q  317 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagta-taaaaactacaattttg 394  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||||| | |||||||||| ||||||| |||||||||    
T  5003198 aggctaaagcgcacttt-cccccctaactttcaaaatcttgcaattttaaacccctaagtactaaaaaccacaattttg 5003121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 398
Target Start/End: Original strand, 11287779 - 11287857
Alignment:
Q  321 taaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||| | ||||||||||| |||| |||||||||||| ||| ||||||| | ||||||||||||||||||    
T  11287779 taaagtgcactttttcacccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttggccc 11287857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 399
Target Start/End: Complemental strand, 32974037 - 32973955
Alignment:
Q  318 ggctaaagtgcactttt-cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 399  Q
    ||||||||||||||||| ||||||||||||||||||  |||| |||||| ||||| | |||| ||||| ||||||||||||||    
T  32974037 ggctaaagtgcactttttcccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccct 32973955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 398
Target Start/End: Complemental strand, 38980146 - 38980064
Alignment:
Q  317 aggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||||| ||||||||||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  38980146 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccc 38980064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 398
Target Start/End: Complemental strand, 39011243 - 39011161
Alignment:
Q  317 aggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||||| ||||||||||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  39011243 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccc 39011161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 398
Target Start/End: Original strand, 8388463 - 8388543
Alignment:
Q  317 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||| ||||||||||||| ||||  ||||||||||  ||||||| ||| |||||||| |||||||||||    
T  8388463 aggctaaagtgcacttt-cccccctaacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttggccc 8388543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 383
Target Start/End: Complemental strand, 23170098 - 23170034
Alignment:
Q  318 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaa 383  Q
    |||||||||||| ||||||||||||| |||||||| ||||||||||||| |||||||||| |||||    
T  23170098 ggctaaagtgca-ttttcccccctaattttcaaaaacttgcaattttgatcccctaagtacaaaaa 23170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 38974795 - 38974876
Alignment:
Q  318 ggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||| ||||||||||||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  38974795 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccc 38974876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 39005893 - 39005974
Alignment:
Q  318 ggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||| ||||||||||||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  39005893 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccc 39005974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 318 - 393
Target Start/End: Complemental strand, 30336602 - 30336526
Alignment:
Q  318 ggctaaagtgcactt-ttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||||||||| |||||||||||||||||||| |||  ||||||  || |||||||| |||||||||||||||    
T  30336602 ggctaaagtgcacttcttcccccctaactttcaaaaacttataattttagcctcctaagtacaaaaactacaatttt 30336526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 394
Target Start/End: Complemental strand, 24488762 - 24488703
Alignment:
Q  335 cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||||||| |||||||||||| |||||||| ||| ||||| |||||||||    
T  24488762 cccccctaactttcaaaaacttgcaattttggccccctaaatatcaaaacaacaattttg 24488703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 24483143 - 24483200
Alignment:
Q  318 ggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaa 374  Q
    ||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||||    
T  24483143 ggctaaagtgcacttttcccctcctaattttcaaaaacttgcaattttggccccctaa 24483200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 397
Target Start/End: Complemental strand, 45114618 - 45114537
Alignment:
Q  317 aggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggcc 397  Q
    ||||| |||||||||||||| |||||||||||||||| ||||||||||||   | ||| ||| | |||||||||||||||||    
T  45114618 aggctgaagtgcacttttccgcccctaactttcaaaaacttgcaattttggttcactatgtacacaaactacaattttggcc 45114537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 394
Target Start/End: Complemental strand, 5514372 - 5514294
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||||||||  ||||||| ||| |||| |||||||||||  ||  |||| || ||||||||||||||||    
T  5514372 taggctaaagtgcacttttatcccctaattttaaaaaacttgcaattttagccttctaaatacaaaaactacaattttg 5514294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 11288964 - 11288914
Alignment:
Q  315 ataggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaatttt 364  Q
    |||||||||||||||||||| | |||||||||||||||| |||||||||||    
T  11288964 ataggctaaagtgcactttttcacccctaactttcaaaaacttgcaatttt 11288914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 373
Target Start/End: Original strand, 11456636 - 11456694
Alignment:
Q  316 taggctaaagtgcacttttc-ccccctaactttcaaaagcttgcaattttgacccccta 373  Q
    |||||||||||||||||||| |||||||| ||||||||  ||||||||||| |||||||    
T  11456636 taggctaaagtgcacttttctccccctaattttcaaaaatttgcaattttggcccccta 11456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 398
Target Start/End: Complemental strand, 43661925 - 43661843
Alignment:
Q  317 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||| |||||||||||||| |||| |||||||||||  |||||||||| | || ||| ||| |||||||| |||||||||||    
T  43661925 aggctgaagtgcacttttccacccttaactttcaaaaagttgcaattttaatcctctatgtacaaaaactaaaattttggccc 43661843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 393
Target Start/End: Original strand, 30335638 - 30335715
Alignment:
Q  317 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||||||| |||||| |||| |||||| |||| |||||||||||| | | ||||||| ||||| |||||||||    
T  30335638 aggctaaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaatttt 30335715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 393
Target Start/End: Complemental strand, 8389792 - 8389714
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    |||| |||||||||||||||||| || || ||||||||  |||||||||||  ||| || ||| |||||||||||||||    
T  8389792 taggttaaagtgcacttttcccctcttaagtttcaaaaagttgcaattttggtcccttatgtacaaaaactacaatttt 8389714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 395
Target Start/End: Complemental strand, 11283310 - 11283232
Alignment:
Q  318 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    |||||||||||| ||| ||||||| |||||||||||  ||| ||||||  ||||||| |||||||||  ||||||||||    
T  11283310 ggctaaagtgcattttcccccccttaactttcaaaaagttgtaattttagccccctatgtataaaaatgacaattttgg 11283232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 393
Target Start/End: Complemental strand, 24123998 - 24123923
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||||| |||||  ||||| |||||||||||| |||||||||||| || | ||||||  |||| |||||||||    
T  24123998 taggctaaagtacactt--cccccgtaactttcaaaaacttgcaattttggcctcttaagtactaaaattacaatttt 24123923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 29043400 - 29043474
Alignment:
Q  320 ctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||| ||||||||| |||| ||| |||||||  | || |||||||||||||| ||| |||||||||||||||    
T  29043400 ctaaagttcacttttcctcccttaaccttcaaaaagtcgcgattttgaccccctatgtacaaaaactacaatttt 29043474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 394
Target Start/End: Original strand, 30568885 - 30568963
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||||||| |||| |||| ||||||||  || ||||||||| | | || ||| |||||||| |||||||    
T  30568885 taggctaaagtgcactttccccctctaagtttcaaaaagttacaattttgatctcttaggtacaaaaactataattttg 30568963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 383
Target Start/End: Original strand, 36249552 - 36249618
Alignment:
Q  318 ggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaa 383  Q
    ||||||||||||||||||||||| ||| ||||||||  ||||||||||| || |||| | |||||||    
T  36249552 ggctaaagtgcacttttccccccttaagtttcaaaaagttgcaattttggcctcctatgaataaaaa 36249618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 3819489 - 3819541
Alignment:
Q  318 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgacccc 370  Q
    |||||||||||| ||||||||| ||| ||||||||  ||||||||||| ||||    
T  3819489 ggctaaagtgcatttttcccccttaagtttcaaaatgttgcaattttggcccc 3819541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 317 - 398
Target Start/End: Original strand, 19752911 - 19752992
Alignment:
Q  317 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  19752911 aggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccc 19752992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 16650958 - 16650875
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  16650958 taggctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagccc 16650875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 318 - 394
Target Start/End: Complemental strand, 25056482 - 25056405
Alignment:
Q  318 ggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  25056482 ggctaaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttg 25056405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 18487005 - 18486922
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||| ||||||| ||||||||||| |||||||||||| ||||||||||||| |||| |||||||||||||    
T  18487005 taggctaaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggccc 18486922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 316 - 394
Target Start/End: Original strand, 25523067 - 25523146
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||| ||||||||||||||||    
T  25523067 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttg 25523146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 316 - 398
Target Start/End: Original strand, 28538674 - 28538757
Alignment:
Q  316 taggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| |||||| ||||||||||||||| ||||    
T  28538674 taggctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttagccc 28538757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 317 - 395
Target Start/End: Complemental strand, 36486590 - 36486511
Alignment:
Q  317 aggctaaagtgcactttt-cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    ||||| |||||||||||| ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||    
T  36486590 aggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgg 36486511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 315 - 398
Target Start/End: Complemental strand, 19754235 - 19754150
Alignment:
Q  315 ataggctaaagtgcactttt--cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||| ||||  |||||||||||||||||| |||||||||||| |||||||| || ||||||||||||||||||||    
T  19754235 ataggctaaagtgcatttttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttggccc 19754150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 395
Target Start/End: Complemental strand, 28539917 - 28539843
Alignment:
Q  321 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||||||| ||||||| |||||||||||||||||    
T  28539917 taaagtgcatttttcccccctaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttgg 28539843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 318 - 394
Target Start/End: Complemental strand, 22940723 - 22940646
Alignment:
Q  318 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| ||||| ||||||||||    
T  22940723 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaattttg 22940646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 314 - 398
Target Start/End: Original strand, 25055408 - 25055493
Alignment:
Q  314 tataggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||||||| |||||||| ||   ||||||||||||| |||||| ||||||||||||||||||||||||    
T  25055408 tataggctaaagtgcacttttccccctctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaattttggccc 25055493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 316 - 392
Target Start/End: Original strand, 5777899 - 5777974
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||  ||||| |||||||    
T  5777899 taggctaaagtgcacttt-cccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 5777974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 315 - 394
Target Start/End: Complemental strand, 33160390 - 33160310
Alignment:
Q  315 ataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||||||||||||||||| || |||||||| |||||||||||  ||||||||||||| ||||||||||||||    
T  33160390 ataggctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagtatagaaactacaattttg 33160310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 307 - 392
Target Start/End: Complemental strand, 5778948 - 5778862
Alignment:
Q  307 tataaattataggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||  |||||||||||  ||||| |||||||    
T  5778948 tataaattgtaggctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaattt 5778862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 317 - 394
Target Start/End: Original strand, 33158097 - 33158175
Alignment:
Q  317 aggctaaagtgcacttttc-ccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||| ||||  ||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  33158097 aggctaaagtgcatttttttccccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaattttg 33158175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 20214196 - 20214276
Alignment:
Q  318 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||  | | ||| ||| ||||||||||||||||||||    
T  20214196 ggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttggccc 20214276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 315 - 398
Target Start/End: Complemental strand, 40255776 - 40255692
Alignment:
Q  315 ataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||||| || || ||| |||| ||||||||||||||||||||| || | ||||||||||||||||||    
T  40255776 ataggctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaattttggccc 40255692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 395
Target Start/End: Original strand, 18485137 - 18485216
Alignment:
Q  317 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    |||||||||||||||||| |||| |||||||| |||| |||||||||||| |||||||||||| ||||| ||||||||||    
T  18485137 aggctaaagtgcactttttcccctctaactttaaaaaacttgcaattttggccccctaagtatcaaaacaacaattttgg 18485216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 394
Target Start/End: Original strand, 1796054 - 1796131
Alignment:
Q  318 ggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||| |||||| |||||||||||||||| ||||||| |||| || |||||||| ||||||||||||||||    
T  1796054 ggctaaagtgcatttttccacccctaactttcaaaaacttgcaactttggccacctaagtacaaaaactacaattttg 1796131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 397
Target Start/End: Complemental strand, 25524232 - 25524148
Alignment:
Q  315 ataggctaaagtgcacttttcccccc--taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggcc 397  Q
    ||||||||||||||||||||||||||  ||| ||| ||||  ||| ||||||| ||||||||||| |||||||||||||||||||    
T  25524232 ataggctaaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaattttggcc 25524148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 403
Target Start/End: Original strand, 5730439 - 5730528
Alignment:
Q  316 taggctaaagtgcacttttcccccc--taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccctttgc 403  Q
    |||||||||||||||||||||||||  |||||||||||| |||||||||||| |  ||||||||  ||||| ||||||| | ||||||||    
T  5730439 taggctaaagtgcacttttcccccccttaactttcaaaaacttgcaattttggcttcctaagtaccaaaaccacaatttagcccctttgc 5730528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 394
Target Start/End: Original strand, 18154491 - 18154570
Alignment:
Q  315 ataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||| ||||||  ||||| ||||||||||| ||| ||||||||| |||||||||| ||||||||||||||||    
T  18154491 ataggctaaagtgaacttttttccccttaactttcaaaaacttacaattttga-cccctaagtacaaaaactacaattttg 18154570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 20216866 - 20216783
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||| ||||||||||||||||||||| || |||||||| |||||||||||  | |||||  || ||||||||||||||||||||    
T  20216866 taggttaaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaattttggccc 20216783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 399
Target Start/End: Original strand, 24332916 - 24332995
Alignment:
Q  321 taaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 399  Q
    |||||||||||||| |||||| || |||||||| |||||||||||| |||| || ||| |||||||||||||||| ||||    
T  24332916 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccct 24332995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 398
Target Start/End: Original strand, 36485302 - 36485381
Alignment:
Q  320 ctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||| |||||| ||||||||||| |||| ||| ||||||||||| | |||||| |||||||| |||||||||||    
T  36485302 ctaaagtgcatttttccacccctaactttaaaaaacttacaattttgacctcttaagtacaaaaactataattttggccc 36485381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 394
Target Start/End: Original strand, 21835031 - 21835117
Alignment:
Q  308 ataaattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||| || ||||||||||||||||| |||| |||| ||| ||||  |||  |||||||||||||| ||| ||||||||||||||||    
T  21835031 ataaagtaaaggctaaagtgcactttccccctctaagtttgaaaaagttgtgattttgaccccctatgtacaaaaactacaattttg 21835117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 395
Target Start/End: Original strand, 42195137 - 42195210
Alignment:
Q  321 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    ||||||||||||||||||| ||||||| ||||| |||| |||||| ||||||| ||| |||| ||||||||||||    
T  42195137 taaagtgcacttttcccccttaactttaaaaag-ttgcgattttggccccctatgtacaaaatctacaattttgg 42195210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 7311608 - 7311671
Alignment:
Q  335 cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||| |||||||| ||| || || ||||| ||||||||||||||| ||||    
T  7311608 cccccctaactttcaaaaacttgcaatattggcctcccaagtacaaaaactacaattttagccc 7311671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 338 - 391
Target Start/End: Original strand, 34893686 - 34893739
Alignment:
Q  338 ccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatt 391  Q
    ||||||||||||||| |||||||||||| | ||||| ||| |||||||||||||    
T  34893686 ccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaatt 34893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 374
Target Start/End: Complemental strand, 15204350 - 15204287
Alignment:
Q  311 aattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaa 374  Q
    ||||||||||| || |||||||||  |||||||||||| |||  |||| |||||||||||||||    
T  15204350 aattataggcttaattgcacttttgacccctaactttctaaaagttgcgattttgaccccctaa 15204287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 393
Target Start/End: Original strand, 2685763 - 2685820
Alignment:
Q  336 ccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    |||||||| |||||||| |||  |||||||  |||||||||| |||||||||||||||    
T  2685763 ccccctaattttcaaaaacttataattttggtcccctaagtacaaaaactacaatttt 2685820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 2186774 - 2186846
Alignment:
Q  321 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||| |||| |||||||| ||||||||  |||||||||||  |  ||| ||| |||||||||||||||    
T  2186774 taaagtgcattttttccccctaagtttcaaaaagttgcaattttggtcttctatgtacaaaaactacaatttt 2186846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 8e-31; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 314 - 394
Target Start/End: Original strand, 14999281 - 14999361
Alignment:
Q  314 tataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  14999281 tataggctaaagtgtacttttcccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 14999361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 318 - 398
Target Start/End: Complemental strand, 39699867 - 39699787
Alignment:
Q  318 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| | ||||||||||||||||||    
T  39699867 ggctaaagtgcacttttcccccctaactttcaataacttgcaattttgaccccctaagtacagaaactacaattttggccc 39699787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 316 - 398
Target Start/End: Original strand, 24422798 - 24422881
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  24422798 taggctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggccc 24422881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 317 - 395
Target Start/End: Original strand, 52274967 - 52275046
Alignment:
Q  317 aggctaaagtgcactttt-cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  52274967 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgg 52275046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 309 - 394
Target Start/End: Original strand, 35594208 - 35594293
Alignment:
Q  309 taaattataggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  35594208 taaattaaaggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttga-cccctaagtattaaaactacaattttg 35594293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 310 - 394
Target Start/End: Complemental strand, 45150079 - 45149995
Alignment:
Q  310 aaattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||| |||| |||||||||||||||||||||||||||||||| |||||||||||| |||| |||||| |||||| |||||||||    
T  45150079 aaattttaggttaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttg 45149995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 317 - 401
Target Start/End: Complemental strand, 45157310 - 45157226
Alignment:
Q  317 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggcccttt 401  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||||||| ||||||| ||| |||||||||||||||| ||||||    
T  45157310 aggctaaagtgcactttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgacccttt 45157226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 316 - 399
Target Start/End: Original strand, 43058784 - 43058867
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 399  Q
    |||| |||||| ||||||| |||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||| |||||    
T  43058784 taggttaaagtacactttttccccctaactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaattttagccct 43058867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 51684366 - 51684447
Alignment:
Q  318 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||||| |||||| ||||  ||||||||||| ||||||| ||||||||||||||||||||||||    
T  51684366 ggctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttggccc 51684447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 399
Target Start/End: Complemental strand, 39222575 - 39222492
Alignment:
Q  318 ggctaaagtgcacttttcccccct--aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 399  Q
    ||||||||||||||||| ||||||  ||||||||||| |||||||||||| |||||||||||||||||||||||| || |||||    
T  39222575 ggctaaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaatgttagccct 39222492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 52827346 - 52827422
Alignment:
Q  317 aggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||  ||||| |||||||    
T  52827346 aggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 52827422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 11437302 - 11437219
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||| |||||| ||||||||||| ||||||||||||  ||| |||||| ||||||||||||||||||||    
T  11437302 taggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccc 11437219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 317 - 398
Target Start/End: Original strand, 11436041 - 11436123
Alignment:
Q  317 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||| ||   |||||||||||||||||||||||||||    
T  11436041 aggctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttggccc 11436123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 315 - 393
Target Start/End: Original strand, 50680329 - 50680407
Alignment:
Q  315 ataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||| ||||||||| ||||||||| |||||| ||||| |||||||||||| |||||||||||||||||||| ||||||    
T  50680329 ataggttaaagtgcatttttcccccttaacttccaaaaacttgcaattttggccccctaagtataaaaactataatttt 50680407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 24426173 - 24426100
Alignment:
Q  321 taaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||||||| ||||| ||||||||||||| |||||||||||| ||||||||||| |||||||||||||||    
T  24426173 taaagtgcactttcccccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 24426100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 316 - 395
Target Start/End: Complemental strand, 23980569 - 23980489
Alignment:
Q  316 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    |||||||||||||||||||||||| |||||||| |||| |||||||||||| | ||||||||| |||||||| ||||||||    
T  23980569 taggctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataattttgg 23980489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 315 - 394
Target Start/End: Original strand, 7674525 - 7674603
Alignment:
Q  315 ataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||| |||||||||||||||||| |||| ||||||||||||   ||||||||| ||||||||||||||||    
T  7674525 ataggctaaagtgcccttttcccccctaacttttaaaaacttgcaattttg-ggccctaagtacaaaaactacaattttg 7674603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 394
Target Start/End: Complemental strand, 33088719 - 33088641
Alignment:
Q  317 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||||||||||| | ||||| ||||||| ||||||||||||||||  |||||| ||||||||||||||||    
T  33088719 aggctaaagtgcacttttccctctctaacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaattttg 33088641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 41364829 - 41364903
Alignment:
Q  318 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| |||||||| ||  ||||| |||||||    
T  41364829 ggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaattt 41364903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 35595296 - 35595211
Alignment:
Q  316 taggctaaagtgcacttttccccc-ctaactttcaaaagctt-gcaattttgaccccctaagtataaaaact-acaattttggccc 398  Q
    |||||||||||| ||||||||||| |||||||| |||| ||| ||||||||||||||||| ||||||||||| |||||||||||||    
T  35595296 taggctaaagtgtacttttccccctctaactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttggccc 35595211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 394
Target Start/End: Complemental strand, 36614005 - 36613928
Alignment:
Q  318 ggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||| |||||| ||||||||||| |||| |||| ||||||| ||||||||||| ||||||||||||||||    
T  36614005 ggctaaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttg 36613928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 394
Target Start/End: Original strand, 45148581 - 45148657
Alignment:
Q  318 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||||||| ||| || ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  45148581 ggctaaagtgcactttttcccgcttaactttcaaaaacttgcaattttggccccctaagta-aaaaactacaattttg 45148657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 315 - 398
Target Start/End: Complemental strand, 35067106 - 35067022
Alignment:
Q  315 ataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||||||||| || ||||||||  |||| |||||| ||||||| | | ||||||||||||||||||||    
T  35067106 ataggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaattttggccc 35067022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 315 - 394
Target Start/End: Original strand, 7983047 - 7983126
Alignment:
Q  315 ataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||| ||||||||||||||| ||| |||||||||| | |||||||||||| ||||||| |||| ||||| |||||||||    
T  7983047 ataggttaaagtgcacttttctcccgtaactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttg 7983126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 394
Target Start/End: Complemental strand, 43060109 - 43060030
Alignment:
Q  316 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||| ||||| ||||| |||||||||||||  ||| |||||||||||| |||||| ||||||||||||||||    
T  43060109 taggctaaagtgtactttaccccctctaactttcaaaaatttgaaattttgaccccttaagtacaaaaactacaattttg 43060030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 394
Target Start/End: Complemental strand, 51685868 - 51685789
Alignment:
Q  316 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||||||||||||| |||||||||||||  |||| |||||| ||| ||| ||| ||||||||||||||||    
T  51685868 taggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttg 51685789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 37526975 - 37526897
Alignment:
Q  321 taaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||| ||||||||||||| ||||||||||| |||||||||||| | |||||| |||| |||| |||||||||||||    
T  37526975 taaagtgtacttttccccccttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttggccc 37526897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 397
Target Start/End: Original strand, 39698562 - 39698643
Alignment:
Q  317 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggcc 397  Q
    ||||||||||||||||| ||||||| |||||| |||| ||| |||||||| ||||||||||| | |||||| ||||||||||    
T  39698562 aggctaaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtacagaaactataattttggcc 39698643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 394
Target Start/End: Complemental strand, 43378810 - 43378737
Alignment:
Q  321 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||||| | | |||||||||||| ||| ||||||||| |||||||||| ||||| ||||||||||    
T  43378810 taaagtgcacttttctctcttaactttcaaaaacttacaattttgatcccctaagtacaaaaattacaattttg 43378737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 41366232 - 41366156
Alignment:
Q  317 aggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||||||| |||||||||||||| | |||||||||  |||| ||||||| ||||| |||||||    
T  41366232 aggctaaagtgcacttttcccctcctaactttcaaaaacatgcaattttagccccttaagtatcaaaaccacaattt 41366156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 399
Target Start/End: Complemental strand, 39153214 - 39153135
Alignment:
Q  321 taaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 399  Q
    |||||||||||||| |||||| || |||||||| |||||||||||| |||| || ||| |||||||||||||||| ||||    
T  39153214 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccct 39153135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 395
Target Start/End: Complemental strand, 50681710 - 50681627
Alignment:
Q  313 ttataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    |||| ||||||||||||||||||||| || || |||||||| |||||||||||| | | |||| ||||||||||||||| ||||    
T  50681710 ttattggctaaagtgcacttttcccctcttaattttcaaaaacttgcaattttggctctctaactataaaaactacaatattgg 50681627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 15000057 - 14999983
Alignment:
Q  317 aggctaaagtgcacttttccc-ccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaat 390  Q
    |||||||||| ||||||| || |||||||||| |||| ||||||||||||| |||||||||| |||| |||||||    
T  15000057 aggctaaagttcactttttcctccctaacttttaaaaacttgcaattttgatcccctaagtacaaaatctacaat 14999983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 398
Target Start/End: Original strand, 44404441 - 44404523
Alignment:
Q  317 aggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||| ||||||||| ||| | |||||||||||| || ||||||||  ||||||||||| |||||||| |||||||||||    
T  44404441 aggctaaaatgcactttttccctcataactttcaaaaactagcaattttagccccctaagtacaaaaactataattttggccc 44404523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 314 - 398
Target Start/End: Complemental strand, 12390086 - 12390001
Alignment:
Q  314 tataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||| ||||||| ||| |||||||||||  |||| ||||||| |||||| ||| ||||| || |||||||||||    
T  12390086 tataggctaaagtgcatttttccctccttaactttcaaaaagttgcgattttgatcccctatgtacaaaaattataattttggccc 12390001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 398
Target Start/End: Original strand, 25652710 - 25652795
Alignment:
Q  313 ttataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||| ||| ||  |||| |||||||| ||||||||||||| ||| |||||| ||||| || || ||||||||    
T  25652710 ttataggctaaagtgcaccttttccttctaattttcaaaaacttgcaattttgatcccttaagtacaaaaattataaatttggccc 25652795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 392
Target Start/End: Complemental strand, 52828173 - 52828096
Alignment:
Q  316 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||| ||||||||||||||||||| |||| |||||||| |||||||||||| | |||||||||  ||||| |||||||    
T  52828173 taggttaaagtgcacttttccccctctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaattt 52828096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 394
Target Start/End: Complemental strand, 7675562 - 7675483
Alignment:
Q  315 ataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||| ||||| | ||  |||||||||||| |||||||||||| || |||||||| ||||| || |||||||    
T  7675562 ataggctaaagtgtactttccacctttaactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataattttg 7675483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 393
Target Start/End: Original strand, 16290088 - 16290170
Alignment:
Q  313 ttataggctaaagtgcacttttccccc--ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||||||||||| |||| ||||  ||||| |||||||  |||||||||||  ||| || |||||||||||||||||||    
T  16290088 ttataggctaaagtgcattttttccccatctaacgttcaaaaagttgcaattttggtcccttatgtataaaaactacaatttt 16290170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 394
Target Start/End: Original strand, 39151945 - 39152008
Alignment:
Q  331 ttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||| ||| |||||||| |||| ||||||| ||||||| ||| ||||||||||||||||    
T  39151945 ttttcccccttaagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaattttg 39152008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 33739094 - 33739146
Alignment:
Q  318 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgacccc 370  Q
    ||||||| |||| |||| ||| |||||||||||||||||| ||||||||||||    
T  33739094 ggctaaaatgcattttttccctctaactttcaaaagcttgtaattttgacccc 33739146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 318 - 393
Target Start/End: Original strand, 33088068 - 33088143
Alignment:
Q  318 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    |||||||||  ||| ||||  |||||||||||||| |||| |||||| | | ||||| ||||||||||||||||||    
T  33088068 ggctaaagtatactgttccttcctaactttcaaaaacttgtaatttttatctcctaaatataaaaactacaatttt 33088143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 386
Target Start/End: Complemental strand, 52276266 - 52276195
Alignment:
Q  316 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaacta 386  Q
    |||| ||||||||||||| ||||  |||||||||||||  ||| ||||||| ||||||||||| ||||||||    
T  52276266 taggttaaagtgcactttcccccttctaactttcaaaaatttgtaattttggccccctaagtacaaaaacta 52276195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 365
Target Start/End: Original strand, 36612852 - 36612901
Alignment:
Q  317 aggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttg 365  Q
    ||||||||||||| |||||||||| ||||||||||||  |||||||||||    
T  36612852 aggctaaagtgcatttttccccccttaactttcaaaaatttgcaattttg 36612901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 363
Target Start/End: Original strand, 39221357 - 39221405
Alignment:
Q  317 aggctaaagtgcacttttccccc--ctaactttcaaaagcttgcaattt 363  Q
    |||||||| ||||||||||||||  ||||||||||||| ||||||||||    
T  39221357 aggctaaattgcacttttcccccctctaactttcaaaaacttgcaattt 39221405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 45156052 - 45156125
Alignment:
Q  321 taaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    |||||| ||||||||| |||| || |||||||| ||| |||||||||||  ||| ||| |||||||||||||||    
T  45156052 taaagttcacttttcctcccttaagtttcaaaaacttacaattttgaccttctatgtacaaaaactacaatttt 45156125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 46066525 - 46066604
Alignment:
Q  318 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||| |||||||||||||| || ||||||||||||  |||| |||||  |||| || ||| ||||||||||||||| ||||    
T  46066525 ggcttaagtgcacttttcctcc-taactttcaaaaagttgcgattttagccccttatgtacaaaaactacaattttagccc 46066604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 315 - 394
Target Start/End: Complemental strand, 49308130 - 49308051
Alignment:
Q  315 ataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  49308130 ataggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttg 49308051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 312 - 398
Target Start/End: Complemental strand, 17388317 - 17388231
Alignment:
Q  312 attataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||| |||||| | ||||||||||||||||||    
T  17388317 attataggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttggccc 17388231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 316 - 394
Target Start/End: Complemental strand, 26421724 - 26421646
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  26421724 taggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaattttg 26421646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 314 - 398
Target Start/End: Original strand, 17382989 - 17383073
Alignment:
Q  314 tataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||  ||| |||||| ||||||||||||||||||||    
T  17382989 tataggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccc 17383073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 316 - 394
Target Start/End: Complemental strand, 1835205 - 1835126
Alignment:
Q  316 taggctaaagtgcacttttccc-ccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  1835205 taggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttg 1835126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 1834119 - 1834200
Alignment:
Q  318 ggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||| |||||||| |||| ||| |||||||||||||||| ||||||||||||||||||||||||    
T  1834119 ggctaaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggccc 1834200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 320 - 393
Target Start/End: Complemental strand, 19750673 - 19750600
Alignment:
Q  320 ctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    |||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| |||||||||||||||    
T  19750673 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 19750600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 320 - 393
Target Start/End: Original strand, 19789133 - 19789206
Alignment:
Q  320 ctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    |||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| |||||||||||||||    
T  19789133 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 19789206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 1290301 - 1290218
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||||    
T  1290301 taggctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagccc 1290218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 317 - 395
Target Start/End: Original strand, 31599788 - 31599867
Alignment:
Q  317 aggctaaagtgcactttt-cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    ||||| |||||||||||| ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||    
T  31599788 aggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgg 31599867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 318 - 394
Target Start/End: Complemental strand, 31601086 - 31601009
Alignment:
Q  318 ggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||||||| |||| |||||||| |||| |||||||||||||||||||||||| ||||||||||||||||    
T  31601086 ggctaaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 31601009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 316 - 392
Target Start/End: Complemental strand, 5526228 - 5526152
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  5526228 taggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaattt 5526152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 5525359 - 5525434
Alignment:
Q  317 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||  ||||| |||||||    
T  5525359 aggctaaagtacatttttcccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 5525434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 14868889 - 14868964
Alignment:
Q  317 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||||| ||||| |||||||    
T  14868889 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaattt 14868964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 14877045 - 14876970
Alignment:
Q  317 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||||| ||||| |||||||    
T  14877045 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaattt 14876970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 8758935 - 8758857
Alignment:
Q  321 taaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||||| | ||||||||||||||||||    
T  8758935 taaaatgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccc 8758857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 316 - 394
Target Start/End: Complemental strand, 13509461 - 13509383
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||| ||||||||||||||||||| ||||  ||||||||||| ||||| |||||| |||||||||||||||    
T  13509461 taggctaaagtgtacttttcccccctaacttttaaaaaattgcaattttggccccccaagtatgaaaactacaattttg 13509383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 392
Target Start/End: Complemental strand, 25685925 - 25685848
Alignment:
Q  316 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  25685925 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 25685848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 392
Target Start/End: Original strand, 48780246 - 48780323
Alignment:
Q  316 taggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||  ||||| |||||||    
T  48780246 taggctaaagtgcacttttccccccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 48780323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 398
Target Start/End: Original strand, 1963194 - 1963277
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||| || |||| ||| ||||||||||||||| ||||    
T  1963194 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagccc 1963277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 399
Target Start/End: Complemental strand, 3928960 - 3928877
Alignment:
Q  317 aggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 399  Q
    |||||||||||||||||||||||| ||||||||||||  |||| |||||| ||||||| |||| ||||| ||||||||||||||    
T  3928960 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccctatgtatgaaaaccacaattttggccct 3928877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 395
Target Start/End: Original strand, 8757673 - 8757752
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    ||||||||||||||||||| |||| |||||||||||| ||| |||||||  ||||||||||| | |||||||||||||||    
T  8757673 taggctaaagtgcactttttccccttaactttcaaaaacttacaattttagccccctaagtacagaaactacaattttgg 8757752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 10471489 - 10471414
Alignment:
Q  318 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  10471489 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 10471414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 25684934 - 25685009
Alignment:
Q  318 ggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||  ||||| |||||||    
T  25684934 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaattt 25685009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 394
Target Start/End: Original strand, 12129626 - 12129700
Alignment:
Q  321 taaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||||||| || ||||||||||| |||||||||||| |||| |||||| ||||||||||||||||    
T  12129626 taaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttg 12129700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 13386635 - 13386558
Alignment:
Q  317 aggctaaagtgcactttt--cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||| ||||||  ||||| |||||||    
T  13386635 aggctaaagtgcactttttccccccctaactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaattt 13386558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 10470545 - 10470606
Alignment:
Q  317 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagta 377  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  10470545 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagta 10470606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 306 - 398
Target Start/End: Complemental strand, 52491720 - 52491627
Alignment:
Q  306 ttataaattataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||| |||||||||||||||| |||||||| |||| ||||||||||| ||||||||||||  || |||| || | ||||||||||||||||||    
T  52491720 ttatatattataggctaaagtgtacttttccacccttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttggccc 52491627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 398
Target Start/End: Original strand, 8155741 - 8155818
Alignment:
Q  321 taaagtgcacttttcccccctaactttcaaaagcttgcaatttt-gaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| |  |||||||||  ||||||||||||||||||||    
T  8155741 taaagtgcacttttcccc-ctaactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttggccc 8155818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 392
Target Start/End: Original strand, 13386012 - 13386090
Alignment:
Q  316 taggctaaagtgcacttttccccc-ctaactttc-aaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||||||||| ||||||||| |||| |||||||||||| |||||||||||  ||||| |||||||    
T  13386012 taggctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 13386090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 394
Target Start/End: Original strand, 21177995 - 21178073
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||| ||||| ||||||||||||||| ||  |||||||||||| |||||| | | ||||||||||||||||    
T  21177995 taggctaaagtgtactttccccccctaactttcataaagttgcaattttgatcccctatgaacaaaaactacaattttg 21178073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 394
Target Start/End: Original strand, 49306773 - 49306851
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||||||||  |||| ||||||||||| |||||||||||| ||   |||||| ||||||||||||||||    
T  49306773 taggctaaagtgcacttttttcccccaactttcaaaaacttgcaattttggccatttaagtacaaaaactacaattttg 49306851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 55603633 - 55603551
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||| |||||||||||||| |||| |||||||||||| ||||||||||| | |||||  ||| ||||||||| ||||||||||    
T  55603633 taggttaaagtgcactttttccccttaactttcaaaaacttgcaattttaatcccctgtgtacaaaaactactattttggccc 55603551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 395
Target Start/End: Original strand, 3927665 - 3927744
Alignment:
Q  317 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    ||||||||||||||||||||||| |||||||| ||||  |||| |||||| ||||| | |||| ||||||||||||||||    
T  3927665 aggctaaagtgcacttttccccctctaacttttaaaatgttgcgattttggccccccatgtatgaaaactacaattttgg 3927744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 393
Target Start/End: Original strand, 1289095 - 1289173
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    |||| ||||||| ||||||||||||| ||||||||||   ||| |||||||| || |||||||||||||||||||||||    
T  1289095 taggttaaagtgaacttttccccccttaactttcaaatatttgtaattttgatcctctaagtataaaaactacaatttt 1289173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 35935631 - 35935553
Alignment:
Q  321 taaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||| ||||||| |||||| ||||  ||||||||||  ||||||||||| | ||||||||||||||||||    
T  35935631 taaagtgcactttcccccccttaacttttaaaaatttgcaattttagccccctaagtacataaactacaattttggccc 35935553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 401
Target Start/End: Complemental strand, 37728672 - 37728582
Alignment:
Q  311 aattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggcccttt 401  Q
    |||| |||| ||||||||| |||| || ||||||||| ||||  ||||||||||| || |||| ||| |||||||||||||||| ||||||    
T  37728672 aattttaggttaaagtgcattttttcctcctaacttttaaaaagttgcaattttggcctcctatgtacaaaaactacaattttgacccttt 37728582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 398
Target Start/End: Original strand, 35934347 - 35934423
Alignment:
Q  321 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||  |||||||||| | ||| || |||||||||||    
T  35934347 taaagtgcacttttcccc-ctaactttcaaaaacttgtaattttggtcccctaagtaaagaaattataattttggccc 35934423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 394
Target Start/End: Complemental strand, 50909774 - 50909697
Alignment:
Q  318 ggctaaagtgcacttttccc-ccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||||||| || |||||| ||| ||||  |||| |||||||| ||||| ||||||||||||||||||||    
T  50909774 ggctaaagtgcactttttccaccctaagttttaaaaagttgcgattttgactccctatgtataaaaactacaattttg 50909697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 399
Target Start/End: Complemental strand, 10448363 - 10448279
Alignment:
Q  316 taggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 399  Q
    |||||||||||||||||  || ||||||| ||||||||  |||| |||||  ||||||| ||| |||||||||||||||||||||    
T  10448363 taggctaaagtgcacttcccctcccctaagtttcaaaaagttgcgattttagccccctatgtacaaaaactacaattttggccct 10448279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 395
Target Start/End: Complemental strand, 1964542 - 1964464
Alignment:
Q  318 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    ||||||||||||||||||| |||| |||||| ||||  || |||||||| ||||||| | | |||||||||||||||||    
T  1964542 ggctaaagtgcacttttccacccttaacttttaaaaagttacaattttggccccctatgaacaaaaactacaattttgg 1964464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 393
Target Start/End: Original strand, 50909270 - 50909348
Alignment:
Q  315 ataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||||||| | ||||  ||||||| ||| ||||  |||||||||||||| ||||  ||||||||||||||||||    
T  50909270 ataggctaaagtgtatttttttcccctaagttttaaaaagttgcaattttgacctcctatatataaaaactacaatttt 50909348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 365
Target Start/End: Complemental strand, 48781147 - 48781098
Alignment:
Q  317 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttg 365  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  48781147 aggctaaagtgcacttttccccctctaactttcaaaaatttgcaattttg 48781098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 55602379 - 55602451
Alignment:
Q  321 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||| ||||||||  |||||||||||| |||||||||||   || |||  ||||||||||||||||||    
T  55602379 taaagtgcatttttcccctttaactttcaaaaacttgcaattttagtcctctatatataaaaactacaatttt 55602451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 394
Target Start/End: Complemental strand, 21539162 - 21539095
Alignment:
Q  328 cacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||| |||| || ||| |||| |||||||||||| || ||||||| |||||||||||||||||    
T  21539162 cacttttccacccttaatttttaaaaacttgcaattttggcctcctaagtgtaaaaactacaattttg 21539095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 393
Target Start/End: Original strand, 10447006 - 10447083
Alignment:
Q  318 ggctaaagtgcacttttcccc--cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    |||||||||||||||||||||  | ||| ||||||||  ||||||||||  ||||||| ||| |||||| ||||||||    
T  10447006 ggctaaagtgcacttttccccctcttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaatttt 10447083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 315 - 397
Target Start/End: Complemental strand, 7268930 - 7268848
Alignment:
Q  315 ataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggcc 397  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||| || |||||||||| |||||||||||||||||    
T  7268930 ataggttaaagtgcacttttcccccctaactttcaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcc 7268848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 317 - 398
Target Start/End: Complemental strand, 54540892 - 54540810
Alignment:
Q  317 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||    
T  54540892 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttggccc 54540810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 306 - 398
Target Start/End: Original strand, 47614173 - 47614266
Alignment:
Q  306 ttataaattataggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||||||| |||||||||||| |||||||||||| ||||| |||||||||||||    
T  47614173 ttataaattattggctaaagtgcactttttcccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccc 47614266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 29931219 - 29931307
Alignment:
Q  311 aattataggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||  |||||||| || ||||||||||||||||||||    
T  29931219 aattataggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccc 29931307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 29980373 - 29980461
Alignment:
Q  311 aattataggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||  |||||||| || ||||||||||||||||||||    
T  29980373 aattataggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccc 29980461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 316 - 398
Target Start/End: Original strand, 7758400 - 7758483
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||    
T  7758400 taggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttgccc 7758483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 316 - 398
Target Start/End: Original strand, 7267642 - 7267724
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||| | ||||||||||||||||||    
T  7267642 taggttaaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccc 7267724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 316 - 394
Target Start/End: Original strand, 12700173 - 12700250
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  12700173 taggctaaagtgcacttt-cccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttg 12700250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 315 - 401
Target Start/End: Original strand, 19984846 - 19984933
Alignment:
Q  315 ataggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggcccttt 401  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||||||| ||||||| ||| |||||||||||||||| ||||||    
T  19984846 ataggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgacccttt 19984933  T

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Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 308 - 398
Target Start/End: Complemental strand, 22776923 - 22776832
Alignment:
Q  308 ataaattataggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| ||  ||||||||||| ||||||| ||| ||||||||||||||||||||    
T  22776923 ataaaatataggctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggccc 22776832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 398
Target Start/End: Complemental strand, 12703610 - 12703520
Alignment:
Q  308 ataaattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||| || |||||||||||||||||| ||| |||||||||||||  ||| ||||||| ||||||||||| ||||||||||||||||||||    
T  12703610 ataaaataaaggctaaagtgcactttttccctctaactttcaaaaatttgtaattttggccccctaagtacaaaaactacaattttggccc 12703520  T

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Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 317 - 398
Target Start/End: Original strand, 24516459 - 24516541
Alignment:
Q  317 aggctaaagtgcactttt-cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||| ||||||||||||| ||||||||||||| |||| |||||||||||| | ||||||||||||||||||||||||||||||    
T  24516459 aggccaaagtgcactttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttggccc 24516541  T

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Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 398
Target Start/End: Original strand, 28262189 - 28262273
Alignment:
Q  314 tataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||||||||||||||||||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  28262189 tataggctaaagtgcacttttcccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccc 28262273  T

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Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 316 - 398
Target Start/End: Original strand, 534497 - 534580
Alignment:
Q  316 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||| |||| |||||| |||||| ||||||||||||||| |||| ||| ||||||||||||||||||||    
T  534497 taggctaaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaattttggccc 534580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 398
Target Start/End: Original strand, 8456479 - 8456558
Alignment:
Q  319 gctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||| |||||||| |||||||| ||||||||||||  ||||||| || ||||||||||||||||||||    
T  8456479 gctaaagtgcactttttccccctaattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggccc 8456558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 317 - 394
Target Start/End: Complemental strand, 29932800 - 29932723
Alignment:
Q  317 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||  |||||||||| ||||||||||||||||    
T  29932800 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttg-gcccctaagtacaaaaactacaattttg 29932723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 317 - 394
Target Start/End: Complemental strand, 29981954 - 29981877
Alignment:
Q  317 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||  |||||||||| ||||||||||||||||    
T  29981954 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttg-gcccctaagtacaaaaactacaattttg 29981877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 317 - 394
Target Start/End: Original strand, 54539754 - 54539832
Alignment:
Q  317 aggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||||| ||||||||| || ||||||||||||||||    
T  54539754 aggctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaattttg 54539832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 393
Target Start/End: Complemental strand, 5029785 - 5029708
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||| || ||||||||  ||||| ||||||||    
T  5029785 taggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttt 5029708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 392
Target Start/End: Original strand, 47609695 - 47609772
Alignment:
Q  316 taggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||  ||||| |||||||    
T  47609695 taggctaaaatgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 47609772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 317 - 398
Target Start/End: Complemental strand, 55192096 - 55192015
Alignment:
Q  317 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||| | ||| ||||| |||||||||||| |||||||||||| ||| ||||||| ||||||||||||||||||||    
T  55192096 aggctaaagtgtattttccccccttaactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggccc 55192015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 316 - 388
Target Start/End: Complemental strand, 11671443 - 11671371
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactaca 388  Q
    ||||||||||||||||||| || |||||||||||||| |||||||||||  |||||||| |||||||||||||    
T  11671443 taggctaaagtgcactttttccgcctaactttcaaaaacttgcaattttagccccctaaatataaaaactaca 11671371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 392
Target Start/End: Complemental strand, 47610690 - 47610606
Alignment:
Q  309 taaattataggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  47610690 taaaatataggttaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 47610606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 316 - 392
Target Start/End: Complemental strand, 51470557 - 51470481
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||| || ||||||||||  ||||| |||||||    
T  51470557 taggctaaagtgcactcttcccccctaactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaattt 51470481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 315 - 392
Target Start/End: Original strand, 5001197 - 5001275
Alignment:
Q  315 ataggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||||||| |||||| ||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  5001197 ataggctaaagtgcacttttcctcccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 5001275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 395
Target Start/End: Complemental strand, 51038895 - 51038813
Alignment:
Q  314 tataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    ||||||||||||||||||||||| |||| |||||| ||||  ||||||||||||||||||| | | |||||||||||||||||    
T  51038895 tataggctaaagtgcacttttccacccttaacttttaaaaagttgcaattttgaccccctatgaacaaaaactacaattttgg 51038813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 47615651 - 47615591
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaag 375  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  47615651 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaag 47615591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 51037536 - 51037616
Alignment:
Q  318 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||| ||| ||||||||||||  ||||||||||||||| ||| | | ||||||||||||||| ||||    
T  51037536 ggctaaagtgcacttttctcccttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagccc 51037616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 310 - 398
Target Start/End: Original strand, 18442622 - 18442712
Alignment:
Q  310 aaattataggctaaagtgcacttttcccc--cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||| ||||||||||||||||| ||||  ||||||||||||||  |||| |||||| ||||| | |||| |||||||||||||||||||    
T  18442622 aaattaaaggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccc 18442712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 310 - 398
Target Start/End: Original strand, 19487696 - 19487786
Alignment:
Q  310 aaattataggctaaagtgcacttttcccc--cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||| ||||||||||||||||| ||||  ||||||||||||||  |||| |||||| ||||| | |||| |||||||||||||||||||    
T  19487696 aaattaaaggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccc 19487786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 399
Target Start/End: Complemental strand, 19986175 - 19986089
Alignment:
Q  316 taggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccc--cctaagtataaaaactacaattttggccct 399  Q
    ||||||||||||||||||||||| | ||| |||||||| |||||||||||| |||  |||| |||||||||||||||||||| ||||    
T  19986175 taggctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccctcctatgtataaaaactacaattttgaccct 19986089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 51469972 - 51470047
Alignment:
Q  318 ggctaaagtgcacttttccc-ccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||||| |||||| |||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  51469972 ggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 51470047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 391
Target Start/End: Original strand, 49216247 - 49216321
Alignment:
Q  318 ggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatt 391  Q
    ||||||||||||||||||| | ||||| ||||||||  ||||||||||||||||||| ||| |||||||||||||    
T  49216247 ggctaaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaatt 49216321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 393
Target Start/End: Complemental strand, 46721322 - 46721245
Alignment:
Q  317 aggctaaagtgcacttttc-ccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||||||||||||| |||||||||||| ||||  |||| ||||| |||||||| ||| |||||||||||||||    
T  46721322 aggctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaatttt 46721245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 394
Target Start/End: Complemental strand, 52840705 - 52840628
Alignment:
Q  318 ggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||| | |||||| ||| ||||| |||||||||    
T  52840705 ggctaaagtgcccttttcctcccctaactttcaaaaacttgcaattttggctccctaattatcaaaacaacaattttg 52840628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 318 - 393
Target Start/End: Complemental strand, 535883 - 535807
Alignment:
Q  318 ggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||||  ||| ||||||| ||||||| ||||||    
T  535883 ggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggtcccttaagtattaaaactataatttt 535807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 395
Target Start/End: Complemental strand, 34019232 - 34019168
Alignment:
Q  331 ttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    |||| |||| |||||||||||| |||||||||||||||||||| ||| ||| |||||||||||||    
T  34019232 tttttccccttaactttcaaaaacttgcaattttgaccccctaggtacaaacactacaattttgg 34019168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 318 - 393
Target Start/End: Original strand, 46719941 - 46720017
Alignment:
Q  318 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    |||||||||||| ||||||||||| |||||| ||||  |||| |||||| ||||||| |||||||||||||||||||    
T  46719941 ggctaaagtgcatttttccccccttaacttttaaaaagttgcgattttggccccctatgtataaaaactacaatttt 46720017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 398
Target Start/End: Original strand, 52276301 - 52276385
Alignment:
Q  315 ataggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||||||| || |||||||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  52276301 ataggctaaagtgcacttttccccccctatctttcaaaacgttgcgattttggccccccatgtatgaaaacaacaattttggccc 52276385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 318 - 398
Target Start/End: Complemental strand, 53901487 - 53901408
Alignment:
Q  318 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||| ||| ||| ||||  ||||||||||||| || |||||| |||||||||||| |||||||    
T  53901487 ggctaaagtgcacttttccccc-taagtttaaaaaagttgcaattttgactccttaagtacaaaaactacaatgttggccc 53901408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 398
Target Start/End: Complemental strand, 18456165 - 18456083
Alignment:
Q  318 ggctaaagtgcacttttcccccc--taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||||  ||||||||||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  18456165 ggctaaagtgcacttttcccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccc 18456083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 28263214 - 28263131
Alignment:
Q  316 taggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||||||| ||||||| ||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  28263214 taggctaaagtgcacttttccccccctaacttttaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccc 28263131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 52281650 - 52281567
Alignment:
Q  316 taggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||||||| || |||||||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  52281650 taggctaaagtgcacttttccccccctatctttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccc 52281567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 398
Target Start/End: Original strand, 53614809 - 53614900
Alignment:
Q  308 ataaattataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||| |||||||||||||| |||||| |||| ||||||||||| ||| |||||||   || |||  |||||||||||||||||||||||    
T  53614809 ataaattttaggctaaagtgcatttttcctcccttaactttcaaaaacttacaattttagtcctctatatataaaaactacaattttggccc 53614900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 393
Target Start/End: Original strand, 6170286 - 6170348
Alignment:
Q  331 ttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||| ||| |||||||||||| ||||||||||||| ||| |||||| ||||| |||||||||    
T  6170286 ttttcacccataactttcaaaaacttgcaattttgatcccttaagtacaaaaattacaatttt 6170348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 371
Target Start/End: Original strand, 22775783 - 22775829
Alignment:
Q  325 gtgcacttttcccccctaactttcaaaagcttgcaattttgaccccc 371  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||    
T  22775783 gtgcacttttcccccctaactttcaaaaagttgcaattttggccccc 22775829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 393
Target Start/End: Original strand, 52839036 - 52839113
Alignment:
Q  317 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||||||| ||||||||| ||||||| |||||  ||| ||||||||||| |||||||  ||||| ||||||||    
T  52839036 aggctaaagtgcaattttccccctctaacttccaaaaatttgtaattttgaccctctaagtaccaaaacaacaatttt 52839113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 393
Target Start/End: Original strand, 6249633 - 6249685
Alignment:
Q  341 taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    |||||||||||| ||||||||||| | ||| |||||| |||||||||||||||    
T  6249633 taactttcaaaaacttgcaattttaatcccttaagtacaaaaactacaatttt 6249685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 395
Target Start/End: Complemental strand, 34940284 - 34940210
Alignment:
Q  321 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    |||||||||||||| ||| |||| ||| |||| ||||||||||| | | | || ||||||||| |||||||||||    
T  34940284 taaagtgcactttttccctctaatttttaaaaacttgcaattttaatctcttatgtataaaaattacaattttgg 34940210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 399
Target Start/End: Complemental strand, 54987103 - 54987026
Alignment:
Q  321 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 399  Q
    ||||||||||||||||||| ||| ||||||||  |||| |||||   |||||| |||||||||||| ||||||| ||||    
T  54987103 taaagtgcacttttccccc-taagtttcaaaaagttgcgattttagtcccctatgtataaaaactataattttgaccct 54987026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 398
Target Start/End: Original strand, 8875904 - 8875987
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttc--aaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||| ||||| |  |||  ||||||| ||||||||  |||| || ||| ||||||||||||||||||||    
T  8875904 taggctaaagtgcacttttcaccccttaagttcgaaaaagct-gcaattttagccccttatgtacaaaaactacaattttggccc 8875987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 393
Target Start/End: Original strand, 31645000 - 31645049
Alignment:
Q  344 ctttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||| ||| |||||||| ||||||||||  |||||||||||||||    
T  31645000 ctttcaaaaacttacaattttggccccctaagtgcaaaaactacaatttt 31645049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 373
Target Start/End: Original strand, 8338940 - 8338996
Alignment:
Q  318 ggctaaagtgcacttttc-ccccctaactttcaaaagcttgcaattttgacccccta 373  Q
    |||||||||||||||||| |||||||  ||||||||  |||| ||||||||||||||    
T  8338940 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgacccccta 8338996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 395
Target Start/End: Original strand, 11670398 - 11670462
Alignment:
Q  331 ttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    ||||||| | ||| ||||||||  ||||||||||   ||||||||||||||||||| ||||||||    
T  11670398 ttttcccgcttaattttcaaaaatttgcaattttagtcccctaagtataaaaactataattttgg 11670462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 26633360 - 26633416
Alignment:
Q  317 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgacccccta 373  Q
    |||||||| |||||||||| ||||||| ||| ||||  |||| ||||||||||||||    
T  26633360 aggctaaactgcacttttcgcccctaagttttaaaatgttgcgattttgacccccta 26633416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 373
Target Start/End: Complemental strand, 34296678 - 34296626
Alignment:
Q  321 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgacccccta 373  Q
    ||||||||||||||||  ||||| ||||||||  ||||||||| |||||||||    
T  34296678 taaagtgcacttttccttcctaagtttcaaaattttgcaatttcgacccccta 34296626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 309 - 394
Target Start/End: Original strand, 36449769 - 36449855
Alignment:
Q  309 taaattataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  36449769 taaaatataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttg 36449855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 315 - 394
Target Start/End: Original strand, 18797243 - 18797324
Alignment:
Q  315 ataggctaaagtgcacttttcc--cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||    
T  18797243 ataggctaaagtgcacttttccaccccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaattttg 18797324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 398
Target Start/End: Complemental strand, 38840597 - 38840513
Alignment:
Q  315 ataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||| ||||||||||||||| ||||    
T  38840597 ataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccc 38840513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 18299373 - 18299454
Alignment:
Q  318 ggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||| ||| |||||||||||| ||| |||||||| || |||||||||||||||||||||||||||||    
T  18299373 ggctaaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaattttggccc 18299454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 311 - 399
Target Start/End: Complemental strand, 802698 - 802610
Alignment:
Q  311 aattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 399  Q
    ||||| ||||||||||| ||||||||||||||| |||||||| |||||||||||| ||||||  ||| |||||||||||||||| ||||    
T  802698 aattaaaggctaaagtgtacttttcccccctaagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccct 802610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 394
Target Start/End: Complemental strand, 18300827 - 18300748
Alignment:
Q  314 tataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||| |||||| |||||||||||||| ||||||||| || |||||||||||||||||||||||| ||||||||||||||||    
T  18300827 tataagctaaattgcacttttccccc-taactttcataaacttgcaattttgaccccctaagtacaaaaactacaattttg 18300748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 316 - 395
Target Start/End: Original strand, 18904365 - 18904445
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||| |||| |||||| |||||||||||||||||    
T  18904365 taggctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaattttgg 18904445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 317 - 396
Target Start/End: Original strand, 22848190 - 22848270
Alignment:
Q  317 aggctaaagtgcactttt-cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggc 396  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||  ||||||| || ||||||||||||||||||    
T  22848190 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggc 22848270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 7899985 - 7899902
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||  |||||||||| | ||||||||||||| ||||    
T  7899985 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagccc 7899902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 18906090 - 18906007
Alignment:
Q  316 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||  ||||||||||| ||||||||||||||| ||||    
T  18906090 taggctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccc 18906007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 36451023 - 36450941
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||| ||||||||||||||||||| |||||||||||| ||||||||||||  |||||||||| | |||||||||||| |||||    
T  36451023 taggttaaagtgcacttttcccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttcggccc 36450941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 317 - 398
Target Start/End: Original strand, 24475224 - 24475305
Alignment:
Q  317 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||| |||  | |||||||||||||||| |||| ||||||  ||||||||||||||||||||||||||||||||    
T  24475224 aggctaaagtgcgcttccctcccctaactttcaaaaacttgtaatttttgccccctaagtataaaaactacaattttggccc 24475305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 315 - 398
Target Start/End: Original strand, 7898688 - 7898772
Alignment:
Q  315 ataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||| ||||||||||||||| ||||| ||||||||||| |||||||||||  || |||||||||| ||||||||||||||||||    
T  7898688 ataggttaaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttggccc 7898772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 394
Target Start/End: Original strand, 18868922 - 18869001
Alignment:
Q  316 taggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||| |||||||| |||||||||||||||| |||||||||||| || ||||| || ||||||||||||||||    
T  18868922 taggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaattttg 18869001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 317 - 397
Target Start/End: Original strand, 11257621 - 11257701
Alignment:
Q  317 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggcc 397  Q
    |||||||||||||||||| | || ||||||||||||| ||||||||||| | ||| ||||||||||||||||||||||||||    
T  11257621 aggctaaagtgcacttttactcctctaactttcaaaaacttgcaattttaaaccc-taagtataaaaactacaattttggcc 11257701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 317 - 393
Target Start/End: Complemental strand, 11258913 - 11258836
Alignment:
Q  317 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||||||| ||| ||| | ||||||||||||| |||||||||||| ||||||||||| |||||||||||||||    
T  11258913 aggctaaagtgcattttcccctctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 11258836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 41878092 - 41878175
Alignment:
Q  318 ggctaaagtgcacttttcccccctaactttcaaaagct---tgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||| ||||| |||||||||||| ||   |||||||||| ||||||||||| | ||||||||||||||||||    
T  41878092 ggctaaagtgcactttccccccttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaattttggccc 41878175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 398
Target Start/End: Original strand, 38839240 - 38839323
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||| |||| |||||| || |||||||| |||||||||||  |||||||| || ||||||||||||||||||||    
T  38839240 taggctaaagtgcattttttcccccttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaattttggccc 38839323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 383
Target Start/End: Complemental strand, 11938897 - 11938823
Alignment:
Q  310 aaattataggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaa 383  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||  | |||||||| |||||    
T  11938897 aaattttaggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagtacaaaaa 11938823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 398
Target Start/End: Complemental strand, 22588055 - 22587974
Alignment:
Q  317 aggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||| |||||||| | |||||||||||| |||||||||||| |||| || ||| ||||||||||||||||||||    
T  22588055 aggctaaagtgcatttttcccctcataactttcaaaaacttgcaattttggcccc-tatgtacaaaaactacaattttggccc 22587974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 393
Target Start/End: Complemental strand, 23869637 - 23869560
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||||||||||||||| |||| |||||| |||| |||||||||||| |||||||| || |||||||||||||||    
T  23869637 taggctaaagtgcacttttccacccttaactttaaaaa-cttgcaattttggccccctaaatacaaaaactacaatttt 23869560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 393
Target Start/End: Complemental strand, 41879315 - 41879237
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||||| ||||||| |||||| || |||||||| |||||||||||| ||||||||||| | |||||||||||||    
T  41879315 taggctaaagtacactttttcccccttaattttcaaaaacttgcaattttggccccctaagtacataaactacaatttt 41879237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 32739643 - 32739704
Alignment:
Q  337 cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||| |||||||||||| |||| || ||| ||||||||||||||||||||    
T  32739643 cccctaactttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttggccc 32739704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 1034570 - 1034495
Alignment:
Q  318 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||||||||| ||||||||||| | |||||||||| ||||||| |||  ||||| |||||||    
T  1034570 ggctaaagtgcacttttccccccttaactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaattt 1034495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 398
Target Start/End: Original strand, 13030293 - 13030370
Alignment:
Q  319 gctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||| ||||||||||||| |||| |||||||  |||||||||| ||||| ||||||||| ||||    
T  13030293 gctaaagtgcacttttcccc-ctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaatttttgccc 13030370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 395
Target Start/End: Original strand, 8534586 - 8534660
Alignment:
Q  321 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    |||||||| |||||||||| ||| |||||||| ||| ||||||||| ||  |||||||| |||||||||||||||    
T  8534586 taaagtgctcttttcccccttaattttcaaaaacttacaattttgatcctttaagtatagaaactacaattttgg 8534660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 394
Target Start/End: Original strand, 13567975 - 13568049
Alignment:
Q  321 taaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||| ||||||||||  |||| |||||||| |||||||||||| |||||||| || ||||||||||||||||    
T  13567975 taaagtgtacttttccccttctaagtttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttg 13568049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 21837355 - 21837298
Alignment:
Q  317 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaag 375  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||||| |||||||||    
T  21837355 aggctaaagtgcactttttcccc-taactttcaaaaacttgcaattttggccccctaag 21837298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 394
Target Start/End: Complemental strand, 24476948 - 24476868
Alignment:
Q  313 ttataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||| ||||| ||||||||||| ||||| |||||| |||| |||| |||||||  |||||||||| ||||||||||||||||    
T  24476948 ttattggctagagtgcactttttccccc-aacttttaaaaacttgtaattttggtcccctaagtacaaaaactacaattttg 24476868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 394
Target Start/End: Original strand, 28617926 - 28617999
Alignment:
Q  321 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||| || |||| | ||||||||||||||| |||||||||||| ||||| ||||| ||||||| ||||||||    
T  28617926 taaagtacattttttctccctaactttcaaaatcttgcaattttggccccccaagtacaaaaacttcaattttg 28617999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 370
Target Start/End: Original strand, 1033212 - 1033263
Alignment:
Q  319 gctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgacccc 370  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||| ||||    
T  1033212 gctaaagtgtacttttcccccctaacttttaaaaacttgcaattttggcccc 1033263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 394
Target Start/End: Original strand, 16446152 - 16446231
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||| |||||  |||| ||||||||||| ||||||||||| ||| | ||| || ||||||||||||||||    
T  16446152 taggctaaagtgcatttttctacccttaactttcaaaaacttgcaattttaacctcataaatacaaaaactacaattttg 16446231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 373
Target Start/End: Original strand, 13830270 - 13830322
Alignment:
Q  321 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgacccccta 373  Q
    ||||||||||||||||||||||| ||| ||||  |||| ||||||||||||||    
T  13830270 taaagtgcacttttcccccctaagtttgaaaaagttgcgattttgacccccta 13830322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 395
Target Start/End: Complemental strand, 13570659 - 13570580
Alignment:
Q  317 aggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    ||||||||||||| |||||  ||| |||||||||||| |||||||||||   ||| |||||| |||||||| ||||||||    
T  13570659 aggctaaagtgcatttttctacccataactttcaaaaacttgcaattttagtcccttaagtacaaaaactataattttgg 13570580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 810854 - 810800
Alignment:
Q  345 tttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 399  Q
    |||||||| |||||||||||| ||||||  ||| |||||||||||||||| ||||    
T  810854 tttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccct 810800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 370
Target Start/End: Original strand, 21837064 - 21837121
Alignment:
Q  312 attataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgacccc 370  Q
    ||||| ||||||||||||||||| || | |||||||||||| |||||||||||| ||||    
T  21837064 attattggctaaagtgcactttttcctc-taactttcaaaaacttgcaattttggcccc 21837121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 399
Target Start/End: Complemental strand, 26545632 - 26545540
Alignment:
Q  308 ataaattataggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 399  Q
    ||||||| || |||||||||||||||| ||  | | ||||||||||  |||||||||||||||| ||| || ||||| || ||||||| ||||    
T  26545632 ataaattttaagctaaagtgcactttttccttcatgactttcaaaaatttgcaattttgaccccttaaatacaaaaattataattttgaccct 26545540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 7501955 - 7501872
Alignment:
Q  316 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||| |||||||||||||    
T  7501955 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccc 7501872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 31659622 - 31659704
Alignment:
Q  318 ggctaaagtgcactttt--cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||  |||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||    
T  31659622 ggctaaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttggccc 31659704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 317 - 398
Target Start/End: Original strand, 7500454 - 7500535
Alignment:
Q  317 aggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||| || ||||||||| |||| |||||||||||||    
T  7500454 aggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaattttggccc 7500535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 18371424 - 18371505
Alignment:
Q  318 ggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| |||| |||||| ||||||||||||||||||||    
T  18371424 ggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttggccc 18371505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 310 - 392
Target Start/End: Complemental strand, 17782662 - 17782579
Alignment:
Q  310 aaattataggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  17782662 aaattataggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 17782579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 323 - 396
Target Start/End: Complemental strand, 14999249 - 14999177
Alignment:
Q  323 aagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggc 396  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  14999249 aagtgcacttttcccccctaattttcaaaa-cttgcaattttgaccccctaaatacaaaaactacaattttggc 14999177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 316 - 392
Target Start/End: Original strand, 127335 - 127411
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||  ||||| |||||||    
T  127335 taggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaattt 127411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 398
Target Start/End: Complemental strand, 18372544 - 18372477
Alignment:
Q  331 ttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  18372544 ttttcccccctaattttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccc 18372477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 22630555 - 22630472
Alignment:
Q  316 taggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||| || |||||||||||| |||||||||||| |||||||| || ||||||||||||||| ||||    
T  22630555 taggctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagccc 22630472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 316 - 391
Target Start/End: Complemental strand, 34174085 - 34174010
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatt 391  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||  ||||| ||||||    
T  34174085 taggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 34174010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 392
Target Start/End: Complemental strand, 3227697 - 3227620
Alignment:
Q  316 taggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  3227697 taggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 3227620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 392
Target Start/End: Original strand, 17781663 - 17781736
Alignment:
Q  320 ctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||  ||||| |||||||    
T  17781663 ctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 17781736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 42886389 - 42886306
Alignment:
Q  316 taggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||| ||||||||||||||| || ||||||||||||||  |||||||||||||||||||| || ||||||||||||||| ||||    
T  42886389 taggttaaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagccc 42886306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 47525468 - 47525393
Alignment:
Q  318 ggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||  |||||||||||| ||||| |||||||    
T  47525468 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaattt 47525393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 395
Target Start/End: Original strand, 11658375 - 11658457
Alignment:
Q  314 tataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    ||||||||||| |||||||||||||||| ||||||||||| | |||||||||  ||||||| ||| |||||||||||||||||    
T  11658375 tataggctaaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaattttgg 11658457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 3227109 - 3227182
Alignment:
Q  319 gctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  3227109 gctaaagtgcactttccccccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 3227182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 316 - 392
Target Start/End: Original strand, 31949320 - 31949397
Alignment:
Q  316 taggctaaagtgcacttttccc-ccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  31949320 taggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 31949397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 394
Target Start/End: Complemental strand, 48935004 - 48934927
Alignment:
Q  318 ggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||| |||||| |||||||||||||||| |||| ||||||||||| ||||||| |||||||| |||||||    
T  48935004 ggctaaagtgcatttttccacccctaactttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaattttg 48934927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 392
Target Start/End: Complemental strand, 31949912 - 31949828
Alignment:
Q  309 taaattataggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    ||||| ||||||||||||||||| |||||||| |||||||||||| |||||||||||| |||||||| ||  ||||| |||||||    
T  31949912 taaataataggctaaagtgcactcttccccccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaattt 31949828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 389
Target Start/End: Complemental strand, 20163658 - 20163585
Alignment:
Q  317 aggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaa 389  Q
    |||||||||||||||| ||| |||||||||||||||| |||||||||||| | ||||| ||| |||||||||||    
T  20163658 aggctaaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 128699 - 128627
Alignment:
Q  321 taaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    ||||||||||||||||| || ||||||||||||  |||||||||||||||||||||||  ||||| |||||||    
T  128699 taaagtgcacttttcccaccataactttcaaaaatttgcaattttgaccccctaagtaccaaaaccacaattt 128627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 394
Target Start/End: Original strand, 21505413 - 21505491
Alignment:
Q  315 ataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||||||||||||| |||||||||||||  |||| |||||| ||||| |  || ||||||||||||||||    
T  21505413 ataggctaaagtgcacttttcccc-ctaactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttg 21505491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 391
Target Start/End: Original strand, 47524532 - 47524599
Alignment:
Q  325 gtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatt 391  Q
    ||||||||||||||| ||||||||||||| |||||||||||| |||||||||||  ||||| ||||||    
T  47524532 gtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatt 47524599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 398
Target Start/End: Original strand, 22629480 - 22629567
Alignment:
Q  315 ataggctaaagtgcacttttcccccc----taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||| |||||||||     ||| |||||||| |||| ||||||| || |||||||| ||||||||||||||||||||    
T  22629480 ataggctaaagtgcatttttccccctcccttaattttcaaaaacttgtaattttggcctcctaagtacaaaaactacaattttggccc 22629567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 11662649 - 11662571
Alignment:
Q  321 taaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||| ||||||||||| ||||||||||| |||||||||||  | | ||| ||| |||||||| |||||||||||    
T  11662649 taaagtgcatttttccccccttaactttcaaaaacttgcaattttagctctctatgtacaaaaactataattttggccc 11662571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 398
Target Start/End: Original strand, 47369780 - 47369862
Alignment:
Q  317 aggctaaagtgcacttttcc-cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||| |||||||||   |||||||||||||||| |||||||||||  || | |||||| |||||||| |||||||||||    
T  47369780 aggctaaaatgcactttttttcccctaactttcaaaaacttgcaattttagcctcataagtacaaaaactataattttggccc 47369862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 393
Target Start/End: Complemental strand, 31661111 - 31661034
Alignment:
Q  317 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||||||||||| ||| | |||||||||||||  |||||||||||||||  || ||| |||||||| ||||||    
T  31661111 aggctaaagtgcactttcccctctctaactttcaaaaatttgcaattttgaccctttacgtacaaaaactataatttt 31661034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 399
Target Start/End: Complemental strand, 597383 - 597303
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 399  Q
    |||||||| ||||| ||||||||  |||||||||||| |||| |||||||| | | |||||| |||||||||||||||| ||||    
T  597383 taggctaatgtgcatttttcccc--taactttcaaaaacttgaaattttga-cgcataagtacaaaaactacaattttgaccct 597303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 318 - 396
Target Start/End: Original strand, 769413 - 769492
Alignment:
Q  318 ggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggc 396  Q
    |||||||||||| |||||| ||  ||| |||||||| ||||||||||||||  |||||||| ||||| || |||||||||    
T  769413 ggctaaagtgcaattttccacctgtaattttcaaaaacttgcaattttgacatcctaagtacaaaaattataattttggc 769492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 375
Target Start/End: Original strand, 14998005 - 14998067
Alignment:
Q  315 ataggctaaagtgcac--ttttcccccctaactttcaaaagcttgcaattttgaccccctaag 375  Q
    ||||||||||||||||  ||||  |||||||||||||||| ||| |||||||| |||||||||    
T  14998005 ataggctaaagtgcacctttttttcccctaactttcaaaaacttacaattttggccccctaag 14998067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 396
Target Start/End: Original strand, 43899470 - 43899525
Alignment:
Q  341 taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggc 396  Q
    |||||||||||| ||||||||||||| |  |||| |||||||| ||||||||||||    
T  43899470 taactttcaaaaacttgcaattttgatcttctaaatataaaaattacaattttggc 43899525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 46483610 - 46483551
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaag 375  Q
    |||| ||||||||||||||||||  ||||||| |||| |||| |||||||| ||||||||    
T  46483610 taggttaaagtgcacttttcccctttaacttttaaaaacttgtaattttgatcccctaag 46483551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 398
Target Start/End: Complemental strand, 20636923 - 20636841
Alignment:
Q  317 aggctaaagtgcacttttc-ccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||| |||||||  ||||||||  |||| ||||||||||||||  || |||||   ||||||||||||    
T  20636923 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctatttaaaaaaatggcaattttggccc 20636841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 398
Target Start/End: Complemental strand, 39182238 - 39182157
Alignment:
Q  317 aggctaaagtgcacttttc-ccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||| |||||||||| |||||||| ||| ||||  |||||||||||||||||| | || |||||  |||||||||||||    
T  39182238 aggctaaactgcacttttcgccccctaagtttaaaaatgttgcaattttgaccccct-attaaaaaaatgacaattttggccc 39182157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 27869195 - 27869252
Alignment:
Q  317 aggctaaagtgcacttttc-ccccctaactttcaaaagcttgcaattttgacccccta 373  Q
    ||||||||||||||||||| |||||||  ||||||||  |||| ||||||||||||||    
T  27869195 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgacccccta 27869252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 393
Target Start/End: Original strand, 34351511 - 34351568
Alignment:
Q  336 ccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    |||||| |||||||||| |||||||||||| | | | ||||||| |||||||||||||    
T  34351511 ccccctgactttcaaaaacttgcaattttggctctccaagtatagaaactacaatttt 34351568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 399
Target Start/End: Complemental strand, 34352897 - 34352805
Alignment:
Q  308 ataaattataggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 399  Q
    |||||||  |||||||||||||||||| | || |||| |||||||| ||| | ||||||  ||| |||||| | |||||| ||||||||||||    
T  34352897 ataaatttaaggctaaagtgcactttttcacctctaattttcaaaaactttctattttggtcccttaagtacataaactataattttggccct 34352805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 316 - 394
Target Start/End: Complemental strand, 16704600 - 16704521
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  16704600 taggctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 16704521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 1829701 - 1829623
Alignment:
Q  321 taaagtgcacttttc-ccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||  |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1829701 taaagtgcacttttttccccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttggccc 1829623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 315 - 398
Target Start/End: Original strand, 10784589 - 10784674
Alignment:
Q  315 ataggctaaagtgcacttttcccccc--taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||||| ||  ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  10784589 ataggctaaagtgcacttttccctcccttaacttttaaaaacttgcaattttaaccccctaagtataaaaactacaattttggccc 10784674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 27322173 - 27322093
Alignment:
Q  313 ttataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||  ||||| ||||||||    
T  27322173 ttataggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 27322093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 315 - 398
Target Start/End: Complemental strand, 7316398 - 7316314
Alignment:
Q  315 ataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||| |||  |||| |||||||||||||    
T  7316398 ataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaatattgaaaccacaattttggccc 7316314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 307 - 392
Target Start/End: Complemental strand, 8822905 - 8822819
Alignment:
Q  307 tataaattataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||| |||||||||||||||||||| | | ||||||||||| ||||||||||||||||||||||||  ||||| |||||||    
T  8822905 tataaattattggctaaagtgcacttttccctctttaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 8822819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 3721611 - 3721672
Alignment:
Q  317 aggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagta 377  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  3721611 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagta 3721672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 392
Target Start/End: Complemental strand, 3722610 - 3722533
Alignment:
Q  316 taggctaaagtgcacttttccc-ccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||  ||||| |||||||    
T  3722610 taggctaaagtgcacttttccctccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaattt 3722533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 392
Target Start/End: Original strand, 8659263 - 8659340
Alignment:
Q  316 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  8659263 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 8659340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 392
Target Start/End: Original strand, 8821871 - 8821948
Alignment:
Q  316 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  8821871 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 8821948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 313 - 392
Target Start/End: Complemental strand, 34834685 - 34834605
Alignment:
Q  313 ttataggctaaagtgcacttttccc-ccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| | ||||||||| ||||| |||||||    
T  34834685 ttataggttaaagtgcacttttccctccctaactttcaaaaacttgcaattttgatctcctaagtatcaaaaccacaattt 34834605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 398
Target Start/End: Original strand, 14822358 - 14822441
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||| |||||||||||| ||||| || |||||||| |||||||||||| |||| |||||||| ||||||||||||||||||    
T  14822358 taggctagagtgcacttttcaccccttaattttcaaaaacttgcaattttggccccataagtatagaaactacaattttggccc 14822441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 394
Target Start/End: Original strand, 7314880 - 7314956
Alignment:
Q  318 ggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||||| ||||| |||||||||    
T  7314880 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttg-gcccctaagtatcaaaacaacaattttg 7314956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 398
Target Start/End: Complemental strand, 26575150 - 26575074
Alignment:
Q  321 taaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||| || | ||||||||||||| ||||||||||| ||||| |||||| ||||||||||||||||||||    
T  26575150 taaagtgcacttt-cctctctaactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaattttggccc 26575074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 392
Target Start/End: Original strand, 27318312 - 27318389
Alignment:
Q  315 ataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||| ||| ||||||| ||||||||| |||||||||||| |||||||||||  ||||| |||||||    
T  27318312 ataggctaaagtgcaccttttccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 27318389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 8660305 - 8660230
Alignment:
Q  317 aggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattt 392  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||  ||||| |||||||    
T  8660305 aggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttga-cccctaagtaccaaaaccacaattt 8660230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 393
Target Start/End: Complemental strand, 6842386 - 6842308
Alignment:
Q  316 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    |||||||||||||||||||||||| |||| ||||||||  ||||||||||| ||||||| ||  |||||||||||||||    
T  6842386 taggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaatttt 6842308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 393
Target Start/End: Complemental strand, 10786000 - 10785938
Alignment:
Q  331 ttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||||||||||| ||||  |||||||||| |||||||||||| |||||||||||||||    
T  10786000 ttttcccccctaacttttaaaaatttgcaattttaaccccctaagtacaaaaactacaatttt 10785938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 394
Target Start/End: Original strand, 27437825 - 27437905
Alignment:
Q  315 ataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||||||||||| ||||| |||||| ||||  ||||||||||| |||||||   ||||||||||||||||||    
T  27437825 ataggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttg 27437905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 398
Target Start/End: Original strand, 17496791 - 17496878
Alignment:
Q  316 taggctaaagtgcacttttccccc-----ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||| |||||||||     ||||||||||||| ||| ||||||| |||| ||||||| ||||||| ||||||||||||    
T  17496791 taggctaaagtgcatttttccccctccccctaactttcaaaaacttacaattttaaccctctaagtacaaaaactgcaattttggccc 17496878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 398
Target Start/End: Complemental strand, 14823680 - 14823595
Alignment:
Q  315 ataggctaaagtgcactttt--cccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||  ||||| ||| ||| |||| |||||||||||  |||| |||||| | ||||||||||||||||||    
T  14823680 ataggctaaagtgcacttttttcccccttaattttaaaaaacttgcaattttagccccttaagtacagaaactacaattttggccc 14823595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 388
Target Start/End: Original strand, 26574617 - 26574690
Alignment:
Q  316 taggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactaca 388  Q
    |||||||||||||| ||| || || ||||||||||||| ||||||||||||| || ||||||| ||||||||||    
T  26574617 taggctaaagtgcaatttcccacctctaactttcaaaaacttgcaattttgaacctctaagtacaaaaactaca 26574690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 394
Target Start/End: Complemental strand, 12382811 - 12382735
Alignment:
Q  319 gctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||||||| || |||| ||| ||||  ||| |||||||||||||||||||| ||||||| |||||||    
T  12382811 gctaaagtgcacttttccacctctaatttttaaaaatttgtaattttgaccccctaagtattaaaactataattttg 12382735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 16703570 - 16703648
Alignment:
Q  318 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||| || ||||||||| |||||||||||||  || ||| || ||||||||||||||| ||||    
T  16703570 ggctaaagtgcacttttccccc-tatctttcaaaaacttgcaattttga-tccataaatacaaaaactacaattttagccc 16703648  T

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Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 396
Target Start/End: Original strand, 3333149 - 3333227
Alignment:
Q  318 ggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggc 396  Q
    |||||||||| ||||||||||  ||| ||| ||||  |||||| |||||||||||| | |||||||||| |||||||||    
T  3333149 ggctaaagtgaacttttcccctataagtttgaaaaaattgcaaatttgaccccctatgaataaaaactataattttggc 3333227  T

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Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 398
Target Start/End: Complemental strand, 30495807 - 30495718
Alignment:
Q  308 ataaattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||| | ||||||||||||||||| |||| ||||||||||||  |||| ||||| | |||||| ||| |||||  |||||||||||||    
T  30495807 ataaatttttggctaaagtgcactttttcccc-taactttcaaaaagttgcgattttaatcccctatgtacaaaaataacaattttggccc 30495718  T

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Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 375
Target Start/End: Complemental strand, 26717183 - 26717127
Alignment:
Q  320 ctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaag 375  Q
    ||||||||||||||||||||| ||| ||||| || ||||||||||||||||| ||||    
T  26717183 ctaaagtgcacttttccccccttaagtttcagaaacttgcaattttgaccccttaag 26717127  T

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Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 393
Target Start/End: Complemental strand, 3333137 - 3333051
Alignment:
Q  308 ataaattataggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||| || |||||||| |||||||||||||  |||| ||| ||||  |||| |||||| ||||||| ||| |||||||||||||||    
T  3333137 ataaagtaaaggctaaattgcacttttccccttctaagtttgaaaaagttgcgattttggccccctatgtacaaaaactacaatttt 3333051  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 393
Target Start/End: Complemental strand, 26949259 - 26949210
Alignment:
Q  341 taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||||||  |||||||||||  ||||||||||||||||||||||||||    
T  26949259 taactttcaaaaa-ttgcaattttg--cccctaagtataaaaactacaatttt 26949210  T

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Target: scaffold0320 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 316 - 394
Target Start/End: Original strand, 19486 - 19565
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    |||||||||||||| ||||||||||| || |||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  19486 taggctaaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaattttg 19565  T

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Target: scaffold0302 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 316 - 398
Target Start/End: Original strand, 17468 - 17551
Alignment:
Q  316 taggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||| |||||| |||||| |||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  17468 taggctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccc 17551  T

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Target: scaffold0302; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 398
Target Start/End: Complemental strand, 18877 - 18796
Alignment:
Q  318 ggctaaagtgcacttttcccc-cctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||| ||| ||||||||| ||||  |||||||||||  |||||| ||| |||||||| |||||||||||    
T  18877 ggctaaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttggccc 18796  T

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Target: scaffold0294 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 316 - 394
Target Start/End: Complemental strand, 5541 - 5462
Alignment:
Q  316 taggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  5541 taggctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttg 5462  T

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Target: scaffold0294; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 393
Target Start/End: Original strand, 4440 - 4518
Alignment:
Q  316 taggctaaagtgcac-ttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||||||||||| ||||||||||||| |||||||| ||| |||||||  |||| |||||| ||||| |||||||||    
T  4440 taggctaaagtgcacattttcccccctaattttcaaaaacttacaattttagccccttaagtacaaaaattacaatttt 4518  T

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Target: scaffold0019 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 318 - 394
Target Start/End: Original strand, 60090 - 60167
Alignment:
Q  318 ggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||||||||| || |||||||| |||| |||||||||||||||||||| ||||||||||||||||||||    
T  60090 ggctaaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttg 60167  T

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Target: scaffold0019; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 398
Target Start/End: Complemental strand, 61559 - 61479
Alignment:
Q  319 gctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||| |||| || |||||||| |||||||||||  ||||||||||| |||||||| |||||||||||    
T  61559 gctaaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataattttggccc 61479  T

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Target: scaffold1303 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 315 - 394
Target Start/End: Original strand, 1436 - 1516
Alignment:
Q  315 ataggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||||| |||||||||||| |||||||    
T  1436 ataggctaaagtgtacttttccccctctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttg 1516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 316 - 395
Target Start/End: Complemental strand, 3410 - 3331
Alignment:
Q  316 taggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    |||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| || ||| |||||||| ||||||||    
T  3410 taggctaaagtgcacttttccccccttactttcaaaaacttacaattttgaccccataggtacaaaaactataattttgg 3331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 398
Target Start/End: Complemental strand, 2564 - 2485
Alignment:
Q  319 gctaaagtgcacttttcccccctaactttcaaaag-cttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||| || ||||||||||    
T  2564 gctaaagtgcacttttccccc-taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccc 2485  T

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Target: scaffold0093; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 398
Target Start/End: Complemental strand, 7187 - 7108
Alignment:
Q  319 gctaaagtgcacttttcccccctaactttcaaaag-cttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||| || ||||||||||    
T  7187 gctaaagtgcacttttccccc-taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccc 7108  T

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Target: scaffold0283 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 4241 - 4197
Alignment:
Q  267 cattttgtaaggcatgattcaaacctcaacttagttgagttataa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  4241 cattttgtaaggcatgattcaaacctcaacttagttgagttataa 4197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 390
Target Start/End: Original strand, 23071 - 23152
Alignment:
Q  308 ataaattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaat 390  Q
    ||||||| | ||||||||||||||||||||| ||||||||||||| |||||||||||| ||| |||||||  ||||| |||||    
T  23071 ataaatttttggctaaagtgcacttttcccc-ctaactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaat 23152  T

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Target: scaffold0186; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 389
Target Start/End: Complemental strand, 23993 - 23919
Alignment:
Q  316 taggctaaagtgcacttttccc-ccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaa 389  Q
    |||||||||||||||||||  | ||||||||||||||| |||||||||||| | |||||| ||| ||||| ||||    
T  23993 taggctaaagtgcacttttttctccctaactttcaaaaacttgcaattttggctccctaaatatcaaaacaacaa 23919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 398
Target Start/End: Complemental strand, 220 - 139
Alignment:
Q  318 ggctaaagtgcacttttcccccc-taactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||||||||||||||||||| ||||||||||||  |||| |||||| ||||| | |||| ||||| |||||||||||||    
T  220 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccc 139  T

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Target: scaffold0112 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 37148 - 37228
Alignment:
Q  318 ggctaaagtgcacttttcccccctaactttcaaaagctt-gcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    |||||||||||||||||||||| || |||| ||||  || ||||||||||||||||||||| |||||| |||||||||||||    
T  37148 ggctaaagtgcacttttccccc-tatcttttaaaaaatttgcaattttgaccccctaagtacaaaaacaacaattttggccc 37228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 399
Target Start/End: Complemental strand, 4829 - 4749
Alignment:
Q  319 gctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccct 399  Q
    ||||||||||||||| || |||||||||| |||| | |||||||||| |||||||| || | |||||||||||||| ||||    
T  4829 gctaaagtgcactttccctccctaacttttaaaaacatgcaattttggccccctaaatacagaaactacaattttgaccct 4749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 393
Target Start/End: Original strand, 3695 - 3751
Alignment:
Q  337 cccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    |||||||||||||||| |||||||||||| |||||| |||| | |||||| ||||||    
T  3695 cccctaactttcaaaaacttgcaattttggccccctgagtaaagaaactataatttt 3751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 318 - 393
Target Start/End: Complemental strand, 49185 - 49109
Alignment:
Q  318 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||||| ||||||||||| |||| |||||| |||| |||||||||||| || ||||||||| ||||||||||||||    
T  49185 ggctaaattgcacttttccacccttaacttttaaaaacttgcaattttggcctcctaagtattaaaactacaatttt 49109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 394
Target Start/End: Complemental strand, 49537 - 49457
Alignment:
Q  315 ataggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||||||||||||||||||| ||||| |||||| ||||  ||||||||||| |||||||   ||||||||||||||||||    
T  49537 ataggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttg 49457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 233 - 311
Alignment:
Q  318 ggctaaagtgcacttttcccccct-aactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttgg 395  Q
    |||||||||||||||| ||||||| |||||||||||  |||||||||||  |||||| ||| |||||||| ||||||||    
T  233 ggctaaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttgg 311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 398
Target Start/End: Complemental strand, 9137 - 9046
Alignment:
Q  307 tataaattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttggccc 398  Q
    ||||||| |||||||||||||||||||| || ||| | ||||||||  |||  |||||  || |||| ||| ||||||||||||||||||||    
T  9137 tataaataataggctaaagtgcactttttcctccttaatttcaaaaagttgtgatttttgcctcctatgtacaaaaactacaattttggccc 9046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 393
Target Start/End: Original strand, 13183 - 13267
Alignment:
Q  308 ataaattataggctaaagtgcacttttcccccctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaatttt 393  Q
    ||||| || |||||||||||||||||| |||||||||||| ||||  |||  ||||||||| |||| |||  ||||||||||||||    
T  13183 ataaaataaaggctaaagtgcactttt-ccccctaactttgaaaaagttgtgattttgacctcctatgtacgaaaactacaatttt 13267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 308 - 394
Target Start/End: Complemental strand, 7526 - 7439
Alignment:
Q  308 ataaattataggctaaagtgcacttttccccc-ctaactttcaaaagcttgcaattttgaccccctaagtataaaaactacaattttg 394  Q
    ||||| || |||||||||||||||| |||||| |||| ||| ||||  || | |||||||||||||| ||| | ||||||||||||||    
T  7526 ataaaataaaggctaaagtgcacttgtccccctctaagtttgaaaaagttacgattttgaccccctatgtacagaaactacaattttg 7439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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